ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2f05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 888 bits (448), Expect = 0.0 Identities = 495/516 (95%) Strand = Plus / Plus Query: 31 agatttctttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaa 90 |||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 79877 agatttctttactatatttagtacaattgttatatgacacatgcttttttttatggggaa 79936 Query: 91 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79937 actacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggc 79996 Query: 151 tttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgc 210 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 79997 tttagtaataaataaattcgctttgtcgaaatccctataatgagtagcatttgcggctgc 80056 Query: 211 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80057 cgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcat 80116 Query: 271 aacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaac 330 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 80117 aacagtttcctcgtagtaacgccagcgaatctcgtcaagaactctttgtgctttgaaaac 80176 Query: 331 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80177 agacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggt 80236 Query: 391 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80237 tggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatata 80296 Query: 451 ctttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttattt 510 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 80297 ctttactagtttgaaacttgtcataaataaggttattccccgcctacctttactttattt 80356 Query: 511 tgaatcnnnnnnnncttcttaatctttctattcaga 546 |||||| |||||||||||||||||||||| Sbjct: 80357 tgaatcttttttttcttcttaatctttctattcaga 80392 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 525 cttcttaatctttctattcaga 546 |||||||||||||||||||||| Sbjct: 134523 cttcttaatctttctattcaga 134502
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 387 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 328 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 327 ttattccccgcttacct 311
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 387 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 328 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 327 ttattccccgcttacct 311
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 80109 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80168 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 80169 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80228 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 80229 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80288 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80289 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80348 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 80349 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80408 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 80409 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80468 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 80469 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80528 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80529 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 80588 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 80589 ttattccccgcttacct 80605
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 80109 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80168 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 80169 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80228 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 80229 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80288 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80289 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80348 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 80349 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80408 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 80409 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80468 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 80469 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80528 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80529 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 80588 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 80589 ttattccccgcttacct 80605
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 80052 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80111 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 80112 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80171 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 80172 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80231 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80232 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80291 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 80292 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80351 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 80352 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80411 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 80412 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80471 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80472 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 80531 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 80532 ttattccccgcttacct 80548
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 80097 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80156 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 80157 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80216 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 80217 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80276 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80277 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80336 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 80337 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80396 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 80397 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80456 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 80457 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80516 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80517 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 80576 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 80577 ttattccccgcttacct 80593
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 70645 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 70586 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 70585 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 70526 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 70525 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 70466 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 70465 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 70406 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 70405 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 70346 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 70345 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 70286 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 70285 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 70226 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 70225 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 70166 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 70165 ttattccccgcttacct 70149
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 9212532 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9212591 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 9212592 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9212651 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 9212652 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9212711 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9212712 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9212771 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 9212772 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9212831 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 9212832 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9212891 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 9212892 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9212951 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9212952 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 9213011 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 9213012 ttattccccgcttacct 9213028 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 9189572 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9189513 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 9189512 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9189453 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 9189452 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9189393 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9189392 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9189333 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 9189332 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9189273 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 9189272 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9189213 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 9189212 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9189153 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9189152 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 9189093 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 9189092 ttattccccgcttacct 9189076 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 9112619 aaatcttagatggatctaaagattattttgatttctttactatatttagtacaattgtta 9112560 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 9112559 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9112500 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 9112499 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9112440 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9112439 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9112380 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 9112379 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9112320 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 9112319 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9112260 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 9112259 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9112200 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9112199 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 9112140 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 9112139 ttattccccgcttacct 9112123 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 213 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 272 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 11711485 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 11711426 Query: 273 cagtttcctcgtagtaacgccaccgaatctc 303 |||||| |||||||||||||| |||||||| Sbjct: 11711425 tagtttcttcgtagtaacgccaacgaatctc 11711395 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 174 tgtcgaaatccctataatgagttgcatttg 203 ||||||||||| |||||||||| ||||||| Sbjct: 18621596 tgtcgaaatccatataatgagtagcatttg 18621567
