Clone Name	rbasd2e21
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for ...	58	4e-05
2	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	58	4e-05
3	dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D...	58	4e-05
4	ref|XM_467417.1| Oryza sativa (japonica cultivar-group), mRNA	56	1e-04
5	gb|AY107338.1| Zea mays PCO113049 mRNA sequence	56	1e-04
6	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	44	0.55
7	emb|CT967308.1| Human DNA sequence from clone XXyac-830B11 on ch...	44	0.55
8	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	44	0.55
9	ref|XM_528429.1| PREDICTED: Pan troglodytes similar to G protein...	42	2.2
10	ref|XM_595269.2| PREDICTED: Bos taurus similar to G protein-coup...	42	2.2
11	gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, comple...	42	2.2
12	gb|AF455756.1| Mus musculus tenascin-N (Tnn) mRNA, complete cds	42	2.2
13	gb|AY278562.1| Homo sapiens G-protein coupled receptor GPR144 (G...	42	2.2
14	gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp...	42	2.2
15	gb|AF453325.2| Bos taurus pancreatic anionic trypsinogen (TRYP8)...	42	2.2
16	dbj|AK048033.1| Mus musculus 16 days embryo head cDNA, RIKEN ful...	42	2.2
17	gb|AY255620.1| Homo sapiens G protein-coupled receptor PGR24 mRN...	42	2.2
18	gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosom...	42	2.2
19	ref|NM_182611.1| Homo sapiens G protein-coupled receptor 144 (GP...	42	2.2
20	ref|NM_177839.2| Mus musculus tenascin N (Tnn), mRNA	42	2.2
21	emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on ch...	42	2.2
22	dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix ...	42	2.2
23	ref|XM_636459.1| Dictyostelium discoideum RNA binding protein (D...	40	8.5
24	ref|NM_001001876.1| Gallus gallus basement membrane-specific hep...	40	8.5
25	ref|XM_757515.1| Ustilago maydis 521 hypothetical protein (UM064...	40	8.5
26	ref|XM_862851.1| PREDICTED: Canis familiaris similar to Rap guan...	40	8.5
27	ref|XM_862846.1| PREDICTED: Canis familiaris similar to Rap guan...	40	8.5
28	ref|XM_862840.1| PREDICTED: Canis familiaris similar to Rap guan...	40	8.5
29	ref|XM_539787.2| PREDICTED: Canis familiaris similar to Rap guan...	40	8.5
30	ref|XM_848711.1| PREDICTED: Canis familiaris similar to Rap guan...	40	8.5
31	gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, com...	40	8.5
32	gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, co...	40	8.5
33	gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosom...	40	8.5
34	emb|AL353624.8| Human DNA sequence from clone RP1-243N19 on chro...	40	8.5
35	emb|AL021408.1|HS523C21 Human DNA sequence from clone RP3-523C21...	40	8.5
36	gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosom...	40	8.5
37	emb|AJ584653.1| Gallus gallus mRNA for basement membrane-specifi...	40	8.5
38	gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, co...	40	8.5
39	emb|BX322588.8| Zebrafish DNA sequence from clone DKEYP-55C8 in ...	40	8.5
40	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.5
41	emb|BX322607.6| Zebrafish DNA sequence from clone DKEYP-20F6 in ...	40	8.5
42	gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occlu...	40	8.5
43	gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, co...	40	8.5
44	gb|AC130004.4| Homo sapiens 3 BAC RP11-237K2 (Roswell Park Cance...	40	8.5
45	dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic D...	40	8.5
46	dbj|AB019231.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	8.5
47	gb|AF128626.1|AF128626 Dictyostelium discoideum RNA binding prot...	40	8.5
48	dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	8.5
49	gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, compl...	40	8.5
50	emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in...	40	8.5
51	gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1...	40	8.5
52	emb|AL645483.7| Mouse DNA sequence from clone RP23-213O14 on chr...	40	8.5

---

>dbj|AB110204.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, contig of clone: OsNMCP1aSE2Nco-5 and
            12FPG031
          Length = 3708

