Clone Name | rbasd2f21 |
---|---|
Clone Library Name | barley_pub |
>GP157_MOUSE (Q8C206) Probable G-protein coupled receptor 157| Length = 330 Score = 31.6 bits (70), Expect = 1.8 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = -1 Query: 224 PVLLFLWENFVVVMSCAVERAN---LLHVRSLWPVGWRRRARQLL 99 P L WE VV++SCA+ L+ +LWP R RAR+LL Sbjct: 7 PTELLPWERAVVLLSCALSALGSGLLVATHALWP-DLRSRARRLL 50
>GP157_RAT (Q5FVG1) Probable G-protein coupled receptor 157| Length = 330 Score = 30.0 bits (66), Expect = 5.3 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = -1 Query: 224 PVLLFLWENFVVVMSC---AVERANLLHVRSLWPVGWRRRARQLL 99 P L WE VV++SC A+ L+ +LWP R RAR+LL Sbjct: 7 PTELLPWERAVVLLSCVLSALGSGLLVATHALWP-DLRSRARRLL 50
>Y1153_METTH (O27221) Hypothetical protein MTH1153| Length = 529 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = +1 Query: 154 SRFARSTAQDMTTTKFSHRKRSTGYLHALVIYGVVCSTETGSNTTK 291 SRF T +D T F+ + +GY +Y +V S E G+ TTK Sbjct: 52 SRFI--TIEDTKTAPFTKKTVGSGYSMRPDVYYIVASVELGNTTTK 95
>MASS1_BRARE (Q6JAN0) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) Length = 6199 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 141 SVACRVEKTCPAVARTCGDWNREAGPLLPFSSHCLYAKFYFS 16 SV VE+T PA+ DW E GPL+P + +FS Sbjct: 2705 SVTLLVERTAPAIGNVAVDWRIE-GPLVPTTFADTSGTLFFS 2745
>NPT2B_RAT (Q9JJ09) Sodium-dependent phosphate transport protein 2B| (Sodium/phosphate cotransporter 2B) (Na(+)/Pi cotransporter 2B) (Sodium-phosphate transport protein 2B) (Na(+)-dependent phosphate cotransporter 2B) (NaPi-2b) (Solute carrier family 34 me Length = 695 Score = 29.3 bits (64), Expect = 9.0 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -3 Query: 417 CCRDCAEVCGWMCCGLQRGRRGMELPRK 334 CCR C VCG CC + + +E K Sbjct: 625 CCRVCCMVCGCKCCRCSKCCKNLEEEEK 652
>DNMT2_MOUSE (O55055) DNA (cytosine-5)-methyltransferase-like protein 2 (Dnmt2)| (DNA methyltransferase homolog MmuIIP) (DNA MTase homolog MmuIIP) (M.MmuIIP) (Met-2) Length = 415 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = +1 Query: 457 QPFTVTVELQPQKSRGGVSLCNKSWAMKSQGRDT 558 Q + V E QP+ R G +C +S + +S G+DT Sbjct: 195 QKYAVVEESQPRVQRTGPRICAESSSTQSSGKDT 228 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,925,342 Number of Sequences: 219361 Number of extensions: 1689764 Number of successful extensions: 4620 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4492 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4619 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)