ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1p03 |
|---|---|
| Clone Library Name | barley_pub |
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase| Length = 882 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 3/116 (2%) Frame = -3 Query: 685 LTKFTKDADTEFDMIGQNAMKELD---QIGDQIMERLDSKMQSYEETAEMQRQEIEMNER 515 L K K+ +T+ + G ++++LD + ++I +R + + S +E QR+ + E Sbjct: 571 LEKELKELNTKLESFGFKSVEDLDSKLRELEEIYKRYLTLLNSKKELEITQREIAKAKET 630 Query: 514 VLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 + FE+ E E + K L ++K+ N EE K K + + + +E+A A K Sbjct: 631 LEMSFEELAEVEADIERIEKKLSQLKQKYNEEEYKKKREEKEELEKELARLEAQKK 686
>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift| suppressor 3) Length = 387 Score = 40.8 bits (94), Expect = 0.004 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 17/135 (12%) Frame = -3 Query: 694 SAYLTKFTKDADTEFDMIG-----------QNAMKEL---DQIGDQIMERLDSKMQSYEE 557 S Y+ KFT+ + + ++G N+MK+L D+ Q L S + + + Sbjct: 185 SPYVKKFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSK 244 Query: 556 TAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG---KVKKPQNNEEIKVKAKIEAQ 386 + E++ + E ERVL + ++ KN+ K+ K K+ + + +I K + + Sbjct: 245 SIELENKIAERTERVLTELVGTGDKVKNKNKKKKNKNAKKKFKEEEASAKIPKKKRNRGK 304 Query: 385 KVREIAEESAGSKTR 341 K RE E+S SKT+ Sbjct: 305 KKRENREKSTISKTK 319
>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)| Length = 1285 Score = 37.4 bits (85), Expect = 0.045 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%) Frame = -3 Query: 646 MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 485 M + KE D + ++++ L K Q EE ++R + EM + R ED + + Sbjct: 890 MTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRK 949 Query: 484 EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 359 EE+ M + K K K + ++E +++A++EAQ R+ EES Sbjct: 950 EEEERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEES 997
>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)| Length = 1265 Score = 37.4 bits (85), Expect = 0.045 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 12/123 (9%) Frame = -3 Query: 691 AYLTKFTKDADTEFDMIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMN 521 A + KFT T + KE D + + ++ L K Q EE ++R + EM Sbjct: 883 ALMAKFTSTMMTR-----EQIQKEYDALVKSSEDLLSALQKKKQQEEEAERLRRIQEEME 937 Query: 520 E---RVLEDFEDWIEEEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIA 368 + R ED E +EE+ M + K K K + ++E ++++++EAQ R+ Sbjct: 938 KERKRREEDEERRRKEEEERRMKLEMEPKRKQEEEERKKREDDEKRIQSEVEAQLARQRE 997 Query: 367 EES 359 EES Sbjct: 998 EES 1000
>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)| (Negative regulator of IL2) Length = 1124 Score = 35.4 bits (80), Expect = 0.17 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Frame = -3 Query: 637 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDF--EDWIEEEKNEGM 464 ++ +E D+ ++ E D +M+ +E E ++ + + E E+ E+ +EE +NEG Sbjct: 1026 ESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGE 1085 Query: 463 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 K+ G +K ++ + +A QKV E +E+ + KT Sbjct: 1086 EAKTEGLMK----DDRAESQASSLGQKVGESSEQVSEEKT 1121
>Y1739_STRPN (P67282) UPF0144 protein SP1739| Length = 534 Score = 35.4 bits (80), Expect = 0.17 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Frame = -3 Query: 679 KFTKDADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNE 518 K+ ++ D EF ++ +EL QI ++ ER D + S E+T E + Q I Sbjct: 82 KYREEVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRA 137 Query: 517 RVLEDFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 368 + L+ E+ +EE E+ + + +G + + + + I A+ E REIA Sbjct: 138 KNLDAREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
>Y1584_STRR6 (P67283) UPF0144 protein spr1584| Length = 534 Score = 35.4 bits (80), Expect = 0.17 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%) Frame = -3 Query: 679 KFTKDADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNE 518 K+ ++ D EF ++ +EL QI ++ ER D + S E+T E + Q I Sbjct: 82 KYREEVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRA 137 Query: 517 RVLEDFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 368 + L+ E+ +EE E+ + + +G + + + + I A+ E REIA Sbjct: 138 KNLDAREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
>TNNT_CAEEL (Q27371) Troponin T| Length = 405 Score = 35.4 bits (80), Expect = 0.17 Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 2/75 (2%) Frame = -3 Query: 580 SKMQSYEETAEMQRQEIEMNERVLEDFEDW--IEEEKNEGMFFKSLGKVKKPQNNEEIKV 407 +K+ YE+ +++++IE R L++ ++ E E++E F + + + + EE + Sbjct: 80 AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139 Query: 406 KAKIEAQKVREIAEE 362 KAK +A+K+R+ E+ Sbjct: 140 KAKADAEKIRKNEEK 154
>SAP1_SCHPO (P40847) Switch-activating protein 1| Length = 254 Score = 35.0 bits (79), Expect = 0.22 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%) Frame = -3 Query: 622 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 443 ELDQ+ D+ RL S++Q Y E + +++ + N+ + E + EE++N M + Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169 Query: 442 VKKP-QNNEE--IKVKAKIE 392 + K +NEE ++V AK++ Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)| Length = 1790 Score = 34.7 bits (78), Expect = 0.29 Identities = 25/125 (20%), Positives = 64/125 (51%), Gaps = 6/125 (4%) Frame = -3 Query: 691 AYLTKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSK------MQSYEETAEMQRQEI 530 +Y K T++ D + I ++ ++L+ + +Q+ +SK ++ EE + ++ E+ Sbjct: 1442 SYKDKITRN-DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAEL 1500 Query: 529 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 350 E ++ +++ E I E NE S+ ++K ++E+++ K + ++ + E + Sbjct: 1501 EKSKEMMKKLESTI--ESNETELKSSMETIRK--SDEKLEQSKKSAEEDIKNLQHEKSDL 1556 Query: 349 KTRMN 335 +R+N Sbjct: 1557 ISRIN 1561
>TIG_OCEIH (Q8CXB7) Trigger factor (TF)| Length = 428 Score = 34.7 bits (78), Expect = 0.29 Identities = 20/94 (21%), Positives = 47/94 (50%) Frame = -3 Query: 643 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 464 I + KEL ++ D+ + +D +++S +E + +R E+E N++ +E +K E + Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL 292 Query: 463 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 362 ++K +N E+ + + +V ++ E Sbjct: 293 -------IQKASDNVEVDIPEAMVDTEVNQMVRE 319
