ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2f19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 155 bits (78), Expect = 1e-34 Identities = 210/254 (82%) Strand = Plus / Plus Query: 84 gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 143 ||||| |||||||||||||| |||||||| ||||||||||| || || |||| ||||||| Sbjct: 27341131 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 27341190 Query: 144 tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggccacgcgg 203 || || |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 27341191 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcctcccgg 27341250 Query: 204 ttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagctgcttcaccgcc 263 || ||| | ||| || ||||||||||| |||| || |||| | ||||||| || Sbjct: 27341251 ttgctcctgatctggctcaaagcgatctcgtaggcctcatcggacaaccgcttcacagcg 27341310 Query: 264 gagtcgatgtctagcgccagcttctccgacatggagttccgagccatcatccgcatgatc 323 | |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| Sbjct: 27341311 gtatcgatgtcctccgcgagcttctccgacatggagttccttgccatcatcctcatgatg 27341370 Query: 324 acgtccccgctctg 337 || || |||||||| Sbjct: 27341371 acatcgccgctctg 27341384 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 123 gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 182 |||| ||| |||| |||||||||||||| |||||||||||||||| |||||| ||||| Sbjct: 6712294 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 6712353 Query: 183 atcttgtccatggccacgcggttc 206 | || ||| ||||| |||||||| Sbjct: 6712354 agctggtcgatggcggcgcggttc 6712377 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 286 tctccgacatggagttccgagccatcatccgca 318 |||||||||||||| |||| |||| |||||||| Sbjct: 6712457 tctccgacatggagctccgggccagcatccgca 6712489
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 155 bits (78), Expect = 1e-34 Identities = 210/254 (82%) Strand = Plus / Plus Query: 84 gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 143 ||||| |||||||||||||| |||||||| ||||||||||| || || |||| ||||||| Sbjct: 83958 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 84017 Query: 144 tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggccacgcgg 203 || || |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 84018 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcctcccgg 84077 Query: 204 ttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagctgcttcaccgcc 263 || ||| | ||| || ||||||||||| |||| || |||| | ||||||| || Sbjct: 84078 ttgctcctgatctggctcaaagcgatctcgtaggcctcatcggacaaccgcttcacagcg 84137 Query: 264 gagtcgatgtctagcgccagcttctccgacatggagttccgagccatcatccgcatgatc 323 | |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| Sbjct: 84138 gtatcgatgtcctccgcgagcttctccgacatggagttccttgccatcatcctcatgatg 84197 Query: 324 acgtccccgctctg 337 || || |||||||| Sbjct: 84198 acatcgccgctctg 84211
>dbj|AK072047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G24, full insert sequence Length = 2183 Score = 155 bits (78), Expect = 1e-34 Identities = 210/254 (82%) Strand = Plus / Minus Query: 84 gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 143 ||||| |||||||||||||| |||||||| ||||||||||| || || |||| ||||||| Sbjct: 2009 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 1950 Query: 144 tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggccacgcgg 203 || || |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 1949 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcctcccgg 1890 Query: 204 ttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagctgcttcaccgcc 263 || ||| | ||| || ||||||||||| |||| || |||| | ||||||| || Sbjct: 1889 ttgctcctgatctggctcaaagcgatctcgtaggcctcatcggacaaccgcttcacagcg 1830 Query: 264 gagtcgatgtctagcgccagcttctccgacatggagttccgagccatcatccgcatgatc 323 | |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| Sbjct: 1829 gtatcgatgtcctccgcgagcttctccgacatggagttccttgccatcatcctcatgatg 1770 Query: 324 acgtccccgctctg 337 || || |||||||| Sbjct: 1769 acatcgccgctctg 1756
