>REV_HV1MA (P04622) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 117

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GR E P PL   P  R T  CN D G S
Sbjct: 61  LSTYLGRPEEPVPLQLPPLERLTLNCNEDCGTS 93

>REV_HV1BN (P12485) REV protein (Anti-repression transactivator protein)|
           (ART/TRS) (Fragment)
          Length = 106

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 89  STFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           S + LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 46  SGWILSTFLGRSAEPVPLQLPPLERLTLDCNEDCGTS 82

>REV_HV1LW (Q70624) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 118

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 62  LSTYLGRSAKPVPLQLPPLERLTLDCNEDCGTS 94

>REV_HV1B8 (P05864) REV protein (Anti-repression transactivator protein)|
           (ART/TRS) (Fragment)
          Length = 106

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 50  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 82

>GLI1_XENLA (Q91690) Zinc finger protein GLI1 (GLI-1) (Fragment)|
          Length = 1360

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 194  DQHPNCTARLTGMGDGSSEETDTRSDQHQN 105
            +QHP   A +T  GD    + DTR +QH+N
Sbjct: 1083 EQHPKSMAMMTNSGD----DVDTRQNQHKN 1108

>REV_HV1PV (P69719) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1H3 (P69718) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1BR (P04620) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1B1 (P04616) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV112 (P04325) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LSTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1C4 (P05865) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 89  STFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           S + LS+ +GRS  P PL   P  R T  C+ D G S
Sbjct: 56  SAWLLSTCLGRSAEPVPLQLPPLERLTLDCSEDCGTS 92

>REV_HV1Z2 (P12483) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 118

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRSE P PL   P  R    C+ D G S
Sbjct: 60  LSTYLGRSEEPVPLQLPPLERLNLNCSEDCGAS 92

>REV_HV1Z6 (P04619) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRSE P PL   P  R    C+ D G S
Sbjct: 60  LSTYLGRSEEPVPLQLPPLERLNLNCSEDCGTS 92

>REV_HV1A2 (P04623) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +2

Query: 89  STFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           S + LS+ +GRS  P PL   P  R T  C+ D G S
Sbjct: 56  SGWILSTYLGRSAEPVPLQLPPLERLTLDCSEDCGNS 92

>REV_HV1Z8 (P05869) REV protein (Anti-repression transactivator protein)|
           (ART/TRS) (Fragment)
          Length = 90

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R    CN D G S
Sbjct: 34  LSTLLGRSPEPVPLQLPPLERLNLNCNEDCGTS 66

>REV_HV1SC (P05872) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 89  STFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           S + LS+ +GR   P PL   P  R T  CN D G S
Sbjct: 56  SGWILSNYLGRLAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1S3 (P19547) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           LS+ +GRS  P PL   P  R T  C+ D G S
Sbjct: 60  LSTVLGRSSEPVPLQLPPLDRLTLDCSEDCGTS 92

>REV_HV1JR (P20869) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +2

Query: 83  TNSTFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           T S   LS+ +GR   P PL   P  R T  CN D G S
Sbjct: 54  TISERILSTYLGRPAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1H2 (P04618) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 116

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +2

Query: 101 LSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           L + +GRS  P PL   P  R T  CN D G S
Sbjct: 60  LGTYLGRSAEPVPLQLPPLERLTLDCNEDCGTS 92

>REV_HV1J3 (P12484) REV protein (Anti-repression transactivator protein)|
           (ART/TRS) (Fragment)
          Length = 113

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +2

Query: 89  STFYLSSDVGRSEYPSPLNCRPPFRSTERCNSDVGRS 199
           S + +S+ +GR   P PL   P  R T  CN D G S
Sbjct: 53  SGWIISNYLGRPAEPVPLQLPPLERLTLDCNEDCGTS 89


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,239,344
Number of Sequences: 219361
Number of extensions: 521481
Number of successful extensions: 1407
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)