>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA| reducing factor 3B) (Up-frameshift suppressor 3 homolog B) (hUpf3B) (hUpf3p-X) Length = 483 Score = 34.7 bits (78), Expect = 0.29 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%) Frame = -3 Query: 679 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-MQRQEIEMNERVLED 503 K T +T + I + + + ++ L +K + EE E +R+EIE + E+ Sbjct: 173 KMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEE 232 Query: 502 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 383 W EEEK + + L K+ + +++K + KI+ + Sbjct: 233 RRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272
>FAR10_YEAST (Q06001) Factor arrest protein 10| Length = 478 Score = 33.9 bits (76), Expect = 0.49 Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N L+ ++E+ D ++ + ++R+ E+++E + +++ + + MFFK Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369 Query: 454 SLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSK 347 +VKK +NNE+ K ++ +IE K R E S+ Sbjct: 370 KSFEVKKRRNNEKQKSMEREIEDLKTRLEVERYKNSQ 406
>TIG_HELHP (Q7VIN8) Trigger factor (TF)| Length = 442 Score = 33.9 bits (76), Expect = 0.49 Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 20/145 (13%) Frame = -3 Query: 688 YLTKFTKDADTEFDM-IGQNAMKELDQIGDQIMERL---DSKMQS----YEETAEM-QRQ 536 Y K + FD+ + + KEL +I D+ + + +S +QS +E EM Q+ Sbjct: 225 YQAKHLAGKEASFDVTLHKILQKELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKT 284 Query: 535 EI---EMNERVLE--------DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 389 EI E+ E+++E D D I E++ + +F +L ++ KP+ ++IK + EA Sbjct: 285 EIYNKELKEKLVEILLKNISFDLPDLIVEQEMDILFRNALSQL-KPEEFDKIK-NNQDEA 342 Query: 388 QKVREIAEESAGSKTRMNIYLALMA 314 +K RE ++ A ++ + +A Sbjct: 343 KKQRETHKDEARKSVQITFIMDALA 367
>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)| Length = 413 Score = 33.9 bits (76), Expect = 0.49 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = -3 Query: 604 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 425 D++ E+++ + YE+ ++ +E EM + E E +EEK E + ++KK + Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKKKK 373 Query: 424 NEEIKVKA-KIEAQKVREIAEE 362 E+ + K KI+ K RE +E Sbjct: 374 KEKQEEKGKKIKEGKKRERKQE 395
>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat protein;| Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 1675 Score = 33.9 bits (76), Expect = 0.49 Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 1/113 (0%) Frame = -3 Query: 676 FTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE 497 +++ D EF+ +G ++LDQ + E + +E ++ +EI + V E E Sbjct: 374 YSEYEDLEFEKLGLTGWEDLDQDSIETEE-----ITEWENPNQVLHREIRAYKSVSEQIE 428 Query: 496 DWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTR 341 D E K G + +L +++ + ++I+ +A+ + EIA+ S S+ R Sbjct: 429 DIFGELLKEHGNYDMALKNLEEKYDLDKIE-----KAKSIEEIAKSSTSSEIR 476
>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)| Length = 778 Score = 33.9 bits (76), Expect = 0.49 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%) Frame = -3 Query: 580 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 416 SK + EET E++ +EIE V E+ ++ EEEK + F K + +VK+ +EE Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560 Query: 415 IKVKAKIEAQK--VREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVA 248 K+K +I+ K ++ I + + ++ A + + L + + V + V RK A Sbjct: 561 DKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTLEVGDYVLSDRVVVERKTA 618
>CING_MOUSE (P59242) Cingulin| Length = 1191 Score = 33.5 bits (75), Expect = 0.64 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Frame = -3 Query: 625 KELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 KEL+QIGD +++L ++M+ Y+E A R+E+ +R +D+ E EKN G + Sbjct: 844 KELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS--EAEKNSGGLSR 898 Query: 454 SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 347 ++++ + ++ ++ AQ+++ + +E+ K Sbjct: 899 LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)| Length = 382 Score = 33.5 bits (75), Expect = 0.64 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Frame = -3 Query: 667 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 506 DA EF+ I + +L I D+ +++ ++ + E+ + + +Q ++N E VL+ Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315 Query: 505 DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 413 DF ++IEE + + + + K+ K +N EEI Sbjct: 316 DFNNYIEEIRTKEL--EKAIKLSKTKNPEEI 344
>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M| phase phosphoprotein 10) Length = 681 Score = 33.1 bits (74), Expect = 0.84 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%) Frame = -3 Query: 670 KDADTEFDMI-----------GQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEM 524 +D+D +FD+ GQ +E + D+ + S+M++Y E E + + + Sbjct: 169 EDSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKL--SEMEAYLENIEKEEERKDD 226 Query: 523 NERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 404 N+ ED FED I+ +++EG F S K+K +++ +K K Sbjct: 227 NDEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLKYK 267
>TIG_STAES (Q8CNY4) Trigger factor (TF)| Length = 433 Score = 33.1 bits (74), Expect = 0.84 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = -3 Query: 667 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 488 D T + + GQN + DQ+ D +R+ + + TA + IE+++ ED + Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381 Query: 487 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 356 E EK F S+ +K N +I VK + QKV ++ ++A Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
>TIG_STAEQ (Q5HNM8) Trigger factor (TF)| Length = 433 Score = 33.1 bits (74), Expect = 0.84 Identities = 29/104 (27%), Positives = 50/104 (48%) Frame = -3 Query: 667 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 488 D T + + GQN + DQ+ D +R+ + + TA + IE+++ ED + Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381 Query: 487 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 356 E EK F S+ +K N +I VK + QKV ++ ++A Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
>Y164_METJA (Q57628) Hypothetical protein MJ0164| Length = 395 Score = 33.1 bits (74), Expect = 0.84 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 20/138 (14%) Frame = -3 Query: 685 LTKFTKDADTEFDMIGQNA------------MKELDQIGDQIMERLDS--------KMQS 566 L + KD +T D+ N MK LD+ ++ E+ DS + Sbjct: 208 LEEMLKDENTVIDVYEYNEKKTHVILELYPQMKILDENENKSSEKADSLESEGSITTAEE 267 Query: 565 YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQ 386 EE + + R+E+ + E E+WIE L V +P + E ++K KIE++ Sbjct: 268 IEEESTVSREELLKKLGIKEPDENWIE---------TILEDVFRPSDEELEELKEKIESE 318 Query: 385 KVREIAEESAGSKTRMNI 332 V ++ S +N+ Sbjct: 319 IVNKVKRMEGVSDVLVNL 336
