>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
             sequence
          Length = 121849

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 89    aactatgatcttcgttgcaatttacaacatgccgaagattgaaatgaacgac 140
             ||||||||||||| ||||||||||||| | |  |||||||||||||||||||
Sbjct: 95390 aactatgatcttctttgcaatttacaatacggtgaagattgaaatgaacgac 95339

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 89       aactatgatcttcgttgcaatttacaacatgccgaagattgaaatgaacgac 140
                ||||||||||||| ||||||||||||| | |  |||||||||||||||||||
Sbjct: 27083501 aactatgatcttctttgcaatttacaatacggtgaagattgaaatgaacgac 27083552

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 89       aactatgatcttcgttgcaatttacaacatgccgaagattgaaatgaacgac 140
                ||||||||||||| ||||||||||||| | |  |||||||||||||||||||
Sbjct: 27174824 aactatgatcttctttgcaatttacaatacggtgaagattgaaatgaacgac 27174875

>emb|AL953850.2| Human DNA sequence from clone RP11-346A18 on chromosome X, complete
             sequence
          Length = 84527

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 3     gtatgattttgatgtaaaaacagat 27
             ||||||| |||||||||||||||||
Sbjct: 36102 gtatgatattgatgtaaaaacagat 36126

>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
             complete sequence
          Length = 198600

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 11    ttgatgtaaaaacagatgataaac 34
             |||||||| |||||||||||||||
Sbjct: 83159 ttgatgtacaaacagatgataaac 83136

>gb|AC146720.23| Medicago truncatula clone mth2-17n5, complete sequence
          Length = 126477

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tcatggtacaccaaaaaata 62
             ||||||||||||||||||||
Sbjct: 22289 tcatggtacaccaaaaaata 22270

>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence
          Length = 133324

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ttgaaatgaacgacccaaat 146
             ||||||||||||||||||||
Sbjct: 60324 ttgaaatgaacgacccaaat 60343

>emb|AL353718.10| Human DNA sequence from clone RP11-472F14 on chromosome 9 Cotains the
             3' end of the gene for ubiquitin-like, containing PHD and
             RING finger domains 2 (URF2), a novel gene (PROO365), the
             3' end of the GLDC gene for glycine dehydrogenase
             (decarboxylating; glycine decarboxylase, glycine cleavage
             system protein P) and a pseudogene similar to part of RP42
             homolog, complete sequence
          Length = 146746

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 22    acagatgataaacatctagattca 45
             ||||| ||||||||||||||||||
Sbjct: 51649 acagaagataaacatctagattca 51626

>emb|AL138789.12| Human DNA sequence from clone RP4-694A7 on chromosome 1p31.2-32.1
             Contains the 3' end of the gene for cell cycle control
             protein SDP35 (SDP35), two novel genes and a thioredoxin
             (TXN) pseudogene, complete sequence
          Length = 96157

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   acatgccgaagattgaaatg 134
             ||||||||||||||||||||
Sbjct: 77890 acatgccgaagattgaaatg 77871

>emb|Y13117.1|PPINMP Paramecium primaurelia genes encoding cAMP-dependent protein kinase,
            peptidylprolyl isomerase and NMP kinase
          Length = 8033

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 10   tttgatgtaaaaacagatga 29
            ||||||||||||||||||||
Sbjct: 3794 tttgatgtaaaaacagatga 3775

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 4       tatgattttgatgtaaaaacagat 27
               ||||||||||||||||||| ||||
Sbjct: 2088444 tatgattttgatgtaaaaaaagat 2088421

>emb|BX119969.4| Mouse DNA sequence from clone RP23-58N9 on chromosome 13, complete
            sequence
          Length = 52119

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 8    attttgatgtaaaaacagatgataaaca 35
            |||| |||||||||| ||||||||||||
Sbjct: 6498 atttggatgtaaaaatagatgataaaca 6525

>gb|AC174351.5| Medicago truncatula clone mth2-7h5, complete sequence
          Length = 109873

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tcatggtacaccaaaaaata 62
             ||||||||||||||||||||
Sbjct: 24551 tcatggtacaccaaaaaata 24570

>gb|AC157493.3| Mus musculus BAC clone RP23-321K7 from chromosome 13, complete sequence
          Length = 184868

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 8     attttgatgtaaaaacagatgataaaca 35
             |||| |||||||||| ||||||||||||
Sbjct: 59765 atttggatgtaaaaatagatgataaaca 59738


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,404,812
Number of Sequences: 3902068
Number of extensions: 2404812
Number of successful extensions: 42239
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42186
Number of HSP's gapped (non-prelim): 53
length of query: 256
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 234
effective length of database: 17,147,199,772
effective search space: 4012444746648
effective search space used: 4012444746648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)