Clone Name | rbasd1p19 |
---|---|
Clone Library Name | barley_pub |
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 35.8 bits (81), Expect = 0.10 Identities = 27/100 (27%), Positives = 43/100 (43%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDGLARACAKA 391 G+P+PI G+ + + +D+A AF VL + + VYNI ++ +A +K Sbjct: 210 GKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEVN-HVYNIGTTRERRVIDVANDISKL 268 Query: 390 GGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASK 271 G I Y + PF DQ +F +K K Sbjct: 269 FGIDPDSTIQY---------VENRPFNDQRYFLDDQKLKK 299
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 35.8 bits (81), Expect = 0.10 Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 1/116 (0%) Frame = -2 Query: 573 AGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDGLAR-ACA 397 +G+P+PI G+ + + +D+A AF VL + VYN+ + +AR C Sbjct: 211 SGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEIG-HVYNVGTKRERRVIDVARDICK 269 Query: 396 KAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDGL 229 G PE I + PF DQ +F +K K LG + DGL Sbjct: 270 LFGKDPESSIQFVENR----------PFNDQRYFLDDQKLKK-LGWQERTNWEDGL 314
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 34.7 bits (78), Expect = 0.23 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Frame = -1 Query: 490 QGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*AG---DHPLQPQGLRFRQ---- 332 Q P Q + Q L QQV H+ A G+ G +P A ++P PQ ++ Q Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLTMGKEMPHAQYGKEYPHLPQYMKEVQPVPR 98 Query: 331 --EEGLPLQRPAFLCVCGEGQQGPRGYAGVRPPRRLDGL 221 +E +P + G+QGPRG G R P GL Sbjct: 99 MGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGL 137
>ACBB_ACTS5 (Q9ZAE8) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 341 Score = 33.9 bits (76), Expect = 0.40 Identities = 32/124 (25%), Positives = 46/124 (37%) Frame = -2 Query: 591 FFHRLKAGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDGL 412 F RL G +P+ G I HV D LG +A +VY+I G T L Sbjct: 196 FVTRLLDGLDVPVYGDGRNIRDWLHVSDHCRGLALALGAGRAG-EVYHIGGGWEATNLEL 254 Query: 411 ARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDG 232 +A G I F +K D+ + K + +LG P D DG Sbjct: 255 TEILLEACGARRSRI------SFVTDRKG----HDRRYSLDYSKIAGELGYRPRVDFTDG 304 Query: 231 LTDS 220 + ++ Sbjct: 305 IAET 308
>GALE_CORGL (Q45291) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 329 Score = 33.9 bits (76), Expect = 0.40 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Frame = -2 Query: 585 HRLKA---GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASK-QVYNISGSKYVTFD 418 HR K G P P+ G + H+ DLA A + L + +A K +++N+ + Sbjct: 197 HREKTFMFGDDWPTPD-GTAVRDYIHILDLAKAHVLALESNEAGKHRIFNLGSGDGYSVK 255 Query: 417 GLARACAKAGGFPEP-EIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEY 247 + C + G P P E+ D AS EKA ++LG TPE+ Sbjct: 256 QVVEMCREVTGHPIPAEVAPRRAGD------------PATLIASSEKAKQELGWTPEH 301
>RFBB_SHIFL (P37777) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 33.9 bits (76), Expect = 0.40 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISG-SKYVTFDGLARACAK 394 G+ +PI G+QI +V+D A A V+ KA + YNI G ++ D + C Sbjct: 218 GKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVLTICDL 276 Query: 393 AGGFPEPEIIHYNPKDFDFGKKKAF----PFRDQHFFASVEKASKDLGVTPEYDLLDGL 229 EI+ PK+ + ++ + P D+ + +K S++LG P+ G+ Sbjct: 277 L-----DEIV---PKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGI 327