>dbj|AK064913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M12, full insert sequence Length = 2433 Score = 155 bits (78), Expect = 1e-34 Identities = 210/254 (82%) Strand = Plus / Minus Query: 84 gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 143 ||||| |||||||||||||| |||||||| ||||||||||| || || |||| ||||||| Sbjct: 2259 gggggaacccggttctcgacagggatctccgtgaactcggagagaatcgccctgaactcg 2200 Query: 144 tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggccacgcgg 203 || || |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2199 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcctcccgg 2140 Query: 204 ttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagctgcttcaccgcc 263 || ||| | ||| || ||||||||||| |||| || |||| | ||||||| || Sbjct: 2139 ttgctcctgatctggctcaaagcgatctcgtaggcctcatcggacaaccgcttcacagcg 2080 Query: 264 gagtcgatgtctagcgccagcttctccgacatggagttccgagccatcatccgcatgatc 323 | |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| Sbjct: 2079 gtatcgatgtcctccgcgagcttctccgacatggagttccttgccatcatcctcatgatg 2020 Query: 324 acgtccccgctctg 337 || || |||||||| Sbjct: 2019 acatcgccgctctg 2006
>dbj|AK060805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F12, full insert sequence Length = 2276 Score = 147 bits (74), Expect = 3e-32 Identities = 209/254 (82%) Strand = Plus / Minus Query: 84 gggggcacccggttctcgacggggatctcggtgaactcggacaggatggcccggaactcg 143 ||||| |||||||||||||| |||||||| ||| ||||||| || || |||| ||||||| Sbjct: 2069 gggggaacccggttctcgacagggatctccgtggactcggagagaatcgccctgaactcg 2010 Query: 144 tcgccgctcagcgtctccttctccaggagcacctccacgatcttgtccatggccacgcgg 203 || || |||| ||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 2009 tcaccactcaatgtctccttctcaaggagcacctccacgatcttgtccatggcctcccgg 1950 Query: 204 ttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagctgcttcaccgcc 263 || ||| | ||| || ||||||||||| |||| || |||| | ||||||| || Sbjct: 1949 ttgctcctgatctggctcaaagcgatctcgtaggcctcatcggacaaccgcttcacagcg 1890 Query: 264 gagtcgatgtctagcgccagcttctccgacatggagttccgagccatcatccgcatgatc 323 | |||||||| ||| |||||||||||||||||||||| |||||||||| |||||| Sbjct: 1889 gtatcgatgtcctccgcgagcttctccgacatggagttccttgccatcatcctcatgatg 1830 Query: 324 acgtccccgctctg 337 || || |||||||| Sbjct: 1829 acatcgccgctctg 1816
>gb|AY105892.1| Zea mays PCO103778 mRNA sequence Length = 2203 Score = 97.6 bits (49), Expect = 2e-17 Identities = 169/209 (80%) Strand = Plus / Minus Query: 132 gcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacgatcttgtcc 191 |||||||||||||| ||| ||| ||||||||||| | ||||||||| ||||| ||||| Sbjct: 1865 gcccggaactcgtctccggccagtgtctccttctcaatgagcacctcaacgattttgtcg 1806 Query: 192 atggccacgcggttctccctcacctgctgcagcgcgatctcgtatgcctggtccgacagc 251 |||||| | | ||| | || | ||| || ||||||||||| |||| || |||| | Sbjct: 1805 atggcctccctgttgtttctaatgtgcctcaatgcgatctcgtaggcctcatctgacaac 1746 Query: 252 tgcttcaccgccgagtcgatgtctagcgccagcttctccgacatggagttccgagccatc 311 |||||||| ||||| || ||||| ||| |||||||| ||||||||||||| |||||| Sbjct: 1745 tgcttcactgccgaatcaatgtcctccgcaagcttctctgacatggagttccttgccatc 1686 Query: 312 atccgcatgatcacgtccccgctctgtgc 340 || |||||||| |||||||| |||||||| Sbjct: 1685 attcgcatgatgacgtccccactctgtgc 1657
>gb|AY639668.1| Hordeum vulgare subsp. spontaneum cultivar PI 466529 FtsH-like protein gene, partial cds Length = 356 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 310 tcatccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||||||||||||||||||| Sbjct: 356 tcatccgcatgatcacgtccccgctctgtgcggcg 322
>gb|AY639667.1| Hordeum vulgare subsp. spontaneum cultivar PI 466625 FtsH-like protein gene, partial cds Length = 356 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 310 tcatccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||||||||||||||||||| Sbjct: 356 tcatccgcatgatcacgtccccgctctgtgcggcg 322
>gb|AY639665.1| Hordeum vulgare subsp. spontaneum cultivar PI 466252 FtsH-like protein gene, partial cds Length = 355 Score = 69.9 bits (35), Expect = 5e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 310 tcatccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||||||||||||||||||| Sbjct: 355 tcatccgcatgatcacgtccccgctctgtgcggcg 321
>gb|AY639673.1| Hordeum vulgare subsp. spontaneum cultivar PI 466631 FtsH-like protein gene, partial cds Length = 358 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctgtgcggcg 344 |||||||||||||||||||||||||||||||||| Sbjct: 358 catccgcatgatcacgtccccgctctgtgcggcg 325
>gb|AY639670.1| Hordeum vulgare subsp. spontaneum cultivar PI 282591 FtsH-like protein gene, partial cds Length = 355 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctgtgcggcg 344 |||||||||||||||||||||||||||||||||| Sbjct: 355 catccgcatgatcacgtccccgctctgtgcggcg 322