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 9256962 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 9256903 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 9256902 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 9256843 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 9256842 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 9256783 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9256782 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 9256723 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 9256722 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 9256663 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 9256662 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 9256603 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 9256602 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 9256543 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 9256542 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 9256483 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 9256482 ttattccccgcttacct 9256466
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 68175 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 68116 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 68115 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 68056 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 68055 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 67996 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 67995 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 67936 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 67935 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 67876 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 67875 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 67816 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 67815 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 67756 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 67755 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 67696 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 67695 ttattccccgcttacct 67679
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 676 bits (341), Expect = 0.0 Identities = 456/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 80049 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 80108 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 80109 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 80168 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 80169 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 80228 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80229 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 80288 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 80289 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 80348 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 80349 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 80408 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 80409 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 80468 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 80469 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 80528 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 80529 ttattccccgcttacct 80545
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 714 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 655 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 654 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 595 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 594 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 535 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 534 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 475 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 474 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 415 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 414 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 355 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 354 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 295 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 294 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 235 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 234 ttattccccgcttacct 218
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 14453591 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 14453532 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 14453531 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 14453472 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 14453471 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 14453412 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 14453411 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 14453352 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 14453351 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 14453292 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 14453291 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 14453232 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 14453231 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 14453172 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 14453171 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 14453112 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 14453111 ttattccccgcttacct 14453095 Score = 539 bits (272), Expect = e-150 Identities = 376/410 (91%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 11893711 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 11893655 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 11893654 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 11893595 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 11893594 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 11893535 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 11893534 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 11893475 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 11893474 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 11893415 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||| Sbjct: 11893414 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 11893355 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacct 499 ||||||| |||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 11893354 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 11893305 Score = 125 bits (63), Expect = 2e-25 Identities = 69/71 (97%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 11893799 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 11893740 Query: 63 tatgacacatg 73 ||||||||||| Sbjct: 11893739 tatgacacatg 11893729
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 27925582 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 27925641 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 27925642 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 27925701 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 27925702 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 27925761 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 27925762 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 27925821 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 27925822 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 27925881 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 27925882 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 27925941 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 27925942 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 27926001 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 27926002 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 27926061 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 27926062 ttattccccgcttacct 27926078 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 158 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 217 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 10159884 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 10159825 Query: 218 accaact 224 ||||||| Sbjct: 10159824 accaact 10159818 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 251 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 310 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 10159803 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 10159750 Query: 311 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 363 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 10159749 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 10159698
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 88940 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 88999 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 89000 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 89059 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 89060 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 89119 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 89120 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 89179 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 89180 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 89239 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 89240 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 89299 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 89300 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 89359 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 89360 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 89419 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 89420 ttattccccgcttacct 89436
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 14916 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 14975 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 14976 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 15035 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 15036 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 15095 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 15096 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagataggataagatg 15155 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 15156 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 15215 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 15216 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 15275 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 15276 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 15335 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 15336 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 15395 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 15396 ttattccccgcttacct 15412
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 145394 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 145335 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 145334 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 145275 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 145274 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 145215 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 145214 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 145155 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 145154 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 145095 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 145094 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 145035 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 145034 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 144975 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 144974 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 144915 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 144914 ttattccccgcttacct 144898
