ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2e02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_720222.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 48 0.016
2gb|AC093877.3| Homo sapiens BAC clone RP11-637G19 from 4, comple... 44 0.24
3gb|AC131947.1| Homo sapiens BAC clone RP11-123I8 from 4, complet... 44 0.24
4emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, com... 44 0.24
5gb|U58745.1| Caenorhabditis elegans cosmid C10G6, complete sequence 42 0.96
6gb|U41009.1| Caenorhabditis elegans cosmid C06E7, complete sequence 42 0.96
7emb|AL355605.10| Human DNA sequence from clone RP11-456P14 on ch... 42 0.96
8emb|AL161718.14| Human DNA sequence from clone RP11-29G24 on chr... 42 0.96
9emb|BX511195.5| Zebrafish DNA sequence from clone DKEYP-57D12 in... 42 0.96
10gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, compl... 42 0.96
11gb|AC094109.2| Homo sapiens chromosome 5 clone RP11-62E10, compl... 42 0.96
12gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, comple... 42 0.96
13gb|AC068323.8|AC068323 Homo sapiens chromosome 5 clone RP11-62E1... 42 0.96
14gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6... 40 3.8
15gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, c... 40 3.8
16ref|NM_001015041.1| Danio rerio connective tissue growth factor ... 40 3.8
17gb|BC115209.1| Danio rerio connective tissue growth factor, mRNA... 40 3.8
18gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, co... 40 3.8
19gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom... 40 3.8
20gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosom... 40 3.8
21gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC... 40 3.8
22ref|XM_668454.1| Plasmodium berghei strain ANKA hypothetical pro... 40 3.8
23gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cance... 40 3.8
24emb|AL359980.9| Human DNA sequence from clone RP5-1027O15 on chr... 40 3.8
25gb|AC104644.3| Homo sapiens chromosome 3 clone RP11-281N1, compl... 40 3.8
26emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chr... 40 3.8
27emb|AL603785.4| Zebrafish DNA sequence from clone BUSM1-46M7 Con... 40 3.8
28gb|AC153988.5| Mus musculus 6 BAC RP24-553I1 (Roswell Park Cance... 40 3.8
29emb|BX004993.16| Zebrafish DNA sequence from clone CH211-163C2 i... 40 3.8
30emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in ... 40 3.8
31emb|CR354402.9| Zebrafish DNA sequence from clone CH211-119D14 i... 40 3.8
32gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, com... 40 3.8
33gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, com... 40 3.8
34emb|BX914204.20| Zebrafish DNA sequence from clone CH211-113E18 ... 40 3.8
35emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in ... 40 3.8
36gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, c... 40 3.8
37gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, com... 40 3.8
38gb|AC104633.2| Homo sapiens chromosome 3 clone RP11-118O11, comp... 40 3.8
39gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, comp... 40 3.8
40ref|XM_704574.1| PREDICTED: Danio rerio similar to connective ti... 40 3.8
41ref|XM_688024.1| PREDICTED: Danio rerio similar to connective ti... 40 3.8
42ref|XM_704573.1| PREDICTED: Danio rerio similar to connective ti... 40 3.8
43ref|XM_682587.1| PREDICTED: Danio rerio similar to connective ti... 40 3.8
44ref|XM_703729.1| PREDICTED: Danio rerio similar to connective ti... 40 3.8
45gb|AC092814.2| Homo sapiens chromosome 1 clone RP11-565J7, compl... 40 3.8
46ref|XM_684379.1| PREDICTED: Danio rerio similar to ethanolamine ... 40 3.8
47emb|BX682238.10| Zebrafish DNA sequence from clone CH211-189O17 ... 40 3.8
48gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 3.8
49gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, compl... 40 3.8
50emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 i... 40 3.8
51gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-27... 40 3.8
52gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome... 40 3.8
53gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G... 40 3.8
54gb|AC012152.13| Homo sapiens 3 BAC CTC-552C10 (Cal Tech Human BA... 40 3.8
55gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complem... 40 3.8
56gb|DQ003082.1| Homo sapiens matrix metalloproteinase 16 (membran... 40 3.8
57gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complet... 40 3.8
58gb|AC135377.3| Mus musculus BAC clone RP24-66B2 from chromosome ... 40 3.8
59emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 i... 40 3.8
60emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 i... 40 3.8
61emb|BX649261.3| Zebrafish DNA sequence from clone DKEY-215A8 in ... 40 3.8
62emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in... 40 3.8
63emb|CR848004.8| Zebrafish DNA sequence from clone CH211-237I9 in... 40 3.8
64gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 3.8
65emb|AL772354.6| Mouse DNA sequence from clone RP23-54P14 on chro... 40 3.8
66emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chr... 40 3.8
67emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on ch... 40 3.8 
>ref|XM_720222.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04937)
            partial mRNA
          Length = 2724

