ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2d19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188058.1| Oryza sativa (japonica cultivar-group), Ozsa847... 137 4e-29
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
3dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
4dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
5dbj|AK073797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 137 4e-29
6gb|AY108732.1| Zea mays PCO097740 mRNA sequence 58 3e-05
7ref|NM_196098.1| Oryza sativa (japonica cultivar-group) putative... 44 0.40
8gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno... 44 0.40
9gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 44 0.40
10dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
11dbj|AK072810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
12dbj|AK059688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.40
13gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.40
14gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
15ref|XM_674342.1| Plasmodium berghei strain ANKA hypothetical pro... 42 1.6
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19gb|AC010731.3| Homo sapiens BAC clone RP11-363B11 from 2, comple... 42 1.6
20dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
21emb|AJ490493.1|OSA490493 Oryza sativa z124 snoRNA 42 1.6
22emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
23dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.6
24gb|AC069538.10| Homo sapiens chromosome 10 clone RP11-205C5, com... 40 6.2
25gb|DQ471134.1| Taphrina wiesneri isolate AFTOL-ID 265 RNA polyme... 40 6.2
26gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, com... 40 6.2
27gb|AC101744.13| Mus musculus chromosome 14, clone RP23-306E19, c... 40 6.2
28emb|AL358817.19| Human DNA sequence from clone RP11-399N22 on ch... 40 6.2
29gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosom... 40 6.2
30emb|BX321863.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 6.2
31emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in ... 40 6.2
32gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274... 40 6.2
33gb|DQ388570.1| Sepia officinalis hemocyanin subunit 2 mRNA, part... 40 6.2
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
35emb|BX005032.10| Zebrafish DNA sequence from clone CH211-180P9 i... 40 6.2
36gb|AC074176.5|AC074176 Arabidopsis thaliana chromosome 1 BAC T2H... 40 6.2
37gb|AC073506.11|AC073506 Arabidopsis thaliana chromosome 1 BAC F1... 40 6.2
38gb|AC099811.7| Homo sapiens chromosome 17, clone RP11-358B23, co... 40 6.2
39dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
40gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, comp... 40 6.2
41gb|U31093.1|XXU31093 Synthetic construct of S. cerevisiae acetyl... 40 6.2
42gb|AC154477.2| Mus musculus BAC clone RP24-134B24 from 14, compl... 40 6.2 
>ref|NM_188058.1| Oryza sativa (japonica cultivar-group), Ozsa8478 predicted mRNA
          Length = 2148

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Minus

                                                                        
Query: 258  ggacttctgccggccatctggaatggcaaaaggcataattggtttggacgaccggacaaa 317
            |||||| || || ||||||||||| || ||| | | |||||||||||| ||||||| |||
Sbjct: 2136 ggacttttgtcgtccatctggaatagcgaaaaggacaattggtttggaagaccggataaa 2077

                                                                        
Query: 318  tggaacatcacacctgtaatatcctttcctttcgagctgtataacttctcctttcttgac 377
            |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||  |||| 
Sbjct: 2076 tggagcatcacacctgtaataccctttcctttcaagctgtatgatttctccttgtttgag 2017

                                                                        
Query: 378  gttccgcatgtttgggtccccaagagctaaagcttctcgtcgagtgcatggattgagatt 437
             ||||||||||||| ||| ||||||||   |   ||| | | |||||||||||| |||||
Sbjct: 2016 attccgcatgtttgcgtctccaagagccggaaactcttggcaagtgcatggattaagatt 1957

                                     
Query: 438  gtcaaggaagtcctcatcttcttcc 462
            ||||||||| |  ||||||||||||
Sbjct: 1956 gtcaaggaaattatcatcttcttcc 1932
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Plus

                                                                           
Query: 258     ggacttctgccggccatctggaatggcaaaaggcataattggtttggacgaccggacaaa 317
               |||||| || || ||||||||||| || ||| | | |||||||||||| ||||||| |||
Sbjct: 9372891 ggacttttgtcgtccatctggaatagcgaaaaggacaattggtttggaagaccggataaa 9372950

                                                                           
Query: 318     tggaacatcacacctgtaatatcctttcctttcgagctgtataacttctcctttcttgac 377
               |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||  |||| 
Sbjct: 9372951 tggagcatcacacctgtaataccctttcctttcaagctgtatgatttctccttgtttgag 9373010