>gb|AY639666.1| Hordeum vulgare subsp. spontaneum cultivar PI 466684 FtsH-like protein gene, partial cds Length = 341 Score = 67.9 bits (34), Expect = 2e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctgtgcggcg 344 |||||||||||||||||||||||||||||||||| Sbjct: 341 catccgcatgatcacgtccccgctctgtgcggcg 308
>gb|AY639669.1| Hordeum vulgare subsp. spontaneum cultivar PI 420914 FtsH-like protein gene, partial cds Length = 355 Score = 65.9 bits (33), Expect = 8e-08 Identities = 33/33 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||||||||||||||||| Sbjct: 355 atccgcatgatcacgtccccgctctgtgcggcg 323
>gb|AY639680.1| Hordeum vulgare subsp. spontaneum cultivar PI 560558 FtsH-like protein gene, partial cds Length = 354 Score = 63.9 bits (32), Expect = 3e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctgtgcggcg 344 |||||||||||||||||||||||||||||||| Sbjct: 354 tccgcatgatcacgtccccgctctgtgcggcg 323
>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0425F05 Length = 162858 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 123 gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 182 |||| ||| |||| |||||||||||||| |||||||||||||||| |||||| ||||| Sbjct: 146420 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 146479 Query: 183 atcttgtccatggccacgcggttc 206 | || ||| ||||| |||||||| Sbjct: 146480 agctggtcgatggcggcgcggttc 146503 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 286 tctccgacatggagttccgagccatcatccgca 318 |||||||||||||| |||| |||| |||||||| Sbjct: 146583 tctccgacatggagctccgggccagcatccgca 146615
>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0525F01 Length = 151668 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 123 gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 182 |||| ||| |||| |||||||||||||| |||||||||||||||| |||||| ||||| Sbjct: 41973 gacaagatcgccctgaactcgtcgccgccgagcgtctccttctccatgagcacgtccacc 42032 Query: 183 atcttgtccatggccacgcggttc 206 | || ||| ||||| |||||||| Sbjct: 42033 agctggtcgatggcggcgcggttc 42056 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 286 tctccgacatggagttccgagccatcatccgca 318 |||||||||||||| |||| |||| |||||||| Sbjct: 42136 tctccgacatggagctccgggccagcatccgca 42168
>gb|AY639676.1| Hordeum vulgare subsp. spontaneum cultivar PI 227301 FtsH-like protein gene, partial cds Length = 357 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 310 tcatccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||| ||||||||||||||| Sbjct: 357 tcatccgcatgatcacgtctccgctctgtgcggcg 323
>gb|AY639672.1| Hordeum vulgare subsp. spontaneum cultivar PI 254894 FtsH-like protein gene, partial cds Length = 358 Score = 61.9 bits (31), Expect = 1e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 310 tcatccgcatgatcacgtccccgctctgtgc 340 ||||||||||||||||||||||||||||||| Sbjct: 358 tcatccgcatgatcacgtccccgctctgtgc 328
>gb|AY639677.1| Hordeum vulgare subsp. spontaneum cultivar PI 560560 FtsH-like protein gene, partial cds Length = 357 Score = 60.0 bits (30), Expect = 5e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctgtgc 340 |||||||||||||||||||||||||||||| Sbjct: 357 catccgcatgatcacgtccccgctctgtgc 328
>gb|AY639679.1| Hordeum vulgare subsp. spontaneum cultivar PI 220341 FtsH-like protein gene, partial cds Length = 356 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctgtgc 340 ||||||||||||||||||||||||||||| Sbjct: 356 atccgcatgatcacgtccccgctctgtgc 328
>gb|AY639678.1| Hordeum vulgare subsp. spontaneum cultivar PI 560560 FtsH-like protein gene, partial cds Length = 355 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctgtgc 340 ||||||||||||||||||||||||||||| Sbjct: 355 atccgcatgatcacgtccccgctctgtgc 327
>gb|AY639674.1| Hordeum vulgare subsp. spontaneum cultivar PI 466233 FtsH-like protein gene, partial cds Length = 352 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctgtgc 340 ||||||||||||||||||||||||||||| Sbjct: 352 atccgcatgatcacgtccccgctctgtgc 324
>gb|AY639671.1| Hordeum vulgare subsp. spontaneum cultivar PI 466265 FtsH-like protein gene, partial cds Length = 353 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||| ||||||||||||||| Sbjct: 353 atccgcatgatcacgtctccgctctgtgcggcg 321
