>emb|BX322784.3| Human DNA sequence from clone RP11-3D23 on chromosome X Contains a
             Sjogren syndrome antigen B (autoantigen La) (SSB)
             pseudogene, complete sequence
          Length = 169147

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 358   tagcttccttcttttttctgggg 380
             |||||||||||||||||||||||
Sbjct: 67245 tagcttccttcttttttctgggg 67267

>ref|NM_192726.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 4344

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 211 ctcccctcggccgccgccctcctcca 236
           |||||||| |||||||||||||||||
Sbjct: 240 ctcccctccgccgccgccctcctcca 215

>emb|AL607038.3| Human DNA sequence from clone RP11-292B14 on chromosome 13 Contains
             part of the UGCGL2 gene for UDP-glucose ceramide
             glucosyltransferase-like 2 (HUGT2 FLJ10873 FLJ11485) and a
             CpG island, complete sequence
          Length = 63266

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 227   ccctcctccatcttctctgttg 248
             ||||||||||||||||||||||
Sbjct: 43536 ccctcctccatcttctctgttg 43557

>tpg|BK001016.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) isolate
           P0410E03.6 PDR2 ABC transporter (pdr2) gene, complete
           cds
          Length = 8415

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 211 ctcccctcggccgccgccctcctcca 236
           |||||||| |||||||||||||||||
Sbjct: 258 ctcccctccgccgccgccctcctcca 233

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 211      ctcccctcggccgccgccctcctcca 236
                |||||||| |||||||||||||||||
Sbjct: 24069475 ctcccctccgccgccgccctcctcca 24069500

>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E03
          Length = 164839

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 211   ctcccctcggccgccgccctcctcca 236
             |||||||| |||||||||||||||||
Sbjct: 45297 ctcccctccgccgccgccctcctcca 45322

>dbj|AK107616.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-C11, full
           insert sequence
          Length = 1535

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 225 cgccctcctccatcttctctgt 246
           ||||||||||||||||||||||
Sbjct: 998 cgccctcctccatcttctctgt 977

>emb|AJ535044.1|OSA535044 Oryza sativa (japonica cultivar-group) pdr11 gene for PDR-like ABC
           transporter, exons 1-21
          Length = 8415

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 211 ctcccctcggccgccgccctcctcca 236
           |||||||| |||||||||||||||||
Sbjct: 258 ctcccctccgccgccgccctcctcca 233

>emb|AL158065.7| Human DNA sequence from clone RP11-64I8 on chromosome 13, complete
             sequence
          Length = 68301

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 362   ttccttcttttttctggggtt 382
             |||||||||||||||||||||
Sbjct: 10923 ttccttcttttttctggggtt 10903

>gb|AC099774.6| Oryza sativa chromosome 10 BAC OSJNBa0073L20 genomic sequence, complete
             sequence
          Length = 147651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 250   cgttcatcacaggacgagtactgtc 274
             ||||||||||||||| |||||||||
Sbjct: 83241 cgttcatcacaggacaagtactgtc 83265

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     cgttcatcacaggacgagtactgtc 274
               ||||||||||||||| |||||||||
Sbjct: 8692600 cgttcatcacaggacaagtactgtc 8692624

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 250     cgttcatcacaggacgagtactgtc 274
               ||||||||||||||| |||||||||
Sbjct: 8697739 cgttcatcacaggacaagtactgtc 8697763

>ref|XM_483797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1444

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 gccgccgccctcctccatct 239
           ||||||||||||||||||||
Sbjct: 127 gccgccgccctcctccatct 108

>ref|XM_466278.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 381  ttccatgtcggctcctccaagtctgagg 408
            |||||| | |||||||||||||||||||
Sbjct: 1595 ttccattttggctcctccaagtctgagg 1568

>gb|AC159980.10| Mus musculus chromosome 3, clone RP24-171D20, complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   ccctcctccatcttctctgt 246
             ||||||||||||||||||||
Sbjct: 86586 ccctcctccatcttctctgt 86605

>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7,
              complete sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 77     actcttaacaaacagtacatttta 100
              ||||||||||||||| ||||||||
Sbjct: 103041 actcttaacaaacagaacatttta 103064