                                                                           
Query: 378     gttccgcatgtttgggtccccaagagctaaagcttctcgtcgagtgcatggattgagatt 437
                ||||||||||||| ||| ||||||||   |   ||| | | |||||||||||| |||||
Sbjct: 9373011 attccgcatgtttgcgtctccaagagccggaaactcttggcaagtgcatggattaagatt 9373070

                                        
Query: 438     gtcaaggaagtcctcatcttcttcc 462
               ||||||||| |  ||||||||||||
Sbjct: 9373071 gtcaaggaaattatcatcttcttcc 9373095
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>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Plus

                                                                         
Query: 258   ggacttctgccggccatctggaatggcaaaaggcataattggtttggacgaccggacaaa 317
             |||||| || || ||||||||||| || ||| | | |||||||||||| ||||||| |||
Sbjct: 43218 ggacttttgtcgtccatctggaatagcgaaaaggacaattggtttggaagaccggataaa 43277

                                                                         
Query: 318   tggaacatcacacctgtaatatcctttcctttcgagctgtataacttctcctttcttgac 377
             |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||  |||| 
Sbjct: 43278 tggagcatcacacctgtaataccctttcctttcaagctgtatgatttctccttgtttgag 43337

                                                                         
Query: 378   gttccgcatgtttgggtccccaagagctaaagcttctcgtcgagtgcatggattgagatt 437
              ||||||||||||| ||| ||||||||   |   ||| | | |||||||||||| |||||
Sbjct: 43338 attccgcatgtttgcgtctccaagagccggaaactcttggcaagtgcatggattaagatt 43397

                                      
Query: 438   gtcaaggaagtcctcatcttcttcc 462
             ||||||||| |  ||||||||||||
Sbjct: 43398 gtcaaggaaattatcatcttcttcc 43422
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>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0667A10
          Length = 152237

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Plus

                                                                          
Query: 258    ggacttctgccggccatctggaatggcaaaaggcataattggtttggacgaccggacaaa 317
              |||||| || || ||||||||||| || ||| | | |||||||||||| ||||||| |||
Sbjct: 149485 ggacttttgtcgtccatctggaatagcgaaaaggacaattggtttggaagaccggataaa 149544

                                                                          
Query: 318    tggaacatcacacctgtaatatcctttcctttcgagctgtataacttctcctttcttgac 377
              |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||  |||| 
Sbjct: 149545 tggagcatcacacctgtaataccctttcctttcaagctgtatgatttctccttgtttgag 149604

                                                                          
Query: 378    gttccgcatgtttgggtccccaagagctaaagcttctcgtcgagtgcatggattgagatt 437
               ||||||||||||| ||| ||||||||   |   ||| | | |||||||||||| |||||
Sbjct: 149605 attccgcatgtttgcgtctccaagagccggaaactcttggcaagtgcatggattaagatt 149664

                                       
Query: 438    gtcaaggaagtcctcatcttcttcc 462
              ||||||||| |  ||||||||||||
Sbjct: 149665 gtcaaggaaattatcatcttcttcc 149689
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>dbj|AK073797.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067G11, full
            insert sequence
          Length = 2453

 Score =  137 bits (69), Expect = 4e-29
 Identities = 171/205 (83%)
 Strand = Plus / Minus

                                                                        
Query: 258  ggacttctgccggccatctggaatggcaaaaggcataattggtttggacgaccggacaaa 317
            |||||| || || ||||||||||| || ||| | | |||||||||||| ||||||| |||
Sbjct: 2294 ggacttttgtcgtccatctggaatagcgaaaaggacaattggtttggaagaccggataaa 2235

                                                                        
Query: 318  tggaacatcacacctgtaatatcctttcctttcgagctgtataacttctcctttcttgac 377
            |||| |||||||||||||||| ||||||||||| |||||||| | ||||||||  |||| 
Sbjct: 2234 tggagcatcacacctgtaataccctttcctttcaagctgtatgatttctccttgtttgag 2175

                                                                        
Query: 378  gttccgcatgtttgggtccccaagagctaaagcttctcgtcgagtgcatggattgagatt 437
             ||||||||||||| ||| ||||||||   |   ||| | | |||||||||||| |||||
Sbjct: 2174 attccgcatgtttgcgtctccaagagccggaaactcttggcaagtgcatggattaagatt 2115

