Clone Information

BLAST Search Result

Clone Name	rbasd2f06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK119574.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	511	e-142
2	dbj\|AK069706.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	511	e-142
3	ref\|XM_481414.1\| Oryza sativa (japonica cultivar-group), mRNA	500	e-138
4	gb\|AY108443.1\| Zea mays PCO082434 mRNA sequence	404	e-109
5	gb\|AY360394.1\| Oryza sativa (japonica cultivar-group) chromosome...	242	1e-60
6	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
7	dbj\|AP004458.2\| Oryza sativa (japonica cultivar-group) genomic D...	242	1e-60
8	ref\|NM_121148.1\| Arabidopsis thaliana unknown protein AT5G11100 ...	68	4e-08
9	emb\|AL391222.1\|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC...	68	4e-08
10	ref\|NM_100429.1\| Arabidopsis thaliana unknown protein AT1G05500 ...	56	1e-04
11	gb\|BT008907.1\| Arabidopsis thaliana At1g05500 mRNA, complete cds	56	1e-04
12	gb\|AY140038.1\| Arabidopsis thaliana Ca2+-dependent lipid-binding...	56	1e-04
13	ref\|XM_474098.1\| Oryza sativa (japonica cultivar-group), predic...	50	0.009
14	gb\|BT013623.1\| Lycopersicon esculentum clone 132425F, mRNA sequence	50	0.009
15	gb\|AC005106.2\|AC005106 Genomic sequence for Arabidopsis thaliana...	48	0.035
16	gb\|AC007153.2\| Arabidopsis thaliana chromosome I BAC F3F20 genom...	48	0.035
17	emb\|BX538352.1\| Cryptosporidium parvum chromosome 6, complete se...	44	0.55
18	gb\|AC069435.19\| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Canc...	44	0.55
19	ref\|XM_627701.1\| Cryptosporidium parvum Iowa II 26S proteasome r...	44	0.55
20	gb\|AC023158.28\| Homo sapiens 12 BAC RP11-438D14 (Roswell Park Ca...	44	0.55
21	gb\|AC113720.6\| Rattus norvegicus 1 BAC CH230-117B1 (Children's H...	42	2.2
22	gb\|AC135230.8\| Medicago truncatula clone mth2-23e14, complete se...	42	2.2
23	gb\|AC148405.5\| Medicago truncatula clone mth2-37m7, complete seq...	42	2.2
24	gb\|AC137829.23\| Medicago truncatula clone mth2-34j5, complete se...	42	2.2
25	emb\|AL138689.22\| Human DNA sequence from clone RP11-272L14 on ch...	42	2.2
26	emb\|AL606445.2\|OSJN00018 Oryza sativa genomic DNA, chromosome 4,...	42	2.2
27	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.2
28	dbj\|AK062763.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	42	2.2
29	emb\|AL732331.2\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	42	2.2
30	emb\|AL606454.3\|OSJN00009 Oryza sativa genomic DNA, chromosome 4,...	42	2.2
31	gb\|AC169511.1\| Mus musculus BAC clone RP23-81P24 from chromosome...	40	8.6
32	gb\|AF509496.1\| Chlamydomonas reinhardtii strain CC-125 putative ...	40	8.6
33	ref\|XM_844187.1\| PREDICTED: Canis familiaris similar to secreted...	40	8.6
34	emb\|CR956426.6\| Pig DNA sequence from clone CH242-42M23 on chrom...	40	8.6
35	emb\|CT009558.5\| M.truncatula DNA sequence from clone MTH2-72I11 ...	40	8.6
36	gb\|AC004513.1\|HUAC004513 Homo sapiens Chromosome 16 BAC clone CI...	40	8.6
37	gb\|AC159647.2\| Mus musculus BAC clone RP23-66A14 from chromosome...	40	8.6
38	emb\|CR956375.5\| Pig DNA sequence from clone CH242-268P22 on chro...	40	8.6
39	gb\|AC154393.8\| Mus musculus chromosome 1, clone RP23-64O1, compl...	40	8.6
40	gb\|DP000042.1\| Lemur catta target 106 genomic scaffold	40	8.6
41	gb\|AF509497.1\| Chlamydomonas reinhardtii strain C-9 putative amt...	40	8.6
42	gb\|AC156568.3\| Mus musculus BAC clone RP23-291D3 from chromosome...	40	8.6
43	gb\|AC090497.2\|AC090497 Homo sapiens chromosome 7 clone RP11-643E...	40	8.6
44	gb\|AC040174.5\| Homo sapiens chromosome 16 clone RP11-96H17, comp...	40	8.6
45	gb\|AC083862.2\|AC083862 Homo sapiens chromosome 7 clone RP11-134L...	40	8.6
46	emb\|AJ000238.1\|HVJ000238 Hordeum vulgare mRNA for expressed sequ...	40	8.6
47	emb\|AL732343.2\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	40	8.6
48	gb\|AF148956.1\|AF148956 Oryctolagus cuniculus lens-specific calpa...	40	8.6

