ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2f08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 1249 bits (630), Expect = 0.0 Identities = 630/630 (100%) Strand = Plus / Minus Query: 77 caagcagagaaacccacaagaagtcaccttaactttctctgtaactgtaacactcactgt 136 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 caagcagagaaacccacaagaagtcaccttaactttctctgtaactgtaacactcactgt 1050 Query: 137 aacaatcaaatccatggtaaaatgtacttacatgggaaatgagccaacgtgtgtccgtct 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 aacaatcaaatccatggtaaaatgtacttacatgggaaatgagccaacgtgtgtccgtct 990 Query: 197 cgctccaatcgaatggacaaacaagaacaccaacgacgaggagggaaggaaggaagaaga 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 cgctccaatcgaatggacaaacaagaacaccaacgacgaggagggaaggaaggaagaaga 930 Query: 257 aagtgatgatggatcagttgcggcgggagcactcggcggggaagccgttggggaagcgcc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 aagtgatgatggatcagttgcggcgggagcactcggcggggaagccgttggggaagcgcc 870 Query: 317 agccgtcggtgcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccga 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 agccgtcggtgcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccga 810 Query: 377 gggctttggcgtcgagctccgtgctcatccaggcgtcgctgccggcggggcacgcggagg 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 gggctttggcgtcgagctccgtgctcatccaggcgtcgctgccggcggggcacgcggagg 750 Query: 437 agccgccgttgctgacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcg 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 agccgccgttgctgacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcg 690 Query: 497 cctgggtccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccaga 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 cctgggtccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccaga 630 Query: 557 gcgtggcgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttga 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gcgtggcgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttga 570 Query: 617 acgtcctcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatct 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 acgtcctcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatct 510 Query: 677 tgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||||||||| Sbjct: 509 tgtaggtgtggaagtcggcggtggggtcga 480 Score = 101 bits (51), Expect = 3e-18 Identities = 53/54 (98%) Strand = Plus / Minus Query: 1 ttatttataatttattatggtttgttnatacatacataaccgatcgatcacatg 54 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1181 ttatttataatttattatggtttgttcatacatacataaccgatcgatcacatg 1128
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 781 bits (394), Expect = 0.0 Identities = 415/422 (98%) Strand = Plus / Minus Query: 285 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 831 Query: 345 gtacttgctctcggcccaggcgacggtgccgagggctttggcgtcgagctccgtgctcat 404 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| Sbjct: 830 gtacttgctctcggcccaggcgacggtgccgagggccttgccgtcgagctccgtgttcat 771 Query: 405 ccaggcgtcgctgccggcggggcacgcggaggagccgccgttgctgacgcagccgttgga 464 ||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 770 ccacgcgtcgctgccggcggggcaggccgaggagccgccgttgctgacgcagccgttgga 711 Query: 465 ggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtcgatcttgacgtcgcc 524 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 ggagtagccgcggtagttgacgacgaagggcgcctgggtccagtcgatcttgacgtcgcc 651 Query: 525 gtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggct 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 gtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggct 591 Query: 585 gctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggcacgtcgtccacctg 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggcacgtcgtccacctg 531 Query: 645 gaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 gaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtc 471 Query: 705 ga 706 || Sbjct: 470 ga 469 Score = 54.0 bits (27), Expect = 6e-04 Identities = 40/44 (90%), Gaps = 4/44 (9%) Strand = Plus / Minus Query: 182 aacgtgtgtccgtctcgctccaatcgaatggacaaacaagaaca 225 ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 984 aacgtgtgtccgtctcg----aatcgaatggacaaacaagaaca 945
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 741 bits (374), Expect = 0.0 Identities = 410/422 (97%) Strand = Plus / Minus Query: 285 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 890 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 831 Query: 345 gtacttgctctcggcccaggcgacggtgccgagggctttggcgtcgagctccgtgctcat 404 |||||||||||||||||||||||||||||||||||| ||| |||||||||| ||| |||| Sbjct: 830 gtacttgctctcggcccaggcgacggtgccgagggccttgccgtcgagctctgtgttcat 771 Query: 405 ccaggcgtcgctgccggcggggcacgcggaggagccgccgttgctgacgcagccgttgga 464 ||| ||||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 770 ccacgcgtcgctgccggcggggcacgccgacgagccgccgttgctgacgcagccattgga 711 Query: 465 ggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtcgatcttgacgtcgcc 524 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 710 ggagtagccgcggtagttgacgacgaagggcgcctggctccagtcgatcttgacgtcgcc 651 Query: 525 gtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggct 584 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 650 gtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatgggctggct 591 Query: 585 gctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggcacgtcgtccacctg 644 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 590 gctcgggtacggcaggtcgtcgtacttcttgaaggtcctcaccggcacgtcgtccacctg 531 Query: 645 gaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtc 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 gaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtc 471 Query: 705 ga 706 || Sbjct: 470 ga 469
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 716 bits (361), Expect = 0.0 Identities = 426/447 (95%), Gaps = 3/447 (0%) Strand = Plus / Minus Query: 260 tgatgatggatcagttgcggcgggagcactcggcggggaagccgttggggaagcgccagc 319 |||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| Sbjct: 911 tgatgatggatcagttgcgg---gtgcactcggcggggaatccgttggggaagcgccagc 855 Query: 320 cgtcggtgcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgaggg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 854 cgtcggtgcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgaggg 795 Query: 380 ctttggcgtcgagctccgtgctcatccaggcgtcgctgccggcggggcacgcggaggagc 439 | ||| || ||||||||||| ||||||| ||||||||||||||||||||||| || |||| Sbjct: 794 ccttgccgccgagctccgtgttcatccacgcgtcgctgccggcggggcacgccgacgagc 735 Query: 440 cgccgttgctgacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcct 499 ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 734 cgccgctgctgacgcagccgttggaggagtagccgcggtagttgacgacgaacggcgcct 675 Query: 500 gggtccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcg 559 || ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 674 ggctccagtcgatcttgacgtcgccgtgccgggtcgcccagtagctgccgtcccagagcg 615 Query: 560 tggcgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacg 619 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 614 tggcgtgcaccatcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaagg 555 Query: 620 tcctcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgt 679 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 554 tcctcaccggcacgtcgtcgacctggaatatgatgttcttggggttccagacgatcttgt 495 Query: 680 aggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||| Sbjct: 494 aggtgtggaagtcggcggtggggtcga 468
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 270 bits (136), Expect = 6e-69 Identities = 187/204 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 671 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 612 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 611 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 552 Query: 623 tcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtagg 682 |||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||| Sbjct: 551 tcaccggcacgtcgtccacctggaatatgatgttttggggattccagatgatcttgtagg 492 Query: 683 tgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||| Sbjct: 491 tgtggaagtcggcggtggggtcga 468 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 910 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 851 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 850 ggacatgtagttgcgctcggcccacgcgacggtgccgag 812
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 270 bits (136), Expect = 6e-69 Identities = 187/204 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 676 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 617 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 616 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 557 Query: 623 tcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtagg 682 |||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||| Sbjct: 556 tcaccggcacgtcgtccacctggaatatgatgttttggggattccagatgatcttgtagg 497 Query: 683 tgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||| Sbjct: 496 tgtggaagtcggcggtggggtcga 473 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 915 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 856 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 855 ggacatgtagttgcgctcggcccacgcgacggtgccgag 817
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 270 bits (136), Expect = 6e-69 Identities = 187/204 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 667 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 608 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 607 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 548 Query: 623 tcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtagg 682 |||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||| Sbjct: 547 tcaccggcacgtcgtccacctggaatatgatgttttggggattccagatgatcttgtagg 488 Query: 683 tgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||| Sbjct: 487 tgtggaagtcggcggtggggtcga 464 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 906 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 847 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 846 ggacatgtagttgcgctcggcccacgcgacggtgccgag 808