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 277  ttgttatgtcgtgaagaaagaccatagcgttttcccaatcgatttgtttcgcc 329
            |||| |||| |||||||||||||||||| |||||||||| |||| ||| ||||
Sbjct: 3471 ttgtcatgtagtgaagaaagaccatagctttttcccaattgattggttccgcc 3419



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                  
Query: 177  catcatcaccaaacacaccaacctagatttccaagaat 214
            |||||||||||| |||| ||||||||| ||||||||||
Sbjct: 3568 catcatcaccaagcaca-caacctagagttccaagaat 3532



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 466  gaggttccttccgtgtcatcagcggtagtttctaccgtctg 506
            ||||||||||| |||||||| |||||||  ||||| |||||
Sbjct: 3176 gaggttccttctgtgtcatctgcggtagcctctactgtctg 3136

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 277      ttgttatgtcgtgaagaaagaccatagcgttttcccaatcgatttgtttcgcc 329
                |||| |||| |||||||||||||||||| |||||||||| |||| ||| ||||
Sbjct: 29401192 ttgtcatgtagtgaagaaagaccatagctttttcccaattgattggttccgcc 29401244



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                      
Query: 177      catcatcaccaaacacaccaacctagatttccaagaat 214
                |||||||||||| |||| ||||||||| ||||||||||
Sbjct: 29401095 catcatcaccaagcaca-caacctagagttccaagaat 29401131



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 466      gaggttccttccgtgtcatcagcggtagtttctaccgtctg 506
                ||||||||||| |||||||| |||||||  ||||| |||||
Sbjct: 29401654 gaggttccttctgtgtcatctgcggtagcctctactgtctg 29401694

---

>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 277   ttgttatgtcgtgaagaaagaccatagcgttttcccaatcgatttgtttcgcc 329
             |||| |||| |||||||||||||||||| |||||||||| |||| ||| ||||
Sbjct: 52064 ttgtcatgtagtgaagaaagaccatagctttttcccaattgattggttccgcc 52116



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                   
Query: 177   catcatcaccaaacacaccaacctagatttccaagaat 214
             |||||||||||| |||| ||||||||| ||||||||||
Sbjct: 51967 catcatcaccaagcaca-caacctagagttccaagaat 52003



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 466   gaggttccttccgtgtcatcagcggtagtttctaccgtctg 506
             ||||||||||| |||||||| |||||||  ||||| |||||
Sbjct: 52526 gaggttccttctgtgtcatctgcggtagcctctactgtctg 52566

---

>ref|XM_467417.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3468

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 282  atgtcgtgaagaaagaccatagcgttttcccaatcgatttgtttcgcc 329
            |||| |||||||||||||||||| |||||||||| |||| ||| ||||
Sbjct: 3466 atgtagtgaagaaagaccatagctttttcccaattgattggttccgcc 3419



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 466  gaggttccttccgtgtcatcagcggtagtttctaccgtctg 506
            ||||||||||| |||||||| |||||||  ||||| |||||
Sbjct: 3176 gaggttccttctgtgtcatctgcggtagcctctactgtctg 3136

---

>gb|AY107338.1| Zea mays PCO113049 mRNA sequence
          Length = 866

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                               
Query: 366 agcatgggcatcaacagtttcagcctgggagaactcttgcaactgggatgca 417
           ||||||||||||| ||  |||| ||||||| ||||| |||||||||||||||
Sbjct: 335 agcatgggcatcaccaacttcaacctgggaaaactcatgcaactgggatgca 284

---

>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome
          Length = 149705

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 309   tcccaatcgatttgtttcgccatcca 334
             |||||||| |||||||||||||||||
Sbjct: 53889 tcccaatcaatttgtttcgccatcca 53864

---

>emb|CT967308.1| Human DNA sequence from clone XXyac-830B11 on chromosome 6, complete
            sequence
          Length = 31833

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 505  tgcttttttcctctcctcacag 526
            ||||||||||||||||||||||
Sbjct: 5089 tgcttttttcctctcctcacag 5110

---

>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D
          Length = 149987

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 309   tcccaatcgatttgtttcgccatcca 334
             |||||||| |||||||||||||||||
Sbjct: 11490 tcccaatcaatttgtttcgccatcca 11515