>dbj|AK119574.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B03, full
            insert sequence
          Length = 2075

 Score =  511 bits (258), Expect = e-142
 Identities = 414/466 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 219
            ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 1904 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 1845

                                                                        
Query: 220  agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 279
            |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 1844 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 1785

                                                                        
Query: 280  cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatg 339
            |||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1784 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacg 1725

                                                                        
Query: 340  tatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaat 399
            ||||||| ||||||||||||||||| || |||||||||| ||||||||| || |||||||
Sbjct: 1724 tatcatgatcccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaat 1665

                                                                        
Query: 400  caaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtcttctttttgg 459
            |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1664 caaacgtctgattccatattggattcagtgtctcagttacaacccttgtcttctttttgg 1605

                                                                        
Query: 460  tttcccccttcttcaggtacaggaccacaaatgggtcagccttccccatcacatccattg 519
            |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1604 tttctcccttcttcaggtacaggactacaaatgggtcagccttgcccatcacatccattg 1545

                                                                        
Query: 520  ctggtatgtcctctgcagatataacagttactgaaaggactcctctcgtaataacattct 579
             ||| | ||||||||| || |||||||||||||| |||||||||||| |||||||||| |
Sbjct: 1544 gtggcaagtcctctgctgagataacagttactgataggactcctctcataataacatttt 1485

                                                          
Query: 580  tcctctggttgacatcatatccattagattccgtcttgaggacctt 625
            |||||||||| |||||| |||| ||||| || ||||||||||||||
Sbjct: 1484 tcctctggttaacatcaaatccgttagactcagtcttgaggacctt 1439

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>dbj|AK069706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028A22, full
            insert sequence
          Length = 2255

 Score =  511 bits (258), Expect = e-142
 Identities = 414/466 (88%)
 Strand = Plus / Minus

                                                                        
Query: 160  tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 219
            ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 1905 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 1846

                                                                        
Query: 220  agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 279
            |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 1845 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 1786

                                                                        
Query: 280  cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatg 339
            |||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1785 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacg 1726

                                                                        
Query: 340  tatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaat 399
            ||||||| ||||||||||||||||| || |||||||||| ||||||||| || |||||||
Sbjct: 1725 tatcatgatcccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaat 1666

                                                                        
Query: 400  caaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtcttctttttgg 459
            |||| |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 1665 caaacgtctgattccatattggattcagtgtctcagttacaacccttgtcttctttttgg 1606

                                                                        
Query: 460  tttcccccttcttcaggtacaggaccacaaatgggtcagccttccccatcacatccattg 519
            |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 1605 tttctcccttcttcaggtacaggactacaaatgggtcagccttgcccatcacatccattg 1546

                                                                        
Query: 520  ctggtatgtcctctgcagatataacagttactgaaaggactcctctcgtaataacattct 579
             ||| | ||||||||| || |||||||||||||| |||||||||||| |||||||||| |
Sbjct: 1545 gtggcaagtcctctgctgagataacagttactgataggactcctctcataataacatttt 1486

                                                          
Query: 580  tcctctggttgacatcatatccattagattccgtcttgaggacctt 625
            |||||||||| |||||| |||| ||||| || ||||||||||||||
Sbjct: 1485 tcctctggttaacatcaaatccgttagactcagtcttgaggacctt 1440

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>ref|XM_481414.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1698

