ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2f22 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 508 ggcttcttcctcatcagcagctcgacaagaatcacgccgaaactgtaaacatcgctcttc 567 ||||||||||| | || || || ||||| ||||| |||||||| |||||||| |||||| Sbjct: 58326 ggcttcttccttgttaggagttcaacaagtatcacaccgaaactataaacatcactcttc 58385 Query: 568 tcggttaat 576 ||||||||| Sbjct: 58386 tcggttaat 58394
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 508 ggcttcttcctcatcagcagctcgacaagaatcacgccgaaactgtaaacatcgctcttc 567 ||||||||||| | || || || ||||| ||||| |||||||| |||||||| |||||| Sbjct: 35057425 ggcttcttccttgttaggagttcaacaagtatcacaccgaaactataaacatcactcttc 35057484 Query: 568 tcggttaat 576 ||||||||| Sbjct: 35057485 tcggttaat 35057493 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 711610 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 711655 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||| ||||||||||||||||||| Sbjct: 28887784 ccgaagctgtaaacatcgctcttct 28887808 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||||||||| ||||||||||||| Sbjct: 6597453 ccgaaactgtacacatcgctcttct 6597429
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 508 ggcttcttcctcatcagcagctcgacaagaatcacgccgaaactgtaaacatcgctcttc 567 ||||||||||| | || || || ||||| ||||| |||||||| |||||||| |||||| Sbjct: 35147497 ggcttcttccttgttaggagttcaacaagtatcacaccgaaactataaacatcactcttc 35147556 Query: 568 tcggttaat 576 ||||||||| Sbjct: 35147557 tcggttaat 35147565 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 711608 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 711653 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||| ||||||||||||||||||| Sbjct: 28979206 ccgaagctgtaaacatcgctcttct 28979230 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||||||||| ||||||||||||| Sbjct: 6596666 ccgaaactgtacacatcgctcttct 6596642
>dbj|AK120279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049G18, full insert sequence Length = 3468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 532 acaagaatcacgccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| |||||||| |||||||| ||||||||||||||| Sbjct: 2921 acaagtatcacaccgaaactataaacatcactcttctcggttaat 2877
>ref|XM_466291.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1896 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 535 agaatcacgccgaaactgtaaacatcgctcttct 568 ||||||||||| || ||||||||||||||||||| Sbjct: 1114 agaatcacgccaaagctgtaaacatcgctcttct 1081
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 535 agaatcacgccgaaactgtaaacatcgctcttct 568 ||||||||||| || ||||||||||||||||||| Sbjct: 21495098 agaatcacgccaaagctgtaaacatcgctcttct 21495131 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 547 aaactgtaaacatcgctcttctcggttaa 575 |||||||| ||||||||||| |||||||| Sbjct: 34535575 aaactgtagacatcgctcttatcggttaa 34535603 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctctt 566 |||||||||||||||||||| Sbjct: 34741437 aaactgtaaacatcgctctt 34741418
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 535 agaatcacgccgaaactgtaaacatcgctcttct 568 ||||||||||| || ||||||||||||||||||| Sbjct: 90025 agaatcacgccaaagctgtaaacatcgctcttct 90058
>dbj|AK072522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132N04, full insert sequence Length = 1895 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 535 agaatcacgccgaaactgtaaacatcgctcttct 568 ||||||||||| || ||||||||||||||||||| Sbjct: 1113 agaatcacgccaaagctgtaaacatcgctcttct 1080
>gb|DQ177499.1| Triticum aestivum wall-associated kinase-like 2 (WAKL2) mRNA, complete cds, alternatively spliced Length = 2375 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| |||||||| |||||||||||||| Sbjct: 1987 acgccgaagctgtaaacgtcgctcttctcggt 1956
>ref|NM_101478.2| Arabidopsis thaliana WAKL6 (WALL ASSOCIATED KINASE-LIKE 6); kinase AT1G16110 (WAKL6) mRNA, complete cds Length = 2358 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctctt 566 ||||||||||||||||||||||| Sbjct: 1873 ccgaaactgtaaacatcgctctt 1851
>gb|AY088682.1| Arabidopsis thaliana clone 91835 mRNA, complete sequence Length = 514 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctctt 566 ||||||||||||||||||||||| Sbjct: 28 ccgaaactgtaaacatcgctctt 6
>dbj|AK118105.1| Arabidopsis thaliana At1g16110 mRNA for unknown protein, complete cds, clone: RAFL19-37-B13 Length = 2315 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctctt 566 ||||||||||||||||||||||| Sbjct: 1908 ccgaaactgtaaacatcgctctt 1886