>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1404 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/49 (26%), Positives = 31/49 (63%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 +E +K EGM F + +VK+ +N +++ AK++ ++ ++ E+ G ++ Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase| Length = 993 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/105 (23%), Positives = 51/105 (48%) Frame = -3 Query: 604 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 425 ++ E+++ +SYEET E+ +LE+ E ++ E +E K +KK +N Sbjct: 161 EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEK-LKNEVSESEILKE-EILKKYEN 218 Query: 424 NEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIAN 290 E++K++ E ++ E E+ K + ++ + + L I N Sbjct: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQN 263
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.7 bits (73), Expect = 1.1 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -3 Query: 643 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 464 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQI---KYEGY 550 Query: 463 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 359 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMESKKIPVDIDYDAISSLASEA 585
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)| Length = 705 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = -3 Query: 586 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 407 LD++++ +E E +RQE E ER + E IEE + +K Q+ E + Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246 Query: 406 KAKIEAQKV----REIAEESAGSKTRMNI 332 K +++ Q + R+ EES K+ + Sbjct: 247 KRRLKEQSIFGDQRDEEEESQMKKSESEV 275
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein| (Chromosome-associated protein E) (hCAP-E) (XCAP-E homolog) Length = 1197 Score = 32.7 bits (73), Expect = 1.1 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 16/118 (13%) Frame = -3 Query: 637 QNAMKELDQ-----IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDW 491 Q M+E++ I Q + D+K++S EE EMQ ++E+ N++ ++ Sbjct: 221 QKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHE 280 Query: 490 IEE-----EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 332 IEE +K G+ +SL K ++ + +K EES + N+ Sbjct: 281 IEELEKRKDKETGVILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNM 338
>RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.7 bits (73), Expect = 1.1 Identities = 13/53 (24%), Positives = 33/53 (62%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 332 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G +++ ++ Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDRGLRSKASL 568
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -3 Query: 643 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 464 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550 Query: 463 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 359 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 629 Score = 32.3 bits (72), Expect = 1.4 Identities = 25/95 (26%), Positives = 45/95 (47%) Frame = -3 Query: 643 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 464 IG + +K+ G + + L +YE + E+E+++ V E E I K EG Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550 Query: 463 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 359 KSL +V++ + E K+ I+ + +A E+ Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)| Length = 706 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%) Frame = -3 Query: 586 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 407 LD++++ +E E +RQE E ER + E IEE + +K Q+ E + Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246 Query: 406 KAKIEAQKV----REIAEESAGSKTRMNI 332 K +++ Q + R+ EES K+ + Sbjct: 247 KRRLKDQSIFGDQRDEEEESQMKKSESEV 275
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 32.3 bits (72), Expect = 1.4 Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 22/129 (17%) Frame = -3 Query: 679 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEET---------AEMQRQEIE 527 K KD D++ D ++ K+L + +E L +K ++ EE AE + + ++ Sbjct: 117 KSRKDRDSKKDEEDEHGDKKL-KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALK 175 Query: 526 MNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE-----------AQ 386 ++ +E+ + +EEE+ + F+ LG+ ++ PQ E + + ++E Q Sbjct: 176 RRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQ 235 Query: 385 KVREIAEES 359 K+RE ++S Sbjct: 236 KIREEKDKS 244
>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHRNPGVVTGSAVGCDPDLFWS 1963 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2205 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)| (Golgi-associated microtubule-binding protein 210) (GMAP-210) (Trip230) (Clonal evolution related gene on chromosome 14) Length = 1979 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/92 (21%), Positives = 43/92 (46%) Frame = -3 Query: 637 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 458 QN +E+D ++ ++ Q E + R+E+ E +E+ E+ + ++ G+ Sbjct: 223 QNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIE 281 Query: 457 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 362 L K+ + Q ++ K+E+ K E E+ Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTKKMEQLED 313
>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2| Length = 590 Score = 32.0 bits (71), Expect = 1.9 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%) Frame = -3 Query: 625 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 446 K+ D+I ++ E +++ + ++ E + QE E + + E+ E+E+NE K L Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552 Query: 445 KVKKPQNNEEIKVKAKIEAQK------VREIAEE 362 K +K N+ K K + + QK V E+AE+ Sbjct: 553 KTQK--KNQSKKAKKQQQKQKQNETNDVEEVAED 584
>POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2206 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1965 KIPVLMEEKLFAFDYTGYDASLSP 1988
>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445| Length = 368 Score = 32.0 bits (71), Expect = 1.9 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%) Frame = -3 Query: 544 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 389 ++Q E N+R++ + + D+++ +K F S+G++K+P N +++ K +++A Sbjct: 73 EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127
>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2213 Score = 32.0 bits (71), Expect = 1.9 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1912 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1971 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1972 KIPVLMEEKLFAFDYTGYDASLSP 1995
>RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1407 Score = 32.0 bits (71), Expect = 1.9 Identities = 16/71 (22%), Positives = 39/71 (54%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 311 +E +K EGM F + ++K+ +N +++ AK++ ++ EI + G + + + +I Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDQGLRNKAS------SI 569 Query: 310 LGLTIANAVFA 278 + T+ A+ + Sbjct: 570 VDTTVGRALLS 580
>POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2204 Score = 31.6 bits (70), Expect = 2.4 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964 Query: 256 KVAAL 242 K+ L Sbjct: 1965 KIPVL 1969
>CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11| Length = 399 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 1/102 (0%) Frame = -3 Query: 637 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 458 ++ +E + D M+ + +Q ++ A+ ++Q+ E R + + D++ + + E Sbjct: 182 ESMQREYREDLDLNMKLVGRALQDLQDEADKKKQKREEMGREQKIYNDYLMQRREEE--- 238 Query: 457 KSLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSKTRMN 335 K ++ + N ++ +KAK A+K RE+A + A K MN Sbjct: 239 ----KAQEKELNRLLEDIKAKKLAEKDRELALQRAARKQLMN 276
>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat| protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein P2A); Core protein P2B; Core protein P2C; Core protein P3A; Genome Length = 2208 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Frame = -3 Query: 421 EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 257 +E++ K K+E K R I S M N+Y A G+ +AV P++ W Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966 Query: 256 KVAALGLIFIGLVAQVTYEQDISP 185 K+ L + Y+ +SP Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)| (MyT1-L) Length = 1186 Score = 31.6 bits (70), Expect = 2.4 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 18/131 (13%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 494 T+D D + + G+ ++ D+ GD+ E + + EE E + E E V ++ E+ Sbjct: 96 TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155 Query: 493 WIEEEKNEG-----------MFFKSLGKVKKPQNN-------EEIKVKAKIEAQKVREIA 368 EEE+ E + + +K NN +E+ K+ + K+ E A Sbjct: 156 EEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNSDEYDNYDELVAKSLLNLGKIAEDA 215 Query: 367 EESAGSKTRMN 335 A +++ MN Sbjct: 216 AYRARTESEMN 226
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)| Length = 4684 Score = 31.6 bits (70), Expect = 2.4 Identities = 37/156 (23%), Positives = 66/156 (42%) Frame = -3 Query: 655 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 476 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1849 EQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK-------VRAEM 1901 Query: 475 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTI 296 + K+ + + +E+ K + + EA + RE+AEE+A + LA A + Sbjct: 1902 EVLLASKAKAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRA-----LAEEAKRQRQL 1956 Query: 295 ANAVFATPEVEWRKVAALGLIFIGLVAQVTYEQDIS 188 A A E +V A L IG ++ E +I+ Sbjct: 1957 AEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIA 1992
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non| muscle) Length = 2116 Score = 31.6 bits (70), Expect = 2.4 Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%) Frame = -3 Query: 679 KFTKDA-DTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLED 503 K+ KD DT++ + + A K +IG +E +++S E + + + + +++ LE Sbjct: 1815 KYEKDLKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEG 1874 Query: 502 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 D + + + GK+K E+ ++ ++E ++RE EE+ SK+ Sbjct: 1875 EIDNLRAQ------IEDEGKIKMRLEKEKRALEGELE--ELRETVEEAEDSKS 1919
>FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1)| Length = 428 Score = 31.6 bits (70), Expect = 2.4 Identities = 26/109 (23%), Positives = 57/109 (52%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 494 T+ AD++ ++ Q A + + +L ++++ +E +++ +EIE+ E V + Sbjct: 210 TRMADSKRELELQKAAFNQEVNTKKAESQLAYELEAAKEQQKIRLEEIEI-EVVQRKKQI 268 Query: 493 WIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 IEE++ E + + VK+P E K++ E QK++++ A S+ Sbjct: 269 SIEEKEIERTEKELIATVKRPAEAEAYKMQQLAEGQKLKKVLIAQAESE 317
>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDAVDGKRT 565
>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1405 Score = 31.2 bits (69), Expect = 3.2 Identities = 13/49 (26%), Positives = 28/49 (57%) Frame = -3 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 344 +E +K EGM F + +VK+ +N +++ AK++ + + + G +T Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)| Length = 1683 Score = 31.2 bits (69), Expect = 3.2 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = -3 Query: 625 KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 482 K LDQIG+ + SK + AE++RQ+I EM +R L + WI + Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489
>YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4| Length = 267 Score = 31.2 bits (69), Expect = 3.2 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = -3 Query: 340 MNIYLALMAILGLTIANAVFATPEVEWRKVAALGLIFIGLVAQVTYE 200 +N L L+A+LG+ + P + W+ V L L+F+G ++ Y+ Sbjct: 76 VNFSLVLLALLGINSKVSSMILPALVWKCVLLLFLLFLGCISVDAYQ 122
>FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA| Length = 1302 Score = 31.2 bits (69), Expect = 3.2 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 503 TK AD F G A+ ELD GD I+ D+ QS ++ + I + NE R LE+ Sbjct: 353 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEE 411
>ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit| alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase carboxyltransferase subunit alpha) (ACCase subunit alpha) Length = 321 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -3 Query: 694 SAYLTKFTKDADTEFDMIGQNA--MKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN 521 ++ L K + A T +++G A +KEL+ I + + E L + Y+E A+ +Q Sbjct: 236 ASILWKSAEKASTAAEVMGLTASRLKELELIDNIVTEPLGGAHRQYDEMAQALKQ----- 290 Query: 520 ERVLEDFED 494 R+L D ED Sbjct: 291 -RILSDLED 298
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 31.2 bits (69), Expect = 3.2 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%) Frame = -3 Query: 601 QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEEEKNEGMFFKSLGKVKK 434 Q +E L ++Q EE AE+Q E+E N E +ED I+E F++ K K+ Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE-------FEAALKAKE 1867 Query: 433 PQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEW 260 E +I+A R+ A + + + A+ +A A A PE++W Sbjct: 1868 ATIAER---NLEIDALNQRKAAHSAELEAVLLALARIRRALEQQPLA-AGAAPPELQW 1921