 Score =  500 bits (252), Expect = e-138
 Identities = 405/456 (88%)
 Strand = Plus / Minus

                                                                        
Query: 170  tcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttgaagtgcaggtt 229
            |||||| ||||  ||||||||||| ||||||||||| | |||||| |||||||||| |||
Sbjct: 1698 tcactggtcccgatcacgatcacgataaattggctgcggcgtccacttgaagtgcaagtt 1639

                                                                        
Query: 230  cagccttccagatttagcaccttgcagcgcatatgtatcttggaactcaccttcaagtat 289
            |||| |||| ||||||||||||||||   || |   ||| || ||||| ||||| |||||
Sbjct: 1638 cagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgccttcgagtat 1579

                                                                        
Query: 290  cgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtc 349
              |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 1578 tactctcgtaagtgtcaagatgcatctccctatgtaatcctttccaaacgtatcatgatc 1519

                                                                        
Query: 350  ccatacttccaccataagcaaatcatgcagggcatcttctactacaaaatcaaatgtctg 409
            ||||||||||||||| || |||||||||| ||||||||| || ||||||||||| |||||
Sbjct: 1518 ccatacttccaccatgagtaaatcatgcaaggcatcttcaacaacaaaatcaaacgtctg 1459

                                                                        
Query: 410  attccatatcggattcaatgtctcagtcacaacccttgtcttctttttggtttccccctt 469
            ||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 1458 attccatattggattcagtgtctcagttacaacccttgtcttctttttggtttctccctt 1399

                                                                        
Query: 470  cttcaggtacaggaccacaaatgggtcagccttccccatcacatccattgctggtatgtc 529
            ||||||||||||||| ||||||||||||||||| |||||||||||||||| ||| | |||
Sbjct: 1398 cttcaggtacaggactacaaatgggtcagccttgcccatcacatccattggtggcaagtc 1339

                                                                        
Query: 530  ctctgcagatataacagttactgaaaggactcctctcgtaataacattcttcctctggtt 589
            |||||| || |||||||||||||| |||||||||||| |||||||||| |||||||||||
Sbjct: 1338 ctctgctgagataacagttactgataggactcctctcataataacatttttcctctggtt 1279

                                                
Query: 590  gacatcatatccattagattccgtcttgaggacctt 625
             |||||| |||| ||||| || ||||||||||||||
Sbjct: 1278 aacatcaaatccgttagactcagtcttgaggacctt 1243

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>gb|AY108443.1| Zea mays PCO082434 mRNA sequence
          Length = 1548

 Score =  404 bits (204), Expect = e-109
 Identities = 393/456 (86%)
 Strand = Plus / Minus

                                                                        
Query: 170  tcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttgaagtgcaggtt 229
            |||||||||||||||||||||||| || |||||||||| |||||| ||||| |||| |||
Sbjct: 1182 tcactgatccctgtcacgatcacgatagattggctgtggcgtccacttgaaatgcaagtt 1123

                                                                        
Query: 230  cagccttccagatttagcaccttgcagcgcatatgtatcttggaactcaccttcaagtat 289
             ||  |||| ||||| ||||||||||   || | ||||||||||| |||||||| |||||
Sbjct: 1122 tagttttcccgatttggcaccttgcaagacaaaggtatcttggaattcaccttcgagtat 1063

                                                                        
Query: 290  cgctctggtaagtgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtc 349
              |||| || |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1062 aactctcgtcagtgtcaagatgcacctccctatgtaatcctttccaaatgtatcatggtc 1003

                                                                        
Query: 350  ccatacttccaccataagcaaatcatgcagggcatcttctactacaaaatcaaatgtctg 409
            ||||||||||||||| |||||||||||||| ||||||||||| |  ||||||||||||||
Sbjct: 1002 ccatacttccaccatgagcaaatcatgcagtgcatcttctaccatgaaatcaaatgtctg 943

                                                                        
Query: 410  attccatatcggattcaatgtctcagtcacaacccttgtcttctttttggtttccccctt 469
             |||||||| ||||| || || || ||||||||||| ||||||||||||||||| |||||
Sbjct: 942  gttccatattggatttaacgtgtctgtcacaaccctcgtcttctttttggtttctccctt 883