---

>ref|XM_528429.1| PREDICTED: Pan troglodytes similar to G protein-coupled receptor 144;
            G-protein coupled receptor GPR144 (LOC473059), mRNA
          Length = 3456

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 542  gtggaggggctgctgctgtgg 562
            |||||||||||||||||||||
Sbjct: 2857 gtggaggggctgctgctgtgg 2877

---

>ref|XM_595269.2| PREDICTED: Bos taurus similar to G protein-coupled receptor 144
           (LOC517106), mRNA
          Length = 1776

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 542 gtggaggggctgctgctgtgg 562
           |||||||||||||||||||||
Sbjct: 931 gtggaggggctgctgctgtgg 951

---

>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence
          Length = 213229

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 545   gaggggctgctgctgtggcat 565
             |||||||||||||||||||||
Sbjct: 37188 gaggggctgctgctgtggcat 37208

---

>gb|AF455756.1| Mus musculus tenascin-N (Tnn) mRNA, complete cds
          Length = 5773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 461  ctttagaggttccttccgtgtcatc 485
            ||||||||||||||||| |||||||
Sbjct: 4931 ctttagaggttccttccatgtcatc 4955

---

>gb|AY278562.1| Homo sapiens G-protein coupled receptor GPR144 (GPR144) mRNA,
            complete cds
          Length = 2892

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 542  gtggaggggctgctgctgtgg 562
            |||||||||||||||||||||
Sbjct: 2221 gtggaggggctgctgctgtgg 2241

---

>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 461   ctttagaggttccttccgtgtcatc 485
             ||||||||||||||||| |||||||
Sbjct: 80484 ctttagaggttccttccatgtcatc 80460

---

>gb|AF453325.2| Bos taurus pancreatic anionic trypsinogen (TRYP8) gene, complete cds;
             germline T-cell receptor beta DJC region genes, partial
             cds
          Length = 151480

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 245   aacctaatcagatgcaattat 265
             |||||||||||||||||||||
Sbjct: 66339 aacctaatcagatgcaattat 66319

---

>dbj|AK048033.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
            library, clone:C130031C11 product:hypothetical Fibrinogen
            beta and gamma chains C-terminal globular domain
            containing protein, full insert sequence
          Length = 3343

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 461  ctttagaggttccttccgtgtcatc 485
            ||||||||||||||||| |||||||
Sbjct: 3080 ctttagaggttccttccatgtcatc 3104

---

>gb|AY255620.1| Homo sapiens G protein-coupled receptor PGR24 mRNA, partial cds
          Length = 837

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 542 gtggaggggctgctgctgtgg 562
           |||||||||||||||||||||
Sbjct: 367 gtggaggggctgctgctgtgg 387

---

>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence
          Length = 178299

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 252    tcagatgcaattattattctt 272
              |||||||||||||||||||||
Sbjct: 108114 tcagatgcaattattattctt 108094

---

>ref|NM_182611.1| Homo sapiens G protein-coupled receptor 144 (GPR144), mRNA
          Length = 2892

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 542  gtggaggggctgctgctgtgg 562
            |||||||||||||||||||||
Sbjct: 2221 gtggaggggctgctgctgtgg 2241

---

>ref|NM_177839.2| Mus musculus tenascin N (Tnn), mRNA
          Length = 5773

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 461  ctttagaggttccttccgtgtcatc 485
            ||||||||||||||||| |||||||
Sbjct: 4931 ctttagaggttccttccatgtcatc 4955

---

>emb|AL137846.24| Human DNA sequence from clone RP11-101K10 on chromosome 9, complete
              sequence
          Length = 162839

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 542    gtggaggggctgctgctgtgg 562
              |||||||||||||||||||||
Sbjct: 142765 gtggaggggctgctgctgtgg 142785

---

>dbj|AB065601.1| Homo sapiens gene for seven transmembrane helix receptor, complete
            cds, isolate:CBRC7TM_164
          Length = 18512