>Y124_METJA (Q57588) Hypothetical protein MJ0124| Length = 1075 Score = 31.2 bits (69), Expect = 3.2 Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 4/85 (4%) Frame = -3 Query: 616 DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGMFFKSL 449 + IG + ++R + + + + +Q + + +LE E DWI + ++ ++ ++ Sbjct: 895 ENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAI 954 Query: 448 GKVKKPQNNEEIKVKAKIEAQKVRE 374 + + +NN + K+K K ++++E Sbjct: 955 KNLMELKNNYDKKIKGKSSIERIKE 979
>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC| 2.7.11.17) (CAM kinase-GR) (CaMK IV) Length = 469 Score = 30.8 bits (68), Expect = 4.2 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDS----KMQSYEETAEMQRQEIEMNERVLE 506 T+DA D++G+ M+E DQ DQ+ + K+QS E + +E E + V + Sbjct: 358 TQDAKDSTDLLGKK-MQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSSMVPQ 416 Query: 505 DFEDWIEEEKNE 470 D ED +E + E Sbjct: 417 DPEDELETDDPE 428
>IF2_AQUAE (O67825) Translation initiation factor IF-2| Length = 805 Score = 30.8 bits (68), Expect = 4.2 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNER---VLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 425 +++ + K + EE E ++ +I+M+++ ++ E +E+EK + + + +K + Sbjct: 162 VKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKK----QEKREKEKKKK 217 Query: 424 NEEIKVKAKIEAQKVREIAE 365 EE+K+ E VRE+AE Sbjct: 218 EEEVKIIYIPEVITVRELAE 237 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%) Frame = -3 Query: 604 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 425 +++++ + K + +E +++++ E RV+E ++ +EEK E + K+K + Sbjct: 129 EELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKK 188 Query: 424 NEEI--KVKAKIEAQKVREIAEESAGSK 347 EI K++ +E +K ++ E K Sbjct: 189 EREIMRKLEHAVEKEKKKQEKREKEKKK 216
>DMD_PIG (Q5GN48) Dystrophin| Length = 3674 Score = 30.8 bits (68), Expect = 4.2 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 25/127 (19%) Frame = -3 Query: 670 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 521 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1804 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1863 Query: 520 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-------PQNNEEIK------VKAKIEAQ 386 ++ LE W + ++ K L ++K PQ+ ++IK K K E Sbjct: 1864 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPQDEKKIKEIDRELQKKKEELD 1923 Query: 385 KVREIAE 365 VR AE Sbjct: 1924 AVRRQAE 1930
>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)| (AH antigen) Length = 3210 Score = 30.8 bits (68), Expect = 4.2 Identities = 20/92 (21%), Positives = 41/92 (44%) Frame = -3 Query: 637 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 458 Q + ELD++ L+ K Q+ + E + +EM + L++ + + + Sbjct: 2319 QGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEIM 2378 Query: 457 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 362 K+ + P EE +++ IE + R A+E Sbjct: 2379 KATEQSLDPPIEEEHQLRNSIEKLRARLEADE 2410
>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2| Length = 886 Score = 30.8 bits (68), Expect = 4.2 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -3 Query: 589 RLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 410 RL+ + ++ +E AE++ ++ E + ED + +EE + K K+ + K Sbjct: 118 RLEEQQKAAQEAAELKAKQ-EAERKAKEDADRKAKEEAKRKADAERKAKQKQMTPEQSAK 176 Query: 409 V-KAKIEAQKVREIAEESAGSK 347 K +IEA+++++ AEE+A K Sbjct: 177 SEKDRIEAERLQKEAEEAALKK 198
>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa| Golgi complex-associated protein) (GCP372) Length = 3259 Score = 30.8 bits (68), Expect = 4.2 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 9/121 (7%) Frame = -3 Query: 700 ERSAYLTKFTKDADTEFDMIGQNAMKELDQ----IGDQIMERLDSKMQSYEETAEMQR-- 539 E + +TK + A+ E D + + M +L + IG+ + D+++++ +EM+ Sbjct: 1903 EELSRVTKLKETAEEEKDDLEERLMNQLAELNGSIGNYCQDVTDAQIKNELLESEMKNLK 1962 Query: 538 ---QEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 368 E+E ++ L + +E E + K G K+P N K ++ +K +E+ Sbjct: 1963 KCVSELEEEKQQLVKEKTKVESEIRKEYLEKIQGAQKEPGNKSHAKELQELLKEKQQEVK 2022 Query: 367 E 365 + Sbjct: 2023 Q 2023
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 30.8 bits (68), Expect = 4.2 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 29/136 (21%) Frame = -3 Query: 679 KFTKDADTEFDMIGQNAMKELDQIGDQ-------IMERLDSKMQSYEET---------AE 548 K KD D++ D E D+ GD+ +E L +K ++ EE AE Sbjct: 117 KSRKDRDSKKD--------EEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAE 168 Query: 547 MQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE------ 392 + + ++ ++ +E+ + +EEE+ + F+ LG+ ++ PQ E + + ++E Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGN 228 Query: 391 -----AQKVREIAEES 359 QK+RE ++S Sbjct: 229 EDEEGRQKIREEKDKS 244
>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 681 Score = 30.4 bits (67), Expect = 5.4 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%) Frame = -3 Query: 577 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 404 K+++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192 Query: 403 AKI 395 +I Sbjct: 193 KQI 195
>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens| fiber cell beaded-filament structural protein CP 115) (CP115) (Lens intermediate filament-like heavy) (LIFL-H) Length = 665 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -3 Query: 619 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 506 L+Q E D ++Q Y E E R+EIE ERVLE Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286
>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase| Length = 1070 Score = 30.4 bits (67), Expect = 5.4 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%) Frame = -3 Query: 631 AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGM 464 A+KE + GD + LDS+MQS + EIE E+ + D D+ E++ Sbjct: 438 ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIEALEKEIRDNSKAVLDFQEQKSEVFA 496 Query: 463 FFKSLGKVKKPQNNEE 416 K+LG ++ N E Sbjct: 497 GLKALGFTEEQLENLE 512
>IOVO_TADRA (P68157) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_SARME (P68156) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_NEOJU (P68155) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_MERCU (P68154) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_LOPSP (P68153) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_DRONO (P05560) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -2 Query: 338 EYLPCTHGDTRSYNRKCRLCN 276 EY+P D+++YN KC CN Sbjct: 17 EYMPLCGSDSKTYNNKCDFCN 37