                                                                        
Query: 470  cttcaggtacaggaccacaaatgggtcagccttccccatcacatccattgctggtatgtc 529
            ||| | ||||||||||||||||||||||||||| ||    |  ||||| | ||| |  ||
Sbjct: 882  ctttaagtacaggaccacaaatgggtcagccttgccaccaatgtccataggtggcaactc 823

                                                                        
Query: 530  ctctgcagatataacagttactgaaaggactcctctcgtaataacattcttcctctggtt 589
            |||||||||||| || || || ||||||||||||||| |||||||||| |||||||| ||
Sbjct: 822  ctctgcagatatgaccgtcaccgaaaggactcctctcataataacatttttcctctgatt 763

                                                
Query: 590  gacatcatatccattagattccgtcttgaggacctt 625
             | ||||||||||||||| || || ||||| |||||
Sbjct: 762  aatatcatatccattagactcggttttgagaacctt 727

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>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19,
             complete sequence
          Length = 158749

 Score =  242 bits (122), Expect = 1e-60
 Identities = 170/186 (91%)
 Strand = Plus / Minus

                                                                         
Query: 440   aacccttgtcttctttttggtttcccccttcttcaggtacaggaccacaaatgggtcagc 499
             |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 68185 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 68126

                                                                         
Query: 500   cttccccatcacatccattgctggtatgtcctctgcagatataacagttactgaaaggac 559
             ||| |||||||||||||||| ||| | ||||||||| || |||||||||||||| |||||
Sbjct: 68125 cttgcccatcacatccattggtggcaagtcctctgctgagataacagttactgataggac 68066

                                                                         
Query: 560   tcctctcgtaataacattcttcctctggttgacatcatatccattagattccgtcttgag 619
             ||||||| |||||||||| ||||||||||| |||||| |||| ||||| || ||||||||
Sbjct: 68065 tcctctcataataacatttttcctctggttaacatcaaatccgttagactcagtcttgag 68006

                   
Query: 620   gacctt 625
             ||||||
Sbjct: 68005 gacctt 68000



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Minus

                                                                         
Query: 328   cctttccaaatgtatcatggtcccatacttccaccataagcaaatcatgcagggcatctt 387
             |||||||||| |||||||| ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 68402 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 68343

                                                                     
Query: 388   ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 443
             | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 68342 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 68287



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Minus

                                                                         
Query: 160   tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 219
             ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 69177 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 69118

                                                                         
Query: 220   agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 279
             |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 69117 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 69058

                                                                
Query: 280   cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 330
             |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 69057 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 69007

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  242 bits (122), Expect = 1e-60
 Identities = 170/186 (91%)
 Strand = Plus / Plus

                                                                            
Query: 440      aacccttgtcttctttttggtttcccccttcttcaggtacaggaccacaaatgggtcagc 499
                |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 12325646 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 12325705

                                                                            
Query: 500      cttccccatcacatccattgctggtatgtcctctgcagatataacagttactgaaaggac 559
                ||| |||||||||||||||| ||| | ||||||||| || |||||||||||||| |||||
Sbjct: 12325706 cttgcccatcacatccattggtggcaagtcctctgctgagataacagttactgataggac 12325765

                                                                            
Query: 560      tcctctcgtaataacattcttcctctggttgacatcatatccattagattccgtcttgag 619
                ||||||| |||||||||| ||||||||||| |||||| |||| ||||| || ||||||||
Sbjct: 12325766 tcctctcataataacatttttcctctggttaacatcaaatccgttagactcagtcttgag 12325825

                      
Query: 620      gacctt 625
                ||||||
Sbjct: 12325826 gacctt 12325831



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                            
Query: 328      cctttccaaatgtatcatggtcccatacttccaccataagcaaatcatgcagggcatctt 387
                |||||||||| |||||||| ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 12325429 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 12325488

                                                                        
Query: 388      ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 443
                | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 12325489 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 12325544



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Plus

                                                                            
Query: 160      tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 219
                ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 12324654 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 12324713

                                                                            
Query: 220      agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 279
                |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 12324714 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 12324773

                                                                   
Query: 280      cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 330
                |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 12324774 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 12324824