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 53156 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 53097 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 53096 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 53037 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 53036 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 52977 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52976 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 52917 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 52916 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 52857 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 52856 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 52797 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 52796 cccgttcgaacttaagtagacgatcagttggtacttttcttgcgagtttccttagcccac 52737 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 52736 tcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 52677 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 52676 ttattccccgcttacct 52660
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 668 bits (337), Expect = 0.0 Identities = 455/497 (91%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 807 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 748 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 747 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 688 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 687 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 628 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 568 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 567 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 508 Query: 303 cgtcaagaactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaa 362 | || |||||||||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 507 catccagaactctttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaaa 448 Query: 363 ctctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagcccac 422 | | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 447 cccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagcccac 388 Query: 423 ttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataagt 482 | ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 387 tcttcttcttccttatcctaggggtatactttaccagtttgaaacttgtcataaataagg 328 Query: 483 ttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 327 ttattccccgcttacct 311
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 78290 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 78349 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 78350 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 78409 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 78410 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 78469 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 78470 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 78529 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 78530 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 78589 Query: 303 cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 361 | || ||||||| ||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 78590 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 78649 Query: 362 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 421 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 78650 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 78709 Query: 422 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 78710 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 78769 Query: 482 tttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 78770 gttattccccgcttacct 78787
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 12354 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 12413 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 12414 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 12473 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 12474 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 12533 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12534 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 12593 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 12594 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 12653 Query: 303 cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 361 | || ||||||| ||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 12654 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 12713 Query: 362 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 421 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 12714 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 12773 Query: 422 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 12774 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 12833 Query: 482 tttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 12834 gttattccccgcttacct 12851
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 10371898 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 10371957 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 10371958 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 10372017 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 10372018 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 10372077 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10372078 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 10372137 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 10372138 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 10372197 Query: 303 cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 361 | || ||||||| ||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 10372198 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 10372257 Query: 362 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 421 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 10372258 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 10372317 Query: 422 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 10372318 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 10372377 Query: 482 tttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 10372378 gttattccccgcttacct 10372395
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 662 bits (334), Expect = 0.0 Identities = 456/498 (91%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 10377937 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 10377996 Query: 63 tatgacacatgcnnnnnnnnatagggaaactacgtcctcgagctcgaggtctgaatttct 122 ||||||||||| || || |||||||||||||||| |||||||||||||| | Sbjct: 10377997 tatgacacatggttttttttatgggagaactacgtcctcgagcccgaggtctgaatttat 10378056 Query: 123 tcataatagtactcctactgacttcggctttagtaatgaataaattcgctttgtcgaaat 182 |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 10378057 tcataatagtactcctactgacttcggctttagtgatgaataaatttgctttgtcgaaat 10378116 Query: 183 ccctataatgagttgcatttgcggctgccgaataaaccaactttaagatgggataagatg 242 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10378117 ccctataatgagtagcatttgctgctgccgaataaaccaactttaagatgggataagatg 10378176 Query: 243 ctcgatagggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| Sbjct: 10378177 ctcgataaggcatgaggttcaatatcataacagtttcttcgtagtaacgccaacgaatct 10378236 Query: 303 cgtcaagaactc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaa 361 | || ||||||| ||||| |||||||||| ||||| |||| |||||||||||||||||| Sbjct: 10378237 catccagaactcttttgtactttgaaaacggacatgtggatgcgtttttgtgctttgaaa 10378296 Query: 362 actctctcgaacttaagtagacgatcggttggaactttccttgcgagtttccttagccca 421 || | |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 10378297 acccgttcgaacttaagtagacgatcggttggtacttttcttgcgagtttccttagccca 10378356 Query: 422 cttttcttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 || ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 10378357 ctcttcttcttctttatcctaggggtatactttaccagtttgaaacttgtcataaataag 10378416 Query: 482 tttattccccgcctacct 499 ||||||||||| ||||| Sbjct: 10378417 gttattccccgcttacct 10378434
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 585 bits (295), Expect = e-164 Identities = 390/421 (92%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81914 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 81973 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 81974 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82033 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82034 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82093 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82094 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82153 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82154 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82213 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82214 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82270 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 509 ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 82271 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82330 Query: 510 t 510 | Sbjct: 82331 t 82331 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 cgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgt 60 ||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 81825 cgaaatcttagattgatctaaagattattttgatttctttactatatttagtacaattgt 81884 Query: 61 tatatgacacat 72 ||||| |||||| Sbjct: 81885 tatattacacat 81896
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 585 bits (295), Expect = e-164 Identities = 390/421 (92%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 81944 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82003 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| |||| Sbjct: 82004 ctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgctg 82063 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82064 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82123 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82124 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82183 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82184 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82243 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82244 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82300 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 509 ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 82301 actttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttatt 82360 Query: 510 t 510 | Sbjct: 82361 t 82361 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 cgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgt 60 ||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 81855 cgaaatcttagattgatctaaagattattttgatttctttactatatttagtacaattgt 81914 Query: 61 tatatgacacat 72 ||||| |||||| Sbjct: 81915 tatattacacat 81926
>emb|Y00329.1|CHZMRP22 Maize chloroplast rpl22 gene for ribosomal protein L22 Length = 607 Score = 571 bits (288), Expect = e-160 Identities = 390/422 (92%), Gaps = 4/422 (0%) Strand = Plus / Minus Query: 90 aactacgtcctcgagctcgaggtctgaatttctt-cataatagtactcctactgacttcg 148 ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 481 aactacgtcctcgagctcgaggtctgaatttttttcataatagtactcctactgacttcg 422 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| ||| Sbjct: 421 gctttagtgatgaataaattcgttttgtcgaaatccctataatgagtagcatttgctgct 362 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct: 361 gccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatc 302 Query: 269 ataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaa 328 ||||| |||||||||||||||||||| |||||||| || ||||||||||||||||||||| Sbjct: 301 ataacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaa 242 Query: 329 acagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcg 388 ||||||||| | || |||||||||||||||||||| | ||||| ||||||||||||||| Sbjct: 241 acagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcg 182 Query: 389 gttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggata 448 ||||||||||| ||||||||||| || ||||| ||||||||||||||||||||| || Sbjct: 181 gttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggta 125 Query: 449 tactttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttat 508 |||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 124 tactttaccaatttgaaacttgtcataaataaggttattacccgcctacctttactttat 65 Query: 509 tt 510 || Sbjct: 64 tt 63 Score = 95.6 bits (48), Expect = 1e-16 Identities = 66/72 (91%) Strand = Plus / Minus Query: 1 cgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgt 60 ||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 570 cgaaatcttagattgatctaaagaccattttgatttctttactatatttagtacaattgt 511 Query: 61 tatatgacacat 72 ||||| |||||| Sbjct: 510 tatattacacat 499