>IOVO_CYACY (P68152) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_COSCO (P05571) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_CHLPI (P68151) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANAPL (P68150) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ANACA (P68149) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_ALOAE (P68148) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXSP (P68145) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>IOVO_AIXGA (P68144) Ovomucoid (Fragment)| Length = 54 Score = 30.4 bits (67), Expect = 5.4 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY+P D ++Y KC CN Sbjct: 5 DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
>K2C4_MOUSE (P07744) Keratin, type II cytoskeletal 4 (Cytokeratin-4) (CK-4)| (Keratin-4) (K4) (Cytoskeletal 57 kDa keratin) Length = 525 Score = 30.4 bits (67), Expect = 5.4 Identities = 27/132 (20%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Frame = -3 Query: 700 ERSAYLTKFTKDADTEFDMIGQNAM----KELDQIGDQIMERLDSKMQSYEETAEMQRQE 533 ++ +L + K +T+++++ Q K LD + + L + + + E Sbjct: 162 DKVRFLEQQNKVLETKWNLLQQQTTTTSPKSLDPFFETYINALRKNLDTLSNDKGRLQSE 221 Query: 532 IEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAG 353 ++M + +EDF+ EEE N+ ++ V K + +K ++EA K+ + +E Sbjct: 222 LKMMQDSVEDFKTKYEEEINKRTAAENDFVVLKKDVDAAYMIKVELEA-KMESLKDEINF 280 Query: 352 SKTRMNIYLALM 317 ++ LA M Sbjct: 281 TRVLYEAELAQM 292
>CE290_BOVIN (Q9TU23) Centrosomal protein Cep290| Length = 1453 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 +E L+ + S +E E +E+E+ + L E E+E G ++ K KK N E Sbjct: 72 LEHLECENVSLKEQMESINKELEITKEKLHTIEQAWEQETKLGN-ESNMDKAKKSVTNSE 130 Query: 415 I-KVKAKIEAQKVREIAE 365 I + KI +++E+ E Sbjct: 131 IVSISKKITMLEMKELNE 148
>ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14)| Length = 159 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/71 (30%), Positives = 33/71 (46%) Frame = -3 Query: 577 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 398 K + E A + + E E N +E+ K +G KVK + +EEI +AK Sbjct: 47 KADAQNEEARLLKVESEKN----------LEDSKLQGKTIVENYKVKAEKVSEEITAEAK 96 Query: 397 IEAQKVREIAE 365 EAQ + E A+ Sbjct: 97 TEAQNILERAK 107
>COT1_NEUCR (P38679) Serine/threonine-protein kinase cot-1 (EC 2.7.11.1)| (Colonial temperature-sensitive 1) Length = 598 Score = 30.4 bits (67), Expect = 5.4 Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%) Frame = -3 Query: 682 TKFTKDADTEFDMIGQNA---MKELDQIG-DQIMERLDSKMQSYEETAEMQRQEIEMNER 515 T+F + D G NA K+ Q+ D + + + + +EM+++ E N+ Sbjct: 125 TEFAPAPERNPDKYGPNANNNQKKCSQLASDFFKDSVKRARERNQRQSEMEQKLGETNDA 184 Query: 514 VLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAG 353 + W + EG + + L KP+N + IK+ K +V+ + +++ G Sbjct: 185 RRRE-SIWSTAGRKEGQYLRFLRTKDKPENYQTIKIIGKGAFGEVKLVQKKADG 237
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)| Length = 648 Score = 30.4 bits (67), Expect = 5.4 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Frame = -3 Query: 586 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 407 LD +++ +E E +RQE E ER + E IEE + +K Q E + Sbjct: 199 LDERLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQTLEAEEA 246 Query: 406 KAKIEAQKV----REIAEESAGSKTRMNI 332 K +++ Q + R+ EE+ K+ + Sbjct: 247 KRRLKEQSIFGDHRDEEEETHMKKSESEV 275
>SPC97_YEAST (P38863) Spindle pole body component SPC97| Length = 823 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Frame = -3 Query: 688 YLTKFTKDADTEFDMIGQNAMKELDQIGDQ--IMERLDSKMQSYEETAEMQRQEIEMNER 515 YL + + +F+ + +++EL+QI ++ + ++++ YEE + +E N+ Sbjct: 150 YLKTLVERLERDFNKVPNFSIRELEQIINETEVNKQMELLYNIYEEIFR-EIEERRTNQS 208 Query: 514 VLEDFEDWIEEEKNE 470 EDF ++++ KNE Sbjct: 209 SQEDFNNFMDSMKNE 223
>DMD_CANFA (O97592) Dystrophin| Length = 3680 Score = 30.4 bits (67), Expect = 5.4 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Frame = -3 Query: 670 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 521 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1810 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1869 Query: 520 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 374 ++ LE W + ++ K L ++K P+ +E K+K E QK +E Sbjct: 1870 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1926
>IE68_SHV21 (Q01042) Immediate-early protein| Length = 407 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/67 (29%), Positives = 32/67 (47%) Frame = -3 Query: 562 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 383 EE E + +E E E E+ E+ EEE+ E + ++ EE + + EA++ Sbjct: 94 EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEE 153 Query: 382 VREIAEE 362 E AEE Sbjct: 154 AEEEAEE 160
>RNF17_HUMAN (Q9BXT8) RING finger protein 17| Length = 653 Score = 30.4 bits (67), Expect = 5.4 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 12/112 (10%) Frame = -3 Query: 682 TKFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA-------EMQRQEIEM 524 T + A T+ ++ +A+ ++I E L++ S+E+ + MQ+Q IE Sbjct: 123 TGLERSASTDKTLLNSSAVMLDTNTAEEIDEALNTAHHSFEQLSIAGKALEHMQKQTIEE 182 Query: 523 NERVLEDFEDWIEE-----EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 383 ERV+E E ++ + + + + + IK K+ IE +K Sbjct: 183 RERVIEVVEKQFDQLLAFFDSRKKNLCEEFARTTDDYLSNLIKAKSYIEEKK 234
>IOVO_GALCH (P68379) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>IOVO_FULAT (P68378) Ovomucoid (Fragment)| Length = 54 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G S EY+P D ++Y+ KC CN Sbjct: 5 DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3| (ERIC-1) Length = 838 Score = 30.0 bits (66), Expect = 7.1 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Frame = -3 Query: 637 QNAMKELDQIGDQI--MER----LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 476 Q +KE DQ+ + ME+ L + + +E E R+ E ++ +ED+ I +E Sbjct: 702 QKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEG 761 Query: 475 NEGMFFKSLGKVKKPQNNEEI-KVKAKIEAQKVREIAEESAGSKTRMNI 332 K+ + K NEEI +V++K +A+ +A +++ K +M I Sbjct: 762 QRYQALKAHAEEKLQLANEEIAQVRSKAQAE---ALALQASLRKEQMRI 807
>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)| Length = 302 Score = 30.0 bits (66), Expect = 7.1 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 5/116 (4%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 494 T++A E Q A EL D + S Q ++ A +E + E + + Sbjct: 43 TEEATDEHHSRTQQAKDELKSKADHAANEVKSNTQQAKDRASEVGKEAK---EYTESWTE 99 Query: 493 WIEEEKNEGMFFKS----LGKVKKPQNN-EEIKVKAKIEAQKVREIAEESAGSKTR 341 W +E+ +EG+ FK G V+K ++ + K K + Q + A E + K + Sbjct: 100 WAKEKISEGLGFKQDDDPKGSVEKAFDSVADTATKTKDKLQDMASGAGEYSAGKAK 155
>CING_XENLA (Q9PTD7) Cingulin| Length = 1360 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Frame = -3 Query: 613 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKV 440 Q+ D++ +R+ + A MQR EIE+ E E ++ E++KNE + S + Sbjct: 451 QLDDEMKQRMKLETSQGRPKAGMQRLEIELEESKEECSRLKELYEKKKNE-LSAMSQELM 509 Query: 439 KKPQNNEEIKVKAKIEAQKVREIAEE 362 + E+++ K + K+ + EE Sbjct: 510 EVRMGKEQVETKLRTMEDKLMDSKEE 535