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>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0045D08
          Length = 160541

 Score =  242 bits (122), Expect = 1e-60
 Identities = 170/186 (91%)
 Strand = Plus / Plus

                                                                         
Query: 440   aacccttgtcttctttttggtttcccccttcttcaggtacaggaccacaaatgggtcagc 499
             |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 84295 aacccttgtcttctttttggtttctcccttcttcaggtacaggactacaaatgggtcagc 84354

                                                                         
Query: 500   cttccccatcacatccattgctggtatgtcctctgcagatataacagttactgaaaggac 559
             ||| |||||||||||||||| ||| | ||||||||| || |||||||||||||| |||||
Sbjct: 84355 cttgcccatcacatccattggtggcaagtcctctgctgagataacagttactgataggac 84414

                                                                         
Query: 560   tcctctcgtaataacattcttcctctggttgacatcatatccattagattccgtcttgag 619
             ||||||| |||||||||| ||||||||||| |||||| |||| ||||| || ||||||||
Sbjct: 84415 tcctctcataataacatttttcctctggttaacatcaaatccgttagactcagtcttgag 84474

                   
Query: 620   gacctt 625
             ||||||
Sbjct: 84475 gacctt 84480



 Score =  143 bits (72), Expect = 8e-31
 Identities = 105/116 (90%)
 Strand = Plus / Plus

                                                                         
Query: 328   cctttccaaatgtatcatggtcccatacttccaccataagcaaatcatgcagggcatctt 387
             |||||||||| |||||||| ||||||||||||||||| || |||||||||| ||||||||
Sbjct: 84078 cctttccaaacgtatcatgatcccatacttccaccatgagtaaatcatgcaaggcatctt 84137

                                                                     
Query: 388   ctactacaaaatcaaatgtctgattccatatcggattcaatgtctcagtcacaacc 443
             | || ||||||||||| |||||||||||||| ||||||| ||||||||| ||||||
Sbjct: 84138 caacaacaaaatcaaacgtctgattccatattggattcagtgtctcagttacaacc 84193



 Score =  141 bits (71), Expect = 3e-30
 Identities = 146/171 (85%)
 Strand = Plus / Plus

                                                                         
Query: 160   tacacaggtttcactgatccctgtcacgatcacggtaaattggctgtgccgtccatttga 219
             ||||||| |||||||| ||||  ||||||||||| ||||||||||| | |||||| ||||
Sbjct: 83303 tacacagatttcactggtcccgatcacgatcacgataaattggctgcggcgtccacttga 83362

                                                                         
Query: 220   agtgcaggttcagccttccagatttagcaccttgcagcgcatatgtatcttggaactcac 279
             |||||| ||||||| |||| ||||||||||||||||   || |   ||| || ||||| |
Sbjct: 83363 agtgcaagttcagctttccggatttagcaccttgcaaaacaaactcatcctgaaactcgc 83422

                                                                
Query: 280   cttcaagtatcgctctggtaagtgtcaagatgcatctccctatgtaatcct 330
             |||| |||||  |||| ||||||||||||||||||||||||||||||||||
Sbjct: 83423 cttcgagtattactctcgtaagtgtcaagatgcatctccctatgtaatcct 83473

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>ref|NM_121148.1| Arabidopsis thaliana unknown protein AT5G11100 mRNA, complete cds
          Length = 1725

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 94/114 (82%)
 Strand = Plus / Minus

                                                                        
Query: 314  tctccctatgtaatcctttccaaatgtatcatggtcccatacttccaccataagcaaatc 373
            ||||||||| |  ||||| |||||| | ||||||||||||||||| | | | |  | |||
Sbjct: 1590 tctccctatcttgtccttgccaaatttgtcatggtcccatacttcaagcgtcaatagatc 1531

                                                                  
Query: 374  atgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
            |||||  |||||||| |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 1530 atgcaaagcatcttccactacaaaatcaaacgtctggttccaaaccggattcaa 1477

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>emb|AL391222.1|ATT5K6 Arabidopsis thaliana DNA chromosome 5, BAC clone T5K6 (ESSA project)
          Length = 96379

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 94/114 (82%)
 Strand = Plus / Minus