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 561 bits (283), Expect = e-157 Identities = 387/421 (91%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3053 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 3112 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 3113 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 3172 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 3173 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 3232 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 3233 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 3292 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 3293 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 3352 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 3353 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 3409 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 509 ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 3410 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 3469 Query: 510 t 510 | Sbjct: 3470 t 3470 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 cgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgt 60 |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2964 cgaaattttagattgatctaaagattatttagatttctttactatatttagtacaattgt 3023 Query: 61 tatatgacacat 72 ||||| |||||| Sbjct: 3024 tatattacacat 3035
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 561 bits (283), Expect = e-157 Identities = 387/421 (91%), Gaps = 3/421 (0%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 82610 aactacgtcctcgagctcgaggtctgaattttttcataatagtactcctactgacttcgg 82669 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||| | |||||||||||||||||||||||| |||||||| |||| Sbjct: 82670 ctttagtgatgaataaatttgttttgtcgaaatccctataatgagtagcatttgctgctg 82729 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 82730 ccgaataaaccaactttaagatgggatacgatgctcgataaggcatgagattcagtatca 82789 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||| |||||||||||||||||||| |||||||| || |||||||||||||||||||||| Sbjct: 82790 taacggtttcctcgtagtaacgccagcgaatctcatctagaactctttgtgctttgaaaa 82849 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 |||||||| | || |||||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 82850 cagacatatgtatgcgtttttgtgctttgaaaacccgttcgaatttaagtagacgatcgg 82909 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||||||||| ||||||||||| || ||||| ||||||||||||||||||||| ||| Sbjct: 82910 ttggaacttttcttgcgagttttctcagccc---cttcttcttctttatcctaggggtat 82966 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacctttactttatt 509 ||||||| | |||||||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct: 82967 actttaccaatttgaaacttgtcataaataaggttattacccgcctatctttattttatt 83026 Query: 510 t 510 | Sbjct: 83027 t 83027 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Plus Query: 1 cgaaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgt 60 |||||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 82521 cgaaattttagattgatctaaagattatttagatttctttactatatttagtacaattgt 82580 Query: 61 tatatgacacat 72 ||||| |||||| Sbjct: 82581 tatattacacat 82592
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 539 bits (272), Expect = e-150 Identities = 376/410 (91%), Gaps = 3/410 (0%) Strand = Plus / Minus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||| Sbjct: 75201 aactacgtcctcgagcccgaggtctgaatttattcataatagtact---actgacttcgg 75145 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 75144 ctttagtgatgaataaatttgctttgtcgaaatccctataatgagtagcatttgctgcta 75085 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 75084 ccgaataaaccaactttaagatgggataagatgctcgataaggcatgaggttcaatatca 75025 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 |||||||||| |||||||||||||| |||||||| || |||||||||||| ||||||||| Sbjct: 75024 taacagtttcttcgtagtaacgccaacgaatctcatccagaactctttgtactttgaaaa 74965 Query: 330 cagacatagggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcgg 389 | ||||| |||| |||||||||||||||||||| | ||||||||||||||| |||||| Sbjct: 74964 cggacatgtggatgcgtttttgtgctttgaaaacccgttcgaacttaagtagatgatcgg 74905 Query: 390 ttggaactttccttgcgagtttccttagcccacttttcttcttctttatcctagggatat 449 |||| ||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||| Sbjct: 74904 ttggtacttttcttgcgagtttccttagcccactcttcttcttctttatcccaggggtat 74845 Query: 450 actttactagtttgaaacttgtcataaataagtttattccccgcctacct 499 ||||||| |||||||||||||| ||||||||| ||||||||||| ||||| Sbjct: 74844 actttaccagtttgaaacttgttataaataaggttattccccgcttacct 74795 Score = 125 bits (63), Expect = 2e-25 Identities = 69/71 (97%) Strand = Plus / Minus Query: 3 aaatcttagatggatctaaaggttatttagatttctttactatatttagtacaattgtta 62 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 75289 aaatcttagatggatctaaagattatttcgatttctttactatatttagtacaattgtta 75230 Query: 63 tatgacacatg 73 ||||||||||| Sbjct: 75229 tatgacacatg 75219
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Minus Query: 39 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 98 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 18328526 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18328467 Query: 99 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 158 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 18328466 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18328407 Query: 159 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 218 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 18328406 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18328347 Query: 219 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 278 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 18328346 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18328287 Query: 279 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 338 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 18328286 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18328227 Query: 339 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 396 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 18328226 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18328169 Query: 397 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 456 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 18328168 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18328109 Query: 457 tagtttgaaacttgtcataaataagtttattccccgcctacct 499 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 18328108 cagtttgaaacttgtcataaataagattattccccgcttacct 18328066
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Minus Query: 39 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 98 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 18254847 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 18254788 Query: 99 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 158 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 18254787 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 18254728 Query: 159 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 218 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 18254727 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 18254668 Query: 219 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 278 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 18254667 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 18254608 Query: 279 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 338 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 18254607 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 18254548 Query: 339 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 396 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 18254547 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 18254490 Query: 397 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 456 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 18254489 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 18254430 Query: 457 tagtttgaaacttgtcataaataagtttattccccgcctacct 499 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 18254429 cagtttgaaacttgtcataaataagattattccccgcttacct 18254387
>emb|AL831799.3|CNS08CAC Oryza sativa chromosome 12, . BAC OSJNBa0087A02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 177034 Score = 462 bits (233), Expect = e-127 Identities = 405/463 (87%), Gaps = 4/463 (0%) Strand = Plus / Plus Query: 39 ttactatatttagtacaattgttatatgacacatgcnnnnnnnnatagggaaactacgtc 98 ||||||||||||||| ||||||||||||||||||| || || ||||||||| Sbjct: 42468 ttactatatttagtagaattgttatatgacacatggttttatttatgggagaactacgtc 42527 Query: 99 ctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagtaa 158 ||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||| | Sbjct: 42528 ctcgagcctgaggtctgaatttattcataatagtactcctattgacttcggctttagtga 42587 Query: 159 tgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaa 218 |||| ||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 42588 tgaacaaatttgctttgtcgaaatccttataatgagtagcatttgctgctgccgaataaa 42647 Query: 219 ccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagttt 278 ||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||| Sbjct: 42648 ccaactttaagatgggataagatgctcgataaggcatgaggtttaatatcataacagttt 42707 Query: 279 cctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaacagacatag 338 | |||||||||| ||| | |||||| || | |||||||||| |||||||||| ||||| Sbjct: 42708 cttcgtagtaacaccaacaaatctcatccataactctttgtactttgaaaacggacatgt 42767 Query: 339 ggatacgtttttgtgctttgaaaactctctcgaacttaagtagacgatcggttgg--aac 396 |||| ||||| |||||||||||| | |||| |||||||||||||||||||||| || Sbjct: 42768 ggatgtgttttcgtgctttgaaaa--ccctcgtacttaagtagacgatcggttggtatac 42825 Query: 397 tttccttgcgagtttccttagcccacttttcttcttctttatcctagggatatactttac 456 ||| ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||| Sbjct: 42826 ttttcttctgagtttctttggcccactcttcttcttctttatcctaggggtatactttaa 42885 Query: 457 tagtttgaaacttgtcataaataagtttattccccgcctacct 499 |||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 42886 cagtttgaaacttgtcataaataagattattccccgcttacct 42928
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 182 bits (92), Expect = 8e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 168 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 227 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 212531 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 212590 Query: 228 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 287 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 212591 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 212650 Query: 288 aacgccac 295 || ||||| Sbjct: 212651 aaggccac 212658
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 182 bits (92), Expect = 8e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 168 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 227 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 553553 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 553612 Query: 228 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 287 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 553613 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 553672 Query: 288 aacgccac 295 || ||||| Sbjct: 553673 aaggccac 553680