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 542  gtggaggggctgctgctgtgg 562
            |||||||||||||||||||||
Sbjct: 3562 gtggaggggctgctgctgtgg 3582

---

>ref|XM_636459.1| Dictyostelium discoideum RNA binding protein (DDB0218189), partial
           mRNA
          Length = 2360

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 atcatcaccaaacacaccaa 197
           ||||||||||||||||||||
Sbjct: 905 atcatcaccaaacacaccaa 924

---

>ref|NM_001001876.1| Gallus gallus basement membrane-specific heparan sulfate proteoglycan
             core protein (HSPG), mRNA
          Length = 12255

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   gaggggctgctgctgtggca 564
             ||||||||||||||||||||
Sbjct: 11776 gaggggctgctgctgtggca 11795

---

>ref|XM_757515.1| Ustilago maydis 521 hypothetical protein (UM06461.1) partial mRNA
          Length = 4149

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 550 gctgctgctgtggcatttgc 569
           ||||||||||||||||||||
Sbjct: 736 gctgctgctgtggcatttgc 755

---

>ref|XM_862851.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 5 (LOC482670), mRNA
          Length = 6850

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  tcctcacagctttcttcttctccc 541
            |||||||||||||||||| |||||
Sbjct: 3628 tcctcacagctttcttctcctccc 3651

---

>ref|XM_862846.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 4 (LOC482670), mRNA
          Length = 7066

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  tcctcacagctttcttcttctccc 541
            |||||||||||||||||| |||||
Sbjct: 3847 tcctcacagctttcttctcctccc 3870

---

>ref|XM_862840.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 3 (LOC482670), mRNA
          Length = 7042

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  tcctcacagctttcttcttctccc 541
            |||||||||||||||||| |||||
Sbjct: 3823 tcctcacagctttcttctcctccc 3846

---

>ref|XM_539787.2| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 1 (LOC482670), mRNA
          Length = 7048

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  tcctcacagctttcttcttctccc 541
            |||||||||||||||||| |||||
Sbjct: 3835 tcctcacagctttcttctcctccc 3858

---

>ref|XM_848711.1| PREDICTED: Canis familiaris similar to Rap guanine nucleotide
            exchange factor 2 (PDZ domain containing guanine
            nucleotide exchange factor 1) (PDZ-GEF1) (RA-GEF),
            transcript variant 2 (LOC482670), mRNA
          Length = 7081

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 518  tcctcacagctttcttcttctccc 541
            |||||||||||||||||| |||||
Sbjct: 3859 tcctcacagctttcttctcctccc 3882

---

>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence
          Length = 195511

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    tattcttcctcttgttatgt 285
              ||||||||||||||||||||
Sbjct: 147313 tattcttcctcttgttatgt 147294

---

>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence
          Length = 211926

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   gaggggctgctgctgtggca 564
             ||||||||||||||||||||
Sbjct: 56555 gaggggctgctgctgtggca 56574

---

>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence
          Length = 191274

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   cttttttcctctcctcacag 526
             ||||||||||||||||||||
Sbjct: 49101 cttttttcctctcctcacag 49082

---

>emb|AL353624.8| Human DNA sequence from clone RP1-243N19 on chromosome 6, complete
             sequence
          Length = 23424

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   atatcaccatactcctcacc 359
             ||||||||||||||||||||
Sbjct: 17751 atatcaccatactcctcacc 17732

---

>emb|AL021408.1|HS523C21 Human DNA sequence from clone RP3-523C21 on chromosome 6q23.1-23.3
             Contains two novels genes, complete sequence
          Length = 146831

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   aatcagatgcaattattatt 269
             ||||||||||||||||||||
Sbjct: 60250 aatcagatgcaattattatt 60231

---

>gb|AC162180.2| Mus musculus BAC clone RP23-126K16 from chromosome 9, complete sequence
          Length = 226160

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 507    cttttttcctctcctcacag 526
              ||||||||||||||||||||
Sbjct: 211074 cttttttcctctcctcacag 211055

---

>emb|AJ584653.1| Gallus gallus mRNA for basement membrane-specific heparan sulfate
             proteoglycan core protein precursor (HSPG gene)
          Length = 12255