>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     tggcgttcatcacaggacga 266
               ||||||||||||||||||||
Sbjct: 1946632 tggcgttcatcacaggacga 1946651

>emb|AJ786365.1| Paracentrotus lividus partial mRNA for 7a fibrillar collagen
           (coll7a gene)
          Length = 1112

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 297 ccaccactcctgaacctact 316
           ||||||||||||||||||||
Sbjct: 320 ccaccactcctgaacctact 339

>gb|AC138449.10| Medicago truncatula clone mth2-14o23, complete sequence
          Length = 30085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 96  ttttatctaagttctgatgt 115
           ||||||||||||||||||||
Sbjct: 33  ttttatctaagttctgatgt 52

>gb|AC149206.2| Medicago truncatula chromosome 2 BAC clone mte1-49n15, complete
             sequence
          Length = 113539

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    ttttatctaagttctgatgt 115
             ||||||||||||||||||||
Sbjct: 13604 ttttatctaagttctgatgt 13585

>gb|AC154596.2| Mus musculus BAC clone RP23-354C17 from chromosome 17, complete sequence
          Length = 208266

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    gccgccctcctccatcttctctgt 246
              |||||||||| |||||||||||||
Sbjct: 188283 gccgccctcccccatcttctctgt 188260

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 220      gccgccgccctcctccatct 239
                ||||||||||||||||||||
Sbjct: 28149296 gccgccgccctcctccatct 28149315

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 381      ttccatgtcggctcctccaagtctgagg 408
                |||||| | |||||||||||||||||||
Sbjct: 21440086 ttccattttggctcctccaagtctgagg 21440113

>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0020C11
          Length = 163328

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 381   ttccatgtcggctcctccaagtctgagg 408
             |||||| | |||||||||||||||||||
Sbjct: 35013 ttccattttggctcctccaagtctgagg 35040

>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1712_E04
          Length = 110098

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 381    ttccatgtcggctcctccaagtctgagg 408
              |||||| | |||||||||||||||||||
Sbjct: 100039 ttccattttggctcctccaagtctgagg 100066

>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0604E01
          Length = 159049

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    gccgccgccctcctccatct 239
              ||||||||||||||||||||
Sbjct: 146791 gccgccgccctcctccatct 146810

>gb|AY396077.1| Ponera striata voucher FLAS 198268 maturase K (matK) gene, partial
           cds; chloroplast
          Length = 1417

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 362 ttccttcttttttctggggt 381
           ||||||||||||||||||||
Sbjct: 915 ttccttcttttttctggggt 934

>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0543D10
          Length = 134866

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   gccgccgccctcctccatct 239
             ||||||||||||||||||||
Sbjct: 32769 gccgccgccctcctccatct 32788

>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19,
             complete sequence
          Length = 171679

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 88    acagtacattttatctaagttctg 111
             |||||||||||||||| |||||||
Sbjct: 98523 acagtacattttatcttagttctg 98546

>dbj|AK063290.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-E02, full
           insert sequence
          Length = 1444

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 gccgccgccctcctccatct 239
           ||||||||||||||||||||
Sbjct: 127 gccgccgccctcctccatct 108

>emb|AL928597.19| Mouse DNA sequence from clone RP23-373N5 on chromosome 4, complete
             sequence
          Length = 163961

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   cctcctccatcttctctgtt 247
             ||||||||||||||||||||
Sbjct: 23084 cctcctccatcttctctgtt 23103

>gb|AC163731.2| Mus musculus BAC clone RP23-380F10 from chromosome 17, complete sequence
          Length = 185201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gccgccctcctccatcttctctgt 246
              |||||||||| |||||||||||||
Sbjct: 121146 gccgccctcccccatcttctctgt 121169

>emb|AL683891.11| Mouse DNA sequence from clone RP23-435E7 on chromosome 3, complete
              sequence
          Length = 162394

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 227    ccctcctccatcttctctgt 246
              ||||||||||||||||||||
Sbjct: 123637 ccctcctccatcttctctgt 123656


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,318,457
Number of Sequences: 3902068
Number of extensions: 3318457
Number of successful extensions: 73785
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73589
Number of HSP's gapped (non-prelim): 196
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)