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 182 bits (92), Expect = 8e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 168 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 227 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 456830 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 456889 Query: 228 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 287 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 456890 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 456949 Query: 288 aacgccac 295 || ||||| Sbjct: 456950 aaggccac 456957
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 182 bits (92), Expect = 8e-43 Identities = 119/128 (92%) Strand = Plus / Plus Query: 168 tcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataaaccaacttta 227 |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct: 230065 tcgctttgtcgaaatccctataatgaatagcatttgctgctgccgaataaaccaacttta 230124 Query: 228 agatgggataagatgctcgatagggcatgaggttcagtatcataacagtttcctcgtagt 287 |||||||||||||||||| ||| ||||||||| ||||||||||||| |||||||| |||| Sbjct: 230125 agatgggataagatgctcaataaggcatgagggtcagtatcataacggtttcctcctagt 230184 Query: 288 aacgccac 295 || ||||| Sbjct: 230185 aaggccac 230192
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 141 bits (71), Expect = 3e-30 Identities = 86/91 (94%) Strand = Plus / Minus Query: 213 aataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataa 272 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 34272 aataaaccaactttaagatgggataagatgctcgatatggcatgaggttcaatatcataa 34213 Query: 273 cagtttcctcgtagtaacgccaccgaatctc 303 |||||| |||||||||||||| |||||||| Sbjct: 34212 tagtttcttcgtagtaacgccaacgaatctc 34182
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 133 bits (67), Expect = 7e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | | |||| || | |||||||| Sbjct: 86299 aaactacgtcctcgagctcgaggtttcaatttcttcacagtcgtacccccattgacttcg 86358 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| |||| | | || || ||| || | | |||||||| ||| Sbjct: 86359 gctttactaatgactaaattggcttcgctggaacccatattataactagcatttgctgct 86418 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86419 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86478 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 86479 ataagcgtttcctcataggaacg 86501
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86052 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86111 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86112 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86171 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86172 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86231 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 86232 ataagcgtttcctcataggaacg 86254
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85177 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85236 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85237 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85296 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85297 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85356 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 85357 ataagcgtttcctcataggaacg 85379
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 86050 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 86109 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 86110 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 86169 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||| ||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 86170 gcagaataaatcaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 86229 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 86230 ataagcgtttcctcataggaacg 86252
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | | |||||||| Sbjct: 85821 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtacctccattgacttcg 85880 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| |||| | | || || ||| | | | |||||||| ||| Sbjct: 85881 gctttactaatgactaaattggcttcgctggaacccatattgtaactagcatttgctgct 85940 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| |||| |||||||||||||| | |||||| Sbjct: 85941 gcagaataaaccaatttcaaaatgggataacatgcccgatagggcatgagttctagtatc 86000 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 86001 ataagcgtttcctcataggaacg 86023
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 117 bits (59), Expect = 4e-23 Identities = 167/203 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85189 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85248 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| | || || | || || ||| | | | |||||||| ||| Sbjct: 85249 gctttactaatgactaaattggtttcgttggaacccatattgtaactagcatttgctgct 85308 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85309 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85368 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 85369 ataagcgtttcctcataggaacg 85391
>gb|AY727185.1| Pseudotrillium rivale psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1015 Score = 111 bits (56), Expect = 2e-21 Identities = 200/248 (80%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 202 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 261 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||| |||| ||||||||| ||| | || || | |||||| ||||||| |||| Sbjct: 262 ctttactaataaataaattcacttccttcaagcccaggttatgagtagcatttgatgctg 321 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 322 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 381 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 382 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 441 Query: 330 cagacata 337 |||||||| Sbjct: 442 cagacata 449
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85341 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85400 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85401 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85460 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85461 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85520 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 85521 ataagcgtttcctcataggaacg 85543
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85338 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85397 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85398 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85457 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85458 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85517 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 85518 ataagcgtttcctcataggaacg 85540
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 109 bits (55), Expect = 1e-20 Identities = 166/203 (81%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| | |||||| | |||||||| Sbjct: 85224 aaactacgtcctcgagctcgaggtttcaatttcttcacagtagtaccttcattgacttcg 85283 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||||| |||||| | || | | || || ||| | | | |||||||| ||| Sbjct: 85284 gctttactaatgactaaattggtttcgctggaacccatattgtaactagcatttgctgct 85343 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| ||||||||||||||||||| | |||||| Sbjct: 85344 gcagaataaaccaatttcaaaatgggataacatgctcgatagggcatgagttctagtatc 85403 Query: 269 ataacagtttcctcgtagtaacg 291 |||| |||||||| ||| |||| Sbjct: 85404 ataagcgtttcctcataggaacg 85426
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 103 bits (52), Expect = 6e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||||||||||||||||||| | |||||||||| ||||||| | |||||||| Sbjct: 85507 aaactacgtcctcgagctcgaggttttaatttcttcacgatagtaccctcgctgacttca 85566 Query: 149 gctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggct 208 |||||| |||| | |||||| | || || | ||||| ||| | | | |||||||| ||| Sbjct: 85567 gctttactaataactaaatttgattcgttggaatccatattgtaactagcatttgctgct 85626 Query: 209 gccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatc 268 || ||||||||||| || || ||||||||| |||||||||| |||||||| | |||||| Sbjct: 85627 gcagaataaaccaatttaaaaatgggataacatgctcgataaggcatgagttctagtatc 85686 Query: 269 ataa 272 |||| Sbjct: 85687 ataa 85690
>gb|DQ006171.1| Commelina communis voucher Wells 4872 US psbA-trnH intergenic spacer and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 770 Score = 99.6 bits (50), Expect = 9e-18 Identities = 118/141 (83%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||| | ||||||||| ||||| |||| ||||||||||||||| ||||| Sbjct: 57 gcatttgctgctgcnggataaaccaattttaaaatggtataagatgctcgataaggcata 116 Query: 257 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctt 316 || | ||||||||||| |||||||| || |||| | ||||| | |||| |||||| Sbjct: 117 agttccagtatcataagtgtttcctcatacgaacggccgcgaatttgatcaattactctt 176 Query: 317 tgtgctttgaaaacagacata 337 ||||||||||||||||||||| Sbjct: 177 tgtgctttgaaaacagacata 197
>gb|AY727187.1| Trillium ovatum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1029 Score = 95.6 bits (48), Expect = 1e-16 Identities = 198/248 (79%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 219 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 278 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 279 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 338 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | ||||||||||| || || |||||||||||||| ||||| |||||||| | |||||||| Sbjct: 339 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagttccagtatca 398 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 399 taagtgtgtccgcataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 458 Query: 330 cagacata 337 |||||||| Sbjct: 459 cagacata 466
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 6e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 310 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 369 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343351 Query: 370 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 420 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 4343350 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343300
>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G08, from Chromosome 3, complete sequence Length = 122052 Score = 93.7 bits (47), Expect = 6e-16 Identities = 95/111 (85%) Strand = Plus / Plus Query: 310 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 369 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 83087 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 83146 Query: 370 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 420 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 83147 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 83197
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 6e-16 Identities = 95/111 (85%) Strand = Plus / Minus Query: 310 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 369 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 4343525 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcattgaaaacctgttt 4343466 Query: 370 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 420 |||||||| |||| |||||||||| ||| | ||||| |||||||||||||| Sbjct: 4343465 gaacttaattagatgatcggttggtactgttcttgcaagtttccttagccc 4343415
>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22 Length = 127365 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 158 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 217 ||||||||||| |||||||||||||||||||||||||| | |||||| | |||||||||| Sbjct: 18621 atgaataaatttgctttgtcgaaatccctataatgagtagtatttgctgttgccgaataa 18562 Query: 218 accaact 224 ||||||| Sbjct: 18561 accaact 18555 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/114 (84%), Gaps = 9/114 (7%) Strand = Plus / Minus Query: 251 ggcatgaggttcagtatcataacagtttcctcgtagtaacgccaccgaatctcgtcaaga 310 |||||||||||||||||||||| ||||| |||||||||||| ||||| | |||| Sbjct: 18540 ggcatgaggttcagtatcataatggtttcttcgtagtaacgc------atctcatgaaga 18487 Query: 311 actc-tttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaac 363 |||| ||||| |||||||||| ||||| |||| ||||||||||||||||||| Sbjct: 18486 actcttttgtactttgaaaacggacat--ggatgtgtttttgtgctttgaaaac 18435
