Clone Name | rbasd2f23 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LHX8_MOUSE (O35652) LIM/homeobox protein Lhx8 (LIM homeodomain L... | 33 | 1.6 | 2 | VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B) | 32 | 2.7 | 3 | VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A) | 31 | 5.9 | 4 | ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disinteg... | 30 | 7.7 |
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>LHX8_MOUSE (O35652) LIM/homeobox protein Lhx8 (LIM homeodomain Lhx7) (L3)| Length = 367 Score = 32.7 bits (73), Expect = 1.6 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +2 Query: 116 SSCGKHT*QTNLLKEGKGTEFHGALF*ERHRQSCCYCKLLVFYSHAFAVIASKTYTRAY 292 S CG+H T+ ++ KG +H A F +C CK + FA++ K R + Sbjct: 158 SRCGRHIHSTDWVRRAKGNVYHLACF------ACFSCKRQLSTGEEFALVEEKVLCRVH 210
>VCLB_GOSHI (P09801) Vicilin C72 precursor (Alpha-globulin B)| Length = 588 Score = 32.0 bits (71), Expect = 2.7 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%) Frame = -3 Query: 652 EQRLRATTKCQHH-----KVPARKKQCVDECHRREHHHPSRAACERK 527 +Q R +CQ H + P RK+QCV EC R +P R E + Sbjct: 118 QQSQRQFQECQQHCHQQEQRPERKQQCVRECRERYQENPWRREREEE 164
>VCLA_GOSHI (P09799) Vicilin GC72-A precursor (Alpha-globulin A)| Length = 605 Score = 30.8 bits (68), Expect = 5.9 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -3 Query: 628 KCQ-HHKVPARKKQCVDECHRREHHHPSRAACERKCSHWRDPTRKE 494 +CQ + P RK+QCV EC + P + E K WR+ +E Sbjct: 128 RCQWQEQRPERKQQCVKECREQYQEDPWKGERENK---WREEEEEE 170
>ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 19) (Meltrin beta) (Metalloprotease and disintegrin dentritic antigen marker) (MADDAM) Length = 956 Score = 30.4 bits (67), Expect = 7.7 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = +3 Query: 159 KEKEQSSMELSSRRGIANHAATASYWSFILTPLPS*LARRIRGRIYRSVYTR 314 +E E SS+ LS+ RGI +S S+++ PLP + + IYRS + + Sbjct: 121 RETELSSVTLSTCRGIRGLITVSSNLSYVIEPLPDSKGQHL---IYRSEHLK 169 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,051,979 Number of Sequences: 219361 Number of extensions: 1782037 Number of successful extensions: 4514 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4284 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4510 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 9951802875 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)