>gb|AC010924.2|T24D18 Arabidopsis thaliana chromosome 1 BAC T24D18 sequence, complete sequence Length = 80442 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctctt 566 ||||||||||||||||||||||| Sbjct: 55657 ccgaaactgtaaacatcgctctt 55635
>gb|AY107551.1| Zea mays PCO090593 mRNA sequence Length = 798 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 540 cacgccgaaactgtaaacatcgctcttctcg 570 ||||||||| ||||| ||||||||||||||| Sbjct: 135 cacgccgaagctgtacacatcgctcttctcg 105
>gb|BT016811.1| Zea mays clone Contig644 mRNA sequence Length = 1660 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcg 570 |||||||| ||||||||||||| ||||||| Sbjct: 1136 acgccgaagctgtaaacatcgcacttctcg 1107
>gb|AF529043.1| Musa acuminata clone PTO-07 Pto-like serine/threonine kinase gene, partial cds Length = 337 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 591 agtactccggatccaagtagcc 612 |||||||||||||||||||||| Sbjct: 50 agtactccggatccaagtagcc 71
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 543 gccgaaactgtaaacatcgctcttct 568 ||||||||| |||||||||||||||| Sbjct: 10023220 gccgaaactataaacatcgctcttct 10023195
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 7155 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 7200
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 97491 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 97536
>dbj|AP006050.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021H05 Length = 159111 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 543 gccgaaactgtaaacatcgctcttct 568 ||||||||| |||||||||||||||| Sbjct: 96785 gccgaaactataaacatcgctcttct 96760
>dbj|AK104314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-A08, full insert sequence Length = 1574 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 857 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 812
>dbj|AK071309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085P06, full insert sequence Length = 1610 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 893 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 848
>dbj|AK058286.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E01, full insert sequence Length = 1638 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Minus Query: 523 agcagctcgacaagaatcacgccgaaactgtaaacatcgctcttct 568 |||||||||| || | ||||||||| ||||| ||||||||||||| Sbjct: 859 agcagctcgagcagcagcacgccgaagctgtagacatcgctcttct 814
>ref|NM_202582.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G14350 transcript variant AT3G14350.2 mRNA, complete cds Length = 2812 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 2117 aaactgtaaacatcgctcttc 2097
>ref|NM_202583.1| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G14350 transcript variant AT3G14350.3 mRNA, complete cds Length = 2596 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 1901 aaactgtaaacatcgctcttc 1881
>ref|NM_112293.3| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT3G14350 transcript variant AT3G14350.1 mRNA, complete cds Length = 2680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 1985 aaactgtaaacatcgctcttc 1965
>ref|NM_105440.1| Arabidopsis thaliana kinase/ protein binding / protein kinase AT1G67720 mRNA, complete cds Length = 3160 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctc 569 ||||| |||||||| |||||||||||||| Sbjct: 2537 acgccaaaactgtagacatcgctcttctc 2509
>ref|NM_118787.2| Arabidopsis thaliana kinase AT4G26540 mRNA, complete cds Length = 3485 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 548 aactgtaaacatcgctcttctcggt 572 |||| |||||||||||||||||||| Sbjct: 2914 aactataaacatcgctcttctcggt 2890
>ref|NM_124354.2| Arabidopsis thaliana kinase AT5G49760 mRNA, complete cds Length = 3416 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 2719 gtagtactctggatccaagtagccc 2695
>ref|NM_124356.1| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT5G49780 mRNA, complete cds Length = 3021 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 2568 gtagtactcaggatccaagtagccc 2544
>ref|NM_105359.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G66880 mRNA, complete cds Length = 4064 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| ||||||||||||||| ||||| Sbjct: 3461 ccgaagctgtagacatcgctcttctcgtttaat 3429