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 91.7 bits (46), Expect = 2e-15 Identities = 157/194 (80%) Strand = Plus / Plus Query: 98 cctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcggctttagta 157 ||||||||||||||| | ||||| |||||| |||||| | ||||||| |||||| || Sbjct: 88364 cctcgagctcgaggttttaattttttcatagtagtaccctcgttgacttcagctttacta 88423 Query: 158 atgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctgccgaataa 217 || | |||| | |||| | |||| || ||| |||| | |||||||| ||||| |||||| Sbjct: 88424 ataactaaacttgcttcattgaaacccatattatgactagcatttgctgctgcagaataa 88483 Query: 218 accaactttaagatgggataagatgctcgatagggcatgaggttcagtatcataacagtt 277 |||||||| || ||||||||| | |||||||| ||||| || | |||||||||| ||| Sbjct: 88484 accaacttaaaaatgggataacacgctcgataaggcataagttcgagtatcataagtgtt 88543 Query: 278 tcctcgtagtaacg 291 ||||||||| |||| Sbjct: 88544 tcctcgtaggaacg 88557
>gb|AY727186.1| Trillium texanum psbA-trnH intergenic spacer, partial sequence; chloroplast Length = 1060 Score = 87.7 bits (44), Expect = 4e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 228 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 287 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||| | |||| ||||||||| ||| | || || | |||||| || |||| |||| Sbjct: 288 cttgactaataaataaattcacttccttcaagcccaggttatgagtagcgtttgatgctg 347 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | ||||||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 348 cagaataaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 407 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 408 taagtgtgtccacataggaacgcccgcgaatctgatcaattactcttcgtgctttgaaaa 467 Query: 330 cagacata 337 |||||||| Sbjct: 468 cagacata 475
>gb|DQ006202.1| Trillium sessile voucher Wells 4879 US PsbA (psbA) gene, partial cds; psbA-trnH intergenic spacer, complete sequence; and tRNA-His (trnH) gene, partial sequence; chloroplast Length = 1172 Score = 87.7 bits (44), Expect = 4e-14 Identities = 197/248 (79%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||| ||||||||||||| |||||| || || |||| ||||| || || | ||||||| | Sbjct: 283 aactccgtcctcgagctctaggtcttaactttttcacaatagcacccccattgacttcag 342 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||| | |||| ||||||||| |||| | || || | |||||| || |||| |||| Sbjct: 343 cttgactaataaataaattcactttcttcaagcccaggttatgagtagcgtttgatgctg 402 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | ||| ||||||| || || |||||||||||||| ||||| |||||||| |||||||| Sbjct: 403 cagaagaaaccaatttcaaaatgggataagatgcccgataaggcatgagtgccagtatca 462 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 ||| || ||| | ||| |||||| ||||||| |||| |||||| |||||||||||| Sbjct: 463 taagtgtgtccgcataggaacgcccgcgaatctgatcaatgactcttcgtgctttgaaaa 522 Query: 330 cagacata 337 |||||||| Sbjct: 523 cagacata 530
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 85.7 bits (43), Expect = 1e-13 Identities = 82/95 (86%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| |||||| Sbjct: 88237 gcatttgctgctgcagaataaaccaattttaaaatgggataacatgctcgataaggcatg 88296 Query: 257 aggttcagtatcataacagtttcctcgtagtaacg 291 || | |||||||||| ||||| |||||| |||| Sbjct: 88297 agttctagtatcataagtgtttcttcgtaggaacg 88331
>emb|AJ315790.1|OSA315790 Oryza sativa partial BP-73 gene for SAP-like protein Length = 5896 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 310 aactctttgtgctttgaaaacagacatagggatacgtttttgtgctttgaaaactctctc 369 |||||||||| ||||||||||||||||| |||| |||||||||| |||||||| | Sbjct: 3410 aactctttgtactttgaaaacagacatatggatgtgtttttgtgcgttgaaaacctgttt 3469 Query: 370 gaacttaagtagacgatcggttggaactttccttgcgagtttccttagccc 420 |||||||| |||| |||||| ||| ||| | ||||| |||||||||||||| Sbjct: 3470 gaacttaattagatgatcggctggtactgttcttgcaagtttccttagccc 3520
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 81.8 bits (41), Expect = 2e-12 Identities = 197/249 (79%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 ||||||||||| ||| |||||| | || || |||| ||||||| || | ||||||||| Sbjct: 84744 aactacgtcctttagcccgaggtttaaactttttcacgatagtacccccattgacttcgg 84803 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||| |||||||| ||| |||| || ||| | ||| ||| | |||||||| |||| Sbjct: 84804 ctttactaatgaatgaatcagcttcgttaaaactcttattgtgactagcatttgctgctg 84863 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | |||||||||| || || |||||||||||||||||||| |||||||| | ||||| || Sbjct: 84864 cagaataaaccagtttaaaaatgggataagatgctcgataaggcatgagttccagtagca 84923 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 ||| |||||| | ||| |||| | ||||||| |||| |||||| |||||||| | Sbjct: 84924 taagtgtttccgcataggaacgtccacgaatctgatcaacgactcttcgtgctttgtgag 84983 Query: 330 cagacatag 338 ||||||||| Sbjct: 84984 cagacatag 84992
>gb|M22826.1|RICCPRPL Oryza sativa chloroplast ribosomal protein (rpL23, rpL2 and rpS190) genes, complete cds, ribosomal protein L22 (rpL22) gene, 5' end, transfer RNA-Ile and -His genes Length = 2789 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 439 cctagggatatactttactagtttgaaacttgtcataaataagtttattccccgcctacc 498 ||||||| |||||||||| | |||||||||||||||||||||| ||||||||||| |||| Sbjct: 2789 cctaggggtatactttaccaatttgaaacttgtcataaataaggttattccccgcttacc 2730 Query: 499 t 499 | Sbjct: 2729 t 2729
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86083 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86142 Query: 257 aggttcagtatcataacagtttcctcgtagtaacg 291 || | |||||||| | ||||| |||||| |||| Sbjct: 86143 agttcgagtatcatcattgtttcttcgtaggaacg 86177
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 77.8 bits (39), Expect = 3e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||||||||||||||| ||||| || |||||| |||||||||| |||||| Sbjct: 86312 gcatttgctgctgccgaataaaccaattttaaaattggataacatgctcgataaggcatg 86371 Query: 257 aggttcagtatcataacagtttcctcgtagtaacg 291 || | |||||||| | ||||| |||||| |||| Sbjct: 86372 agttcgagtatcatcattgtttcttcgtaggaacg 86406
>emb|Y00141.1|CHZMRP19 Maize chloroplast rps19 gene for ribosomal protein S19 Length = 411 Score = 73.8 bits (37), Expect = 5e-10 Identities = 43/45 (95%) Strand = Plus / Minus Query: 466 acttgtcataaataagtttattccccgcctacctttactttattt 510 |||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 411 acttgtcataaataaggttattacccgcctacctttactttattt 367
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 71.9 bits (36), Expect = 2e-09 Identities = 108/132 (81%) Strand = Plus / Plus Query: 141 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 200 |||||||||||||| |||| ||||||| |||| | ||| |||||| ||| | |||| Sbjct: 89310 tgacttcggctttactaataaataaatcagcttctttcaaacccctattgtgactagcat 89369 Query: 201 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggt 260 |||| ||||| |||||||| || || || ||||| ||| |||||||||| |||||||| | Sbjct: 89370 ttgctgctgcggaataaactaatttgaaaatggggtaacatgctcgataaggcatgagtt 89429 Query: 261 tcagtatcataa 272 ||||||||||| Sbjct: 89430 ccagtatcataa 89441
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcgg 149 |||||||||||||||| || ||| | || || ||||||||||| | ||| ||||||| | Sbjct: 85691 aactacgtcctcgagcccggggttttaactttttcataatagtgcctctattgacttcag 85750 Query: 150 ctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcatttgcggctg 209 ||||| |||| ||||| | ||| | ||| || ||| |||| | |||||||| |||| Sbjct: 85751 ctttactaataaataagtcaacttcattcaaacccatattatgactagcatttgctgctg 85810 Query: 210 ccgaataaaccaactttaagatgggataagatgctcgatagggcatgaggttcagtatca 269 | |||||||| || |||||||| ||||||||||| | ||| ||||| || | ||||||| Sbjct: 85811 cagaataaactaattttaagattggataagatgccctataaggcattagttctagtatca 85870 Query: 270 taacagtttcctcgtagtaacgccaccgaatctcgtcaagaactctttgtgctttgaaaa 329 | | | |||||| || |||| | ||||||| |||| |||||| |||||||||||| Sbjct: 85871 tgagtgcttcctcataagaacgtccacgaatctgatcaattactcttcgtgctttgaaaa 85930 Query: 330 cagacata 337 |||||||| Sbjct: 85931 cagacata 85938
>gb|AY962222.1| Hevea brasiliensis clone hmct52 microsatellite sequence Length = 813 Score = 67.9 bits (34), Expect = 3e-08 Identities = 97/118 (82%) Strand = Plus / Minus Query: 141 tgacttcggctttagtaatgaataaattcgctttgtcgaaatccctataatgagttgcat 200 |||||||||||||| |||||| |||||| ||| || |||| || ||| ||| | |||| Sbjct: 124 tgacttcggctttactaatgattaaattgacttcgttgaaacccatattgtgactagcat 65 Query: 201 ttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatgag 258 |||| ||||| ||||||| ||| || || | ||||||| |||||||||| |||||||| Sbjct: 64 ttgctgctgcagaataaatcaatttaaaaaggggataacatgctcgataaggcatgag 7
>emb|X13336.1|CHSORP Spinacia oleracea plastid genes rps3, rps19, rpl14, rpl16 and rpl22 for ribosomal proteins S3, S19, L14, L16 and L22 Length = 4102 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||| ||||||| ||| || || ||||||||| ||||||||||||||||| Sbjct: 690 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 631 Query: 257 ag 258 || Sbjct: 630 ag 629
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||| ||||||| ||| || || ||||||||| ||||||||||||||||| Sbjct: 82252 gcatttgctgctgcagaataaatcaatttaaaaatgggataacatgctcgatagggcatg 82311 Query: 257 ag 258 || Sbjct: 82312 ag 82313
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 67.9 bits (34), Expect = 3e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 197 gcatttgcggctgccgaataaaccaactttaagatgggataagatgctcgatagggcatg 256 |||||||| ||||| || |||||||| ||||| || ||| ||||||||||||| ||||| Sbjct: 83378 gcatttgctgctgcagagtaaaccaattttaaaataggaaaagatgctcgataaggcatc 83437 Query: 257 aggttcagtatcataacagtttcctcgtagtaacgccaccgaatct 302 || | |||||||||| |||||||| ||| |||||| ||||||| Sbjct: 83438 agttctagtatcataattgtttcctcataggaacgcccacgaatct 83483
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 89 aaactacgtcctcgagctcgaggtctgaatttcttcataatagtactcctactgacttcg 148 |||||||| ||||||||||||||| | ||| ||||||| ||||||| || | |||||| Sbjct: 82982 aaactacgccctcgagctcgaggttttaatctcttcatgatagtacctttatttacttcg 83041 Query: 149 gctttagtaatgaataaattcgctt 173 |||||| |||| | |||||| |||| Sbjct: 83042 gctttactaatcactaaatttgctt 83066
>gb|AC097174.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1111_A10, complete sequence Length = 155106 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 171 ctttgtcgaaatccctataatgagttgcatttg 203 |||||| |||||||||||||||||| ||||||| Sbjct: 91188 ctttgttgaaatccctataatgagtagcatttg 91220
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 171 ctttgtcgaaatccctataatgagttgcatttg 203 |||||| |||||||||||||||||| ||||||| Sbjct: 5176685 ctttgttgaaatccctataatgagtagcatttg 5176717 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Minus Query: 428 ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 ||||| ||||||| |||| | ||| |||| ||||||||||||||| ||||||| Sbjct: 4877979 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 4877926
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Plus Query: 90 aactacgtcctcgagctcgaggtctgaatttcttca 125 ||||||||||||||||||||||| | ||||| |||| Sbjct: 88506 aactacgtcctcgagctcgaggtttcaattttttca 88541
>gb|AF389766.1| Uncultured bacterium clone NIW3-1 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtct 114 |||||||||||||||||||||| Sbjct: 192 tacgtcctcgagctcgaggtct 171
>gb|AY424708.1| Uncultured bacterium isolate DGGE band BDS17 NifH (nifH) gene, partial cds Length = 221 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtct 114 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>gb|AY424700.1| Uncultured bacterium isolate DGGE band BRS9 NifH (nifH) gene, partial cds Length = 231 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtct 114 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>gb|AY424699.1| Uncultured bacterium isolate DGGE band BDS8 NifH (nifH) gene, partial cds Length = 216 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtct 114 |||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtct 73