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 270 bits (136), Expect = 6e-69 Identities = 187/204 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 676 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 617 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 616 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 557 Query: 623 tcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtagg 682 |||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||| Sbjct: 556 tcaccggcacgtcgtccacctggaatatgatgttttggggattccagatgatcttgtagg 497 Query: 683 tgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||| Sbjct: 496 tgtggaagtcggcggtggggtcga 473 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 915 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 856 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 855 ggacatgtagttgcgctcggcccacgcgacggtgccgag 817
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 270 bits (136), Expect = 6e-69 Identities = 187/204 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 671 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 612 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 611 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 552 Query: 623 tcaccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtagg 682 |||||||||||||||||||||||||||||||||| | ||| ||||||| ||||||||||| Sbjct: 551 tcaccggcacgtcgtccacctggaatatgatgttttggggattccagatgatcttgtagg 492 Query: 683 tgtggaagtcggcggtggggtcga 706 |||||||||||||||||||||||| Sbjct: 491 tgtggaagtcggcggtggggtcga 468 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 910 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 851 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 850 ggacatgtagttgcgctcggcccacgcgacggtgccgag 812
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 222 bits (112), Expect = 1e-54 Identities = 220/256 (85%) Strand = Plus / Minus Query: 451 acgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtcg 510 ||||||||||||| | |||| |||||||| ||| ||||||||| | || |||||| | Sbjct: 728 acgcagccgttggcgtggtaggcgcggtaggagaccacgaagggctcgtgcctccagtgg 669 Query: 511 atcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcacc 570 |||||||||| |||||| | || |||||||||||||||||||| ||||| ||||||||| Sbjct: 668 atcttgacgttgccgtgctgcgttgcccagtagctgccgtcccacagcgtcgcgtgcacc 609 Query: 571 gtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggc 630 ||||||| ||| ||||| |||||||||| ||||| ||||||||||||||||||| | Sbjct: 608 tccatcggcctgctcgtcgggaacggcaggtcatcgtagttcttgaacgtcctcaccgcc 549 Query: 631 acgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaag 690 |||| |||||||| ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 548 acgttgtccacctcgaatatgatgttcttggggttccaggtgatcttgtaggtgtggaaa 489 Query: 691 tcggcggtggggtcga 706 ||||||| ||| |||| Sbjct: 488 tcggcggagggatcga 473 Score = 79.8 bits (40), Expect = 1e-11 Identities = 112/136 (82%) Strand = Plus / Minus Query: 293 cggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacatgtacttgc 352 ||||||| || |||||||| ||||||||||||| |||||||| |||||||| | | |||| Sbjct: 886 cggggaatcccttggggaaccgccagccgtcggcgcagtagttgtaggacaggcagttgc 827 Query: 353 tctcggcccaggcgacggtgccgagggctttggcgtcgagctccgtgctcatccaggcgt 412 ||| | ||||||||||||| |||| | | | || |||||||| || ||||||||||| Sbjct: 826 gctccgtccaggcgacggtgtcgagctcctcgtcgccgagctccctgtgcatccaggcgt 767 Query: 413 cgctgccggcggggca 428 || |||| ||||||| Sbjct: 766 cggagccgtcggggca 751
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 210 bits (106), Expect = 5e-51 Identities = 222/258 (86%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 450 gacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtc 509 |||||||||||||| | |||||| ||||| |||||||||||| | ||| ||||| Sbjct: 712 gacgcagccgttggcgtggtagccctggtaggggacgacgaaggggtcgtggcgccagtg 653 Query: 510 gatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcac 569 |||||||||| |||||| | || |||||||||||||||||||| ||||| |||||||| Sbjct: 652 gatcttgacggtgccgtgctgcgtcgcccagtagctgccgtcccacagcgtcgcgtgcac 593 Query: 570 cgtcatcggctg-gctgctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccg 628 |||||||||| | || | |||| |||||||| |||||||||||||||| |||||||||| Sbjct: 592 cgtcatcggccgcgccga-cgggaacggcaggccgtcgtacttcttgaaggtcctcaccg 534 Query: 629 gcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtgga 688 ||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 533 gcacgccgtccacctcgaatatgatgttctttgggttccatgtgatcttgtaggtgtgga 474 Query: 689 agtcggcggtggggtcga 706 ||||||||| |||||||| Sbjct: 473 agtcggcggaggggtcga 456 Score = 103 bits (52), Expect = 8e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 285 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 344 ||||||| |||||||||| |||||||||||||| ||||||| |||||||| |||||| | Sbjct: 883 gcactcgccggggaagcccttggggaagcgccatccgtcggcgcagtagttgtaggagag 824 Query: 345 gtacttgctctcggcccaggcgacggtgccgagggctttggcgtcgagctccgtgctcat 404 | | |||| ||||||||| |||||||||| ||| | | |||||||||| | ||| Sbjct: 823 gcagttgcgctcggcccacgcgacggtgctgagctcgccgtcgtcgagctcgcggtgcat 764 Query: 405 ccaggcgtcgctgccggcggggca 428 |||||||||||||||||||||||| Sbjct: 763 ccaggcgtcgctgccggcggggca 740
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 196 bits (99), Expect = 7e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 452 cgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtcga 511 ||||| |||||| ||||||| | |||||| ||||||||||||||| || |||||||| Sbjct: 622 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 563 Query: 512 tcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccg 571 ||||||| ||||| | ||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 562 tcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagcgtggcgtgcaccg 503 Query: 572 tcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggca 631 ||| |||| | | ||||||||||||||| ||||| |||||| | ||||| || Sbjct: 502 ccatgggcttggcgtccgggtacggcaggtcatcgtagcgcttgaagacgcgcaccgtca 443 Query: 632 cgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagt 691 |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 442 cgtcgtccacctggaagatgatgttcttgtcgttccagacgatcttgtatttgtggaagt 383 Query: 692 cggcggtggggtcga 706 |||||| ||||||| Sbjct: 382 cggcggccgggtcga 368
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 196 bits (99), Expect = 7e-47 Identities = 216/255 (84%) Strand = Plus / Minus Query: 452 cgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcctgggtccagtcga 511 ||||| |||||| ||||||| | |||||| ||||||||||||||| || |||||||| Sbjct: 786 cgcaggcgttggcggtgtagtctcggtaggagacgacgaagggcgcgctggaccagtcga 727 Query: 512 tcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtggcgtgcaccg 571 ||||||| ||||| | ||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 726 tcttgacctcgcccttgcgcgtggcccagtagctgccgtcccacagcgtggcgtgcaccg 667 Query: 572 tcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcctcaccggca 631 ||| |||| | | ||||||||||||||| ||||| |||||| | ||||| || Sbjct: 666 ccatgggcttggcgtccgggtacggcaggtcatcgtagcgcttgaagacgcgcaccgtca 607 Query: 632 cgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagt 691 |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||| Sbjct: 606 cgtcgtccacctggaagatgatgttcttgtcgttccagacgatcttgtatttgtggaagt 547 Query: 692 cggcggtggggtcga 706 |||||| ||||||| Sbjct: 546 cggcggccgggtcga 532
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 188 bits (95), Expect = 2e-44 Identities = 176/203 (86%) Strand = Plus / Minus Query: 504 ccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtggc 563 ||||| |||||||||| |||||| | || |||||||||||||||||||| |||||||| Sbjct: 667 ccagtggatcttgacggtgccgtgctgcgtcgcccagtagctgccgtcccacagcgtggc 608 Query: 564 gtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcct 623 |||||||||||| ||| ||||| ||| | |||||| |||||||||||||||| || | Sbjct: 607 gtgcaccgtcatgggccggctggaggggaagggcaggccgtcgtacttcttgaaggtgcg 548 Query: 624 caccggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggt 683 ||| |||||| |||| |||| ||| ||||||||||||||||||||| |||||||||||| Sbjct: 547 cacgggcacgccgtcgacctcgaagatgatgttcttggggttccaggtgatcttgtaggt 488 Query: 684 gtggaagtcggcggtggggtcga 706 |||||||||||||| |||||||| Sbjct: 487 gtggaagtcggcggaggggtcga 465 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 286 cactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacatg 345 |||||| ||||||| || |||||||| | ||||||||||| |||||||| |||||| | | Sbjct: 891 cactcgccggggaatcccttggggaacctccagccgtcggcgcagtagttgtaggagagg 832 Query: 346 tacttgctctcggcccaggcgacggt 371 | |||| |||||||||||||||||| Sbjct: 831 cagttgcgctcggcccaggcgacggt 806 Score = 54.0 bits (27), Expect = 6e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 402 catccaggcgtcgctgccggcggggca 428 ||||||||||||||||||||||||||| Sbjct: 775 catccaggcgtcgctgccggcggggca 749
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 186 bits (94), Expect = 7e-44 Identities = 133/146 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 8322442 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 8322383 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 8322382 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 8322323 Query: 623 tcaccggcacgtcgtccacctggaat 648 |||||||||||||||||||||||||| Sbjct: 8322322 tcaccggcacgtcgtccacctggaat 8322297 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 8322681 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 8322622 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 8322621 ggacatgtagttgcgctcggcccacgcgacggtgccgag 8322583 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 8378828 atgatgtgcttggggttccagacgatggagtaggtgtggaagtcggcggtggggtcga 8378885 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 8322198 atgatgttttggggattccagatgatcttgtaggtgtggaagtcggcggtggggtcga 8322141
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 186 bits (94), Expect = 7e-44 Identities = 133/146 (91%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgccgtggcgggtggcccagtagctgccgtcccagagcgtgg 562 ||||||||||||||||||||||||| | || |||||||||||||||||||| ||||| | Sbjct: 62551 tccagtcgatcttgacgtcgccgtgcctcgtcgcccagtagctgccgtcccacagcgtcg 62492 Query: 563 cgtgcaccgtcatcggctggctgctcgggtacggcaggtcgtcgtacttcttgaacgtcc 622 |||||| | ||||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct: 62491 cgtgcagcctcatcggcttgctctgcgggtacgccaggtcgtcgtacttcttgaacgtcc 62432 Query: 623 tcaccggcacgtcgtccacctggaat 648 |||||||||||||||||||||||||| Sbjct: 62431 tcaccggcacgtcgtccacctggaat 62406 Score = 133 bits (67), Expect = 9e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||| ||||||||||||||||||| | |||||||||||||||||||| |||||||| ||| Sbjct: 62790 gcggtagcactcggcggggaagccctgggggaagcgccagccgtcggcgcagtagttgta 62731 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgccgag 377 ||||||||| |||| ||||||||| |||||||||||||| Sbjct: 62730 ggacatgtagttgcgctcggcccacgcgacggtgccgag 62692 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118937 atgatgtgcttggggttccagacgatggagtaggtgtggaagtcggcggtggggtcga 118994 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||| | ||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 62307 atgatgttttggggattccagatgatcttgtaggtgtggaagtcggcggtggggtcga 62250