>RFBB2_ECOLI (P55293) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 33.5 bits (75), Expect = 0.52 Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISG-SKYVTFDGLARACAK 394 G+ +PI G+QI +V+D A A V+ KA + YNI G ++ D + C Sbjct: 218 GKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVFTICDL 276 Query: 393 AGGFPEPEIIHYNPKDFDFGKKKAF----PFRDQHFFASVEKASKDLGVTPEYDLLDGL 229 EI+ PK+ + ++ + P D+ + +K S++LG P+ G+ Sbjct: 277 L-----DEIV---PKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGI 327
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 33.1 bits (74), Expect = 0.68 Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 1/125 (0%) Frame = -1 Query: 490 QGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*AGDHPLQPQGLRFRQEEGLPLQ 311 Q R+P +A V LR + LR A R+ VP G HP + + + R ++G P + Sbjct: 48 QDARKPPA-RARVPQLRGRDFALRRAD---RRVEHVPLRGRHP-RVRRVPQRDQDGAPRR 102 Query: 310 RPAFLCVCGEGQQGPRGYAGVRPPRRLDG-LVQPRLRPRDLQEGG*LHHGRHDPRQEARE 134 R G G +G +AG R +D L Q PR + G H RQ RE Sbjct: 103 RHLLRRRVG-GHRGRNRHAGDRRAPGVDSRLRQQHQHPRGRHASDRVQDGAHPRRQRLRE 161 Query: 133 RLRRA 119 + R A Sbjct: 162 QPRHA 166
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 33.1 bits (74), Expect = 0.68 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 9/99 (9%) Frame = -1 Query: 490 QGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*---AGDHPLQPQGLRFRQ---- 332 Q P Q + Q L QQV H+ A G+ G +P ++P PQ ++ Q Sbjct: 39 QIPPQMPPQIPQYQPLGQQVPHMPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPR 98 Query: 331 --EEGLPLQRPAFLCVCGEGQQGPRGYAGVRPPRRLDGL 221 +E +P + G+QGPRG G R P GL Sbjct: 99 MGKEAVPKKGKEIPLASLRGEQGPRGEPGPRGPPGPPGL 137
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 1) (AtGER1) (AtFX) Length = 312 Score = 32.0 bits (71), Expect = 1.5 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 2/127 (1%) Frame = -2 Query: 588 FHRLKAG--RPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDG 415 FH K + + G+ + + HV DLA A + +L + V NI + VT Sbjct: 190 FHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLLDRYSGLEHV-NIGSGQEVTIRE 248 Query: 414 LARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLD 235 LA + GF +D K P + S + AS LG TP+ L D Sbjct: 249 LAELVKEVVGFE-------GKLGWDCTKPDGTP---RKLMDSSKLAS--LGWTPKVSLRD 296 Query: 234 GLTDSYN 214 GL+ +Y+ Sbjct: 297 GLSQTYD 303
>GALE2_CYATE (O65781) UDP-glucose 4-epimerase GEPI48 (EC 5.1.3.2)| (Galactowaldenase) (UDP-galactose 4-epimerase) Length = 350 Score = 32.0 bits (71), Expect = 1.5 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%) Frame = -2 Query: 543 GNQITQLGHVKDLAT---AFIKVLGNPKASKQVYNISGSKYVTFDGLARACAKAGGFPEP 373 G + HV DLA A ++ L +PK +VYN+ K + + +A +A G P Sbjct: 232 GTGVRDYIHVVDLADGHIAALRKLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKKIP 291 Query: 372 EIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDGLTDSYN 214 ++ G++ P + +AS KA ++L +Y + + D +N Sbjct: 292 LVM--------AGRR---PGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWN 333
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase 2) (AtGER2) Length = 328 Score = 32.0 bits (71), Expect = 1.5 Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 2/126 (1%) Frame = -2 Query: 588 FHRLKAGRP--IPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDG 415 FH KA + + +G+ + + HV DLA A + ++ + V N+ VT Sbjct: 204 FHEAKANNADEVVVWGSGSPLREFLHVDDLADACVFLMDQYSGFEHV-NVGSGVEVTIKE 262 Query: 414 LARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLD 235 LA + GF + +D K P + S + AS LG TP+ L D Sbjct: 263 LAELVKEVVGFKGKLV-------WDTTKPDGTP---RKLMDSSKLAS--LGWTPKISLKD 310 Query: 234 GLTDSY 217 GL+ +Y Sbjct: 311 GLSQTY 316