>ref|NM_119145.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT4G29990 mRNA, complete cds Length = 3334 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 2884 aagaaccaccccgaagctgtaaacatcactcttctcg 2848
>ref|NM_123837.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G44700 mRNA, complete cds Length = 3944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 549 actgtaaacatcgctcttctc 569 ||||||||||||||||||||| Sbjct: 3429 actgtaaacatcgctcttctc 3409
>ref|NM_187612.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1095 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||||||||| ||||||||||||| Sbjct: 806 ccgaaactgtacacatcgctcttct 782
>ref|XM_463531.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1941 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 540 cacgccgaaactgtaaacatcgctcttctcggt 572 ||||||||| ||||| || |||||||||||||| Sbjct: 1542 cacgccgaagctgtacacgtcgctcttctcggt 1510
>ref|NM_025945.2| Mus musculus polymerase (RNA) III (DNA directed) polypeptide D (Polr3d), mRNA Length = 1998 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 757 ccacctccatatcttcttcct 737
>gb|AF377946.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0031O09, complete sequence Length = 161339 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||| ||||||||||||||||||| Sbjct: 153039 ccgaagctgtaaacatcgctcttct 153063
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004P24, complete sequence Length = 137721 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcggt 572 ||||| ||||| ||||||||||||||||| Sbjct: 95723 ccgaagctgtagacatcgctcttctcggt 95751
>gb|AC147426.2| Oryza sativa chromosome 3 B1377B10 genomic sequence, complete sequence Length = 184366 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||| ||||||||||||||||||| Sbjct: 71079 ccgaagctgtaaacatcgctcttct 71103
>gb|BC016102.1| Mus musculus polymerase (RNA) III (DNA directed) polypeptide D, mRNA (cDNA clone MGC:27674 IMAGE:4911475), complete cds Length = 1998 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 757 ccacctccatatcttcttcct 737
>gb|AY518292.1| Arabidopsis thaliana strubbelig receptor family 7 (SRF7) mRNA, complete cds Length = 2459 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 2055 aaactgtaaacatcgctcttc 2035
>gb|AF083784.1| Arabidopsis thaliana clone sps825 unknown mRNA Length = 2984 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| ||||||||||||||| ||||| Sbjct: 2473 ccgaagctgtagacatcgctcttctcgtttaat 2441
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||||||||| ||||||||||||| Sbjct: 140215 ccgaaactgtacacatcgctcttct 140191
>gb|AC122268.5| Mus musculus BAC clone RP23-216B15 from 14, complete sequence Length = 207136 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 64940 ccacctccatatcttcttcct 64960
>gb|AY059761.1| Arabidopsis thaliana At1g67720 mRNA sequence Length = 3347 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctc 569 ||||| |||||||| |||||||||||||| Sbjct: 2707 acgccaaaactgtagacatcgctcttctc 2679
>gb|AY072139.1| Arabidopsis thaliana At3g14350 mRNA sequence Length = 2286 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 1880 aaactgtaaacatcgctcttc 1860
>emb|X97774.1|ATLRRPK A.thaliana mRNA for light represssible receptor protein kinase Length = 3334 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 2884 aagaaccaccccgaagctgtaaacatcactcttctcg 2848
>ref|NM_001030907.1| Gallus gallus similar to Calcipressin 3 (Down syndrome candidate region 1-like protein 2) (Myocyte-enriched calcineurin interacting protein 3) (MCIP3) (LOC419698), mRNA Length = 2872 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cttcttcctccacaacctgtt 414 ||||||||||||||||||||| Sbjct: 631 cttcttcctccacaacctgtt 651
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 5792 aagaaccaccccgaagctgtaaacatcactcttctcg 5828
>emb|AL161565.2|ATCHRIV65 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 65 Length = 198320 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 548 aactgtaaacatcgctcttctcggt 572 |||| |||||||||||||||||||| Sbjct: 92268 aactataaacatcgctcttctcggt 92292
>emb|AL078465.1|ATT15N24 Arabidopsis thaliana DNA chromosome 4, BAC clone T15N24 (ESSA project) Length = 92657 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 548 aactgtaaacatcgctcttctcggt 572 |||| |||||||||||||||||||| Sbjct: 24135 aactataaacatcgctcttctcggt 24159
>emb|AL050352.1|ATF27B13 Arabidopsis thaliana DNA chromosome 4, BAC clone F27B13 (ESSA project) Length = 98401 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 90719 aagaaccaccccgaagctgtaaacatcactcttctcg 90755