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 627 cggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtg 686 ||||||| |||||||| | | |||||||| |||||||||||||||||| ||||||||| Sbjct: 540 cggcacgccgtccaccagaattatgatgtgcttggggttccagacgatggagtaggtgtg 481 Query: 687 gaagtcggcggtggggtcga 706 |||||||||||||||||||| Sbjct: 480 gaagtcggcggtggggtcga 461
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 91.7 bits (46), Expect = 3e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 531 ggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggctgctcgg 590 |||||||||||||||||||||||| ||||||||||||| |||||| ||| | |||||| Sbjct: 683 ggtggcccagtagctgccgtcccacagcgtggcgtgcagcgtcatgggcctggagctcgg 624 Query: 591 gtacggcaggtcgtcgta 608 ||||||||||||| |||| Sbjct: 623 gtacggcaggtcggcgta 606 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 661 gggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||| ||||||||||| ||||||||| |||||||| Sbjct: 553 gggttccagatgatggtgtaggtgtggtagtcggcggaggggtcga 508 Score = 44.1 bits (22), Expect = 0.62 Identities = 55/66 (83%) Strand = Plus / Minus Query: 447 gctgacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgcctgggtcca 506 |||||||||| || ||| | ||||| ||||||| ||||||||||||||| | || ||| Sbjct: 767 gctgacgcaggcgctggcgtagtagctgcggtaggagacgacgaagggcgcgtcggacca 708 Query: 507 gtcgat 512 |||||| Sbjct: 707 gtcgat 702
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||| Sbjct: 984 gcgggagcactcggcggggaagccctgcgggaagcgccagccgtcgtcgcagtagttgta 925 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgcc 374 | |||||| || | |||||||||||||||||| Sbjct: 924 gtgcatgtagttctgcctggcccaggcgacggtgcc 889 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 532 gtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggctgctcggg 591 ||||||||||||||||||||||| |||||||||||||||| ||| |||| | || |||| Sbjct: 725 gtggcccagtagctgccgtcccacagcgtggcgtgcaccgacatgggcttcccgcccggg 666 Query: 592 tacggcaggtc 602 |||| |||||| Sbjct: 665 tacgccaggtc 655 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 633 gtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtc 692 ||||||||||| ||| |||| ||||||| |||||||| ||| |||||||||||||||| Sbjct: 624 gtcgtccaccttgaagatgacgttcttgtcgttccagatgatggtgtaggtgtggaagtc 565 Query: 693 ggcggtggggtcga 706 ||||| ||||||| Sbjct: 564 ggcggccgggtcga 551
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 532 gtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcggctggctgctcggg 591 ||||||||||||||||||||||| |||||||||||||||| ||| |||| | || |||| Sbjct: 247 gtggcccagtagctgccgtcccacagcgtggcgtgcaccgacatgggcttcccgcccggg 188 Query: 592 tacggcaggtc 602 |||| |||||| Sbjct: 187 tacgccaggtc 177 Score = 71.9 bits (36), Expect = 3e-09 Identities = 81/96 (84%) Strand = Plus / Minus Query: 279 gcgggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgta 338 |||||||||||||||||||||||| | ||||| |||||||||||| |||||||| ||| Sbjct: 506 gcgggagcactcggcggggaagccctgcgggaatcgccagccgtcgtcgcagtagttgta 447 Query: 339 ggacatgtacttgctctcggcccaggcgacggtgcc 374 | |||||| || | |||||||||||||||||| Sbjct: 446 gtgcatgtagttctgcctggcccaggcgacggtgcc 411 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 633 gtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtc 692 ||||||||||| ||| |||| ||||||| |||||||| ||| |||||||||||||||| Sbjct: 146 gtcgtccaccttgaagatgacgttcttgtcgttccagatgatggtgtaggtgtggaagtc 87 Query: 693 ggcggtggggtcga 706 ||||| ||||||| Sbjct: 86 ggcggccgggtcga 73
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 77.8 bits (39), Expect = 4e-11 Identities = 71/79 (89%), Gaps = 2/79 (2%) Strand = Plus / Minus Query: 531 ggtggcccagtagctgccgtcccagagcgtggcgtgcaccgtcatcgg-ctggctgctcg 589 |||||||||||||||||||||||| ||||||||||||| || ||| || || || ||||| Sbjct: 687 ggtggcccagtagctgccgtcccacagcgtggcgtgcagcgccatgggcctcgc-gctcg 629 Query: 590 ggtacggcaggtcgtcgta 608 |||||||||||||| |||| Sbjct: 628 ggtacggcaggtcggcgta 610 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 285 gcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtaggacat 344 |||||||| |||| ||| | |||||| |||||||||||| |||||||| |||| ||| Sbjct: 927 gcactcgggcgggaggccctgggggaaccgccagccgtcgtcgcagtagttgtagcgcat 868 Query: 345 gtacttgctctcggccca 362 ||| |||||||||||||| Sbjct: 867 gtagttgctctcggccca 850 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 635 cgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcgg 694 ||||||||| ||| | |||||| | |||||||||| ||| ||||||||||| |||||| Sbjct: 583 cgtccaccttgaacaggatgttggtcgggttccagatgatggtgtaggtgtggtagtcgg 524 Query: 695 cggtggggtcga 706 ||| |||||||| Sbjct: 523 cggaggggtcga 512 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 447 gctgacgcagccgttggaggtgtagccgcggtagttgacgacgaagggcgc 497 |||||||||| |||||| || |||||| |||||| ||||||||||||||| Sbjct: 771 gctgacgcaggcgttggcggagtagccccggtaggagacgacgaagggcgc 721
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 628 ggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtgg 687 |||| |||||||||| ||| |||| || |||||||||||||| ||| |||||||||| Sbjct: 628 ggcatgtcgtccaccatgaagatgacgtgcttggggttccagaggatggagtaggtgtgg 569 Query: 688 aagtcggcggtggggtcga 706 ||||||||||||||||||| Sbjct: 568 aagtcggcggtggggtcga 550 Score = 40.1 bits (20), Expect = 9.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 321 gtcggtgcagtagtcgtaggacatgtacttgc 352 |||||||||||||| |||| ||||||||||| Sbjct: 986 gtcggtgcagtagttgtagatcatgtacttgc 955
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Minus Query: 627 cggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtg 686 ||||| |||||||||| ||||||||||| |||||||||||||| ||| ||||||||| Sbjct: 589 cggcatgtcgtccaccatgaatatgatgtgcttggggttccagaggatggagtaggtgtg 530 Query: 687 gaagtcggcggtggggtcg 705 |||||| |||||||||| Sbjct: 529 gaagtccttggtggggtcg 511 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 282 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 341 ||||||||||||||||| ||| | |||||||||| | ||||||||||||| |||| Sbjct: 985 ggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgtagat 926 Query: 342 catgtacttgctct 355 |||||||||||||| Sbjct: 925 catgtacttgctct 912
>ref|XM_473792.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 489 cttggggttccagacgatggagtaggtgtggtagtcggcggtggggtcga 440
>gb|BT017470.1| Zea mays clone EL01N0408C10.c mRNA sequence Length = 878 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 318 cttggggttccagaggatggcgtaggtgtggaagtcggcggtggggtcga 269
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 29323 cttggggttccagacgatggagtaggtgtggtagtcggcggtggggtcga 29274 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 32552 ggggttccagaggatggtgtagttgtggaagtcggcggtggggtcga 32598
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 30553615 cttggggttccagacgatggagtaggtgtggtagtcggcggtggggtcga 30553566 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 30556844 ggggttccagaggatggtgtagttgtggaagtcggcggtggggtcga 30556890 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 32180564 gtaggtgtggaagtcggcggtggggtcga 32180536 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 327 gcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgag 377 |||||||| |||||||||||| |||| ||||| | ||||||| |||||||| Sbjct: 33677805 gcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgag 33677755 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 665 tccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 30516868 tccagacgatggagtaggtgtggaagtcggtggtggggtcga 30516909
>emb|AJ295945.1|FPR295945 Festuca pratensis mRNA for Xet3 protein Length = 1205 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 471 gccgcggtagttgacgacgaagggcgcctgggtccagtcgatcttgacg 519 |||| |||||||| ||||||||||||| |||||||||||| |||||||| Sbjct: 780 gccgtggtagttggcgacgaagggcgcgtgggtccagtcggtcttgacg 732
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 635 cgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcgg 694 |||||||| ||| |||||||| ||||||||||| ||| ||||| |||||||||||| Sbjct: 523 cgtccaccgagaagatgatgttgagggggttccagaggatggtgtagttgtggaagtcgg 464 Query: 695 cggtggggtcga 706 |||||||||||| Sbjct: 463 cggtggggtcga 452
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 635 cgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtggaagtcgg 694 |||||||| ||| |||||||| ||||||||||| ||| ||||| |||||||||||| Sbjct: 591 cgtccaccgagaagatgatgttgagggggttccagaggatggtgtagttgtggaagtcgg 532 Query: 695 cggtggggtcga 706 |||||||||||| Sbjct: 531 cggtggggtcga 520
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 507 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 458
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 599 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 550
>gb|AY023463.1| Oryza sativa microsatellite MRG5788 containing (TCG)X8, closest to marker R11, genomic sequence Length = 224 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 282 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 341 ||||||||||||||||| ||| | |||||||||| | ||||||||||||| |||| Sbjct: 78 ggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgtagat 19 Query: 342 catgtacttgctct 355 |||||||||||||| Sbjct: 18 catgtacttgctct 5
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 20676622 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 20676573 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 17438452 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 17438406
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 282 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 341 ||||||||||||||||| ||| | |||||||||| | ||||||||||||| |||| Sbjct: 28773072 ggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgtagat 28773131 Query: 342 catgtacttgctct 355 |||||||||||||| Sbjct: 28773132 catgtacttgctct 28773145 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 661 gggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 28754874 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 28754829 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcg 705 ||||||| |||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 28773580 atgatgtgcttggggttccagaggatggagtaggtgtggaagtccttggtggggtcg 28773636