>RFBB1_ECOLI (P37759) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 32.0 bits (71), Expect = 1.5 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISG-SKYVTFDGLARACAK 394 G+ +PI G+QI +V+D A A V+ KA + YNI G ++ D + C Sbjct: 218 GKALPIYGKGDQIRDWLYVEDHARALYTVVTEGKAG-ETYNIGGHNEKKNIDVVLTICDL 276 Query: 393 AGGFPEPEIIHYNPKDFDFGKKKAF----PFRDQHFFASVEKASKDLGVTPEYDLLDGL 229 EI+ PK+ + ++ + P D+ + EK + LG P+ G+ Sbjct: 277 L-----DEIV---PKEKSYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGI 327
>RFBB_XANCP (P55295) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 351 Score = 31.6 bits (70), Expect = 2.0 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 1/119 (0%) Frame = -2 Query: 573 AGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISG-SKYVTFDGLARACA 397 AG P+P+ G Q+ V D A VL + + YN+ G S+ + + CA Sbjct: 208 AGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAKGRVG-ETYNVGGNSERQNIEVVQAICA 266 Query: 396 KAGGFPEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDGLTDS 220 E P++ P D+ + K +LG P Y G+ + Sbjct: 267 LLDQHRPRE--DGKPRESQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQT 323
>RFBB_SALTY (P26391) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 361 Score = 31.6 bits (70), Expect = 2.0 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISG-SKYVTFDGLARACAK 394 G+P+PI G+QI +V+D A A V+ KA + YNI G ++ D + C Sbjct: 218 GKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAG-ETYNIGGHNEKKNLDVVFTICDL 276 Query: 393 AGGFPEPEIIHYNPKDFDFGKKKAF----PFRDQHFFASVEKASKDLGVTP 253 EI+ PK + ++ + P D+ + K S++LG P Sbjct: 277 L-----DEIV---PKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKP 319
>ADO1_ARATH (Q94BT6) Adagio protein 1 (Protein ZEITLUPE) (LOV kelch protein 1)| (Flavin-binding kelch repeat F-box protein 1-like protein 2) (FKF1-like protein 2) (F-box only protein 2b) (FBX2b) (Clock-associated PAS protein ZTL) Length = 609 Score = 31.6 bits (70), Expect = 2.0 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%) Frame = -1 Query: 346 LRFRQEE----GLPLQRPAFLCVCGEGQQGPRGYAGVRPPRRLD 227 L+FR + L + P + CV G G G GV PP RLD Sbjct: 475 LKFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVAPPPRLD 518
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 31.2 bits (69), Expect = 2.6 Identities = 42/130 (32%), Positives = 46/130 (35%), Gaps = 10/130 (7%) Frame = -1 Query: 538 PDHPARPCQGFGDGLHQGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*AGDHPL 359 P P G+ H GP P GEQ G+ A KG P Sbjct: 738 PQGPTGETGPIGERGHPGPPGPPGEQ-GLPGA---------AGKEGAKGDPGPQGVSGKD 787 Query: 358 QPQGLR-FRQEEGLPLQRPAFLCVCGEGQQGP---------RGYAGVRPPRRLDGLVQPR 209 P GLR F E GLP + A GEG QGP RG AG P L G P+ Sbjct: 788 GPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQ 847 Query: 208 LRPRDLQEGG 179 P E G Sbjct: 848 GPPGPAGEKG 857
>NPD_CLOPE (Q8XNS6) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 244 Score = 31.2 bits (69), Expect = 2.6 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 20/101 (19%) Frame = -2 Query: 600 EEWF-FHRLKAGRPIPIPNAGN----QITQLGHVKDLATAFIKVLGNPKASKQVYNISGS 436 EE+F F++ K P PN + ++ ++G +K + T I L SK V+ + GS Sbjct: 66 EEFFNFYKAKLIYPNSKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAGSKNVFELHGS 125 Query: 435 ---------------KYVTFDGLARACAKAGGFPEPEIIHY 358 K++ C K GG +P+++ Y Sbjct: 126 VLRNYCVDCHTFYDEKFILESKGVPKCTKCGGIVKPDVVLY 166