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 71   ttatttacaacagaaaaaggaacaaaat 98
            |||||||||||| |||||||||||||||
Sbjct: 1729 ttatttacaacaaaaaaaggaacaaaat 1756
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>gb|AC093877.3| Homo sapiens BAC clone RP11-637G19 from 4, complete sequence
          Length = 162150

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    aacagaaaaaggaacaaaatat 100
             ||||||||||||||||||||||
Sbjct: 47202 aacagaaaaaggaacaaaatat 47223
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>gb|AC131947.1| Homo sapiens BAC clone RP11-123I8 from 4, complete sequence
          Length = 132585

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 79    aacagaaaaaggaacaaaatat 100
             ||||||||||||||||||||||
Sbjct: 52385 aacagaaaaaggaacaaaatat 52406
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>emb|AL117204.1|CEY116A8C Caenorhabditis elegans YAC Y116A8C, complete sequence
          Length = 260341

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 155    cttttggaacacagaaatttta 176
              ||||||||||||||||||||||
Sbjct: 221402 cttttggaacacagaaatttta 221423
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>gb|U58745.1| Caenorhabditis elegans cosmid C10G6, complete sequence
          Length = 15659

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    caacagaaaaaggaacaaaat 98
             |||||||||||||||||||||
Sbjct: 12800 caacagaaaaaggaacaaaat 12780
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>gb|U41009.1| Caenorhabditis elegans cosmid C06E7, complete sequence
          Length = 44451

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 78  caacagaaaaaggaacaaaat 98
           |||||||||||||||||||||
Sbjct: 641 caacagaaaaaggaacaaaat 621
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>emb|AL355605.10| Human DNA sequence from clone RP11-456P14 on chromosome 13, complete
             sequence
          Length = 55142

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 65    tttattttatttacaacagaa 85
             |||||||||||||||||||||
Sbjct: 49535 tttattttatttacaacagaa 49555
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>emb|AL161718.14| Human DNA sequence from clone RP11-29G24 on chromosome 13 Contains part
             of the NEAB gene for neurobeachin (BCL8B FLJ10197
             KIAA1544), complete sequence
          Length = 58536

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 99    atgtacattattttccagggaacat 123
             |||||||||||||||||| ||||||
Sbjct: 16282 atgtacattattttccagtgaacat 16258
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>emb|BX511195.5| Zebrafish DNA sequence from clone DKEYP-57D12 in linkage group 17,
             complete sequence
          Length = 79527

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    acaacagaaaaaggaacaaaa 97
             |||||||||||||||||||||
Sbjct: 22242 acaacagaaaaaggaacaaaa 22222
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>gb|AC093529.2| Homo sapiens chromosome 5 clone RP11-29K14, complete sequence
          Length = 109306

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ctctactatttattttattta 77
             |||||||||||||||||||||
Sbjct: 27608 ctctactatttattttattta 27628
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>gb|AC094109.2| Homo sapiens chromosome 5 clone RP11-62E10, complete sequence
          Length = 160039

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     ctctactatttattttattta 77
              |||||||||||||||||||||
Sbjct: 122138 ctctactatttattttattta 122158
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>gb|AC098590.3| Homo sapiens BAC clone RP11-324J13 from 4, complete sequence
          Length = 157544

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     agaaaaaggaacaaaatatgtacat 106
              ||||||||||||||| |||||||||
Sbjct: 137501 agaaaaaggaacaaattatgtacat 137525
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>gb|AC068323.8|AC068323 Homo sapiens chromosome 5 clone RP11-62E10, complete sequence
          Length = 160039

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ctctactatttattttattta 77
             |||||||||||||||||||||
Sbjct: 37902 ctctactatttattttattta 37882
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>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete
             sequence
          Length = 253001

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tactatttattttatttaca 79
             ||||||||||||||||||||
Sbjct: 72065 tactatttattttatttaca 72046
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>gb|AC101948.10| Mus musculus chromosome 15, clone RP24-139K14, complete sequence
          Length = 182534

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    caaaatatgtacattatttt 112
             ||||||||||||||||||||
Sbjct: 13007 caaaatatgtacattatttt 13026
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>ref|NM_001015041.1| Danio rerio connective tissue growth factor (ctgf), mRNA
          Length = 2115