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Plus Query: 282 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 341 ||||||||||||||||| ||| | |||||||||| | ||||||||||||| |||| Sbjct: 80847 ggagcactcggcggggacgccctgggggaagcgcttgggatcggtgcagtagttgtagat 80906 Query: 342 catgtacttgctct 355 |||||||||||||| Sbjct: 80907 catgtacttgctct 80920 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 661 gggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 62649 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 62604 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Plus Query: 649 atgatgttcttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcg 705 ||||||| |||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 81355 atgatgtgcttggggttccagaggatggagtaggtgtggaagtccttggtggggtcg 81411
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 661 gggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 155440 gggttccagaggatggagtaggtgtggaagtcggcggtggggtcga 155395
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 29372 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 29323
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 599 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 550
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 657 cttggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||||||| ||| ||||| ||||||||||||||||||||||| Sbjct: 693 cttggggttccagaggatggagtaggagtggaagtcggcggtggggtcga 644
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 655 gtaggtgtggaagtcggcggtggggtcga 683
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13, complete sequence Length = 127135 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 76253 gtaggtgtggaagtcggcggtggggtcga 76225
>dbj|AK099331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024P08, full insert sequence Length = 1199 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 475 gtaggtgtggaagtcggcggtggggtcga 447
>dbj|AK059277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C07, full insert sequence Length = 1279 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 479 gtaggtgtggaagtcggcggtggggtcga 451
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 549 gtaggtgtggaagtcggcggtggggtcga 521
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete sequence Length = 62215 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 678 gtaggtgtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||||||||| Sbjct: 31740 gtaggtgtggaagtcggcggtggggtcga 31712
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 56.0 bits (28), Expect = 2e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 627 cggcacgtcgtccacctggaatatgatgttcttggggttccagacgatcttgtaggtgtg 686 ||||| |||||||||| ||| ||||||| ||| |||||||||| ||| ||||||||| Sbjct: 525 cggcatgtcgtccaccatgaagatgatgtgctttgggttccagaggatggagtaggtgtg 466 Query: 687 gaagtcggcggtggggtcga 706 ||||||| |||||| |||| Sbjct: 465 gaagtcgttggtgggatcga 446 Score = 44.1 bits (22), Expect = 0.62 Identities = 61/74 (82%) Strand = Plus / Minus Query: 282 ggagcactcggcggggaagccgttggggaagcgccagccgtcggtgcagtagtcgtagga 341 ||||||||||||||||| ||| |||| || |||| | ||| |||||||||| |||| Sbjct: 921 ggagcactcggcggggacgcccttggcgacgcgcttggggtcagtgcagtagttgtagat 862 Query: 342 catgtacttgctct 355 |||||| ||||||| Sbjct: 861 catgtaattgctct 848
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 327 gcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgag 377 |||||||| |||||||||||| |||| ||||| | ||||||| |||||||| Sbjct: 108865 gcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgag 108815
>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02, complete sequence Length = 153623 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 327 gcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgag 377 |||||||| |||||||||||| |||| ||||| | ||||||| |||||||| Sbjct: 28248 gcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgag 28198
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 327 gcagtagtcgtaggacatgtacttgctctcggcccaggcgacggtgccgag 377 |||||||| |||||||||||| |||| ||||| | ||||||| |||||||| Sbjct: 108983 gcagtagttgtaggacatgtagttgcgctcgggctaggcgacagtgccgag 108933
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/75 (88%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 536 cccagtagctgccgtccc-agagcgtggcgtgcaccgtcatcggc-tggctgctcgggta 593 |||||||||||||||||| | ||||||||||||| || ||| ||| | || ||||||||| Sbjct: 708 cccagtagctgccgtccccacagcgtggcgtgcagcgccatgggcctcgc-gctcgggta 650 Query: 594 cggcaggtcgtcgta 608 |||||||||| |||| Sbjct: 649 cggcaggtcggcgta 635 Score = 52.0 bits (26), Expect = 0.003 Identities = 41/46 (89%) Strand = Plus / Minus Query: 661 gggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||| ||||||||||| ||||||||| |||||||| Sbjct: 582 gggttccagatgatggtgtaggtgtggtagtcggcggaggggtcga 537
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 665 tccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 448 tccagacgatggagtaggtgtggaagtcggtggtggggtcga 407
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 665 tccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 150245 tccagacgatggagtaggtgtggaagtcggtggtggggtcga 150286
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 665 tccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 520 tccagacgatggagtaggtgtggaagtcggtggtggggtcga 479
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Minus Query: 665 tccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 |||||||||| ||||||||||||||||| ||||||||||| Sbjct: 538 tccagacgatggagtaggtgtggaagtcggtggtggggtcga 497
>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence Length = 250215 Score = 50.1 bits (25), Expect = 0.010 Identities = 31/33 (93%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaagtgatgatg 267 |||| |||||||||||||||||||| ||||||| Sbjct: 127084 aggaaggaaggaaggaagaagaaagagatgatg 127116 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaa 254 |||||||||||||||||||| Sbjct: 57080 aggagggaaggaaggaagaa 57061
>emb|AL671917.8| Mouse DNA sequence from clone RP23-217I18 on chromosome 3, complete sequence Length = 172826 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaagt 260 ||||||||||||||||||||||||| Sbjct: 62338 ggagggaaggaaggaagaagaaagt 62362
>emb|AL049767.12|HSJ172H20 Human DNA sequence from clone RP1-172H20 on chromosome 20q12-13.12 Contains the PI3 gene for skin-derived protease inhibitor 3 (SKALP)the SEMG1 gene for semenogelin I, the SEMG2 gene for semenogelin II, complete sequence Length = 99747 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 86628 ggagggaaggaaggaagaagaaag 86651
>emb|X96421.1|HSCAMF3X1 H.sapiens Y chromosome cosmid cAMF3.1 containing Yp pseudoautosomal boundary, PAB1 Length = 41154 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 26768 ggagggaaggaaggaagaagaaag 26745
>emb|Z47556.1|HSSG1SG2 H.sapiens genes for semenogelin I and semenogelin II Length = 28069 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 12051 ggagggaaggaaggaagaagaaag 12074
>gb|DP000037.1| Pan troglodytes target 106 genomic scaffold Length = 302717 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 247289 ggagggaaggaaggaagaagaaag 247312
>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete sequence Length = 141759 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 31579 ggagggaaggaaggaagaagaaag 31556
>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence Length = 186504 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaag 259 |||||||||||||||||||||||| Sbjct: 49149 ggagggaaggaaggaagaagaaag 49172
>gb|AC012447.8| Homo sapiens BAC clone RP11-204L24 from 2, complete sequence Length = 166305 Score = 48.1 bits (24), Expect = 0.040 Identities = 24/24 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaa 258 |||||||||||||||||||||||| Sbjct: 100574 aggagggaaggaaggaagaagaaa 100597
>gb|AC144767.4| Mus musculus BAC clone RP23-82F8 from chromosome 6, complete sequence Length = 229027 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaa 257 ||||||||||||||||||||||| Sbjct: 43484 aggagggaaggaaggaagaagaa 43506 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 43710 ggaaggaaggaagaagaaag 43729
>ref|NM_187656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 408 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 362
>ref|XM_468468.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 534 gtggaagtcggcggtggggtcga 512
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 513 gtggaagtcggcggtggggtcga 491
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 471715 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 471761
>gb|AY498860.1| Homo sapiens tumor necrosis factor receptor superfamily, member 8 (TNFRSF8) gene, complete cds Length = 84102 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaagaaa 258 ||||||||||||||||||||||| Sbjct: 11364 ggagggaaggaaggaagaagaaa 11342
>gb|AC117662.13| Mus musculus chromosome 16, clone RP23-351D19, complete sequence Length = 293822 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaa 257 ||||||||||||||||||||||| Sbjct: 95338 aggagggaaggaaggaagaagaa 95316
>gb|AC161761.3| Mus musculus BAC clone RP23-379E17 from chromosome 3, complete sequence Length = 205852 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 222 aacaccaacgacgaggagggaaggaaggaag 252 |||| |||| ||||||||||||||||||||| Sbjct: 133876 aacaacaacaacgaggagggaaggaaggaag 133846
>gb|AC119163.23| Mus musculus chromosome 3, clone RP24-527P22, complete sequence Length = 202675 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 222 aacaccaacgacgaggagggaaggaaggaag 252 |||| |||| ||||||||||||||||||||| Sbjct: 15343 aacaacaacaacgaggagggaaggaaggaag 15313
>emb|AL357835.11| Human DNA sequence from clone RP11-426M1 on chromosome 1 Contains the TNFRSF8 gene for tumor necrosis factor receptor superfamily member 8, a ribosomal protein L23a (RPL23A) pseudogene, the 5' end of the TNFRSF1B gene for tumor necrosis factor receptor superfamily member 1B and three CpG islands, complete sequence Length = 151498 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaagaaa 258 ||||||||||||||||||||||| Sbjct: 26986 ggagggaaggaaggaagaagaaa 26964