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic| acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome P450 73) Length = 506 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = -3 Query: 529 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK--VKAKIEAQKVREIAEES 359 E+ E L+ F+D+ +E+ K LG K NN E+K + ++AQ+ EI E++ Sbjct: 244 EVKETRLKLFKDYFVDER------KKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDN 296
>ENGA_CHRVO (Q7NS92) GTP-binding protein engA| Length = 469 Score = 30.0 bits (66), Expect = 7.1 Identities = 24/68 (35%), Positives = 37/68 (54%) Frame = -3 Query: 529 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 350 E+ E VLE F D +EEE + F +G +P + V A + ++V IA + AG+ Sbjct: 154 ELMELVLEGFPDEVEEEDSRHPKFAVIG---RPNVGKSTLVNAILGEERV--IAFDQAGT 208 Query: 349 KTRMNIYL 326 TR +IY+ Sbjct: 209 -TRDSIYI 215
>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1191 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 415 IKVKAKIEAQKVREIAEESAGS 350 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>DMD_HUMAN (P11532) Dystrophin| Length = 3685 Score = 30.0 bits (66), Expect = 7.1 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%) Frame = -3 Query: 670 KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 521 K+ D DM N +KEL Q GD + +R+ + + E + Q + + N Sbjct: 1808 KEEDFNKDMNEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1867 Query: 520 --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 374 ++ LE W + ++ K L ++K P+ +E K+K E QK +E Sbjct: 1868 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1924
>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:| Caspase-8 subunit p18; Caspase-8 subunit p10] Length = 480 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/45 (28%), Positives = 26/45 (57%) Frame = -3 Query: 646 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 512 M+ +N ++ L I DQ+ + L K++ YE ++ +R +E E + Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195
>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC| 2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin) Length = 474 Score = 30.0 bits (66), Expect = 7.1 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%) Frame = -3 Query: 613 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMF 461 Q G + L++KMQ+ +ET ++Q +E+E E V E+ E+ EEE+ M Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRMV 418 Query: 460 FKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 350 PQ E+ + + + Q+++ +EE+ S Sbjct: 419 ---------PQEPED---RLETDDQEMKRNSEETLKS 443
>CE290_HUMAN (O15078) Centrosomal protein Cep290| Length = 1539 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 +E L+ + S +E E +E+E+ + L E E+E G S+ K KK N + Sbjct: 53 LEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGN-ESSMDKAKKSITNSD 111 Query: 415 I-KVKAKIEAQKVREIAE 365 I + KI +++E+ E Sbjct: 112 IVSISKKITMLEMKELNE 129
>FRPC_NEIMC (P55127) Iron-regulated protein frpC| Length = 1829 Score = 30.0 bits (66), Expect = 7.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 503 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
>FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC| Length = 1829 Score = 30.0 bits (66), Expect = 7.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 503 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
>FRPA_NEIMC (P55126) Iron-regulated protein frpA| Length = 1115 Score = 30.0 bits (66), Expect = 7.1 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%) Frame = -3 Query: 673 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 503 TK AD F G A+ ELD GD I+ D+ Q+ ++ + I + NE R LE+ Sbjct: 366 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 424
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC6-like) (aPC6) Length = 1696 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = -2 Query: 434 TSKQ*GNQGEGQDRSTEGQRDCRGECGVKNSDEYLPCTHGDTRSYNRKC-RLCNTRGGME 258 TS + G G + + + C+ +C +D+ L C H DT Y+ C + C R E Sbjct: 860 TSCEDGEYGTEEGKCEDCNIICK-KCNGSQADQCLEC-HHDTNLYDTTCVQYCGNRRYPE 917 Query: 257 EGCCSGSNFHWPGCSG 210 G C + GC G Sbjct: 918 NGECHPCHPSCLGCIG 933
>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) (Fragments) Length = 1027 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/75 (26%), Positives = 38/75 (50%) Frame = -3 Query: 652 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 473 F Q +KE Q+ +I+ D K + +EE + ++ E E + D+E E K Sbjct: 426 FQATTQGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYETEMFDYEQLSELLKK 482 Query: 472 EGMFFKSLGKVKKPQ 428 + F++++ KV +P+ Sbjct: 483 QAQFYENIVKVIRPK 497
>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1217 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 415 IKVKAKIEAQKVREIAEESAGS 350 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome segregation protein SmcD) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) (Mad member-interacting protein 1) Length = 1217 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 415 IKVKAKIEAQKVREIAEESAGS 350 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) (Chromosome-associated polypeptide) (hCAP) (Bamacan) (Basement membrane-associated chondroitin proteoglycan) Length = 1217 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 415 IKVKAKIEAQKVREIAEESAGS 350 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin| sulfate proteoglycan 6) Length = 1218 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = -3 Query: 595 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 416 ++ L +K ++ E + R + +ED E + E K + K + + E+ Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298 Query: 415 IKVKAKIEAQKVREIAEESAGS 350 IK + K+E K +++ +E AG+ Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
>TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondrial precursor (EC| 5.99.1.3) Length = 1053 Score = 30.0 bits (66), Expect = 7.1 Identities = 28/118 (23%), Positives = 54/118 (45%) Frame = -3 Query: 652 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 473 FD G+ +KE I + E + + YE+ ++Q++E E +E+ ++IE N Sbjct: 898 FDRNGE--LKEFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTN 955 Query: 472 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLT 299 + +S+G+ +++ K + +V +A + SK YL M + LT Sbjct: 956 GTIEIRSMGR-------NQLEEKLQEMGFRVDPMATIAKNSKKANYGYLLEMPVSRLT 1006