>emb|X13327.1|CHSCPSBA Secale cereale chloroplast psbA gene for herbicide-binding protein D1 Length = 2729 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 cttcttaatctttctattcaga 546 |||||||||||||||||||||| Sbjct: 2411 cttcttaatctttctattcaga 2432
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 44.1 bits (22), Expect = 0.47 Identities = 28/30 (93%) Strand = Plus / Minus Query: 174 tgtcgaaatccctataatgagttgcatttg 203 ||||||||||| |||||||||| ||||||| Sbjct: 89462 tgtcgaaatccatataatgagtagcatttg 89433
>emb|X07521.1|HVD1PSBA Hordeum vulgare chloroplast psbA gene for D1 protein of photosystem II Length = 1428 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 cttcttaatctttctattcaga 546 |||||||||||||||||||||| Sbjct: 1403 cttcttaatctttctattcaga 1424
>gb|M38374.1|BLYCPPSBAB Barley chloroplast herbicide-binding protein (psbA) gene, complete cds Length = 1430 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 cttcttaatctttctattcaga 546 |||||||||||||||||||||| Sbjct: 1405 cttcttaatctttctattcaga 1426
>emb|X07942.1|CHHVPSBA Barley chloroplast psbA gene Length = 2190 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 cttcttaatctttctattcaga 546 |||||||||||||||||||||| Sbjct: 2165 cttcttaatctttctattcaga 2186
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 44.1 bits (22), Expect = 0.47 Identities = 46/54 (85%) Strand = Plus / Minus Query: 428 ttcttctttatcctagggatatactttactagtttgaaacttgtcataaataag 481 ||||| ||||||| |||| | ||| |||| ||||||||||||||| ||||||| Sbjct: 150387 ttcttatttatccaaggggtttacggtactggtttgaaacttgtcacaaataag 150334
>gb|AY386787.1| Bradyrhizobium liaoningense strain Spr3-7 nitrogenase Fe protein (nifH) gene, partial cds Length = 356 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 198 tacgtcctcgagctcgaggtc 178
>gb|AE007235.1| Sinorhizobium meliloti 1021 plasmid pSymA section 41 of 121 of the complete plasmid sequence Length = 10370 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 8029 acgtcctcgagctcgaggtct 8009
>gb|DQ480974.1| Uncultured bacterium clone RT-CLY_20 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480958.1| Uncultured bacterium clone RT-075_39 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480915.1| Uncultured bacterium clone UT-CLY_37 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|DQ480883.1| Uncultured bacterium clone UT-600_30 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AF389770.1| Uncultured bacterium clone NIS16-4 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389775.1| Uncultured bacterium clone NIS15-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389778.1| Uncultured bacterium clone NIS14-4 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389779.1| Uncultured bacterium clone NIS14-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389783.1| Uncultured bacterium clone NIS13-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AF389790.1| Uncultured bacterium clone NIS11-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtct 171
>gb|AY424732.1| Uncultured bacterium isolate DGGE band BDS41 NifH (nifH) gene, partial cds Length = 234 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 93 acgtcctcgagctcgaggtct 73
>gb|AY424697.1| Uncultured bacterium isolate DGGE band BDS6 NifH (nifH) gene, partial cds Length = 249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 94 tacgtcctcgagctcgaggtc 74
>gb|AY221812.1| Xanthobacter flavus clone CC1080A1 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AY232321.1| Uncultured bacterium clone GN2018A1_RT dinitrogenase reductase (nifH) mRNA, partial cds Length = 324 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtct 75
>gb|AY159600.1| Uncultured Sinorhizobium sp. clone nifH102 NifH (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>gb|AY159587.1| Uncultured Sinorhizobium sp. clone nifH11 NifH (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>gb|AY360976.1| Uncultured bacterium cluster O NifH (nifH) gene, partial cds Length = 317 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 90 acgtcctcgagctcgaggtct 70
>gb|AY196404.1| Uncultured nitrogen-fixing bacterium clone g1-HW13 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtct 96
>ref|XM_804647.1| Trypanosoma cruzi strain CL Brener retrotransposon hot spot (RHS) protein (Tc00.1047053507555.80) partial mRNA Length = 2757 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 470 gtcataaataagtttattccccgcc 494 ||||| ||||||||||||||||||| Sbjct: 1221 gtcatgaataagtttattccccgcc 1197
>gb|AC119828.9| Mus musculus chromosome 10, clone RP23-186A24, complete sequence Length = 205915 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 agggatacgtttttgtgctttgaaa 361 |||||||||||||||||| |||||| Sbjct: 176607 agggatacgtttttgtgccttgaaa 176583
>emb|AJ716367.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-54B Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716364.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-44A Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716363.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERF-41B Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716347.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone SERE-22A Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>emb|AJ716276.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone GYMC-29B Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 114 tacgtcctcgagctcgaggtc 94
>emb|AJ716274.1| Uncultured bacterium partial nifH gene for dinitrogenase reductase, clone GYMC-22B Length = 357 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 114 tacgtcctcgagctcgaggtc 94
>gb|AF484656.1| Sinorhizobium sp. xhj12s nitrogenase iron protein-like protein (nifH) gene, partial sequence Length = 447 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 85 acgtcctcgagctcgaggtct 65
>gb|AF484635.1| Bradyrhizobium sp. 48b nitrogenase iron protein-like protein (nifH) gene, partial sequence Length = 447 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484634.1| Bradyrhizobium sp. 48a nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484633.1| Bradyrhizobium sp. 49b nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484632.1| Bradyrhizobium sp. 40a nitrogenase iron protein-like protien (nifH) gene, partial sequence Length = 450 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484631.1| Bradyrhizobium sp. 125e nitrogenase iron protein (nifH) gene, partial cds Length = 445 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484629.1| Bradyrhizobium sp. 108a1 nitrogenase iron protein (nifH) gene, partial cds Length = 445 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>gb|AF484628.1| Bradyrhizobium sp. 123b nitrogenase iron protein (nifH) gene, partial cds Length = 446 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tacgtcctcgagctcgaggtc 113 ||||||||||||||||||||| Sbjct: 85 tacgtcctcgagctcgaggtc 65
>dbj|AB217474.1| Sphingomonas azotifigens nifH gene for dinitrogenase reductase subunit, partial cds Length = 726 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 192 acgtcctcgagctcgaggtct 172
>dbj|AB182914.1| Pleomorphomonas oryzae nifH gene for Fe protein of nitrogenase-nifH, partial cds, strain:F-4 Length = 418 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 203 acgtcctcgagctcgaggtct 183
>gb|DQ413016.1| Sinorhizobium meliloti isolate RP254 NifH (nifH) gene, partial cds Length = 715 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 165 acgtcctcgagctcgaggtct 145
>gb|DQ426077.1| Uncultured bacterium clone 25.101 NifH-like (nifH) gene, partial sequence Length = 331 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtct 93
>gb|DQ425401.1| Uncultured bacterium clone 4.77 NifH-like (nifH) gene, partial sequence Length = 239 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 98 acgtcctcgagctcgaggtct 78
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 1704617 acgtcctcgagctcgaggtct 1704637
>dbj|AB208384.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR32 Length = 390 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 203 acgtcctcgagctcgaggtct 183
>gb|AF296349.1|AF296349 Xanthobacter autotrophicus clone p11xa dinitrogenase reductase (nifH) gene, partial cds Length = 403 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 177 acgtcctcgagctcgaggtct 157
>gb|AF296348.1|AF296348 Xanthobacter autotrophicus clone p10xa dinitrogenase reductase (nifH) gene, partial cds Length = 403 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 177 acgtcctcgagctcgaggtct 157
>gb|AY795615.1| Uncultured bacterium clone nifH.Pucci.S8 dinitrogenase reductase (nifH) gene, partial cds Length = 355 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AC091522.23| Mus musculus strain C57BL/6J chromosome 10 clone rp23-199g2, complete sequence Length = 214798 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 337 agggatacgtttttgtgctttgaaa 361 |||||||||||||||||| |||||| Sbjct: 27852 agggatacgtttttgtgccttgaaa 27828
>gb|AY724114.2| Uncultured bacterium clone DUNnif031 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724113.2| Uncultured bacterium clone DUNnif030 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724112.2| Uncultured bacterium clone DUNnif029 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724109.2| Uncultured bacterium clone DUNnif026 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724102.2| Uncultured bacterium clone DUNnif021 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY724101.2| Uncultured bacterium clone DUNnif020 (+1A) (OTU#032) dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY934877.1| Sinorhizobium sp. CCBAU 53044B nitrogenase reductase (nifH) gene, partial cds Length = 755 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 174 acgtcctcgagctcgaggtct 154
>gb|AY912768.1| Uncultured forest soil bacterium clone DUNnif377 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912583.1| Uncultured forest soil bacterium clone DUNnif192 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912577.1| Uncultured forest soil bacterium clone DUNnif186 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY912569.1| Uncultured forest soil bacterium clone DUNnif178 dinitrogenase reductase (nifH) gene, partial cds Length = 353 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 172 acgtcctcgagctcgaggtct 152
>gb|AY912555.1| Uncultured forest soil bacterium clone DUNnif164 dinitrogenase reductase (nifH) gene, partial cds Length = 352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtct 114 ||||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtct 151
>gb|AY829685.1| Uncultured bacterium clone TF25011 nitrogenase iron protein (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ224696.1| Uncultured bacterium clone nif1004424L92 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AY787583.1| Uncultured bacterium clone 52_Z65C nitrogenase iron protein (nifH) gene, partial cds Length = 359 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtc 94
>gb|DQ059362.1| Uncultured bacterium clone 1C-4 dinitrogenase reductase (nifH) gene, partial cds Length = 383 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 209 acgtcctcgagctcgaggtc 190
>gb|AC119244.12| Mus musculus chromosome 5, clone RP24-231P10, complete sequence Length = 210235 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 agcccacttttcttcttctt 435 |||||||||||||||||||| Sbjct: 12813 agcccacttttcttcttctt 12794