>dbj|AK063733.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-E10, full insert sequence Length = 694 Score = 56.0 bits (28), Expect = 8e-05 Identities = 70/84 (83%) Strand = Plus / Minus Query: 123 gacaggatggcccggaactcgtcgccgctcagcgtctccttctccaggagcacctccacg 182 |||| ||| |||| |||||||||||||| |||||||||| ||||| |||||| ||||| Sbjct: 497 gacaagatcgccctgaactcgtcgccgccgagcgtctcctcctccatgagcacgtccacc 438 Query: 183 atcttgtccatggccacgcggttc 206 | || ||| ||||| |||||||| Sbjct: 437 agctggtcgatggcggcgcggttc 414 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 286 tctccgacatggagttccgagccatcatccgca 318 |||||||||||||| |||| |||| |||||||| Sbjct: 334 tctccgacatggagctccgggccagcatccgca 302
>gb|AY639686.1| Triticum urartu cultivar IG45443 FtsH-like protein gene, partial cds Length = 324 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||||| Sbjct: 324 catccgcatgatcacgtccccgctctg 298
>gb|AY639682.1| Aegilops tauschii cultivar KU2146 FtsH-like protein gene, partial cds Length = 338 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||||| Sbjct: 338 catccgcatgatcacgtccccgctctg 312
>gb|AY639675.1| Hordeum vulgare subsp. spontaneum cultivar PI 420915 FtsH-like protein gene, partial cds Length = 352 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 314 ccgcatgatcacgtccccgctctgtgcggcg 344 ||||||||||||||||||||| ||||||||| Sbjct: 352 ccgcatgatcacgtccccgctttgtgcggcg 322
>gb|AY639660.1| Lophopyrum elongatum FtsH-like protein gene, partial cds Length = 337 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 311 catccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||||| Sbjct: 337 catccgcatgatcacgtccccgctctg 311
>gb|AY639690.1| Triticum monococcum cultivar G4913 FtsH-like protein gene, partial cds Length = 337 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||||| Sbjct: 337 atccgcatgatcacgtccccgctctg 312
>gb|AY639688.1| Triticum urartu cultivar IG113242 FtsH-like protein gene, partial cds Length = 334 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||||| Sbjct: 334 atccgcatgatcacgtccccgctctg 309
>gb|AY639683.1| Triticum urartu cultivar IG113243 FtsH-like protein gene, partial cds Length = 334 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||||| Sbjct: 334 atccgcatgatcacgtccccgctctg 309
>gb|AY639662.1| Aegilops tauschii cultivar KU2030 FtsH-like protein gene, partial cds Length = 337 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||||| Sbjct: 337 atccgcatgatcacgtccccgctctg 312
>gb|AY639693.1| Triticum urartu cultivar IG45487 FtsH-like protein gene, partial cds Length = 333 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 333 tccgcatgatcacgtccccgctctg 309
>gb|AY639692.1| Aegilops tauschii cultivar KU2160 FtsH-like protein gene, partial cds Length = 335 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 335 tccgcatgatcacgtccccgctctg 311
>gb|AY639691.1| Aegilops tauschii cultivar KU2065 FtsH-like protein gene, partial cds Length = 336 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 336 tccgcatgatcacgtccccgctctg 312
>gb|AY639689.1| Triticum monococcum cultivar G2252 FtsH-like protein gene, partial cds Length = 336 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 336 tccgcatgatcacgtccccgctctg 312
>gb|AY639684.1| Aegilops tauschii cultivar KU2801 FtsH-like protein gene, partial cds Length = 337 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 337 tccgcatgatcacgtccccgctctg 313
>gb|AY639681.1| Triticum urartu cultivar IG45470 FtsH-like protein gene, partial cds Length = 334 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 334 tccgcatgatcacgtccccgctctg 310
>gb|AY639663.1| Triticum monococcum cultivar G1974 FtsH-like protein gene, partial cds Length = 335 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 313 tccgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||||| Sbjct: 335 tccgcatgatcacgtccccgctctg 311
>gb|AY639694.1| Aegilops tauschii cultivar KU2156 FtsH-like protein gene, partial cds Length = 334 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 314 ccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||| Sbjct: 334 ccgcatgatcacgtccccgctctg 311
>gb|AY639685.1| Triticum monococcum cultivar G1725 FtsH-like protein gene, partial cds Length = 320 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 314 ccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||| Sbjct: 320 ccgcatgatcacgtccccgctctg 297