                                                                         
Query: 314   tctccctatgtaatcctttccaaatgtatcatggtcccatacttccaccataagcaaatc 373
             ||||||||| |  ||||| |||||| | ||||||||||||||||| | | | |  | |||
Sbjct: 86226 tctccctatcttgtccttgccaaatttgtcatggtcccatacttcaagcgtcaatagatc 86167

                                                                   
Query: 374   atgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
             |||||  |||||||| |||||||||||||| ||||| ||||| | |||||||||
Sbjct: 86166 atgcaaagcatcttccactacaaaatcaaacgtctggttccaaaccggattcaa 86113

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>ref|NM_100429.1| Arabidopsis thaliana unknown protein AT1G05500 mRNA, complete cds
          Length = 1587

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  catctccctatgtaatcctttccaaatgtatcatggtcccatacttccaccataagcaaa 371
            |||||||| ||||| ||||||||||| || || |||||||| ||||| |  |  |||| |
Sbjct: 1457 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1398

                                                                    
Query: 372  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1397 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1342

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>gb|BT008907.1| Arabidopsis thaliana At1g05500 mRNA, complete cds
          Length = 1683

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  catctccctatgtaatcctttccaaatgtatcatggtcccatacttccaccataagcaaa 371
            |||||||| ||||| ||||||||||| || || |||||||| ||||| |  |  |||| |
Sbjct: 1553 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1494

                                                                    
Query: 372  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1493 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1438

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>gb|AY140038.1| Arabidopsis thaliana Ca2+-dependent lipid-binding protein, putative
            (At1g05500) mRNA, complete cds
          Length = 2052

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 312  catctccctatgtaatcctttccaaatgtatcatggtcccatacttccaccataagcaaa 371
            |||||||| ||||| ||||||||||| || || |||||||| ||||| |  |  |||| |
Sbjct: 1676 catctcccaatgtagtcctttccaaaggtgtcgtggtcccagacttcaaggactagcata 1617

                                                                    
Query: 372  tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
            ||||| |   | ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 1616 tcatgtaacccgtcttcaactacaaaatcaaaagtctggttccataccgggttcaa 1561

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>ref|XM_474098.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1728

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 91/113 (80%)
 Strand = Plus / Minus

                                                                        
Query: 339  gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
            |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 1544 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 1485

                                                                 
Query: 399  tcaaatgtctgattccatatcggattcaatgtctcagtcacaacccttgtctt 451
            ||||| || || ||||| |  ||||||||  | ||  ||||||||||||||||
Sbjct: 1484 tcaaaagtttggttccaaactggattcaagctttcgctcacaacccttgtctt 1432

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>gb|BT013623.1| Lycopersicon esculentum clone 132425F, mRNA sequence
          Length = 2230

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                     
Query: 302  tgtcaagatgcatctccctatgtaatcctttccaaatgtatcatggtcccatacttc 358
            |||||| ||||| || || |||||||||||||| || || ||||||||||| |||||
Sbjct: 1738 tgtcaatatgcaccttcccatgtaatcctttccgaaggtgtcatggtcccaaacttc 1682

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>gb|AC005106.2|AC005106 Genomic sequence for Arabidopsis thaliana BAC T25N20 from chromosome I,
             complete sequence
          Length = 84203

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 384   tcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
             ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 60660 tcttcaactacaaaatcaaaagtctggttccataccgggttcaa 60617

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>gb|AC007153.2| Arabidopsis thaliana chromosome I BAC F3F20 genomic sequence, complete
             sequence
          Length = 103223

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 384   tcttctactacaaaatcaaatgtctgattccatatcggattcaa 427
             ||||| |||||||||||||| ||||| ||||||| ||| |||||
Sbjct: 10111 tcttcaactacaaaatcaaaagtctggttccataccgggttcaa 10068

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>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 588   ttgacatcatatccattagatt 609
             ||||||||||||||||||||||
Sbjct: 97973 ttgacatcatatccattagatt 97994

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>gb|AC069435.19| Homo sapiens 3 BAC RP11-384L1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 111861

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 389   tactacaaaatcaaatgtctga 410
             ||||||||||||||||||||||
Sbjct: 68900 tactacaaaatcaaatgtctga 68921