>GA2L2_HUMAN (Q8NHY3) GAS2-like protein 2 (Growth arrest-specific 2-like 2)| (GAS2-related protein on chromosome 17) (GAR17 protein) Length = 880 Score = 31.2 bits (69), Expect = 2.6 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 4/95 (4%) Frame = -1 Query: 622 PSQLQPCGGVVLPPAQGWSPDPHP*RWEP----DHPARPCQGFGDGLHQGPRQPQGEQAG 455 PSQ QP + ++ SP P P W+ D RP PR + AG Sbjct: 302 PSQTQP----TMTISRSQSPPP-PVDWKTYTSSDRRLRP------PTPSSPRPRRERGAG 350 Query: 454 VQHLRQQVCHLRWASTGMRKGWRVP*AGDHPLQPQ 350 R+ LR + WR P AGD P PQ Sbjct: 351 TGASREMAPFLRCQERSLIPSWRQPTAGDSPPSPQ 385
>CRU4_BRANA (P33522) Cruciferin CRU4 precursor (11S globulin) (12S storage| protein) [Contains: Cruciferin CRU4 alpha chain; Cruciferin CRU4 beta chain] Length = 465 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -1 Query: 520 PCQGFGDGLHQGPRQPQGEQAGVQHLRQQVCHLRWAST 407 P G G G QG Q QG+ G + + Q+V HLR T Sbjct: 113 PVFGQGQGQEQGQGQGQGQGQGFRDMHQKVEHLRSGDT 150
>NADM_PYRAE (Q8ZX62) Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1)| (NAD(+) pyrophosphorylase) (NAD(+) diphosphorylase) (NMN adenylyltransferase) Length = 178 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -2 Query: 561 IPIPNAGNQITQLGHVKDLATAF-IKVLGNP 472 IP+PN N + LG VK LA F I GNP Sbjct: 74 IPVPNVENNLEWLGRVKSLAPPFQIVYTGNP 104
>STRE_STRGR (P29782) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 328 Score = 30.4 bits (67), Expect = 4.4 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 3/124 (2%) Frame = -2 Query: 591 FFHRLKAGRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGSKYVTFDGL 412 F L G +P+ G + + HV D V +A + VYNI G ++ L Sbjct: 194 FITLLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGR-VYNIGGGATLSNKEL 252 Query: 411 ARACAKAGGFPEPEIIHYNPKDFDFGKKKAFPFR---DQHFFASVEKASKDLGVTPEYDL 241 +A G D+G + R D+ + + ++LG P DL Sbjct: 253 VGLLLEAAGA-------------DWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDL 299 Query: 240 LDGL 229 DGL Sbjct: 300 ADGL 303
>UVRB_CHRVO (Q7NTA7) UvrABC system protein B (Protein uvrB) (Excinuclease ABC| subunit B) Length = 670 Score = 30.0 bits (66), Expect = 5.7 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%) Frame = -2 Query: 273 KDLGVTPEYDLLDGLTDSY----NLDFGRGTFRKEAD 175 K+ TP+ D++ LT +LDFGRGTFR D Sbjct: 167 KEGETTPQRDIISRLTTMQYSRNDLDFGRGTFRVRGD 203
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 30.0 bits (66), Expect = 5.7 Identities = 41/130 (31%), Positives = 46/130 (35%), Gaps = 10/130 (7%) Frame = -1 Query: 538 PDHPARPCQGFGDGLHQGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*AGDHPL 359 P P G+ H GP P GEQ G+ A KG P Sbjct: 969 PQGPTGETGPIGERGHPGPPGPPGEQ-GLPGA---------AGKEGAKGDPGPQGISGKD 1018 Query: 358 QPQGLR-FRQEEGLPLQRPAFLCVCGEGQQGP---------RGYAGVRPPRRLDGLVQPR 209 P G+R F E GLP + A GEG QGP RG AG P L G P+ Sbjct: 1019 GPAGIRGFPGERGLPGAQGAPGLKGGEGPQGPQGPVGSPGERGSAGAAGPIGLPGRPGPQ 1078 Query: 208 LRPRDLQEGG 179 P E G Sbjct: 1079 GPPGPAGEKG 1088
>METE_PYRAB (Q9V085) Probable methylcobalamin:homocysteine methyltransferase| (EC 2.1.1.-) (Methionine synthase) Length = 338 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/48 (31%), Positives = 24/48 (50%) Frame = -2 Query: 495 FIKVLGNPKASKQVYNISGSKYVTFDGLARACAKAGGFPEPEIIHYNP 352 F+K L + V ++ + T D + RA KA + EPE ++ NP Sbjct: 245 FLKKLSGKELGFGVVDVHNPRIETVDEIVRAIKKAFNYLEPEWLYINP 292