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 2963 aagaaccaccccgaagctgtaaacatcactcttctcg 2999
>emb|AL022223.3|ATM3E9 Arabidopsis thaliana DNA chromosome 4, P1 clone M3E9 (ESSA project) Length = 80677 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 548 aactgtaaacatcgctcttctcggt 572 |||| |||||||||||||||||||| Sbjct: 14140 aactataaacatcgctcttctcggt 14116
>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence Length = 203826 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 193311 ccacctccatatcttcttcct 193331
>emb|AJ720328.1| Gallus gallus mRNA for hypothetical protein, clone 15g5 Length = 2872 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cttcttcctccacaacctgtt 414 ||||||||||||||||||||| Sbjct: 631 cttcttcctccacaacctgtt 651
>dbj|AB199409.1| Streptococcus sanguinis gene for D-alanine:D-alanine ligase, partial cds, strain: 1128 Length = 292 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 agaaagccacgtgcttgaccacctc 388 |||||||||||| |||||||||||| Sbjct: 144 agaaagccacgtccttgaccacctc 120
>dbj|AB199404.1| Streptococcus sanguinis gene for D-alanine:D-alanine ligase, partial cds, strain: SK4 Length = 292 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 364 agaaagccacgtgcttgaccacctc 388 |||||||||||| |||||||||||| Sbjct: 144 agaaagccacgtccttgaccacctc 120
>dbj|AK156587.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830031M05 product:polymerase (RNA) III (DNA directed) polypeptide D, full insert sequence Length = 1992 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 733 ccacctccatatcttcttcct 713
>gb|AF436829.1|AF436829 Arabidopsis thaliana AT4g26540/M3E9_30 mRNA, complete cds Length = 3490 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 548 aactgtaaacatcgctcttctcggt 572 |||| |||||||||||||||||||| Sbjct: 2920 aactataaacatcgctcttctcggt 2896
>dbj|AK221242.1| Arabidopsis thaliana mRNA for receptor protein kinase-like, complete cds, clone: RAFL24-01-J08 Length = 3127 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 2578 gtagtactcaggatccaagtagccc 2554
>gb|BT006486.1| Arabidopsis thaliana At5g49760 gene, complete cds Length = 2862 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 2412 gtagtactctggatccaagtagccc 2388
>dbj|AK013165.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810426M17 product:BN51 PROTEIN homolog [Homo sapiens], full insert sequence Length = 1886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcct 402 ||||||||||||||||||||| Sbjct: 666 ccacctccatatcttcttcct 646
>gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653B10, complete sequence Length = 170392 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cacctccatatcttcttcctc 403 ||||||||||||||||||||| Sbjct: 94397 cacctccatatcttcttcctc 94377
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggt 572 ||||| ||||| ||||||||||||||||| Sbjct: 7721232 ccgaagctgtagacatcgctcttctcggt 7721204
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 540 cacgccgaaactgtaaacatcgctcttctcggt 572 ||||||||| ||||| || |||||||||||||| Sbjct: 38313860 cacgccgaagctgtacacgtcgctcttctcggt 38313828 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 28476847 acgccgaagctgtacacatcgctcttgtcggt 28476878
>emb|BX814972.1|CNS0AAM2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS21ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2117 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| ||||||||||||||| ||||| Sbjct: 1601 ccgaagctgtagacatcgctcttctcgtttaat 1569
>gb|DQ013355.1| Triticum aestivum wall-associated kinase-like 1 (WAKL1) gene, complete cds Length = 2411 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggt 572 ||||| |||||||| |||||||||||||| Sbjct: 1985 ccgaagctgtaaacgtcgctcttctcggt 1957
>emb|BX829494.1|CNS09ZX2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB17ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1321 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 798 gtagtactctggatccaagtagccc 774
>gb|AC013288.7|AC013288 Arabidopsis thaliana chromosome 1 BAC F4N21 genomic sequence, complete sequence Length = 96899 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| ||||||||||||||| ||||| Sbjct: 1882 ccgaagctgtagacatcgctcttctcgtttaat 1914