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>ref|XM_627701.1| Cryptosporidium parvum Iowa II 26S proteasome regulatory subunit
           Rpn6-like; PINT domain containing protein (cgd6_3590),
           partial mRNA
          Length = 1269

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 588 ttgacatcatatccattagatt 609
           ||||||||||||||||||||||
Sbjct: 292 ttgacatcatatccattagatt 271

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>gb|AC023158.28| Homo sapiens 12 BAC RP11-438D14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146530

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 23    catatacagaataatattttat 44
             ||||||||||||||||||||||
Sbjct: 83504 catatacagaataatattttat 83483

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>gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 249629

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 540    ataacagttactgaaaggact 560
              |||||||||||||||||||||
Sbjct: 158400 ataacagttactgaaaggact 158420

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>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 423   ttcaatgtctcagtcacaacccttg 447
             ||||||||||| |||||||||||||
Sbjct: 92895 ttcaatgtctctgtcacaacccttg 92919

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>gb|AC148405.5| Medicago truncatula clone mth2-37m7, complete sequence
          Length = 115984

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 480    aggaccacaaatgggtcagccttccccat 508
              ||||| ||||||||||||||||| |||||
Sbjct: 111981 aggacaacaaatgggtcagccttgcccat 111953

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>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 423   ttcaatgtctcagtcacaacccttg 447
             ||||||||||| |||||||||||||
Sbjct: 33586 ttcaatgtctctgtcacaacccttg 33562

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>emb|AL138689.22| Human DNA sequence from clone RP11-272L14 on chromosome 13 Contains the
             EFNB2 gene for ephrin-B2 (HTKL EPLG5 LERK5)and a CpG
             island, complete sequence
          Length = 103616

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 437   cacaacccttgtcttcttttt 457
             |||||||||||||||||||||
Sbjct: 63102 cacaacccttgtcttcttttt 63122

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>emb|AL606445.2|OSJN00018 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070O11,
            complete sequence
          Length = 134231

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 339  gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
            |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 7590 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 7531

                 
Query: 399  tcaaa 403
            |||||
Sbjct: 7530 tcaaa 7526

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                            
Query: 339      gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
                |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 32864741 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 32864682

                     
Query: 399      tcaaa 403
                |||||
Sbjct: 32864681 tcaaa 32864677

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>dbj|AK062763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-H03, full
           insert sequence
          Length = 541

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 339 gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
           |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 78  gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 19

                
Query: 399 tcaaa 403
           |||||
Sbjct: 18  tcaaa 14

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>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete
             sequence
          Length = 76546

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 339   gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
             |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 60034 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 59975

                  
Query: 399   tcaaa 403
             |||||
Sbjct: 59974 tcaaa 59970

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>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05,
              complete sequence
          Length = 142556

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 339    gtatcatggtcccatacttccaccataagcaaatcatgcagggcatcttctactacaaaa 398
              |||||||| ||  ||||||||| |||||||| |||||| |   ||||||| || ||||||
Sbjct: 127028 gtatcatgatcatatacttccaacataagcatatcatgtaaaccatcttcgacaacaaaa 126969

                   
Query: 399    tcaaa 403
              |||||
Sbjct: 126968 tcaaa 126964

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>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence
          Length = 252587

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 387   tctactacaaaatcaaatgtctgattcc 414
             |||||||||||||||| |||||| ||||
Sbjct: 99153 tctactacaaaatcaagtgtctgtttcc 99126

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>gb|AF509496.1| Chlamydomonas reinhardtii strain CC-125 putative amt protein gene,
           complete cds
          Length = 7383

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 ttggctgtgccgtccatttg 218
           ||||||||||||||||||||
Sbjct: 320 ttggctgtgccgtccatttg 301

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>ref|XM_844187.1| PREDICTED: Canis familiaris similar to secreted frizzled-related
           protein 1 (LOC482844), mRNA
          Length = 1277

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 463 cccccttcttcaggtacaggacca 486
           |||| |||||||||||||||||||
Sbjct: 997 ccccattcttcaggtacaggacca 974

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>emb|CR956426.6| Pig DNA sequence from clone CH242-42M23 on chromosome 17, complete
             sequence
          Length = 135274