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 29.6 bits (65), Expect = 7.5 Identities = 35/125 (28%), Positives = 48/125 (38%), Gaps = 4/125 (3%) Frame = -1 Query: 541 EPDHPARPCQGFGDGLHQGPRQPQGEQAGVQHLRQQVCHLRWASTGMRKGWRVP*AGDHP 362 +P +P QG G Q RQP Q G Q+ + + + P G Sbjct: 180 QPGQLQQPAQGQQPGQGQQGRQPGQGQPGYYPTSSQLQPGQLQQPAQGQQGQQPGQGQQG 239 Query: 361 LQPQGLRFRQEEGLPLQRPAFLCVCGEGQQGP---RGYAGVRPPR-RLDGLVQPRLRPRD 194 QP G + +G Q+P G+GQQG +G G P + G QP P Sbjct: 240 QQP-GQGQQPGQGQQGQQPGQGQQPGQGQQGQQLGQGQQGYYPTSLQQSGQGQPGYYPTS 298 Query: 193 LQEGG 179 LQ+ G Sbjct: 299 LQQLG 303
>RFFG_HAEIN (P44914) dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)| Length = 338 Score = 29.6 bits (65), Expect = 7.5 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 3/117 (2%) Frame = -2 Query: 570 GRPIPIPNAGNQITQLGHVKDLATAFIKVLGNPKASKQVYNISGS-KYVTFDGLARACAK 394 G+P+PI G QI V+D A VL + + YNI G+ + + + R C Sbjct: 211 GKPLPIYGDGQQIRDWLFVEDHVQASYLVLTKGRVGEN-YNIGGNCEKTNLEVVKRICQL 269 Query: 393 AGGF--PEPEIIHYNPKDFDFGKKKAFPFRDQHFFASVEKASKDLGVTPEYDLLDGL 229 +P I Y F K + P D + K +LG P+ GL Sbjct: 270 LEELAPSKPNHIKYYEDLMTFVKDR--PGHDVRYSLDCSKIHAELGWQPQITFEQGL 324
>FUT1_PIG (Q29043) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 365 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 7/64 (10%) Frame = -1 Query: 448 HLRQQVC-------HLRWASTGMRKGWRVP*AGDHPLQPQGLRFRQEEGLPLQRPAFLCV 290 HLR+Q+ HLR + G+ +R+P GD P G+ R+ + L + + V Sbjct: 176 HLREQIRSEFTLHDHLRQEAQGVLSQFRLPRTGDRPSTFVGVHVRRGDYLRVMPKRWKGV 235 Query: 289 CGEG 278 G+G Sbjct: 236 VGDG 239
>AHPF_SALTY (P19480) Alkyl hydroperoxide reductase subunit F (EC 1.6.4.-)| (Alkyl hydroperoxide reductase F52A protein) Length = 521 Score = 29.3 bits (64), Expect = 9.8 Identities = 13/30 (43%), Positives = 21/30 (70%) Frame = -1 Query: 340 FRQEEGLPLQRPAFLCVCGEGQQGPRGYAG 251 F+++ LP+++P+FL QQGPR +AG Sbjct: 52 FKEDNTLPVRKPSFLITNPGSQQGPR-FAG 80
>SYI_STAES (Q8CSX1) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 916 Score = 29.3 bits (64), Expect = 9.8 Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%) Frame = -2 Query: 492 IKVLGNPKASKQVYNISGSKYVTFDGLARACAKAGGFPEPEI---IHYNPKDFDFGKKKA 322 + + +P+ + YN++G KY+ L+ A A+A G+ + I + K+ +F + + Sbjct: 241 VAITVHPELNYGQYNVNGHKYIVAQALSEAVAEALGWDKDSIQLEKEFTGKELEFVEAQ- 299 Query: 321 FPFRDQ 304 PF D+ Sbjct: 300 HPFLDR 305
>CATE_RHIME (Q9X576) Catalase C (EC 1.11.1.6) (KAT2)| Length = 705 Score = 29.3 bits (64), Expect = 9.8 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +1 Query: 439 AGDVVHLLARLGVAEDLDEGRRQILDMA 522 AG V LL R G+AE LDEG ++ D A Sbjct: 654 AGAAVPLLERAGIAELLDEGTIELTDAA 681
>CBP1_CAEEL (P34545) Protein cbp-1| Length = 2056 Score = 29.3 bits (64), Expect = 9.8 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 13/169 (7%) Frame = -1 Query: 619 SQLQPCG--GVVLPPAQGWSPDPHP*RWEPDHPARPCQGFGD-GLHQGPRQPQGEQAGVQ 449 S + P G ++ PP+ G P P P +P P +P G G+ QG +Q Q G Q Sbjct: 131 SPMMPNGTPNMMSPPSMGRVPGPSPGGPQPPGPGQPQMRPGQPGMFQGDQQQQ-MMMGAQ 189 Query: 448 HLRQQVCHLRW---------ASTGMRKGW-RVP*AGDHPLQPQGLRFRQEEGLPLQRPAF 299 + R+ + GM +G+ V G P QP G +P Sbjct: 190 GQQFPGMMHRYPYAQGGPPPGAQGMPQGYPGVSRGGPTPGQPMGRGAMMNGAMP------ 243 Query: 298 LCVCGEGQQGPRGYAGVRPPRRLDGLVQPRLRPRDLQEGG*LHHGRHDP 152 G +G G+ P ++ ++QP + R + G +G+ P Sbjct: 244 ----RSGPMPTQGRPGIPPNQQ--AMMQPMMTDRQFMQHG--QYGQQRP 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,308,890 Number of Sequences: 219361 Number of extensions: 2138920 Number of successful extensions: 7992 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 7316 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7983 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)