>gb|AC083891.4|AC083891 Arabidopsis thaliana chromosome 1 BAC T4O24 genomic sequence, complete sequence Length = 35116 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcggttaat 576 ||||| ||||| ||||||||||||||| ||||| Sbjct: 31210 ccgaagctgtagacatcgctcttctcgtttaat 31242
>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I, complete sequence Length = 114190 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 541 acgccgaaactgtaaacatcgctcttctc 569 ||||| |||||||| |||||||||||||| Sbjct: 53030 acgccaaaactgtagacatcgctcttctc 53058
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 540 cacgccgaaactgtaaacatcgctcttctcggt 572 ||||||||| ||||| || |||||||||||||| Sbjct: 74685 cacgccgaagctgtacacgtcgctcttctcggt 74653
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 547 aaactgtaaacatcgctcttctcggttaa 575 |||||||| ||||||||||| |||||||| Sbjct: 46515 aaactgtagacatcgctcttatcggttaa 46543
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 547 aaactgtaaacatcgctcttctcggttaa 575 |||||||| ||||||||||| |||||||| Sbjct: 2190 aaactgtagacatcgctcttatcggttaa 2218
>dbj|AK117123.1| Arabidopsis thaliana At5g49760 mRNA for putative receptor protein kinase, complete cds, clone: RAFL16-66-A16 Length = 3417 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 2719 gtagtactctggatccaagtagccc 2695
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5 Length = 71807 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 69647 gtagtactcaggatccaagtagccc 69623 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 589 gtagtactccggatccaagtagccc 613 ||||||||| ||||||||||||||| Sbjct: 57607 gtagtactctggatccaagtagccc 57583
>dbj|AB022220.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLN21 Length = 83906 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 547 aaactgtaaacatcgctcttc 567 ||||||||||||||||||||| Sbjct: 47730 aaactgtaaacatcgctcttc 47750
>dbj|AB016874.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K23L20 Length = 81729 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 actgtaaacatcgctcttctc 569 ||||||||||||||||||||| Sbjct: 11613 actgtaaacatcgctcttctc 11633
>dbj|AK119341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-D09, full insert sequence Length = 2853 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttctcggttaa 575 |||||||| ||||||||||| |||||||| Sbjct: 2393 aaactgtagacatcgctcttatcggttaa 2365
>dbj|AK111731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038I10, full insert sequence Length = 1883 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttct 568 ||||||||||| ||||||||||||| Sbjct: 1042 ccgaaactgtacacatcgctcttct 1018
>emb|X83614.1|ATBRPK A.thaliana BRPK gene Length = 6059 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctcg 570 ||||| ||| ||||| ||||||||||| ||||||||| Sbjct: 5732 aagaaccaccccgaagctgtaaacatcactcttctcg 5696
>emb|BX005054.7| Zebrafish DNA sequence from clone DKEY-209N16 in linkage group 6, complete sequence Length = 230686 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 agtagttggacaggttctgcttctc 484 |||||||||||||| |||||||||| Sbjct: 171206 agtagttggacaggctctgcttctc 171182
>gb|AF098940.1|AF098940 Macroptilium golden mosaic geminivirus strain Jamaica strain 1 replication associated protein (rep) and coat protein (cp) genes, partial cds Length = 1405 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 295 gcagcctcatctccacgtcct 315 ||||||||||||||||||||| Sbjct: 540 gcagcctcatctccacgtcct 520
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggt 572 ||||| ||||| ||||||||||||||||| Sbjct: 7791319 ccgaagctgtagacatcgctcttctcggt 7791291
>dbj|AP006863.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08G16, TM0934, complete sequence Length = 104894 Score = 42.1 bits (21), Expect = 2.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 525 cagctcgacaagaatcacgccgaaactgtaaacatcgctcttctc 569 |||||| | |||||| || ||||||||||||||||| | |||||| Sbjct: 86020 cagctccaaaagaatgaccccgaaactgtaaacatcacacttctc 85976
>emb|AL928710.6| Mouse DNA sequence from clone RP23-255P20 on chromosome 2, complete sequence Length = 180748 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 320 gctaggcctcttctgccttct 340 ||||||||||||||||||||| Sbjct: 111832 gctaggcctcttctgccttct 111852
>ref|NM_104110.2| Arabidopsis thaliana kinase AT1G52310 mRNA, complete cds Length = 1978 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttc 567 ||||||||||| |||||||||||| Sbjct: 1544 ccgaaactgtagacatcgctcttc 1521