>gb|AC093176.6| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109H11, Complete Sequence, complete sequence Length = 192227 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaa 257 ||||||||||||||||||||||| Sbjct: 102543 aggagggaaggaaggaagaagaa 102521 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 102317 ggaaggaaggaagaagaaag 102298
>gb|AC163627.4| Mus musculus BAC clone RP23-341E13 from chromosome 6, complete sequence Length = 191467 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaa 257 ||||||||||||||||||||||| Sbjct: 20521 aggagggaaggaaggaagaagaa 20499 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 20295 ggaaggaaggaagaagaaag 20276
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 471713 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 471759
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 35396717 gtggaagtcggcggtggggtcga 35396739 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgcc 524 |||||||||||||||||||||| Sbjct: 30350821 tccagtcgatcttgacgtcgcc 30350800
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 106676 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 106630
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1063_D06 Length = 102439 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 8238 gtggaagtcggcggtggggtcga 8260
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 57265 gtggaagtcggcggtggggtcga 57287
>dbj|AK119538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-C03, full insert sequence Length = 1281 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 728 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 682
>dbj|AK104060.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G01, full insert sequence Length = 1186 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 684 gtggaagtcggcggtggggtcga 706 ||||||||||||||||||||||| Sbjct: 609 gtggaagtcggcggtggggtcga 587
>dbj|AK061126.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-G12, full insert sequence Length = 1193 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 640 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 594
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Plus Query: 660 ggggttccagacgatcttgtaggtgtggaagtcggcggtggggtcga 706 ||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 70175 ggggttccagaggatggcgtagtggtggaagtcggcggtggggtcga 70221
>gb|AC146127.4| Pan troglodytes BAC clone RP43-23F10 from 7, complete sequence Length = 190149 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||| |||||||||||||||||||| Sbjct: 29559 gaggaaggaaggaaggaagaagaaag 29584
>gb|AC134530.3| Mus musculus BAC clone RP24-507K16 from chromosome 5, complete sequence Length = 215112 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 240 ggaaggaaggaagaagaaagtg 261 |||||||||||||||||||||| Sbjct: 182243 ggaaggaaggaagaagaaagtg 182264
>gb|AC112942.11| Mus musculus chromosome 7, clone RP23-449N21, complete sequence Length = 162570 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaagt 260 |||| ||||||||||||||||||||| Sbjct: 78837 aggaaggaaggaaggaagaagaaagt 78862
>gb|AF246928.2| Homo sapiens chromosome 21 clone SCb-318B17 map p11-q21.1, complete sequence Length = 171914 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 aaaatgtacttacatgggaaat 176 |||||||||||||||||||||| Sbjct: 29073 aaaatgtacttacatgggaaat 29052
>gb|AC146006.2| Pan troglodytes BAC clone RP43-165A19 from 7, complete sequence Length = 211780 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||| |||||||||||||||||||| Sbjct: 210507 gaggaaggaaggaaggaagaagaaag 210482
>gb|AC125466.4| Mus musculus BAC clone RP23-477O24 from chromosome 9, complete sequence Length = 150128 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 agggaaggaaggaagaagaaag 259 |||||||||||||||||||||| Sbjct: 139104 agggaaggaaggaagaagaaag 139083 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 146799 aggaaggaaggaaggaagaagaaag 146823 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 146736 aggaaggaaggaaggaagaagaaag 146760
>gb|AC146483.2| Pan troglodytes BAC clone RP43-30K12 from 7, complete sequence Length = 208066 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||| |||||||||||||||||||| Sbjct: 93900 gaggaaggaaggaaggaagaagaaag 93925
>emb|AL451103.7| Human DNA sequence from clone RP11-172M3 on chromosome Xp21.1-21.2 Contains a CpG island, complete sequence Length = 175384 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||||||||||||||||| |||||| Sbjct: 148394 gaggagggaaggaaggaaggagaaag 148369
>emb|X79465.1|CMVDNA Cauliflower Mosaic Virus strain B29 complete DNA sequence Length = 8031 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 agaagaaagtgatgatggatca 272 |||||||||||||||||||||| Sbjct: 3619 agaagaaagtgatgatggatca 3640
>gb|AC087455.7| Homo sapiens, clone RP11-143J24, complete sequence Length = 185644 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||||||||||||||||| |||||| Sbjct: 50935 gaggagggaaggaaggaaggagaaag 50910 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 173774 gaggagggaaggaaggaagaa 173794
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaaga 256 |||||||||||||||||||||| Sbjct: 40531 aggagggaaggaaggaagaaga 40510
>gb|AC079127.28| Homo sapiens 12 BAC RP11-143P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138000 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 agggaaggaaggaagaagaaag 259 |||||||||||||||||||||| Sbjct: 49009 agggaaggaaggaagaagaaag 49030
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaagt 260 |||| ||||||||||||||||||||| Sbjct: 69212 aggaaggaaggaaggaagaagaaagt 69187
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence Length = 193681 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||||||||||||||||| |||||| Sbjct: 126447 gaggagggaaggaaggaaggagaaag 126422
>gb|AC012504.7| Homo sapiens BAC clone RP11-469O11 from 4, complete sequence Length = 205886 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 237 gagggaaggaaggaagaagaaagtga 262 ||||||||||||||||| |||||||| Sbjct: 190225 gagggaaggaaggaagacgaaagtga 190200
>gb|AC025471.6| Homo sapiens chromosome 5 clone RP11-138C1, complete sequence Length = 148607 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||| |||||||||||||||||||| Sbjct: 56696 gaggaaggaaggaaggaagaagaaag 56721
>gb|AC008968.6| Homo sapiens chromosome 5 clone CTD-2367F19, complete sequence Length = 92998 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||| |||||||||||||||||||| Sbjct: 46134 gaggaaggaaggaaggaagaagaaag 46159
>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8, complete sequence Length = 234864 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 241 gaaggaaggaagaagaaagtga 262 |||||||||||||||||||||| Sbjct: 67967 gaaggaaggaagaagaaagtga 67988
>dbj|BS000016.1| Pan troglodytes chromosome 22 clone:PTB-066F21, map 22, complete sequences Length = 148564 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 aaaatgtacttacatgggaaat 176 |||||||||||||||||||||| Sbjct: 114675 aaaatgtacttacatgggaaat 114654
>dbj|AP005751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0072H09 Length = 160541 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 tccagtcgatcttgacgtcgcc 524 |||||||||||||||||||||| Sbjct: 31681 tccagtcgatcttgacgtcgcc 31660
>gb|AC018632.1|AC018632 Genomic Sequence For Arabidopsis thaliana Clone F3F24, Chromosome V, complete sequence Length = 151828 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 aaggaagaagaaagtgatgatg 267 |||||||||||||||||||||| Sbjct: 52815 aaggaagaagaaagtgatgatg 52794
>emb|AL163208.2|HS21C008 Homo sapiens chromosome 21 segment HS21C008 Length = 340000 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 aaaatgtacttacatgggaaat 176 |||||||||||||||||||||| Sbjct: 322371 aaaatgtacttacatgggaaat 322350
>gb|AF130248.1|AF130248 Homo sapiens clone 10J13 chromosome 21 map 21q11.2, complete sequence Length = 137074 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 155 aaaatgtacttacatgggaaat 176 |||||||||||||||||||||| Sbjct: 108552 aaaatgtacttacatgggaaat 108531
>dbj|AP003721.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-881M11, complete sequence Length = 201460 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||||||||||||||||| |||||| Sbjct: 134619 gaggagggaaggaaggaaggagaaag 134594
>gb|AC003689.1|AC003689 Homo sapiens Chromosome 11q12.2 PAC clone pDJ1081b4 containing human mRNA for T-cell glycoprotein CD6, complete sequence Length = 137693 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaagaaag 259 ||||||||||||||||||| |||||| Sbjct: 66738 gaggagggaaggaaggaaggagaaag 66713
>gb|AC132131.4| Mus musculus BAC clone RP23-356D16 from 10, complete sequence Length = 170192 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 agggaaggaaggaagaagaaag 259 |||||||||||||||||||||| Sbjct: 133347 agggaaggaaggaagaagaaag 133368 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 ggagggaaggaaggaagaagaaag 259 ||||||||||||||| |||||||| Sbjct: 133187 ggagggaaggaaggaggaagaaag 133210
>gb|M19741.1|MCACPPG1 Cauliflower mosaic virus viable recombinant ORF VIII mRNA, 3' end; ORF V mRNA, complete cds; ORF IV polymerase mRNA, 3' end; and ORF V mRNA, complete cds; ORF IV polymerase mRNA, 3' end; and ORF V capsid protein mRNA, 5' end Length = 420 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 agaagaaagtgatgatggatca 272 |||||||||||||||||||||| Sbjct: 76 agaagaaagtgatgatggatca 97
>dbj|AB013078.1| Alcaligenes xylosoxidans nir gene for Nitrite Reductase (NiR), complete cds Length = 2375 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 227 caacgacgaggagggaaggaaggaag 252 ||||| |||||||||||||||||||| Sbjct: 2349 caacggcgaggagggaaggaaggaag 2324
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 101490 aggaaggaaggaaggaagaagaaag 101466
>gb|AC122789.8| Mus musculus chromosome 5, clone RP24-258A20, complete sequence Length = 182866 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 50678 aggaaggaaggaaggaagaagaaag 50702
>gb|AC152953.1| Mus musculus 10 BAC RP23-403E19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211343 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 74180 aggaaggaaggaaggaagaagaaag 74156
>gb|AC161519.11| Mus musculus chromosome 18, clone RP24-83L9, complete sequence Length = 233631 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 111614 gaggagggaaggaaggaagaa 111634