                                     
Query: 438  gtcaaggaagtcctcatcttcttcc 462
            ||||||||| |  ||||||||||||
Sbjct: 2114 gtcaaggaaattatcatcttcttcc 2090
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>gb|AY108732.1| Zea mays PCO097740 mRNA sequence
          Length = 2588

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 128/161 (79%)
 Strand = Plus / Minus

                                                                        
Query: 298  ggtttggacgaccggacaaatggaacatcacacctgtaatatcctttcctttcgagctgt 357
            ||||||||||| | || ||| ||  |||||||||| || || |||||||| |||||||||
Sbjct: 2299 ggtttggacgatctgataaaaggggcatcacacctatagtagcctttcctctcgagctgt 2240

                                                                        
Query: 358  ataacttctcctttcttgacgttccgcatgtttgggtccccaagagctaaagcttctcgt 417
            || |  |||||   ||||| ||||| |||||| |  || ||||| |||     ||| |||
Sbjct: 2239 atgatctctccacgcttgatgttcctcatgttcgcatctccaagggctgggatttcccgt 2180

                                                     
Query: 418  cgagtgcatggattgagattgtcaaggaagtcctcatcttc 458
            |||||||| || ||||||||||| ||||||||||| |||||
Sbjct: 2179 cgagtgcaagggttgagattgtcgaggaagtcctcgtcttc 2139
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>ref|NM_196098.1| Oryza sativa (japonica cultivar-group) putative glutamyl-tRNA
            synthetase (OJ1003C07.13), mRNA
          Length = 2142

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 418  cgagtgcatggattgagattgtcaaggaagtcctcatc 455
            ||||||||||| || || ||||||||||||| ||||||
Sbjct: 1970 cgagtgcatgggttcaggttgtcaaggaagttctcatc 1933



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 323  catcacacctgtaatatcctttcctttcgagctgtat 359
            |||| ||||||||||| |||||||| || ||||||||
Sbjct: 2065 catcgcacctgtaatagcctttcctctcaagctgtat 2029
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>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence,
            complete sequence
          Length = 106110

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 418  cgagtgcatggattgagattgtcaaggaagtcctcatc 455
            ||||||||||| || || ||||||||||||| ||||||
Sbjct: 2031 cgagtgcatgggttcaggttgtcaaggaagttctcatc 1994



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 323  catcacacctgtaatatcctttcctttcgagctgtat 359
            |||| ||||||||||| |||||||| || ||||||||
Sbjct: 2126 catcgcacctgtaatagcctttcctctcaagctgtat 2090
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>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OJ1003C07, from chromosome 10, complete
             sequence
          Length = 115188

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 418   cgagtgcatggattgagattgtcaaggaagtcctcatc 455
             ||||||||||| || || ||||||||||||| ||||||
Sbjct: 92852 cgagtgcatgggttcaggttgtcaaggaagttctcatc 92815



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 323   catcacacctgtaatatcctttcctttcgagctgtat 359
             |||| ||||||||||| |||||||| || ||||||||
Sbjct: 92947 catcgcacctgtaatagcctttcctctcaagctgtat 92911
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 418      cgagtgcatggattgagattgtcaaggaagtcctcatc 455
                ||||||||||| || || ||||||||||||| ||||||
Sbjct: 11066205 cgagtgcatgggttcaggttgtcaaggaagttctcatc 11066242



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 323      catcacacctgtaatatcctttcctttcgagctgtat 359
                |||| ||||||||||| |||||||| || ||||||||
Sbjct: 11066110 catcgcacctgtaatagcctttcctctcaagctgtat 11066146
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>dbj|AK072810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141A17, full
            insert sequence
          Length = 2726

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 418  cgagtgcatggattgagattgtcaaggaagtcctcatc 455
            ||||||||||| || || ||||||||||||| ||||||
Sbjct: 2134 cgagtgcatgggttcaggttgtcaaggaagttctcatc 2097



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 323  catcacacctgtaatatcctttcctttcgagctgtat 359
            |||| ||||||||||| |||||||| || ||||||||
Sbjct: 2229 catcgcacctgtaatagcctttcctctcaagctgtat 2193
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>dbj|AK059688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A11, full
           insert sequence
          Length = 1000