>ref|NM_125967.3| Arabidopsis thaliana ATP binding / kinase/ protein serine/threonine kinase AT5G65700 mRNA, complete cds Length = 3380 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 2727 aagaaccacaccgaaactatacacatcgctcttctc 2692
>ref|NM_104058.3| Arabidopsis thaliana kinase AT1G51790 mRNA, complete cds Length = 2789 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaa 575 ||||||||||| ||||| |||||||| ||||| Sbjct: 2288 ccgaaactgtacacatcactcttctctgttaa 2257
>ref|NM_114461.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase AT3G45920 mRNA, complete cds Length = 709 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 209 ccgaaactgtagacatcactcttctcgg 182
>ref|NM_114500.2| Arabidopsis thaliana kinase AT3G46330 mRNA, complete cds Length = 2637 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 2267 ccgaaactgtagacatcactcttctcgg 2240
>ref|XM_636540.1| Dictyostelium discoideum hypothetical protein (DDB0205771), partial mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 gcttcttcctcatcagcagc 528 |||||||||||||||||||| Sbjct: 1760 gcttcttcctcatcagcagc 1741
>ref|XM_468341.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2295 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctctt 566 |||||||||||||||||||| Sbjct: 1880 aaactgtaaacatcgctctt 1861
>ref|NM_192128.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2064 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 1676 acgccgaagctgtacacatcgctcttgtcggt 1645
>gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, complete sequence Length = 83042 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 cggttaatcggcccgtgtgg 588 |||||||||||||||||||| Sbjct: 39258 cggttaatcggcccgtgtgg 39239
>gb|AY208917.2| Pseudomonas sp. ND6 plasmid pND6-1, complete sequence Length = 101858 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 569 cggttaatcggcccgtgtgg 588 |||||||||||||||||||| Sbjct: 79063 cggttaatcggcccgtgtgg 79044
>gb|BC063237.1| Danio rerio zgc:77816, mRNA (cDNA clone MGC:77816 IMAGE:7001543), complete cds Length = 3316 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cctgtttatccaccacctcc 428 |||||||||||||||||||| Sbjct: 353 cctgtttatccaccacctcc 334
>ref|XM_958196.1| Neurospora crassa OR74A hypothetical protein (NCU08417.1) partial mRNA Length = 4737 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcc 401 |||||||||||||||||||| Sbjct: 4084 ccacctccatatcttcttcc 4065
>ref|XM_329462.1| Neurospora crassa OR74A hypothetical protein (NCU08417.1) partial mRNA Length = 4737 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcc 401 |||||||||||||||||||| Sbjct: 4084 ccacctccatatcttcttcc 4065
>gb|AC115880.11| Mus musculus chromosome 9, clone RP24-365N15, complete sequence Length = 202851 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 325 gcctcttctgccttctcagg 344 |||||||||||||||||||| Sbjct: 62213 gcctcttctgccttctcagg 62232
>gb|AY444554.1| Sida mottle virus replication associated protein (rep) gene, partial cds Length = 693 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agcctcatctccacgtcctt 316 |||||||||||||||||||| Sbjct: 530 agcctcatctccacgtcctt 511
>gb|AC132428.3| Mus musculus BAC clone RP23-203K20 from chromosome 7, complete sequence Length = 194926 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tatctccttgccaacaattc 35 |||||||||||||||||||| Sbjct: 194711 tatctccttgccaacaattc 194692
>gb|AC126254.3| Mus musculus BAC clone RP24-132D17 from chromosome 17, complete sequence Length = 167995 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 attataggaggacatcataa 98 |||||||||||||||||||| Sbjct: 88780 attataggaggacatcataa 88799
>gb|AC068707.7| Homo sapiens chromosome 10 clone RP11-168L22, complete sequence Length = 169414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 atccaccacctcctctagag 435 |||||||||||||||||||| Sbjct: 39767 atccaccacctcctctagag 39748
>gb|BT008810.1| Arabidopsis thaliana At5g65700 gene, complete cds Length = 3012 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 2661 aagaaccacaccgaaactatacacatcgctcttctc 2626
>gb|BT008903.1| Arabidopsis thaliana At1g52310 mRNA, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttc 567 ||||||||||| |||||||||||| Sbjct: 1373 ccgaaactgtagacatcgctcttc 1350
>emb|AL355775.1|ATF12M12 Arabidopsis thaliana DNA chromosome 3, BAC clone F12M12 Length = 106730 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 106461 ccgaaactgtagacatcactcttctcgg 106488
