ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2f13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY133219.1| Oryza latifolia clone 78-2 pangrangja MITE elemen... 46 0.070
2gb|AY133218.1| Oryza grandiglumis clone 77-9 pangrangja MITE ele... 46 0.070
3gb|AY133216.1| Oryza alta clone 74-2 pangrangja MITE element, pa... 46 0.070
4gb|AY133214.1| Oryza alta clone 75-8 pangrangja MITE element, pa... 46 0.070
5gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, c... 46 0.070
6gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosom... 44 0.28
7gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosom... 44 0.28
8gb|AY112735.1| Bean common mosaic virus strain NL1, complete genome 44 0.28
9gb|DQ054364.1|DQ054364S1 Bean common mosaic virus polyprotein pr... 44 0.28
10gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosom... 42 1.1
11ref|XM_965355.1| PREDICTED: Tribolium castaneum similar to CG352... 42 1.1
12gb|AC090888.4| Homo sapiens chromosome 15 clone CTD-2014N11 map ... 42 1.1
13gb|U32996.1|HSMAP19 Human microtuble-associated protein-2 (MAP-2... 42 1.1
14dbj|AK142691.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 42 1.1
15gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map ... 42 1.1
16gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ... 42 1.1
17emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chro... 42 1.1
18gb|AC004398.1|AC004398 Homo sapiens Cosmid g5129z190, complete s... 42 1.1
19dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.1
20emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chr... 42 1.1
21ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (... 40 4.3
22ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (... 40 4.3
23gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 4.3
24gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 4.3
25gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 4.3
26ref|XM_596187.2| PREDICTED: Bos taurus similar to NM23-H8 (LOC51... 40 4.3
27emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in ... 40 4.3
28gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, comple... 40 4.3
29ref|XM_721459.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.3
30gb|CP000001.1| Bacillus cereus E33L, complete genome 40 4.3
31emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in... 40 4.3
32emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 ... 40 4.3
33gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, comp... 40 4.3
34gb|AC008428.5| Homo sapiens chromosome 5 clone CTC-308D9, comple... 40 4.3
35gb|BC110179.1| Bos taurus cDNA clone MGC:133838 IMAGE:8059306, c... 40 4.3
36gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 40 4.3
37emb|CR628405.8| Zebrafish DNA sequence from clone CH211-170A5 in... 40 4.3
38emb|BX571817.14| Zebrafish DNA sequence from clone DKEY-287H13 i... 40 4.3
39emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in... 40 4.3
40emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in... 40 4.3
41gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 4.3
42gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 4.3
43gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 40 4.3
44emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chr... 40 4.3
45gb|U34972.1|PSU34972 Peanut stripe virus mRNA polyprotein mRNA, ... 40 4.3
46dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 4.3
47gb|U05771.1|PSU05771 Peanut stripe virus, complete genome 40 4.3
48emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 40 4.3 
>gb|AY133219.1| Oryza latifolia clone 78-2 pangrangja MITE element, partial
           sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 191 tgcttttctcgcaacagtaatca 213
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133218.1| Oryza grandiglumis clone 77-9 pangrangja MITE element, partial
           sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 191 tgcttttctcgcaacagtaatca 213
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133216.1| Oryza alta clone 74-2 pangrangja MITE element, partial sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 191 tgcttttctcgcaacagtaatca 213
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AY133214.1| Oryza alta clone 75-8 pangrangja MITE element, partial sequence
          Length = 458

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 191 tgcttttctcgcaacagtaatca 213
           |||||||||||||||||||||||
Sbjct: 274 tgcttttctcgcaacagtaatca 252
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>gb|AC090699.10| Homo sapiens chromosome 17, clone RP11-794C22, complete sequence
          Length = 138379

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 156    tcaagaaaataaagaaaaaatctggta 182
              ||||||||| |||||||||||||||||
Sbjct: 123732 tcaagaaaaaaaagaaaaaatctggta 123706
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>gb|AC133078.3| Mus musculus BAC clone RP24-444O21 from chromosome 10, complete sequence
          Length = 141420

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 161    aaaataaagaaaaaatctggta 182
              ||||||||||||||||||||||
Sbjct: 102767 aaaataaagaaaaaatctggta 102746
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>gb|AC123028.4| Mus musculus BAC clone RP24-553H21 from chromosome 10, complete sequence
          Length = 175143

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 161    aaaataaagaaaaaatctggta 182
              ||||||||||||||||||||||
Sbjct: 130799 aaaataaagaaaaaatctggta 130820
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>gb|AY112735.1| Bean common mosaic virus strain NL1, complete genome
          Length = 10054

