Clone Name | rbasd2f01 |
---|---|
Clone Library Name | barley_pub |
>FA11_MOUSE (Q91Y47) Coagulation factor XI precursor (EC 3.4.21.27) (Plasma| thromboplastin antecedent) (PTA) (FXI) [Contains: Coagulation factor XIa heavy chain; Coagulation factor XIa light chain] Length = 624 Score = 32.3 bits (72), Expect = 0.28 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Frame = +3 Query: 147 CR--CYHHPTCSILSIAAVHRPHEYALPCHHLRLCWAPDSMTIHLNXXXXXXXXXXXXXS 320 CR C HHPTC + + P E HL L +S L S Sbjct: 226 CRRICTHHPTCLFFTFFSQAWPKESQ---RHLCLLKTSES---GLPSTRITKIHALSGFS 279 Query: 321 IGHCRHTNPPPCH 359 + HCRH+ P CH Sbjct: 280 LQHCRHSVPVFCH 292
>TUSA_PSEU2 (Q4ZVE8) Sulfurtransferase tusA homolog (EC 2.8.1.-)| Length = 84 Score = 31.2 bits (69), Expect = 0.62 Identities = 22/58 (37%), Positives = 28/58 (48%) Frame = -3 Query: 281 DIEVDCHGVWCPAEPQMMTWKRIFMRSMHSGDR*YTAGGVMITSATFWSTRPSISTIC 108 D E+D G++CP EP MM +H R AGG++ AT STR I C Sbjct: 11 DAELDAVGLFCP-EPVMM---------LHQKVRDLPAGGLLKVIATDPSTRRDIPKFC 58
>NALP2_HUMAN (Q9NX02) NACHT-, LRR- and PYD-containing protein 2 (PYRIN domain-| and NACHT domain-containing protein 1) (PYRIN-containing APAF1-like protein 2) (Nucleotide-binding site protein 1) Length = 1062 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 1/72 (1%) Frame = +3 Query: 66 VCLIILSVKT-TFYTTNGGDRGTS*PKRCRCYHHPTCSILSIAAVHRPHEYALPCHHLRL 242 +CL + KT T+ T G D+ P C HP C++ + V C Sbjct: 747 LCLALRGHKTVTYLTLQGNDQDDMFPALCEVLRHPECNLRYLGLV--------SCSATTQ 798 Query: 243 CWAPDSMTIHLN 278 WA S+ + +N Sbjct: 799 QWADLSLALEVN 810
>CDYL2_HUMAN (Q8N8U2) Chromodomain Y-like protein 2 (CDY-like 2)| Length = 506 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -2 Query: 228 DMEAHIHEVDAQRRSIIYCRWGDDNIGNVLVNSSLDLHHLSCRKLFLQKE 79 D+ H+ E D + + ++ +G+ L N L+LH RKL +K+ Sbjct: 180 DLNDHVGEQDMGECDVDHATLAENGLGSALTNGGLNLHSPVKRKLEAEKD 229
>COX15_YEAST (P40086) Cytochrome c oxidase assembly protein COX15| Length = 486 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/55 (21%), Positives = 26/55 (47%) Frame = +2 Query: 32 QLGSKWPTNWLGMLNYSFCKNNFLHDKWWRSRDELTKTLPMLSSPHLQYIIDRRC 196 ++G +W + +++ +FC+ D WWR+ +L +P ++ R C Sbjct: 326 KMGERWFPSSRELMDENFCRREDKKDLWWRN---------LLENPVTVQLVHRTC 371
>ODO1_RALEU (Q59106) 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)| (Alpha-ketoglutarate dehydrogenase) Length = 950 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Frame = +2 Query: 2 TYVSDPKM-LTQLGSKWPTNWLGMLNYSFCK-NNFLHDKWWRSRDELTKTLPMLSSPHLQ 175 TY M L +L + + G + + F ++ +WW+ R E T++ P+ + + Sbjct: 146 TYFGKESMSLRELLNNLRETYCGTIGFEFMYVSDQAQKRWWQERLETTRSKPVFTLEKKK 205 Query: 176 YIIDR 190 +I+DR Sbjct: 206 HILDR 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,610,437 Number of Sequences: 219361 Number of extensions: 1015433 Number of successful extensions: 2449 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2446 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)