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1921 acaaaatatgtacattattt 1902
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>gb|BC115209.1| Danio rerio connective tissue growth factor, mRNA (cDNA clone
            MGC:136644 IMAGE:7995386), complete cds
          Length = 2146

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1925 acaaaatatgtacattattt 1906
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>gb|AC158776.5| Mus musculus chromosome 15, clone RP23-261G10, complete sequence
          Length = 192769

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    caaaatatgtacattatttt 112
             ||||||||||||||||||||
Sbjct: 65547 caaaatatgtacattatttt 65566
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>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     tttattttatttacaacagaaaaa 88
              ||||| ||||||||||||||||||
Sbjct: 112866 tttatattatttacaacagaaaaa 112889
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>gb|AC125185.3| Mus musculus BAC clone RP23-301L11 from chromosome 19, complete
            sequence
          Length = 168526

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   aaaatatgtacattattttc 113
            ||||||||||||||||||||
Sbjct: 2626 aaaatatgtacattattttc 2607
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>gb|AC009918.5|ATAC009918 Arabidopsis thaliana chromosome III BAC T19F11 genomic sequence,
             complete sequence
          Length = 45173

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tatttattttatttacaaca 82
             ||||||||||||||||||||
Sbjct: 26366 tatttattttatttacaaca 26385
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>ref|XM_668454.1| Plasmodium berghei strain ANKA hypothetical protein (PB300263.00.0)
           partial mRNA
          Length = 969

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 71  ttatttacaacagaaaaaggaacaaaat 98
           |||||||||||| | |||||||||||||
Sbjct: 115 ttatttacaacaaagaaaggaacaaaat 142
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>gb|AC164169.8| Mus musculus 6 BAC RP23-413M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 209149

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 65    tttattttatttacaacagaaaaa 88
             |||||||||||||||| |||||||
Sbjct: 32632 tttattttatttacaaaagaaaaa 32609
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>emb|AL359980.9| Human DNA sequence from clone RP5-1027O15 on chromosome 11, complete
             sequence
          Length = 83218

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aaaaaggaacaaaatatgta 103
             ||||||||||||||||||||
Sbjct: 34841 aaaaaggaacaaaatatgta 34860
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>gb|AC104644.3| Homo sapiens chromosome 3 clone RP11-281N1, complete sequence
          Length = 187620

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 60     tactatttattttatttaca 79
              ||||||||||||||||||||
Sbjct: 120877 tactatttattttatttaca 120858
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>emb|AL136371.8| Human DNA sequence from clone RP11-110P20 on chromosome 1q31.1 Contains
             STSs, GSSs and a CpG island, complete sequence
          Length = 147784

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    tatttacaacagaaaaagga 91
             ||||||||||||||||||||
Sbjct: 46042 tatttacaacagaaaaagga 46061
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>emb|AL603785.4| Zebrafish DNA sequence from clone BUSM1-46M7 Contains a novel gene
             similar to EDG2 (lysophosphatidic acid receptor), the 3'
             part of a gene for a novel kinase, a novel transposase
             pseudogene and a CpG island, complete sequence
          Length = 89874

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    attatatacaatgcaaatgt 29
             ||||||||||||||||||||
Sbjct: 46371 attatatacaatgcaaatgt 46352
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>gb|AC153988.5| Mus musculus 6 BAC RP24-553I1 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 136725

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tttattttatttacaacagaaaaa 88
             |||||||||||||||| |||||||
Sbjct: 69085 tttattttatttacaaaagaaaaa 69108
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>emb|BX004993.16| Zebrafish DNA sequence from clone CH211-163C2 in linkage group 7,
             complete sequence
          Length = 150136

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tatttattttatttacaaca 82
             ||||||||||||||||||||
Sbjct: 61327 tatttattttatttacaaca 61346
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>emb|BX842685.6| Zebrafish DNA sequence from clone DKEY-28C10 in linkage group 5,
            complete sequence
          Length = 133388

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 69   ttttatttacaacagaaaaaggaa 92
            |||||||| |||||||||||||||
Sbjct: 8682 ttttattttcaacagaaaaaggaa 8705
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>emb|CR354402.9| Zebrafish DNA sequence from clone CH211-119D14 in linkage group 8,
             complete sequence
          Length = 169701

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    attatatacaatgcaaatgt 29
             ||||||||||||||||||||
Sbjct: 12090 attatatacaatgcaaatgt 12071
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>gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, complete sequence
          Length = 81277

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aaaaaggaacaaaatatgta 103
             ||||||||||||||||||||
Sbjct: 68519 aaaaaggaacaaaatatgta 68538
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>gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, complete sequence
          Length = 159476