>gb|AC116792.17| Mus musculus chromosome 6, clone RP24-304O23, complete sequence Length = 155145 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaagtgatgatg 267 |||| ||||||||||||| |||||| ||||||| Sbjct: 42075 aggaaggaaggaaggaaggagaaagggatgatg 42043
>gb|AC153622.11| Mus musculus 6 BAC RP23-301N17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195335 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 20465 aggagggaaggaaggaagaag 20485
>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence Length = 191726 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 114855 aggaaggaaggaaggaagaagaaag 114831
>gb|AY640046.1| Ixodes scapularis TROSPA gene, complete cds Length = 11320 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 cgacgaggagggaaggaagga 250 ||||||||||||||||||||| Sbjct: 7094 cgacgaggagggaaggaagga 7074
>gb|AC132281.4| Mus musculus BAC clone RP24-348L6 from chromosome 7, complete sequence Length = 181949 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 23404 aggaaggaaggaaggaagaagaaag 23428
>gb|AC131337.16| Mus musculus chromosome 15, clone RP23-480E1, complete sequence Length = 190303 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 160433 aggaaggaaggaaggaagaagaaag 160409
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 11194 aggaaggaaggaaggaagaagaaag 11170 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 11353 ggaaggaaggaagaagaaag 11334
>gb|AC164410.5| Mus musculus chromosome 5, clone RP23-6J21, complete sequence Length = 245837 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 27496 aggaaggaaggaaggaagaagaaag 27520
>gb|AC120144.11| Mus musculus chromosome 8, clone RP24-427K8, complete sequence Length = 210003 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 70010 aggagggaaggaaggaagaag 70030 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaa 254 |||||||||||||||||||| Sbjct: 70083 aggagggaaggaaggaagaa 70102
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 193352 aggaaggaaggaaggaagaagaaag 193328
>gb|AF064859.1| Homo sapiens chromosome 21q22.3 PAC 141B3, complete sequence, containing ribosomal protein homologue pseudogene L23a Length = 122571 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||| |||||| Sbjct: 47133 aggagggaaggaaggaaggagaaag 47157
>gb|AF516878.1| Mus musculus ribosomal RNA intergenic spacer, partial sequence Length = 6543 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 3515 aggaaggaaggaaggaagaagaaag 3491
>gb|AC139231.11| Mus musculus chromosome 1, clone RP24-87I22, complete sequence Length = 191438 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 78806 aggaaggaaggaaggaagaagaaag 78782
>gb|AC101728.10| Mus musculus chromosome 19, clone RP23-328I5, complete sequence Length = 184577 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 146227 aggaaggaaggaaggaagaagaaag 146251
>gb|AC149084.5| Mus musculus BAC clone RP23-173A12 from chromosome 19, complete sequence Length = 188848 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 32569 aggaaggaaggaaggaagaagaaag 32593
>gb|AC134415.8| Mus musculus chromosome 3, clone RP24-224P21, complete sequence Length = 167586 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 151715 aggaaggaaggaaggaagaagaaag 151691
>gb|AC163297.4| Mus musculus BAC clone RP23-106G24 from chromosome 3, complete sequence Length = 194271 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 129669 aggaaggaaggaaggaagaagaaag 129693
>gb|AC163622.4| Mus musculus BAC clone RP24-566G6 from chromosome y, complete sequence Length = 166756 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 97618 aggaaggaaggaaggaagaagaaag 97594
>gb|AC166816.2| Mus musculus chromosome 5, clone RP24-321O22, complete sequence Length = 156357 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 98449 aggaaggaaggaaggaagaagaaag 98473
>gb|AC109239.8| Mus musculus chromosome 3, clone RP23-191N23, complete sequence Length = 187162 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 15124 aggaaggaaggaaggaagaagaaag 15100
>gb|AC133896.7| Mus musculus chromosome 5, clone RP24-529E15, complete sequence Length = 187415 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 131381 aggaaggaaggaaggaagaagaaag 131357
>gb|AC132948.3| Mus musculus BAC clone RP24-467P6 from chromosome 8, complete sequence Length = 166801 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 144370 aggaaggaaggaaggaagaagaaag 144394
>gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome 17, complete sequence Length = 229599 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 103166 aggaaggaaggaaggaagaagaaag 103190
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 159164 aggaaggaaggaaggaagaagaaag 159140
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete sequence Length = 180482 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||| |||||| Sbjct: 147532 aggagggaaggaaggaaggagaaag 147556
>gb|AC144945.4| Mus musculus BAC clone RP23-334D20 from chromosome 19, complete sequence Length = 233962 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 147545 aggaaggaaggaaggaagaagaaag 147569
>gb|AC133954.3| Mus musculus BAC clone RP23-154C17 from chromosome 5, complete sequence Length = 199991 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 20515 aggagggaaggaaggaagaag 20535
>gb|AC122458.3| Mus musculus BAC clone RP24-270D10 from chromosome 8, complete sequence Length = 185268 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 27379 aggaaggaaggaaggaagaagaaag 27403
>gb|AC162613.2| Mus musculus chromosome 19, clone RP24-270E10, complete sequence Length = 147306 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 54533 aggaaggaaggaaggaagaagaaag 54509
>gb|AC157597.4| Mus musculus BAC clone RP23-231O9 from chromosome 16, complete sequence Length = 171299 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 140438 aggaaggaaggaaggaagaagaaag 140462
>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete sequence Length = 199601 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 137952 aggagggaaggaaggaagaag 137972
>gb|AC164603.4| Mus musculus chromosome 8, clone RP24-114E3, complete sequence Length = 164927 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 74652 aggaaggaaggaaggaagaagaaag 74628
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 124137 aggaaggaaggaaggaagaagaaag 124113 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 124296 ggaaggaaggaagaagaaag 124277
>gb|AC166990.3| Mus musculus BAC clone RP24-173K24 from chromosome 12, complete sequence Length = 144985 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 10748 aggaaggaaggaaggaagaagaaag 10724
>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete sequence Length = 212090 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 49905 aggaaggaaggaaggaagaagaaag 49929
>gb|AC164086.3| Mus musculus BAC clone RP23-25E6 from chromosome 13, complete sequence Length = 214085 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 127455 aggaaggaaggaaggaagaagaaag 127479
>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence Length = 192433 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 21644 aggaaggaaggaaggaagaagaaag 21620
>gb|AC163484.4| Mus musculus chromosome 1, clone RP23-432C4, complete sequence Length = 193216 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 128628 aggaaggaaggaaggaagaagaaag 128652
>gb|AC146602.3| Mus musculus BAC clone RP23-309L12 from chromosome 14, complete sequence Length = 198097 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 35976 aggaaggaaggaaggaagaagaaag 36000
>gb|AC132910.8| Mus musculus chromosome 17, clone RP24-301I14, complete sequence Length = 209975 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 195615 aggaaggaaggaaggaagaagaaag 195639
>gb|AC124721.4| Mus musculus chromosome 10 clone RP23-387G19, complete sequence Length = 216612 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 153927 gaggagggaaggaaggaagaa 153947
>gb|AC073221.9| Homo sapiens BAC clone RP11-543D8 from 7, complete sequence Length = 94027 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 1780 gaggagggaaggaaggaagaa 1760
>gb|AC004848.1| Homo sapiens PAC clone RP4-649P17 from 7, complete sequence Length = 135214 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 34989 gaggagggaaggaaggaagaa 35009
>gb|AC147339.2| Pan troglodytes BAC clone CH251-65E18 from Y, complete sequence Length = 178935 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 22495 gaggagggaaggaaggaagaa 22515
>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence Length = 171127 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 32063 aggagggaaggaaggaagaag 32043
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 91352 aggaaggaaggaaggaagaagaaag 91376
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 151559 aggaaggaaggaaggaagaagaaag 151583
>gb|AC132358.3| Mus musculus BAC clone RP24-133O24 from chromosome 18, complete sequence Length = 182085 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 90236 aggaaggaaggaaggaagaagaaag 90260
>emb|AJ512860.1|CCR512860 Crocuta crocuta microsatellite DNA, clone T01C09 Length = 333 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 122 aggaaggaaggaaggaagaagaaag 146
>emb|CT010443.3| M.truncatula DNA sequence from clone MTH2-76G21 on chromosome 3, complete sequence Length = 111543 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 ggaaggaaggaagaagaaagt 260 ||||||||||||||||||||| Sbjct: 58828 ggaaggaaggaagaagaaagt 58848
>emb|CR381597.7| Zebrafish DNA sequence from clone CH211-182L5 in linkage group 23, complete sequence Length = 41390 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gaaggaaggaagaagaaagtg 261 ||||||||||||||||||||| Sbjct: 28138 gaaggaaggaagaagaaagtg 28118
>gb|AC132320.4| Mus musculus BAC clone RP24-259L9 from chromosome 18, complete sequence Length = 156239 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 61210 aggaaggaaggaaggaagaagaaag 61186
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 57024 aggaaggaaggaaggaagaagaaag 57000
>gb|AC122185.4| Mus musculus BAC clone RP23-18J13 from chromosome 15, complete sequence Length = 202485 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 132781 aggaaggaaggaaggaagaagaaag 132757
>gb|AC125484.4| Mus musculus BAC clone RP23-127L14 from chromosome 13, complete sequence Length = 207318 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaagaaa 258 ||||| ||||||||||||||||||| Sbjct: 49342 gaggaaggaaggaaggaagaagaaa 49366