>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)| Length = 671 Score = 30.0 bits (66), Expect = 7.1 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Frame = -3 Query: 577 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 404 K++ EE ++ +E+E L+ DF +W + M+ + +G +K +EEI++ Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182 Query: 403 AKI 395 +I Sbjct: 183 KQI 185
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)| Length = 1969 Score = 30.0 bits (66), Expect = 7.1 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%) Frame = -3 Query: 628 MKELDQIGDQIMERL----DSKMQSYEETAEMQRQ--------EIEMNERVLEDFEDWIE 485 + +L+ + D+I+ R+ S+++SY AE++R+ ++ N R W Sbjct: 783 LAKLEDLRDEILSRIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTW-- 840 Query: 484 EEKNEGMFFKSLGKVK---KPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMA 314 +FK GKVK K +E + ++ QK+ E + +++++ +A + Sbjct: 841 ------EWFKLFGKVKPMLKAGKEQEAMGELAVKIQKLEEAVQRGEIARSQLESQVADL- 893 Query: 313 ILGLTIANAVFATPEVEWRKVA 248 + NA+F + E E +A Sbjct: 894 ---VEEKNALFLSLETEKANLA 912
>ESSB_STAAW (Q7A1V2) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAU (P0C053) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAS (Q6GCI6) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAR (Q6GK25) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAN (Q7A7S0) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAM (Q99WU0) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>ESSB_STAAC (Q5HJ87) Protein essB| Length = 444 Score = 30.0 bits (66), Expect = 7.1 Identities = 25/96 (26%), Positives = 46/96 (47%) Frame = -3 Query: 634 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 N + E+ GD ++ + + Y + + Q+I E+ ++D + EEEK + Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411 Query: 454 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 347 K +K + EE + K K +AQK +E +E+ K Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate| filament-associated protein) (IFAP300) (Fragment) Length = 4473 Score = 29.6 bits (65), Expect = 9.3 Identities = 24/100 (24%), Positives = 46/100 (46%) Frame = -3 Query: 655 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 476 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1638 EQELIRLRAETEQGEQQRQLLEEELARLQREATAATHKRQELEAELAK-------VRAEM 1690 Query: 475 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 356 + K+ + + +E+ K + + EA + RE+AEE+A Sbjct: 1691 EVLLASKARAEEESRSTSEKSKQRLEAEADRFRELAEEAA 1730
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417| Length = 511 Score = 29.6 bits (65), Expect = 9.3 Identities = 32/128 (25%), Positives = 56/128 (43%) Frame = -3 Query: 670 KDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDW 491 KDA+TE ++I +N + E + E+ +K E+ ++ Q+I+ E L+ + Sbjct: 36 KDAETEAEVIKKNKLLE-------VKEKFLNKKADLEKEVALRNQKIQQAENKLKQ-REM 87 Query: 490 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 311 + ++ E + K L E VK +EAQ V ++ K + L AI Sbjct: 88 VLSQRQEEIQRKKL---------EAEAVKENLEAQLVIVDKKKEELDKLQHQEIEKLEAI 138 Query: 310 LGLTIANA 287 GL+ A Sbjct: 139 SGLSADEA 146
>IOVO_TINMA (P52254) Ovomucoid (Fragment)| Length = 51 Score = 29.6 bits (65), Expect = 9.3 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = -2 Query: 374 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 276 DC G + EY P D ++Y+ KC CN Sbjct: 4 DCSGYPKPACTAEYFPLCGSDNQTYSNKCAFCN 36
>IOVO_CASCA (P62337) Ovomucoid (Fragment)| Length = 54 Score = 29.6 bits (65), Expect = 9.3 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 344 SDEYLPCTHGDTRSYNRKCRLCN 276 S EY+P D+++YN KC C+ Sbjct: 15 SPEYMPLCGSDSKTYNNKCDFCS 37
>IOVO_CASBE (P62336) Ovomucoid (Fragment)| Length = 54 Score = 29.6 bits (65), Expect = 9.3 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = -2 Query: 344 SDEYLPCTHGDTRSYNRKCRLCN 276 S EY+P D+++YN KC C+ Sbjct: 15 SPEYMPLCGSDSKTYNNKCDFCS 37
>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein| downstream of CRK) (DOCK180) Length = 1865 Score = 29.6 bits (65), Expect = 9.3 Identities = 19/70 (27%), Positives = 37/70 (52%) Frame = -3 Query: 637 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 458 Q +KE Q+ +I+ D K + +EE + ++ E E + D+E E K + F+ Sbjct: 1269 QGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYENEMFDYEQLSELLKKQAQFY 1325 Query: 457 KSLGKVKKPQ 428 +++ KV +P+ Sbjct: 1326 ENIVKVIRPK 1335
>SWC3_YEAST (P31376) SWR1-complex protein 3| Length = 625 Score = 29.6 bits (65), Expect = 9.3 Identities = 16/69 (23%), Positives = 35/69 (50%) Frame = -3 Query: 583 DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 404 D Q +++ E++++E E+ + + + EE+ K + K +K Q +E K K Sbjct: 177 DKIEQKWQDEQELKKKEKELKRKNDAEAKRLRMEERKRQQMQKKIAKEQKLQLQKENKAK 236 Query: 403 AKIEAQKVR 377 K+E + ++ Sbjct: 237 QKLEQEALK 245
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)| Length = 4687 Score = 29.6 bits (65), Expect = 9.3 Identities = 24/100 (24%), Positives = 46/100 (46%) Frame = -3 Query: 655 EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 476 E ++I A E + Q++E +++Q A +RQE+E + E Sbjct: 1852 EQELIRLRAETEQGEHQRQLLEEELARLQHEATAATQKRQELEAELAK-------VRAEM 1904 Query: 475 NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 356 + K+ + + +E+ K + + EA + RE+AEE+A Sbjct: 1905 EVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1944
>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040| Length = 592 Score = 29.6 bits (65), Expect = 9.3 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%) Frame = -3 Query: 625 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 494 +++ + G+ ++ +DSKM+S EE E R ++ +++ +E F D Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195
>CING_HUMAN (Q9P2M7) Cingulin| Length = 1197 Score = 29.6 bits (65), Expect = 9.3 Identities = 22/104 (21%), Positives = 54/104 (51%), Gaps = 11/104 (10%) Frame = -3 Query: 625 KELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 455 KEL++IG+ Q +++L ++++ Y+E A R+E+ +R +D+ E EK G + Sbjct: 850 KELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS--EAEKTSGGLSR 904 Query: 454 SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 347 ++++ + ++ ++ AQ+++ + +E+ K Sbjct: 905 LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKK 948 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,527,862 Number of Sequences: 219361 Number of extensions: 1752642 Number of successful extensions: 6916 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 6483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6896 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7026286028 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