>gb|AY639664.1| Triticum urartu cultivar IG45218 FtsH-like protein gene, partial cds Length = 331 Score = 48.1 bits (24), Expect = 0.019 Identities = 24/24 (100%) Strand = Plus / Minus Query: 314 ccgcatgatcacgtccccgctctg 337 |||||||||||||||||||||||| Sbjct: 331 ccgcatgatcacgtccccgctctg 308
>gb|AY639687.1| Triticum urartu cultivar IG45633 FtsH-like protein gene, partial cds Length = 334 Score = 46.1 bits (23), Expect = 0.074 Identities = 23/23 (100%) Strand = Plus / Minus Query: 315 cgcatgatcacgtccccgctctg 337 ||||||||||||||||||||||| Sbjct: 334 cgcatgatcacgtccccgctctg 312
>gb|AC121144.11| Mus musculus chromosome 3, clone RP24-202D19, complete sequence Length = 161989 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 acaagagcagcaacaacaaaaa 26 |||||||||||||||||||||| Sbjct: 41632 acaagagcagcaacaacaaaaa 41611
>gb|AY639661.1| Lophopyrum elongatum FtsH-like protein gene, partial cds Length = 337 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 312 atccgcatgatcacgtccccgctctg 337 |||||||||||||| ||||||||||| Sbjct: 337 atccgcatgatcacatccccgctctg 312
>emb|AL031289.1|HS739H11 Human DNA sequence from clone RP4-739H11 on chromosome 1p33-34.2 Contains the RIMS3 gene for regulating synaptic membrane exocytosis 3, a general transcription factor IIF, polypeptide 2, 30kDa (GTF2F2) pseudogene, a novel gene and the 5' end of the NFYC gene for nuclear transcription factor Y, gamma, complete sequence Length = 129950 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 158 ctccttctccaggagcacctcc 179 |||||||||||||||||||||| Sbjct: 127047 ctccttctccaggagcacctcc 127068
>dbj|AB236774.1| Trifolium pratense RNA for putative zinc dependent protease, complete cds, clone: C1597 Length = 2290 Score = 44.1 bits (22), Expect = 0.29 Identities = 37/42 (88%) Strand = Plus / Minus Query: 156 gtctccttctccaggagcacctccacgatcttgtccatggcc 197 |||||||||||||| || || ||||||||||| || |||||| Sbjct: 1992 gtctccttctccagtaggacttccacgatcttatcgatggcc 1951
>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the 5' end of the GRM4 gene for glutamate receptor metabotropic 4, keratin 18 pseudogene 1 (KRT18P1), a cytochrome c, somatic (CYCS) pseudogene, the HMGA1 gene for high mobility group AT-hook 1, a ribosomal protein L35 (RPL35) pseudogene, part of a novel gene and CpG islands, complete sequence Length = 151828 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 15 caacaacaaaaaactttccaa 35 ||||||||||||||||||||| Sbjct: 118862 caacaacaaaaaactttccaa 118882
>emb|BX649413.8| Mouse DNA sequence from clone RP23-193P21 on chromosome 4 Contains the 5' end of the Dbccr1 gene for deleted in bladder cancer 1, complete sequence Length = 186197 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaa 25 ||||||||||||||||||||| Sbjct: 92768 acaagagcagcaacaacaaaa 92788
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 gctcagcgtctccttctccag 169 ||||||||||||||||||||| Sbjct: 5692709 gctcagcgtctccttctccag 5692689
>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence Length = 182492 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 49803 acaagagcagcaacaacaaa 49784
>gb|AC158803.11| Mus musculus 10 BAC RP24-186E11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168941 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gcggttctccctcacctgct 219 |||||||||||||||||||| Sbjct: 88027 gcggttctccctcacctgct 88008
>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete sequence Length = 206456 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 123523 acaacagcagcaacaacaaaaaac 123546
>ref|XM_454238.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E06413g predicted mRNA Length = 3486 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 2205 acaagagcagcaacaacaaa 2224
>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence Length = 205429 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 ||||||||| |||||||||||||| Sbjct: 163435 acaagagcaacaacaacaaaaaac 163458
>ref|XM_390629.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10453.1) partial mRNA Length = 645 Score = 40.1 bits (20), Expect = 4.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 282 agcttctccgacatggagttccgagcca 309 ||||||||||||| ||| |||||||||| Sbjct: 409 agcttctccgacacggatttccgagcca 436
>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence Length = 166421 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ccttctccaggagcacctcc 179 |||||||||||||||||||| Sbjct: 65745 ccttctccaggagcacctcc 65726