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 78866 ccgaaactgtagacatcactcttctcgg 78839
>emb|AL133298.1|ATF18L15 Arabidopsis thaliana DNA chromosome 3, BAC clone F18L15 Length = 100328 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 7443 ccgaaactgtagacatcactcttctcgg 7470
>emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome 5, BAC clone F6H11 (ESSAII project) Length = 118086 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 82831 aagaaccacaccgaaactatacacatcgctcttctc 82866
>emb|BX511089.7| Zebrafish DNA sequence from clone DKEY-258P11 in linkage group 14, complete sequence Length = 136398 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 tatcttcttcctccacaacc 410 |||||||||||||||||||| Sbjct: 38429 tatcttcttcctccacaacc 38410
>ref|NM_200869.1| Danio rerio zgc:77816 (zgc:77816), mRNA Length = 3316 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cctgtttatccaccacctcc 428 |||||||||||||||||||| Sbjct: 353 cctgtttatccaccacctcc 334
>gb|AC120367.8| Mus musculus chromosome 7, clone RP24-325B21, complete sequence Length = 224814 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tatctccttgccaacaattc 35 |||||||||||||||||||| Sbjct: 83785 tatctccttgccaacaattc 83766
>gb|AC009695.7| Homo sapiens chromosome 8, clone RP11-130C12, complete sequence Length = 144328 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 agaatcgcagcctcatctcc 308 |||||||||||||||||||| Sbjct: 105631 agaatcgcagcctcatctcc 105612
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 cggttaatcggcccgtgtgg 588 |||||||||||||||||||| Sbjct: 1266222 cggttaatcggcccgtgtgg 1266241
>gb|AC165446.16| Medicago truncatula clone mth2-61p21, complete sequence Length = 135557 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 aagaatcacgccgaaactgtaaacatcg 561 |||||| ||||||| ||||||||||||| Sbjct: 115712 aagaatgacgccgagactgtaaacatcg 115739
>gb|AY099814.1| Arabidopsis thaliana receptor protein kinase-like protein (At5g65700) mRNA, complete cds Length = 3265 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 2713 aagaaccacaccgaaactatacacatcgctcttctc 2678
>gb|AC005315.3| Arabidopsis thaliana chromosome 2 clone T9I4 map mi54, complete sequence Length = 108393 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaa 575 ||||||||||| || |||||||||||| |||| Sbjct: 48836 ccgaaactgtagacgtcgctcttctcgtttaa 48805
>gb|AC090824.6| Homo sapiens chromosome 17, clone CTD-2532B14, complete sequence Length = 187161 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 ccacctccatatcttcttcc 401 |||||||||||||||||||| Sbjct: 44427 ccacctccatatcttcttcc 44408
>ref|XM_693457.1| PREDICTED: Danio rerio similar to Deoxyribonuclease gamma precursor (DNase gamma) (Deoxyribonuclease I-like 3) (DNase I homolog protein DHP2) (Liver and spleen DNase) (LS-DNase) (LSD) (LOC573782), partial mRNA Length = 490 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 cctgtttatccaccacctcc 428 |||||||||||||||||||| Sbjct: 134 cctgtttatccaccacctcc 115
>gb|AY062751.1| Arabidopsis thaliana protein kinase, putative (F19K6.8) mRNA, complete cds Length = 1978 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttc 567 ||||||||||| |||||||||||| Sbjct: 1544 ccgaaactgtagacatcgctcttc 1521
>gb|AC093117.2| Homo sapiens chromosome 1 clone RP11-86H7, complete sequence Length = 200426 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 cccccatagcccacaggaag 461 |||||||||||||||||||| Sbjct: 174108 cccccatagcccacaggaag 174127
>gb|AC010338.7| Homo sapiens chromosome 5 clone CTD-2007F2, complete sequence Length = 105838 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 catatcttcttcctccacaacctg 412 ||||||||||||| |||||||||| Sbjct: 14553 catatcttcttcccccacaacctg 14576
>gb|AC025505.11| Homo sapiens, clone RP11-651N3, complete sequence Length = 166426 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 ccacctccatatcttcttcc 401 |||||||||||||||||||| Sbjct: 77364 ccacctccatatcttcttcc 77383
>gb|AC010351.7| Homo sapiens chromosome 5 clone CTD-2022B6, complete sequence Length = 199200 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 catatcttcttcctccacaacctg 412 ||||||||||||| |||||||||| Sbjct: 191807 catatcttcttcccccacaacctg 191784
>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete sequence Length = 124511 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 544 ccgaaactgtaaacatcgctcttctcggttaa 575 ||||||||||| ||||| |||||||| ||||| Sbjct: 38510 ccgaaactgtacacatcactcttctctgttaa 38479