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 211  tcagttatgcacatatatgata 232
            ||||||||||||||||||||||
Sbjct: 3723 tcagttatgcacatatatgata 3744
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>gb|DQ054364.1|DQ054364S1 Bean common mosaic virus polyprotein precursor, gene, partial cds
          Length = 4537

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 211  tcagttatgcacatatatgata 232
            ||||||||||||||||||||||
Sbjct: 3077 tcagttatgcacatatatgata 3098
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>gb|AC149215.3| Mus musculus BAC clone RP24-201G21 from chromosome 7, complete sequence
          Length = 174164

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 159   agaaaataaagaaaaaatctg 179
             |||||||||||||||||||||
Sbjct: 84572 agaaaataaagaaaaaatctg 84592
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>ref|XM_965355.1| PREDICTED: Tribolium castaneum similar to CG3523-PA (LOC659016), mRNA
          Length = 6468

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 157  caagaaaataaagaaaaaatc 177
            |||||||||||||||||||||
Sbjct: 6118 caagaaaataaagaaaaaatc 6138
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>gb|AC090888.4| Homo sapiens chromosome 15 clone CTD-2014N11 map 15q21.1, complete
             sequence
          Length = 140589

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     tttgtatctttacatatatat 24
             |||||||||||||||||||||
Sbjct: 67429 tttgtatctttacatatatat 67449
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>gb|U32996.1|HSMAP19 Human microtuble-associated protein-2 (MAP-2) gene, exon 19
          Length = 3814

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  aagaaaataaagaaaaaatct 178
            |||||||||||||||||||||
Sbjct: 1449 aagaaaataaagaaaaaatct 1429
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>dbj|AK142691.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830006E18 product:unclassifiable, full
           insert sequence
          Length = 3310

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 taatcagttatgcacatatat 228
           |||||||||||||||||||||
Sbjct: 677 taatcagttatgcacatatat 657
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>gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map 15q15, complete
             sequence
          Length = 181312

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 4     tttgtatctttacatatatat 24
             |||||||||||||||||||||
Sbjct: 15983 tttgtatctttacatatatat 16003
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>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete
             sequence
          Length = 239189

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 5     ttgtatctttacatatatatactga 29
             ||||||||| |||||||||||||||
Sbjct: 71636 ttgtatcttaacatatatatactga 71612
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>emb|BX546504.9| Mouse DNA sequence from clone RP23-78N22 on chromosome X, complete
             sequence
          Length = 107447

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 5     ttgtatctttacatatatatactga 29
             ||||||||| |||||||||||||||
Sbjct: 22773 ttgtatcttaacatatatatactga 22749
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>gb|AC004398.1|AC004398 Homo sapiens Cosmid g5129z190, complete sequence
          Length = 42304

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   tcaagaaaataaagaaaaaat 176
             |||||||||||||||||||||
Sbjct: 13445 tcaagaaaataaagaaaaaat 13425
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
              complete sequence
          Length = 127049

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    aattgcatgcttttctcgcaa 204
              |||||||||||||||||||||
Sbjct: 100305 aattgcatgcttttctcgcaa 100325
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>emb|AL671338.15| Mouse DNA sequence from clone RP23-113J9 on chromosome 4, complete
              sequence
          Length = 172327

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    taatcagttatgcacatatat 228
              |||||||||||||||||||||
Sbjct: 152433 taatcagttatgcacatatat 152453
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>ref|XM_639626.1| Dictyostelium discoideum hypothetical protein (DDB0168059), partial
            mRNA
          Length = 6147

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  ggttcaagaaaataaagaaa 172
            ||||||||||||||||||||
Sbjct: 6063 ggttcaagaaaataaagaaa 6082
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>ref|XM_639440.1| Dictyostelium discoideum hypothetical protein (DDB0217329), partial
            mRNA
          Length = 6147

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 153  ggttcaagaaaataaagaaa 172
            ||||||||||||||||||||
Sbjct: 6063 ggttcaagaaaataaagaaa 6082
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1579335 caagaaaataaagaaaaaat 1579354
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1553185 caagaaaataaagaaaaaat 1553204
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1553139 caagaaaataaagaaaaaat 1553158
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>ref|XM_596187.2| PREDICTED: Bos taurus similar to NM23-H8 (LOC518005), mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 gttcaagaaaataaagaaaaaatc 177
           |||||||||| |||||||||||||
Sbjct: 508 gttcaagaaattaaagaaaaaatc 531
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>emb|CR853302.11| Zebrafish DNA sequence from clone DKEY-91M3 in linkage group 11,
             complete sequence
          Length = 231837

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aagaaaataaagaaaaaatc 177
             ||||||||||||||||||||
Sbjct: 21240 aagaaaataaagaaaaaatc 21221
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>gb|AC114817.3| Mus musculus BAC clone RP23-28O15 from 14, complete sequence
          Length = 211624