>gb|AC125533.4| Mus musculus BAC clone RP23-451C1 from chromosome 5, complete sequence Length = 180892 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 133886 aggagggaaggaaggaagaag 133906
>gb|AC123948.4| Mus musculus BAC clone RP23-105C3 from chromosome 10, complete sequence Length = 214819 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 26968 aggaaggaaggaaggaagaagaaag 26992
>gb|AF441733.2| Mus musculus clone RP23-225M6 45S pre-ribosomal RNA gene, partial sequence; and intergenic spacer, partial sequence Length = 31129 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 11187 aggaaggaaggaaggaagaagaaag 11163 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaa 258 |||| ||||||||||||||||||| Sbjct: 25491 aggaaggaaggaaggaagaagaaa 25468 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaa 258 |||| ||||||||||||||||||| Sbjct: 18724 aggaaggaaggaaggaagaagaaa 18701
>gb|AC126256.4| Mus musculus BAC clone RP24-235B15 from chromosome 7, complete sequence Length = 188677 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||| |||||||||||| Sbjct: 150150 aggagggaaggagggaagaagaaag 150174
>gb|AC131702.3| Mus musculus BAC clone RP24-177J5 from chromosome 7, complete sequence Length = 154632 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 6875 aggaaggaaggaaggaagaagaaag 6899
>gb|AC122923.4| Mus musculus BAC clone RP23-36G5 from 10, complete sequence Length = 242112 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 180629 aggaaggaaggaaggaagaagaaag 180605
>gb|AC122916.4| Mus musculus BAC clone RP23-28F1 from 5, complete sequence Length = 231319 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 201292 aggaaggaaggaaggaagaagaaag 201316 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 107828 aggaaggaaggaaggaagaagaaag 107852
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 11021 aggaaggaaggaaggaagaagaaag 10997
>gb|AC129333.4| Mus musculus BAC clone RP23-104F23 from 6, complete sequence Length = 216849 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 210244 aggaaggaaggaaggaagaagaaag 210268
>gb|AC124733.4| Mus musculus BAC clone RP23-306C18 from 12, complete sequence Length = 206837 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 36428 aggaaggaaggaaggaagaagaaag 36452
>gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, complete sequence Length = 196923 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 166975 aggaaggaaggaaggaagaagaaag 166999
>gb|AC121610.2| Mus musculus BAC clone RP23-326L12 from 10, complete sequence Length = 192060 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 80285 aggaaggaaggaaggaagaagaaag 80309
>gb|AC116329.3| Mus musculus BAC clone RP24-290C19 from 5, complete sequence Length = 170072 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 66069 aggaaggaaggaaggaagaagaaag 66045
>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence Length = 186217 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 106451 aggaaggaaggaaggaagaagaaag 106475
>gb|AC117608.13| Mus musculus chromosome 14, clone RP23-100O3, complete sequence Length = 210905 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 180874 aggaaggaaggaaggaagaagaaag 180850
>gb|AC098731.3| Mus musculus BAC clone RP23-3L10 from 9, complete sequence Length = 220184 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 7335 aggaaggaaggaaggaagaagaaag 7359 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 7272 aggaaggaaggaaggaagaagaaag 7296
>gb|AC073133.9| Homo sapiens BAC clone RP11-691F21 from 7, complete sequence Length = 95280 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 39169 gaggagggaaggaaggaagaa 39189
>gb|AC005049.2| Homo sapiens BAC clone CTB-23I15 from 7, complete sequence Length = 106928 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 18241 aggaaggaaggaaggaagaagaaag 18265
>gb|AC004454.1| Homo sapiens PAC clone RP5-988L12 from 7, complete sequence Length = 80514 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 37375 aggaaggaaggaaggaagaagaaag 37351
>gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, complete sequence Length = 232012 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 183183 aggaaggaaggaaggaagaagaaag 183159
>gb|AC102114.9| Mus musculus chromosome 10, clone RP23-139F20, complete sequence Length = 232173 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 56522 aggagggaaggaaggaagaag 56542
>gb|AC110245.10| Mus musculus chromosome 3, clone RP23-251B16, complete sequence Length = 241132 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 104269 aggaaggaaggaaggaagaagaaag 104293
>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence Length = 126187 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 ggaagaagaaagtgatgatgg 268 ||||||||||||||||||||| Sbjct: 28777 ggaagaagaaagtgatgatgg 28757
>gb|AC146940.19| Medicago truncatula clone mth2-132l6, complete sequence Length = 125567 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaagt 260 ||||||||||||||||||||| Sbjct: 94054 ggaaggaaggaagaagaaagt 94034
>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 Length = 340000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 318441 aggaaggaaggaaggaagaagaaag 318417 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaa 254 |||||||||||||||||||| Sbjct: 290475 aggagggaaggaaggaagaa 290494
>emb|AL163278.2|HS21C078 Homo sapiens chromosome 21 segment HS21C078 Length = 340000 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||| |||||| Sbjct: 288507 aggagggaaggaaggaaggagaaag 288531
>gb|AC138017.15| Medicago truncatula clone mth2-6i3, complete sequence Length = 129585 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 ggaaggaaggaagaagaaagt 260 ||||||||||||||||||||| Sbjct: 31463 ggaaggaaggaagaagaaagt 31483
>emb|BX649635.3| Human DNA sequence from clone WI2-82904A1 on chromosome X, complete sequence Length = 43709 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 34647 aggaaggaaggaaggaagaagaaag 34671 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 35549 ggaaggaaggaagaagaaag 35530 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 34739 ggaaggaaggaagaagaaag 34758
>emb|BX322532.2| Human DNA sequence from clone RP11-543A11 on chromosome 1 Contains the 5' end of the gene for a novel protein (FLJ16613) and the 5' end of one variant of the OPN3 gene for opsin 3 (encephalopsin, panopsin), complete sequence Length = 40220 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||| |||||||||||||||| Sbjct: 26986 aggagggagggaaggaagaagaaag 26962
>emb|AL592430.8| Human DNA sequence from clone RP11-388P9 on chromosome 10 Contains part of the ANK3 gene for ankyrin 3, node of Ranvier (ankyrin G) and a novel gene, complete sequence Length = 145136 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 121532 aggaaggaaggaaggaagaagaaag 121508
>emb|AL590222.4| Human DNA sequence from clone RP11-159L8 on chromosome Xq13.2-21.2 Contains the gene for a putative purinergic receptor (FKSG79), complete sequence Length = 166810 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 34572 aggagggaaggaaggaagaag 34552
>emb|AL512631.11| Human DNA sequence from clone RP11-138I18 on chromosome 10 Contains the 5' end of the gene for a protein related to the N terminus of tre (RNTRE) (KIAA0019) and a CpG island, complete sequence Length = 142863 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 79934 aggaaggaaggaaggaagaagaaag 79958
>emb|AL513524.8| Human DNA sequence from clone RP11-295F4 on chromosome 6 Contains a ribosomal protein L21 (RPL21) pseudogene, a trace amine receptor 3 (TAR3) pseudogene, the GPR102 gene for G protein-coupled receptor 102 (TA5, TAR5), the gene for trace amine receptor 4 (TA4), the gene for a novel trace amine receptor (putative neurotransmitter receptor, PNR), a trace amine receptor pseudogene, the G protein-coupled receptor 57 (GRP57) pseudogene, the GPR58 gene for G protein-coupled receptor 58 and the gene for trace amine receptor 1 (TA1) (Tar1), complete sequence Length = 141028 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 133693 gaggagggaaggaaggaagaa 133713
>emb|AL445467.6| Human DNA sequence from clone RP11-311M14 on chromosome X Contains the 5' end of the CTPS2 gene for CTP synthase II, the CALB3 gene for calbindin 3 (vitamin D-dependent calcium binding protein), the SYAP1 gene for synapse associated protein 1 SAP47 homolog (Drosophila) and two CpG islands, complete sequence Length = 166336 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 66613 aggagggaaggaaggaagaag 66633
>emb|AL356968.41| Human DNA sequence from clone RP11-329A14 on chromosome 1 Contains the 5' end of the SPATA6 gene for spermatogenesis associated 6, an amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 2 (ALS2CR2) pseudogene, a ribosomal protein L21 (RPL21) pseudogene and a CpG island, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 92442 aggagggaaggaaggaagaag 92462
>emb|AL359208.14| Human DNA sequence from clone RP11-320N6 on chromosome 13, complete sequence Length = 139649 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 70394 aggagggaaggaaggaagaag 70414
>emb|AL160035.19| Human DNA sequence from clone RP11-545M8 on chromosome 13 Contains a novel pseudogene similar to HSPC123, a ribosomal protein S21 (RPS21) pseudogene and a ribosomal protein S20 (RPS20) pseudogene, complete sequence Length = 146168 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 137480 aggaaggaaggaaggaagaagaaag 137456
>emb|AL161714.8| Human DNA sequence from clone RP11-184E24 on chromosome 13 Contains part of a novel gene, complete sequence Length = 95566 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 agggaaggaaggaagaagaaa 258 ||||||||||||||||||||| Sbjct: 11975 agggaaggaaggaagaagaaa 11995
>emb|AL139113.21| Human DNA sequence from clone RP11-176F3 on chromosome 9 Contains the 3' end of the PRSS3 gene for serine protease 3 (mesotrypsin) (MTG, TRY3, TRY4, PRSS4), the 5' end of a novel gene, two novel pseudogenes, a DC2 protein pseudogene, the UBC3B gene for ubiquitin-conjugating enzyme, two novel genes, the 3' end of a novel gene (KIAA1491, FLJ22435, FLJ21704, FLJ22148, FLJ33002) and a CpG island, complete sequence Length = 193280 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 gagggaaggaaggaagaagaa 257 ||||||||||||||||||||| Sbjct: 143248 gagggaaggaaggaagaagaa 143268