>ref|XM_815304.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506459.270) partial mRNA Length = 3111 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tacaagagcagcaacaacaa 23 |||||||||||||||||||| Sbjct: 2336 tacaagagcagcaacaacaa 2355
>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence Length = 240151 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 ccttctccaggagcacctcc 179 |||||||||||||||||||| Sbjct: 95869 ccttctccaggagcacctcc 95850
>gb|AC124195.4| Mus musculus BAC clone RP23-285G17 from 16, complete sequence Length = 196102 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 73128 acaacagcagcaacaacaaaaaac 73151
>gb|AC158340.9| Mus musculus chromosome 1, clone RP24-161N8, complete sequence Length = 163123 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 54031 aagagcagcaacaacaaaaa 54012
>gb|AC102781.5| Mus musculus chromosome 1, clone RP23-271G2, complete sequence Length = 198393 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 195517 aagagcagcaacaacaaaaa 195536
>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17, complete sequence Length = 202430 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 56088 acaacagcagcaacaacaaaaaac 56111
>gb|AY143411.1| Buellia elegans internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2; partial sequence Length = 514 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 gagcagcaacaacaaaaaactttc 32 ||||||||||||| |||||||||| Sbjct: 182 gagcagcaacaacgaaaaactttc 205
>emb|AL354872.9| Human DNA sequence from clone RP11-42O15 on chromosome 1 Contains the CTH gene for cystathionase (cystathionine gamma-lyase) and a cysteine and histidine-rich domain (CHORD)-containing zinc binding protein 1 (CHORDC1) pseudogene, complete sequence Length = 151777 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 52534 aagagcagcaacaacaaaaa 52515
>gb|AY129673.1| Kluyveromyces lactis protein kinase C (PKC1) gene, complete cds Length = 4301 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 2811 acaagagcagcaacaacaaa 2830
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence Length = 196119 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 49815 acaacagcagcaacaacaaaaaac 49838
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 578950 acaagagcagcaacaacaaa 578931
>emb|AL645913.12| Mouse DNA sequence from clone RP23-194G14 on chromosome 11 Contains the 3' end of gene 9130006A14Rik, the 5' end of the Rnf130 gene for ring finger protein 130 and a CpG island, complete sequence Length = 131007 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 agcagcaacaacaaaaaact 29 |||||||||||||||||||| Sbjct: 39136 agcagcaacaacaaaaaact 39155
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agagcagcaacaacaaaaaa 27 |||||||||||||||||||| Sbjct: 56111 agagcagcaacaacaaaaaa 56092
>emb|AL589722.17| Mouse DNA sequence from clone RP23-169M24 on chromosome 13 Contains the gene for a novel protein similar to ribosomal protein S8 (Rps8) and a CpG island, complete sequence Length = 200125 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cagcaacaacaaaaaacttt 31 |||||||||||||||||||| Sbjct: 50071 cagcaacaacaaaaaacttt 50090
>gb|AC174824.3| Cavia porcellus clone CH234-33F4, complete sequence Length = 176892 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 43422 acaatagcagcaacaacaaaaaac 43445
>gb|AC099340.3| Homo sapiens BAC clone RP11-214O14 from 4, complete sequence Length = 164958 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 caacaacaaaaaactttcca 34 |||||||||||||||||||| Sbjct: 2046 caacaacaaaaaactttcca 2027
>dbj|AK046535.1| Mus musculus adult male adrenal gland cDNA, RIKEN full-length enriched library, clone:B330017C21 product:phosphodiesterase 10A, full insert sequence Length = 3676 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 acaagagcagcaacaacaaaaaac 28 |||| ||||||||||||||||||| Sbjct: 3650 acaacagcagcaacaacaaaaaac 3673
>gb|AC175674.2| Gallus gallus BAC clone CH261-137E22 from chromosome ul, complete sequence Length = 216348 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 gccgctcagcgtctccttct 165 |||||||||||||||||||| Sbjct: 173609 gccgctcagcgtctccttct 173628