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    attttatttacaacagaaaa 87
             ||||||||||||||||||||
Sbjct: 34434 attttatttacaacagaaaa 34453
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>emb|BX914204.20| Zebrafish DNA sequence from clone CH211-113E18 in linkage group 18,
             complete sequence
          Length = 169369

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tttattttatttacaacagaaaaa 88
             |||||||||||||||| |||||||
Sbjct: 72118 tttattttatttacaaaagaaaaa 72141
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>emb|BX936456.6| Zebrafish DNA sequence from clone DKEY-266J9 in linkage group 18,
             complete sequence
          Length = 173079

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    tttattttatttacaacagaaaaa 88
             |||||||||||||||| |||||||
Sbjct: 46706 tttattttatttacaaaagaaaaa 46729
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>gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, complete sequence
          Length = 158915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aaaaaggaacaaaatatgta 103
             ||||||||||||||||||||
Sbjct: 37714 aaaaaggaacaaaatatgta 37695
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>gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, complete sequence
          Length = 159531

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    attttatttacaacagaaaa 87
             ||||||||||||||||||||
Sbjct: 34434 attttatttacaacagaaaa 34453
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>gb|AC104633.2| Homo sapiens chromosome 3 clone RP11-118O11, complete sequence
          Length = 160172

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tactatttattttatttaca 79
             ||||||||||||||||||||
Sbjct: 17206 tactatttattttatttaca 17225
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>gb|AC099775.2| Homo sapiens chromosome 3 clone RP11-169G24, complete sequence
          Length = 181443

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    tatgtacattattttccagg 117
             ||||||||||||||||||||
Sbjct: 29934 tatgtacattattttccagg 29915
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>ref|XM_704574.1| PREDICTED: Danio rerio similar to connective tissue growth factor,
            transcript variant 3 (LOC573749), mRNA
          Length = 2139

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1951 acaaaatatgtacattattt 1932
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>ref|XM_688024.1| PREDICTED: Danio rerio similar to connective tissue growth factor,
            transcript variant 1 (LOC573749), mRNA
          Length = 1926

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1739 acaaaatatgtacattattt 1720
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>ref|XM_704573.1| PREDICTED: Danio rerio similar to connective tissue growth factor,
            transcript variant 2 (LOC573749), mRNA
          Length = 2177

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1990 acaaaatatgtacattattt 1971
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>ref|XM_682587.1| PREDICTED: Danio rerio similar to connective tissue growth factor,
            transcript variant 1 (LOC573299), mRNA
          Length = 2140

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1952 acaaaatatgtacattattt 1933
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>ref|XM_703729.1| PREDICTED: Danio rerio similar to connective tissue growth factor,
            transcript variant 2 (LOC573299), mRNA
          Length = 2178

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 92   acaaaatatgtacattattt 111
            ||||||||||||||||||||
Sbjct: 1991 acaaaatatgtacattattt 1972
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>gb|AC092814.2| Homo sapiens chromosome 1 clone RP11-565J7, complete sequence
          Length = 170245

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    aacaaaatatgtacattattttcc 114
             |||||||||||| |||||||||||
Sbjct: 93308 aacaaaatatgtgcattattttcc 93331
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>ref|XM_684379.1| PREDICTED: Danio rerio similar to ethanolamine kinase 1, transcript
            variant 1 (LOC565971), mRNA
          Length = 3868

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 60   tactatttattttatttaca 79
            ||||||||||||||||||||
Sbjct: 2209 tactatttattttatttaca 2228
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>emb|BX682238.10| Zebrafish DNA sequence from clone CH211-189O17 in linkage group 24,
              complete sequence
          Length = 143212

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 69     ttttatttacaacagaaaaaggaa 92
              ||||||||||||||||| ||||||
Sbjct: 136747 ttttatttacaacagaagaaggaa 136770
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 64     atttattttatttacaacag 83
              ||||||||||||||||||||
Sbjct: 343275 atttattttatttacaacag 343256
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>gb|AC008775.7| Homo sapiens chromosome 5 clone CTD-2019N2, complete sequence
          Length = 135503

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    ctctactatttattttattt 76
             ||||||||||||||||||||
Sbjct: 20834 ctctactatttattttattt 20815
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>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20,
              complete sequence
          Length = 151560

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     acaaaatatgtacattattt 111
              ||||||||||||||||||||
Sbjct: 128060 acaaaatatgtacattattt 128041
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>gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-277B22, complete sequence
          Length = 163386