>emb|AJ557451.1|SMI557451 Sida micrantha mosaic virus segment A, complete genome, isolate A2B2 Length = 2675 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 agcctcatctccacgtcctt 316 |||||||||||||||||||| Sbjct: 2388 agcctcatctccacgtcctt 2369
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccgaaactgtaaacatcgc 562 |||||||||||||||||||| Sbjct: 25619104 gccgaaactgtaaacatcgc 25619085
>emb|BX831538.1|CNS0A28X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH13ZD07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2167 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 1640 aagaaccacaccgaaactatacacatcgctcttctc 1605
>gb|AC037424.10|AC037424 Arabidopsis thaliana chromosome 1 BAC F19K6 genomic sequence, complete sequence Length = 75948 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttc 567 ||||||||||| |||||||||||| Sbjct: 52897 ccgaaactgtagacatcgctcttc 52920
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 3286 acgccgaagctgtacacatcgctcttgtcggt 3317
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 191947 acgccgaagctgtacacatcgctcttgtcggt 191978
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctctt 566 |||||||||||||||||||| Sbjct: 59285 aaactgtaaacatcgctctt 59266
>dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MPA24 Length = 84440 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 534 aagaatcacgccgaaactgtaaacatcgctcttctc 569 ||||| ||| |||||||| || |||||||||||||| Sbjct: 36976 aagaaccacaccgaaactatacacatcgctcttctc 36941
>dbj|AK109696.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F01, full insert sequence Length = 1692 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccgaaactgtaaacatcgc 562 |||||||||||||||||||| Sbjct: 1050 gccgaaactgtaaacatcgc 1031
>dbj|AK105147.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-C03, full insert sequence Length = 570 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 547 aaactgtaaacatcgctcttctcggtta 574 ||||| |||||||||||||| ||||||| Sbjct: 82 aaactataaacatcgctcttgtcggtta 55
>dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086H03, full insert sequence Length = 2351 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 1711 acgccgaagctgtacacatcgctcttgtcggt 1680
>dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107H09, full insert sequence Length = 2419 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 1780 acgccgaagctgtacacatcgctcttgtcggt 1749
>dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B19, full insert sequence Length = 3864 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 541 acgccgaaactgtaaacatcgctcttctcggt 572 |||||||| ||||| ||||||||||| ||||| Sbjct: 3271 acgccgaagctgtacacatcgctcttgtcggt 3240
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 cggttaatcggcccgtgtgg 588 |||||||||||||||||||| Sbjct: 644444 cggttaatcggcccgtgtgg 644463
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gccgaaactgtaaacatcgc 562 |||||||||||||||||||| Sbjct: 25547280 gccgaaactgtaaacatcgc 25547261
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 547 aaactgtaaacatcgctcttctcggtta 574 ||||| |||||||||||||| ||||||| Sbjct: 84461 aaactataaacatcgctcttgtcggtta 84488
>emb|AL732537.4|CNS08C9C Oryza sativa chromosome 12, . BAC OSJNBa0036L12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127003 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 gccgaaactgtaaacatcgc 562 |||||||||||||||||||| Sbjct: 54614 gccgaaactgtaaacatcgc 54633
>gb|AC134604.5| Mus musculus BAC clone RP23-296I5 from 12, complete sequence Length = 203284 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 cctccatatcttcttcctcc 404 |||||||||||||||||||| Sbjct: 97066 cctccatatcttcttcctcc 97085
>gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 97451 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 544 ccgaaactgtaaacatcgctcttctcgg 571 ||||||||||| ||||| |||||||||| Sbjct: 12533 ccgaaactgtagacatcactcttctcgg 12560 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,612,595 Number of Sequences: 3902068 Number of extensions: 5612595 Number of successful extensions: 96064 Number of sequences better than 10.0: 146 Number of HSP's better than 10.0 without gapping: 154 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95344 Number of HSP's gapped (non-prelim): 720 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