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 161    aaaataaagaaaaaatctggtaca 184
              ||||||||||||||| ||||||||
Sbjct: 146094 aaaataaagaaaaaacctggtaca 146071
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>ref|XM_721459.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05985)
           partial mRNA
          Length = 586

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 156 tcaagaaaataaagaaaaaa 175
           ||||||||||||||||||||
Sbjct: 54  tcaagaaaataaagaaaaaa 73
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1577951 caagaaaataaagaaaaaat 1577970
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>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1,
              complete sequence
          Length = 163635

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    aaaaatctggtacaattgcatgct 194
              ||||||||||||||||| ||||||
Sbjct: 124764 aaaaatctggtacaatttcatgct 124741
to top
>emb|AL031684.14|HS917N8 Human DNA sequence from clone RP5-917N8 on chromosome 20p11.22-12.1
            Contains STSs and GSSs, complete sequence
          Length = 143712

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 132  aataaaaatagctagcagta 151
            ||||||||||||||||||||
Sbjct: 7035 aataaaaatagctagcagta 7054
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>gb|AC091976.2| Homo sapiens chromosome 5 clone RP11-528F16, complete sequence
          Length = 175529

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   caagaaaataaagaaaaaat 176
             ||||||||||||||||||||
Sbjct: 46210 caagaaaataaagaaaaaat 46191
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>gb|AC008428.5| Homo sapiens chromosome 5 clone CTC-308D9, complete sequence
          Length = 148069

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  caagaaaataaagaaaaaat 176
            ||||||||||||||||||||
Sbjct: 6620 caagaaaataaagaaaaaat 6639
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>gb|BC110179.1| Bos taurus cDNA clone MGC:133838 IMAGE:8059306, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 154 gttcaagaaaataaagaaaaaatc 177
           |||||||||| |||||||||||||
Sbjct: 610 gttcaagaaattaaagaaaaaatc 633
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>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    ggttcaagaaaataaagaaa 172
              ||||||||||||||||||||
Sbjct: 311782 ggttcaagaaaataaagaaa 311801
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>emb|CR628405.8| Zebrafish DNA sequence from clone CH211-170A5 in linkage group 10,
            complete sequence
          Length = 75121

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 2    cgtttgtatctttacatatatata 25
            ||||||||| ||||||||||||||
Sbjct: 3558 cgtttgtatgtttacatatatata 3581
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>emb|BX571817.14| Zebrafish DNA sequence from clone DKEY-287H13 in linkage group 18,
              complete sequence
          Length = 167381

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    gtaatcagttatgcacatat 226
              ||||||||||||||||||||
Sbjct: 160985 gtaatcagttatgcacatat 161004
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>emb|BX294670.6| Zebrafish DNA sequence from clone CH211-154O6 in linkage group 16,
             complete sequence
          Length = 199070

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 162   aaataaagaaaaaatctggt 181
             ||||||||||||||||||||
Sbjct: 58106 aaataaagaaaaaatctggt 58087
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>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete
              sequence
          Length = 167207

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 171    aaaaatctggtacaattgcatgct 194
              ||||||||||||||||| ||||||
Sbjct: 144049 aaaaatctggtacaatttcatgct 144026
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>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1570554 caagaaaataaagaaaaaat 1570573
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1553062 caagaaaataaagaaaaaat 1553081
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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     caagaaaataaagaaaaaat 176
               ||||||||||||||||||||
Sbjct: 1678918 caagaaaataaagaaaaaat 1678937
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>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete
             sequence
          Length = 108612

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 157   caagaaaataaagaaaaaat 176
             ||||||||||||||||||||
Sbjct: 73584 caagaaaataaagaaaaaat 73603
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>gb|U34972.1|PSU34972 Peanut stripe virus mRNA polyprotein mRNA, complete cds
          Length = 10086

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  aatcagttatgcacatatatgata 232
            ||||||||||| ||||||||||||
Sbjct: 3723 aatcagttatgtacatatatgata 3746
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>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017,
             complete sequence
          Length = 121127

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   agaaaataaagaaaaaatct 178
             ||||||||||||||||||||
Sbjct: 27022 agaaaataaagaaaaaatct 27041
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>gb|U05771.1|PSU05771 Peanut stripe virus, complete genome
          Length = 10056

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 209  aatcagttatgcacatatatgata 232
            ||||||||||| ||||||||||||
Sbjct: 3723 aatcagttatgtacatatatgata 3746
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>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 223   atatatgatagacacaattt 242
             ||||||||||||||||||||
Sbjct: 79993 atatatgatagacacaattt 80012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,302,273
Number of Sequences: 3902068
Number of extensions: 4302273
Number of successful extensions: 108521
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108097
Number of HSP's gapped (non-prelim): 424
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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