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aaaaaggaacaaaatatgta 103
              ||||||||||||||||||||
Sbjct: 106046 aaaaaggaacaaaatatgta 106065
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>gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome 13, complete sequence
          Length = 206997

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   agcccttttggaacacagaa 170
             ||||||||||||||||||||
Sbjct: 70940 agcccttttggaacacagaa 70959
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>gb|AC083835.5|AC083835 Arabidopsis thaliana chromosome 1 BAC F2G19 genomic sequence, complete
             sequence
          Length = 133379

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tctactatttattttattta 77
             ||||||||||||||||||||
Sbjct: 51771 tctactatttattttattta 51752
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>gb|AC012152.13| Homo sapiens 3 BAC CTC-552C10 (Cal Tech Human BAC Library C) complete
              sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     acaacagaaaaaggaacaaa 96
              ||||||||||||||||||||
Sbjct: 102490 acaacagaaaaaggaacaaa 102509
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>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614)
             strain AX4, complete sequence
          Length = 182870

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    ttattttatttacaacagaa 85
             ||||||||||||||||||||
Sbjct: 61687 ttattttatttacaacagaa 61668
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>gb|DQ003082.1| Homo sapiens matrix metalloproteinase 16 (membrane-inserted) (MMP16)
              gene, complete cds
          Length = 290137

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     attttatttacaacagaaaa 87
              ||||||||||||||||||||
Sbjct: 194950 attttatttacaacagaaaa 194969
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>gb|AC096565.1| Homo sapiens BAC clone RP11-287O8 from 2, complete sequence
          Length = 172515

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    aaaatatgtacattattttc 113
             ||||||||||||||||||||
Sbjct: 45571 aaaatatgtacattattttc 45552
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>gb|AC135377.3| Mus musculus BAC clone RP24-66B2 from chromosome 19, complete sequence
          Length = 179745

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     aaaatatgtacattattttc 113
              ||||||||||||||||||||
Sbjct: 163763 aaaatatgtacattattttc 163744
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>emb|BX571976.11| Zebrafish DNA sequence from clone DKEY-174I19 in linkage group 18,
              complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    acattattttccagggaaca 122
              ||||||||||||||||||||
Sbjct: 130582 acattattttccagggaaca 130601
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>emb|BX649610.5| Zebrafish DNA sequence from clone CH211-170D11 in linkage group 18,
             complete sequence
          Length = 150831

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   acattattttccagggaaca 122
             ||||||||||||||||||||
Sbjct: 26044 acattattttccagggaaca 26063
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>emb|BX649261.3| Zebrafish DNA sequence from clone DKEY-215A8 in linkage group 4,
             complete sequence
          Length = 147890

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    tactatttattttatttaca 79
             ||||||||||||||||||||
Sbjct: 11600 tactatttattttatttaca 11619
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>emb|BX323010.9| Zebrafish DNA sequence from clone DKEY-266K12 in linkage group 20,
              complete sequence
          Length = 176396

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 92     acaaaatatgtacattattt 111
              ||||||||||||||||||||
Sbjct: 102962 acaaaatatgtacattattt 102943
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>emb|CR848004.8| Zebrafish DNA sequence from clone CH211-237I9 in linkage group 10,
             complete sequence
          Length = 91696

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 69    ttttatttacaacagaaaaaggaa 92
             |||||| |||||||||||||||||
Sbjct: 16365 ttttatgtacaacagaaaaaggaa 16388
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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 56      tctctactatttattttatttaca 79
               |||||| |||||||||||||||||
Sbjct: 3535552 tctctattatttattttatttaca 3535529
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>emb|AL772354.6| Mouse DNA sequence from clone RP23-54P14 on chromosome 4, complete
              sequence
          Length = 182737

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 7      ttaattatatacaatgcaaa 26
              ||||||||||||||||||||
Sbjct: 156969 ttaattatatacaatgcaaa 156988
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>emb|AL845524.5| Mouse DNA sequence from clone RP23-248D22 on chromosome 2, complete
              sequence
          Length = 174188

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     ggttcattctgaaatttctc 59
              ||||||||||||||||||||
Sbjct: 101324 ggttcattctgaaatttctc 101305
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>emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on chromosome 11, complete
             sequence
          Length = 101730

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    caacagaaaaaggaacaaaa 97
             ||||||||||||||||||||
Sbjct: 82536 caacagaaaaaggaacaaaa 82517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,903,370
Number of Sequences: 3902068
Number of extensions: 4903370
Number of successful extensions: 153306
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153036
Number of HSP's gapped (non-prelim): 270
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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