>gb|AC097641.6| Homo sapiens, clone RP11-143K11, complete sequence Length = 167127 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gggaaggaaggaagaagaaag 259 ||||||||||||||||||||| Sbjct: 164592 gggaaggaaggaagaagaaag 164612
>gb|AC161813.2| Mus musculus chromosome 5, clone RP23-264M9, complete sequence Length = 154852 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 123892 aggaaggaaggaaggaagaagaaag 123916
>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research Institute) complete sequence Length = 218874 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 66607 aggaaggaaggaaggaagaagaaag 66583
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 510 gatcttgacgtcgccgtggcgggtg 534 ||||||||||||||||| ||||||| Sbjct: 65612 gatcttgacgtcgccgtagcgggtg 65636
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 510 gatcttgacgtcgccgtggcgggtg 534 ||||||||||||||||| ||||||| Sbjct: 178799 gatcttgacgtcgccgtagcgggtg 178823
>gb|AC156281.4| Mus musculus 6 BAC RP24-311B6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 197360 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 123335 aggaaggaaggaaggaagaagaaag 123311
>emb|AL772268.6| Mouse DNA sequence from clone RP23-465I4 on chromosome 11 Contains the 5' end of the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, a novel pseudogene and the 3' end of the Sparc gene for secreted acidic cysteine rich glycoprotein, complete sequence Length = 86314 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||| |||||| Sbjct: 54204 aggagggaaggaaggaaggagaaag 54228
>emb|AL662838.12| Mouse DNA sequence from clone RP23-378I13 on chromosome 11 Contains the 3' end of the Mbtd1 gene for mbt domain containing 1, the Nme2 gene for expressed in non-metastatic cells 2 protein, the Nme1 gene for expressed in non-metastatic cells 1 protein, the Spag9 gene for sperm associated antigen 9 and a ribosomal protein L27 (Rpl27) pseudogene, complete sequence Length = 215435 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 82367 gaggagggaaggaaggaagaa 82347
>emb|AL627215.12| Mouse DNA sequence from clone RP23-292E3 on chromosome 11, complete sequence Length = 216106 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 194243 aggaaggaaggaaggaagaagaaag 194219
>emb|AL021127.2|MMCMX137 Mus musculus chromosome X contigA; putative Magea9 gene, Caltractin, NAD(P) steroid dehydrogenase and Zinc finger protein 185 Length = 195025 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 126478 aggaaggaaggaaggaagaagaaag 126454
>gb|AC162913.3| Mus musculus BAC clone RP24-409P22 from chromosome 3, complete sequence Length = 175922 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 63620 aggaaggaaggaaggaagaagaaag 63596
>emb|BX284637.10| Zebrafish DNA sequence from clone DKEY-1I9 in linkage group 17, complete sequence Length = 56129 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 15696 aggaaggaaggaaggaagaagaaag 15720
>gb|AC125311.3| Mus musculus BAC clone RP24-325G24 from chromosome 14, complete sequence Length = 162530 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 118655 aggaaggaaggaaggaagaagaaag 118679
>emb|AL645764.15| Mouse DNA sequence from clone RP23-290B5 on chromosome 11 Contains the 5' end of the gene for a novel protein (9330163N21Rik), a ribosomal protein S2 (Rps2) pseudogene, the gene for a novel protein (E130018012Rik), the gene for a novel protein (6820428D13Rik), the Mrpl27 gene for mitochondrial ribosomal protein L27, the Xylt2 gene for xylosyltransferase II, a novel gene (5330426M11Rik), the gene for a novel protein (C230057C09Rik), the gene for a novel protein similar to Cdc34 and two pseudogenes similar to hypothetical protein Tr:Q8C517, complete sequence Length = 203262 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 29518 aggaaggaaggaaggaagaagaaag 29542
>emb|AL672030.10| Mouse DNA sequence from clone RP23-199E12 on chromosome 11, complete sequence Length = 78258 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 3396 aggaaggaaggaaggaagaagaaag 3420
>emb|AL645973.8| Mouse DNA sequence from clone RP23-287B6 on chromosome 11 Contains a pseudogene similar to part of ribosomal protein S2 (Rps2), a mitchondrial ribosomal protein S7 (Rpms7, MRP-S7) (Mrps7) pseudogene, a pseudogene similar to part of a novel protein, a novel gene and a eukaryotic translation initiation factor pseudogene, complete sequence Length = 196006 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 179978 aggaaggaaggaaggaagaagaaag 180002
>emb|AL603702.14| Mouse DNA sequence from clone RP23-406A14 on chromosome 11 Contains a protease (prosome, macropain) 26S subunit ATPase 1 (Psmc1) pseudogene and a CpG island, complete sequence Length = 197265 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 56235 aggaaggaaggaaggaagaagaaag 56259
>emb|AL596180.8| Mouse DNA sequence from clone RP23-243J8 on chromosome 11 Contains the Akap1 gene for A kinase (PRKA) anchor protein 1, complete sequence Length = 76410 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 61322 aggaaggaaggaaggaagaagaaag 61346
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaaga 256 ||||||||||||||||||||| Sbjct: 137642 ggagggaaggaaggaagaaga 137622
>emb|AL732599.5| Mouse DNA sequence from clone RP24-312B5 on chromosome 4 Contains the 5' end of the Tnfsf8 gene for tumor necrosis factor (ligand) superfamily member 8 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 95217 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 55100 aggaaggaaggaaggaagaagaaag 55076
>emb|AL714006.13| Mouse DNA sequence from clone RP23-173E15 on chromosome 4 Contains a novel gene and the 3' end of a novel gene, complete sequence Length = 196097 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 238 agggaaggaaggaagaagaaa 258 ||||||||||||||||||||| Sbjct: 54870 agggaaggaaggaagaagaaa 54890
>gb|AC102287.16| Mus musculus chromosome 8, clone RP24-345M16, complete sequence Length = 179888 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 22484 aggaaggaaggaaggaagaagaaag 22460
>gb|AC155270.3| Mus musculus BAC clone RP23-195H19 from chromosome 12, complete sequence Length = 215502 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||||| |||| Sbjct: 17347 aggagggaaggaaggaagaaaaaag 17323
>gb|AC160132.2| Mus musculus BAC clone RP23-197I12 from chromosome 9, complete sequence Length = 202786 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 97550 aggaaggaaggaaggaagaagaaag 97526
>gb|AC154634.2| Mus musculus BAC clone RP23-298D14 from chromosome 14, complete sequence Length = 218356 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 209380 aggaaggaaggaaggaagaagaaag 209404
>gb|AC163343.2| Mus musculus BAC clone RP23-472D11 from chromosome 13, complete sequence Length = 164331 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 131021 aggaaggaaggaaggaagaagaaag 130997
>gb|AC151827.5| Mus musculus BAC clone RP24-453P17 from chromosome y, complete sequence Length = 166980 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 962 aggaaggaaggaaggaagaagaaag 938
>gb|AC158563.5| Mus musculus chromosome 15, clone RP24-143I20, complete sequence Length = 133860 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 57206 aggaaggaaggaaggaagaagaaag 57182
>gb|AE014182.1| Mus musculus piebald deletion region section 10 of 11 of the complete sequence Length = 400029 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 155232 aggagggaaggaaggaagaag 155212
>gb|AC087518.5| Homo sapiens chromosome , clone RP11-359E19, complete sequence Length = 168531 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 163256 aggaaggaaggaaggaagaagaaag 163232 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaaggaaggaagaagaaag 259 |||||||||||||||||||| Sbjct: 163282 ggaaggaaggaagaagaaag 163263
>gb|AC091160.6| Homo sapiens chromosome 8, clone CTD-2025J6, complete sequence Length = 215326 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 19619 aggagggaaggaaggaagaag 19599
>gb|AC011462.4| Homo sapiens chromosome 19 clone CTC-435M10, complete sequence Length = 148841 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||||||||||||||||| |||||| Sbjct: 51293 aggagggaaggaaggaaggagaaag 51269
>dbj|BS000651.1| Pan troglodytes chromosome Y clone: PTBY-012K02, complete sequence Length = 162358 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 21040 gaggagggaaggaaggaagaa 21060
>dbj|BS000559.1| Pan troglodytes chromosome Y clone:PTB-473B14, complete sequences Length = 127252 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 11315 gaggagggaaggaaggaagaa 11335
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 234 gaggagggaaggaaggaagaa 254 ||||||||||||||||||||| Sbjct: 16670419 gaggagggaaggaaggaagaa 16670399 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggagggaaggaaggaagaag 255 |||||||||||||||||||| Sbjct: 17593290 ggagggaaggaaggaagaag 17593271
>emb|CR609609.1| full-length cDNA clone CS0DN004YK12 of Adult brain of Homo sapiens (human) Length = 1324 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 taactgtaacactcactgtaacaat 142 ||||||||||||| ||||||||||| Sbjct: 1211 taactgtaacactaactgtaacaat 1235
>gb|DP000062.1| Sus scrofa target 117 genomic scaffold Length = 605739 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 377564 aggaaggaaggaaggaagaagaaag 377588
>gb|AC093106.3| Homo sapiens chromosome 7 clone CTD-2502H6, complete sequence Length = 177806 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaag 255 ||||||||||||||||||||| Sbjct: 56877 aggagggaaggaaggaagaag 56857
>gb|AC113406.2| Homo sapiens chromosome 5 clone RP11-471O19, complete sequence Length = 147183 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 235 aggagggaaggaaggaagaagaaag 259 |||| |||||||||||||||||||| Sbjct: 16147 aggaaggaaggaaggaagaagaaag 16123 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,640,188 Number of Sequences: 3902068 Number of extensions: 6640188 Number of successful extensions: 590042 Number of sequences better than 10.0: 910 Number of HSP's better than 10.0 without gapping: 911 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 572504 Number of HSP's gapped (non-prelim): 17519 length of query: 706 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 683 effective length of database: 17,143,297,704 effective search space: 11708872331832 effective search space used: 11708872331832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