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 445   ttgtcttctttttggtttcc 464
             ||||||||||||||||||||
Sbjct: 10354 ttgtcttctttttggtttcc 10373

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>emb|CT009558.5| M.truncatula DNA sequence from clone MTH2-72I11 on chromosome 3,
             complete sequence
          Length = 145085

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   acaaaatcaaatgtctgatt 412
             ||||||||||||||||||||
Sbjct: 16435 acaaaatcaaatgtctgatt 16454

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>gb|AC004513.1|HUAC004513 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-926E7, complete
             sequence
          Length = 101311

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   atcggattcaatgtctcagt 436
             ||||||||||||||||||||
Sbjct: 43490 atcggattcaatgtctcagt 43509

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>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence
          Length = 213946

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ttgaagtgcaggttcagcct 235
              ||||||||||||||||||||
Sbjct: 197230 ttgaagtgcaggttcagcct 197211

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>emb|CR956375.5| Pig DNA sequence from clone CH242-268P22 on chromosome 17, complete
            sequence
          Length = 79274

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  ttgtcttctttttggtttcc 464
            ||||||||||||||||||||
Sbjct: 5461 ttgtcttctttttggtttcc 5480

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>gb|AC154393.8| Mus musculus chromosome 1, clone RP23-64O1, complete sequence
          Length = 253733

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     acatatacagaataatattttatg 45
              |||||||||||||| |||||||||
Sbjct: 185069 acatatacagaatactattttatg 185092

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>gb|DP000042.1| Lemur catta target 106 genomic scaffold
          Length = 452647

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    acagaataatattttatgac 47
             ||||||||||||||||||||
Sbjct: 80510 acagaataatattttatgac 80491

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>gb|AF509497.1| Chlamydomonas reinhardtii strain C-9 putative amt protein mRNA,
           complete cds
          Length = 2568

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 ttggctgtgccgtccatttg 218
           ||||||||||||||||||||
Sbjct: 320 ttggctgtgccgtccatttg 301

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>gb|AC156568.3| Mus musculus BAC clone RP23-291D3 from chromosome 12, complete sequence
          Length = 224350

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ttgaagtgcaggttcagcct 235
             ||||||||||||||||||||
Sbjct: 14548 ttgaagtgcaggttcagcct 14529

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>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 128    gtagaggaagaggcagtctt 147
              ||||||||||||||||||||
Sbjct: 113781 gtagaggaagaggcagtctt 113762

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>gb|AC040174.5| Homo sapiens chromosome 16 clone RP11-96H17, complete sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 417   atcggattcaatgtctcagt 436
             ||||||||||||||||||||
Sbjct: 53922 atcggattcaatgtctcagt 53903

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>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence
          Length = 162931

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   gtagaggaagaggcagtctt 147
             ||||||||||||||||||||
Sbjct: 51716 gtagaggaagaggcagtctt 51697

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>emb|AJ000238.1|HVJ000238 Hordeum vulgare mRNA for expressed sequence tag
          Length = 300

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 372 tcatgcagggcatcttctactacaaaatcaaatgtctgattccatatcggattcaatgtc 431
           ||||||| | ||||||| || ||||| ||||| || |||||||| | ||| |||||  | 
Sbjct: 76  tcatgcaagccatcttcgacaacaaagtcaaaagtttgattccaaaccgggttcaagctt 17

                           
Query: 432 tcagtcacaacccttg 447
           ||| ||||||||||||
Sbjct: 16  tcattcacaacccttg 1

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>emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete
             sequence
          Length = 94152

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tacacggttacaacttacaa 87
             ||||||||||||||||||||
Sbjct: 33617 tacacggttacaacttacaa 33598

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>gb|AF148956.1|AF148956 Oryctolagus cuniculus lens-specific calpain Lp82 mRNA, complete cds
          Length = 2196

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 222  tgcaggttcagccttccaga 241
            ||||||||||||||||||||
Sbjct: 1813 tgcaggttcagccttccaga 1794


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,843,677
Number of Sequences: 3902068
Number of extensions: 5843677
Number of successful extensions: 113905
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113730
Number of HSP's gapped (non-prelim): 168
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result