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 418 cgagtgcatggattgagattgtcaaggaagtcctcatc 455
           ||||||||||| || || ||||||||||||| ||||||
Sbjct: 525 cgagtgcatgggttcaggttgtcaaggaagttctcatc 488



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 323 catcacacctgtaatatcctttcctttcgagctgtat 359
           |||| ||||||||||| |||||||| || ||||||||
Sbjct: 620 catcgcacctgtaatagcctttcctctcaagctgtat 584
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 418      cgagtgcatggattgagattgtcaaggaagtcctcatc 455
                ||||||||||| || || ||||||||||||| ||||||
Sbjct: 11072645 cgagtgcatgggttcaggttgtcaaggaagttctcatc 11072682



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 323      catcacacctgtaatatcctttcctttcgagctgtat 359
                |||| ||||||||||| |||||||| || ||||||||
Sbjct: 11072550 catcgcacctgtaatagcctttcctctcaagctgtat 11072586
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>gb|AC132488.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0522C01,
             complete sequence
          Length = 136120

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 49    gcatatacactcaaacatgca 69
             |||||||||||||||||||||
Sbjct: 85158 gcatatacactcaaacatgca 85138
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>ref|XM_674342.1| Plasmodium berghei strain ANKA hypothetical protein (PB000205.03.0)
           partial mRNA
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 72  aggaatacataatttgatact 92
           |||||||||||||||||||||
Sbjct: 822 aggaatacataatttgatact 802
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 49      gcatatacactcaaacatgca 69
               |||||||||||||||||||||
Sbjct: 5462207 gcatatacactcaaacatgca 5462227
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 49      gcatatacactcaaacatgca 69
               |||||||||||||||||||||
Sbjct: 9618223 gcatatacactcaaacatgca 9618243
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 49       gcatatacactcaaacatgca 69
                |||||||||||||||||||||
Sbjct: 11057868 gcatatacactcaaacatgca 11057848
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>gb|AC010731.3| Homo sapiens BAC clone RP11-363B11 from 2, complete sequence
          Length = 128817

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 355   tgtataacttctcctttcttg 375
             |||||||||||||||||||||
Sbjct: 38905 tgtataacttctcctttcttg 38925
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>dbj|AP003540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0450D12
          Length = 176431

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    gcatatacactcaaacatgca 69
             |||||||||||||||||||||
Sbjct: 76840 gcatatacactcaaacatgca 76860
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>emb|AJ490493.1|OSA490493 Oryza sativa z124 snoRNA
          Length = 173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 323 catcacacctgtaatatcctttcctttcgagctgtat 359
           |||| ||||||||||| |||||||| || ||||||||
Sbjct: 73  catcgcacctgtaatagcctttcctctcaagctgtat 37
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
             complete sequence
          Length = 150283

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 49    gcatatacactcaaacatgca 69
             |||||||||||||||||||||
Sbjct: 16837 gcatatacactcaaacatgca 16857
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>dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-286N3, complete
              sequence
          Length = 213005

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 315    aaatggaacatcacacctgta 335
              |||||||||||||||||||||
Sbjct: 104140 aaatggaacatcacacctgta 104120
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>gb|AC069538.10| Homo sapiens chromosome 10 clone RP11-205C5, complete sequence
          Length = 169772

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aatccaagacactgaagtac 121
             ||||||||||||||||||||
Sbjct: 97754 aatccaagacactgaagtac 97773
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>gb|DQ471134.1| Taphrina wiesneri isolate AFTOL-ID 265 RNA polymerase II subunit 1
           (RPB1) gene, partial sequence
          Length = 665

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 acttctcctttcttgacgtt 380
           ||||||||||||||||||||
Sbjct: 632 acttctcctttcttgacgtt 613
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>gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, complete sequence
          Length = 159999

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     ctgactaaccgaatccaaga 110
              ||||||||||||||||||||
Sbjct: 154700 ctgactaaccgaatccaaga 154719
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>gb|AC101744.13| Mus musculus chromosome 14, clone RP23-306E19, complete sequence
          Length = 193615