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctccctcacctgctgcagcg 225 |||||||||||||||||||| Sbjct: 20571688 ctccctcacctgctgcagcg 20571707
>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete sequence Length = 215003 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 agcagcaacaacaaaaaact 29 |||||||||||||||||||| Sbjct: 129973 agcagcaacaacaaaaaact 129954
>gb|AC013406.7| Homo sapiens BAC clone RP11-341F20 from 2, complete sequence Length = 190018 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 caacaacaaaaaactttcca 34 |||||||||||||||||||| Sbjct: 166017 caacaacaaaaaactttcca 166036
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctccctcacctgctgcagcg 225 |||||||||||||||||||| Sbjct: 89335 ctccctcacctgctgcagcg 89354
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctccctcacctgctgcagcg 225 |||||||||||||||||||| Sbjct: 37346 ctccctcacctgctgcagcg 37365
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier, hypothetical protein, putative NAM protein, putative cis-zeatin O-glucosyltransferases, putative small nuclear ribonucleoprotein, putative cis-zeatin O-glucosyltransferase, putative glutathione peroxidase, putative copper-exporting ATPases, putative serine/threonine dehydratase, and putative actin depolymerizing factor genes, complete cds; and hypothetical protein gene, partial cds Length = 157237 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ctcggtgaactcggacagga 129 |||||||||||||||||||| Sbjct: 96283 ctcggtgaactcggacagga 96264 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 ctcggtgaactcggacagga 129 |||||||||||||||||||| Sbjct: 69455 ctcggtgaactcggacagga 69436
>gb|AY112063.1| Zea mays CL922_1 mRNA sequence Length = 860 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 242 gtccgacagctgcttcaccgccga 265 |||||||||||||| ||||||||| Sbjct: 321 gtccgacagctgctccaccgccga 298
>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205164 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 190975 aagagcagcaacaacaaaaa 190956
>gb|AC156506.4| Mus musculus 6 BAC RP24-266P6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 164284 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 138294 aagagcagcaacaacaaaaa 138313
>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete sequence Length = 257907 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 41717 acaagagcagcaacaacaaa 41698
>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete sequence Length = 181854 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 33622 aagagcagcaacaacaaaaa 33641
>gb|AC154313.2| Mus musculus BAC clone RP23-354M21 from chromosome 12, complete sequence Length = 220909 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 aagagcagcaacaacaaaaa 26 |||||||||||||||||||| Sbjct: 62249 aagagcagcaacaacaaaaa 62268
>gb|AC129214.5| Mus musculus BAC clone RP24-426N11 from 16, complete sequence Length = 191966 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 acaagagcagcaacaacaaa 24 |||||||||||||||||||| Sbjct: 98446 acaagagcagcaacaacaaa 98427
>emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chromosome X, complete sequence Length = 215390 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 agagcagcaacaacaaaaaa 27 |||||||||||||||||||| Sbjct: 34331 agagcagcaacaacaaaaaa 34312
>emb|AL806517.9| Mouse DNA sequence from clone RP23-20K17 on chromosome 4, complete sequence Length = 192432 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 agcagcaacaacaaaaaact 29 |||||||||||||||||||| Sbjct: 30644 agcagcaacaacaaaaaact 30625
>emb|AL592450.8| Mouse DNA sequence from clone RP23-282N6 on chromosome 1, complete sequence Length = 132639 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 agcagcaacaacaaaaaact 29 |||||||||||||||||||| Sbjct: 24716 agcagcaacaacaaaaaact 24735 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,699,322 Number of Sequences: 3902068 Number of extensions: 2699322 Number of successful extensions: 89842 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 92 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89585 Number of HSP's gapped (non-prelim): 257 length of query: 344 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 322 effective length of database: 17,147,199,772 effective search space: 5521398326584 effective search space used: 5521398326584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