>gb|AC125025.7| Mus musculus chromosome 5, clone RP24-340K5, complete sequence Length = 175313 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 416 agcccacttttcttcttctt 435 |||||||||||||||||||| Sbjct: 158360 agcccacttttcttcttctt 158341
>gb|DQ481381.1| Uncultured microorganism clone 19390A6 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481379.1| Uncultured microorganism clone 19390A3 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481376.1| Uncultured microorganism clone 19390A15 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481374.1| Uncultured microorganism clone 19390A13 dinitrogenase reductase (nifH) gene, partial cds Length = 325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 96 acgtcctcgagctcgaggtc 77
>gb|DQ481034.1| Uncultured bacterium clone LT-CLY_21 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ480917.1| Uncultured bacterium clone UT-CLY_45 dinitrogenase reductase (nifH) gene, partial cds Length = 329 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF389713.1| Uncultured bacterium clone SIW2-3 dinitrogenase reductase (nifH) gene, partial cds Length = 414 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtc 172
>gb|AF315428.1| Uncultured temperate forest soil bacterium CF018a dinitrogenase reductase (nifH) gene, partial cds Length = 397 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 171 acgtcctcgagctcgaggtc 152
>gb|AF035492.1| Uncultured bacterium NR1608 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF035505.1| Uncultured bacterium NR1621 dinitrogenase reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AY221811.1| Sinorhizobium meliloti clone CC1079A1 dinitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 cgtcctcgagctcgaggtct 114 |||||||||||||||||||| Sbjct: 94 cgtcctcgagctcgaggtct 75
>gb|AC122399.4| Mus musculus BAC clone RP24-92B2 from chromosome 17, complete sequence Length = 184002 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 agtttgaaacttgtcataaa 477 |||||||||||||||||||| Sbjct: 149609 agtttgaaacttgtcataaa 149628
>gb|AY196461.1| Uncultured nitrogen-fixing bacterium clone f1-PA3 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196457.1| Uncultured nitrogen-fixing bacterium clone f1-HW9 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196456.1| Uncultured nitrogen-fixing bacterium clone f1-HW8 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196454.1| Uncultured nitrogen-fixing bacterium clone f1-HW5 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196452.1| Uncultured nitrogen-fixing bacterium clone f1-HW3 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196451.1| Uncultured nitrogen-fixing bacterium clone f1-HW2 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196450.1| Uncultured nitrogen-fixing bacterium clone f1-HW10 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AY196422.1| Uncultured nitrogen-fixing bacterium clone g1-HA1 nitrogenase iron protein (nifH) gene, partial cds Length = 368 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence Length = 162162 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 cccacttttcttcttctttatcct 441 ||||||||||||||||||| |||| Sbjct: 128312 cccacttttcttcttctttttcct 128335
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 ttccttagcccacttttctt 429 |||||||||||||||||||| Sbjct: 143246 ttccttagcccacttttctt 143227
>emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 in linkage group 8, complete sequence Length = 192705 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 tttagatttctttactatat 47 |||||||||||||||||||| Sbjct: 139207 tttagatttctttactatat 139226
>emb|AL355132.19| Human DNA sequence from clone RP11-181D10 on chromosome 13 Contains a ring finger protein 12 (RNF12) pseudogene, the 5' end of the FOXO1A gene for forkhead box O1A (rhabdomyosarcoma), the 3' end of the MRPS31 gene for mitochondrial ribosomal protein S31 and a CpG island, complete sequence Length = 151261 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 ccacttttcttcttctttat 438 |||||||||||||||||||| Sbjct: 101412 ccacttttcttcttctttat 101431
>emb|AL034451.26|HS191E19 Human DNA sequence from clone RP1-191E19 on chromosome 6q23.2-24.2, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 aactctttgtgctttgaaaa 329 |||||||||||||||||||| Sbjct: 86786 aactctttgtgctttgaaaa 86767
>emb|BX323591.13| Zebrafish DNA sequence from clone CH211-208C6 in linkage group 7 Contains the gene for a novel protein similar to vertebrate suppression of tumorigenicity 5 (ST5), a novel gene, the gene for a novel protein similar to vertebrate RAS-like estrogen-regulated growth-inhibitor (RERG) and the gene for a novel protein similar to vertebrate serine/threonine kinase 33 (STK33), complete sequence Length = 201768 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ctacctttactttattttga 513 |||||||||||||||||||| Sbjct: 53855 ctacctttactttattttga 53874
>gb|AC149070.3| Xenopus tropicalis clone ISB1-185H2, complete sequence Length = 99046 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 tttctttactatatttagtacaat 57 ||||||||||||||| |||||||| Sbjct: 9200 tttctttactatattgagtacaat 9223
>dbj|AB188119.1| Rubrivivax gelatinosus nifH gene for iron protein of nitrogenase, partial cds, strain:IAM 14808 Length = 416 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 182 acgtcctcgagctcgaggtc 163
>gb|DQ398434.1| Uncultured cyanobacterium clone FALLSnif02D05 dinitrogen reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ398411.1| Uncultured cyanobacterium clone FALLSnif02A03 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|DQ426402.1| Uncultured bacterium clone 29.170 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426393.1| Uncultured bacterium clone 29.160 NifH-like (nifH) gene, partial sequence Length = 339 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 116 acgtcctcgagctcgaggtc 97
>gb|DQ426380.1| Uncultured bacterium clone 29.145 NifH-like (nifH) gene, partial sequence Length = 336 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 113 acgtcctcgagctcgaggtc 94
>gb|DQ426374.1| Uncultured bacterium clone 29.138 NifH-like (nifH) gene, partial sequence Length = 330 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 107 acgtcctcgagctcgaggtc 88
>gb|DQ426367.1| Uncultured bacterium clone 29.130 NifH-like (nifH) gene, partial sequence Length = 333 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 110 acgtcctcgagctcgaggtc 91
>gb|DQ426354.1| Uncultured bacterium clone 29.116 NifH-like (nifH) gene, partial sequence Length = 288 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 65 acgtcctcgagctcgaggtc 46
>gb|DQ426352.1| Uncultured bacterium clone 29.114 NifH-like (nifH) gene, partial sequence Length = 333 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 110 acgtcctcgagctcgaggtc 91
>gb|DQ426346.1| Uncultured bacterium clone 29.105 NifH-like (nifH) gene, partial sequence Length = 338 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 114 acgtcctcgagctcgaggtc 95
>gb|DQ426320.1| Uncultured bacterium clone 29.76 NifH-like (nifH) gene, partial sequence Length = 318 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426319.1| Uncultured bacterium clone 29.75 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426309.1| Uncultured bacterium clone 29.65 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426297.1| Uncultured bacterium clone 29.53 NifH-like (nifH) gene, partial sequence Length = 312 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426294.1| Uncultured bacterium clone 29.48 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426289.1| Uncultured bacterium clone 29.43 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426283.1| Uncultured bacterium clone 29.36 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ426270.1| Uncultured bacterium clone 29.12 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ425739.1| Uncultured bacterium clone 7.142 NifH-like (nifH) gene, partial sequence Length = 315 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 92 acgtcctcgagctcgaggtc 73
>gb|DQ140599.1| Uncultured bacterium clone nif1003301M15 dinitrogen reductase (nifH) gene, partial cds Length = 327 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|U97122.1|U97122 Azoarcus tolulyticus nitrogenase iron protein (nifH) gene, partial cds Length = 336 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 179 acgtcctcgagctcgaggtc 160
>gb|AF216931.1|AF216931 Unidentified nitrogen-fixing bacteria clone F2 dinitrogenase reductase (nifH) gene, partial cds Length = 417 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 191 acgtcctcgagctcgaggtc 172
>gb|AC175058.1| Mus musculus BAC clone RP23-210C4 from chromosome 17, complete sequence Length = 218488 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agtttgaaacttgtcataaa 477 |||||||||||||||||||| Sbjct: 128046 agtttgaaacttgtcataaa 128027
>emb|AL954710.27| Mouse DNA sequence from clone RP23-275J10 on chromosome 4, complete sequence Length = 202551 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 gtgctttgaaaacagacataggga 341 |||||||||||||| ||||||||| Sbjct: 115047 gtgctttgaaaacaaacataggga 115024
>gb|AC144364.3| Didelphis virginiana clone LB3-157N2, complete sequence Length = 140935 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 cttttcttcttctttatcct 441 |||||||||||||||||||| Sbjct: 3454 cttttcttcttctttatcct 3473
>gb|AF046840.1|AF046840 Marine proteobacterium 'Sippewissett 2-21' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF046836.1|AF046836 Marine proteobacterium 'Bird Shoal 8-1' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>gb|AF046830.1|AF046830 Marine proteobacterium 'Bird Shoal 1-2' nitrogenase reductase (nifH) gene, partial cds Length = 324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 acgtcctcgagctcgaggtc 113 |||||||||||||||||||| Sbjct: 95 acgtcctcgagctcgaggtc 76
>emb|CT010450.15| Mouse DNA sequence from clone RP23-443B9 on chromosome 12, complete sequence Length = 193155 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ctatatttagtacaattgtt 61 |||||||||||||||||||| Sbjct: 36287 ctatatttagtacaattgtt 36268
>gb|AC138397.4| Mus musculus BAC clone RP23-65O11 from 8, complete sequence Length = 246976 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 ttccttagcccacttttctt 429 |||||||||||||||||||| Sbjct: 224303 ttccttagcccacttttctt 224322
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 40.1 bits (20), Expect = 7.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 212 gaataaaccaactttaagatgggataagatgctcgatagggcat 255 ||||||||||| || || ||||||||| || ||||||| ||||| Sbjct: 83762 gaataaaccaatttaaaaatgggataacatcctcgataaggcat 83805
>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold Length = 1751794 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 cttttcttcttctttatcct 441 |||||||||||||||||||| Sbjct: 3454 cttttcttcttctttatcct 3473
>emb|AL929310.8| Zebrafish DNA sequence from clone CH211-55A7, complete sequence Length = 156634 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 tttgaaacttgtcataaata 479 |||||||||||||||||||| Sbjct: 148566 tttgaaacttgtcataaata 148547
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 493 cctacctttactttattttgaatc 516 |||||||||||||| ||||||||| Sbjct: 67539 cctacctttactttgttttgaatc 67562 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,786,409 Number of Sequences: 3902068 Number of extensions: 5786409 Number of successful extensions: 123570 Number of sequences better than 10.0: 212 Number of HSP's better than 10.0 without gapping: 216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 122396 Number of HSP's gapped (non-prelim): 1103 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