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    ctgactaaccgaatccaaga 110
             ||||||||||||||||||||
Sbjct: 88748 ctgactaaccgaatccaaga 88767
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>emb|AL358817.19| Human DNA sequence from clone RP11-399N22 on chromosome 10 Contains 3'
              end of the ADAMTS14 gene for a disintegrin-like and
              metalloprotease (reprolysin type) with thrombospondin type
              1 motif 14,  a novel gene (FLJ32820), and a ribosomal
              protein S26 pseudogene, complete sequence
          Length = 134358

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aatccaagacactgaagtac 121
              ||||||||||||||||||||
Sbjct: 120604 aatccaagacactgaagtac 120585
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>gb|AC163658.2| Mus musculus BAC clone RP23-281B21 from chromosome 14, complete sequence
          Length = 141856

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 133    gttccaagtttcagtcatta 152
              ||||||||||||||||||||
Sbjct: 135700 gttccaagtttcagtcatta 135719
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>emb|BX321863.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 8/10
          Length = 286850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    tgcatggattgagattgtca 441
              ||||||||||||||||||||
Sbjct: 103182 tgcatggattgagattgtca 103163
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>emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in linkage group 15,
             complete sequence
          Length = 201465

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 355   tgtataacttctcctttctt 374
             ||||||||||||||||||||
Sbjct: 10169 tgtataacttctcctttctt 10150
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>gb|AC079638.3| Genomic sequence for Mus musculus, clone RP23-274A20, complete sequence
          Length = 162721

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 133   gttccaagtttcagtcatta 152
             ||||||||||||||||||||
Sbjct: 73288 gttccaagtttcagtcatta 73307
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>gb|DQ388570.1| Sepia officinalis hemocyanin subunit 2 mRNA, partial cds
          Length = 10146

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 72   aggaatacataatttgatactgac 95
            |||||||||||||||||| |||||
Sbjct: 1002 aggaatacataatttgattctgac 979
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 75       aatacataatttgatactga 94
                ||||||||||||||||||||
Sbjct: 28358249 aatacataatttgatactga 28358268
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>emb|BX005032.10| Zebrafish DNA sequence from clone CH211-180P9 in linkage group 16,
             complete sequence
          Length = 155001

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 285   aaaaggcataattggtttgg 304
             ||||||||||||||||||||
Sbjct: 47621 aaaaggcataattggtttgg 47640
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>gb|AC074176.5|AC074176 Arabidopsis thaliana chromosome 1 BAC T2H7 genomic sequence, complete
            sequence
          Length = 72058

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   ggaatacataatttgatact 92
            ||||||||||||||||||||
Sbjct: 5806 ggaatacataatttgatact 5787
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>gb|AC073506.11|AC073506 Arabidopsis thaliana chromosome 1 BAC F12P21 genomic sequence,
           complete sequence
          Length = 55095

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  ggaatacataatttgatact 92
           ||||||||||||||||||||
Sbjct: 381 ggaatacataatttgatact 400
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>gb|AC099811.7| Homo sapiens chromosome 17, clone RP11-358B23, complete sequence
          Length = 174902

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    tataacttctcctttcttga 376
              ||||||||||||||||||||
Sbjct: 143546 tataacttctcctttcttga 143565
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0470D12
          Length = 157248

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    aatacataatttgatactga 94
             ||||||||||||||||||||
Sbjct: 83812 aatacataatttgatactga 83831
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>gb|AC108443.18| Mus musculus chromosome 7, clone RP23-13J9, complete sequence
          Length = 198138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     ctgactaaccgaatccaaga 110
              ||||||||||||||||||||
Sbjct: 160483 ctgactaaccgaatccaaga 160464
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>gb|U31093.1|XXU31093 Synthetic construct of S. cerevisiae acetylornithine aminotransferase
            (cox3::ARG8m) gene, complete cds
          Length = 2042

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aatacataatttgatactga 94
            ||||||||||||||||||||
Sbjct: 1599 aatacataatttgatactga 1580
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>gb|AC154477.2| Mus musculus BAC clone RP24-134B24 from 14, complete sequence
          Length = 167259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 133    gttccaagtttcagtcatta 152
              ||||||||||||||||||||
Sbjct: 158767 gttccaagtttcagtcatta 158748


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,929,137
Number of Sequences: 3902068
Number of extensions: 3929137
Number of successful extensions: 89809
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89615
Number of HSP's gapped (non-prelim): 194
length of query: 462
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 440
effective length of database: 17,147,199,772
effective search space: 7544767899680
effective search space used: 7544767899680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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