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   gaggggctgctgctgtggca 564
             ||||||||||||||||||||
Sbjct: 11776 gaggggctgctgctgtggca 11795

---

>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence
          Length = 188117

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 254   agatgcaattattattcttc 273
             ||||||||||||||||||||
Sbjct: 98067 agatgcaattattattcttc 98048

---

>emb|BX322588.8| Zebrafish DNA sequence from clone DKEYP-55C8 in linkage group 2, complete
              sequence
          Length = 192641

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    atgagtgcaagaaaaatcta 170
              ||||||||||||||||||||
Sbjct: 142089 atgagtgcaagaaaaatcta 142108

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 416      caccatcagctgattcagag 435
                ||||||||||||||||||||
Sbjct: 19319503 caccatcagctgattcagag 19319522

---

>emb|BX322607.6| Zebrafish DNA sequence from clone DKEYP-20F6 in linkage group 2, complete
              sequence
          Length = 167493

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    atgagtgcaagaaaaatcta 170
              ||||||||||||||||||||
Sbjct: 133455 atgagtgcaagaaaaatcta 133474

---

>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene,
             complete cds
          Length = 125625

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   agatgcaattattattcttc 273
             ||||||||||||||||||||
Sbjct: 81235 agatgcaattattattcttc 81254

---

>gb|AC120381.13| Mus musculus chromosome 5, clone RP24-266G11, complete sequence
          Length = 166871

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 522    cacagctttcttcttctccc 541
              ||||||||||||||||||||
Sbjct: 102902 cacagctttcttcttctccc 102883

---

>gb|AC130004.4| Homo sapiens 3 BAC RP11-237K2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118699

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   atcatcaccaaacacaccaa 197
             ||||||||||||||||||||
Sbjct: 91707 atcatcaccaaacacaccaa 91688

---

>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0438E12
          Length = 146851

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   caccatcagctgattcagag 435
             ||||||||||||||||||||
Sbjct: 24276 caccatcagctgattcagag 24295

---

>dbj|AB019231.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGO3
          Length = 43570

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   tctgcttttttcctctcctc 522
             ||||||||||||||||||||
Sbjct: 24988 tctgcttttttcctctcctc 25007

---

>gb|AF128626.1|AF128626 Dictyostelium discoideum RNA binding protein PufA (pufA) gene,
            complete cds
          Length = 2940

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 178  atcatcaccaaacacaccaa 197
            ||||||||||||||||||||
Sbjct: 1309 atcatcaccaaacacaccaa 1328

---

>dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115A04, full
            insert sequence
          Length = 1679

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 416  caccatcagctgattcagag 435
            ||||||||||||||||||||
Sbjct: 1015 caccatcagctgattcagag 1034

---

>gb|AC154756.2| Mus musculus BAC clone RP23-114J15 from 13, complete sequence
          Length = 189515

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 375    atcaacagtttcagcctgggagaa 398
              |||||||||||||||||| |||||
Sbjct: 125548 atcaacagtttcagcctgagagaa 125525

---

>emb|BX296516.3| Zebrafish DNA sequence from clone DKEY-219E20 in linkage group 20,
             complete sequence
          Length = 160555

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 521   tcacagctttcttcttctcc 540
             ||||||||||||||||||||
Sbjct: 13475 tcacagctttcttcttctcc 13494

---

>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 545    gaggggctgctgctgtggca 564
              ||||||||||||||||||||
Sbjct: 158786 gaggggctgctgctgtggca 158805

---

>emb|AL645483.7| Mouse DNA sequence from clone RP23-213O14 on chromosome 4, complete
             sequence
          Length = 87103

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 511   tttcctctcctcacagctttcttc 534
             ||||||||||| ||||||||||||
Sbjct: 72711 tttcctctcctgacagctttcttc 72688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,125,673
Number of Sequences: 3902068
Number of extensions: 6125673
Number of successful extensions: 125170
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124980
Number of HSP's gapped (non-prelim): 190
length of query: 627
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 604
effective length of database: 17,143,297,704
effective search space: 10354551813216
effective search space used: 10354551813216
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---