Clone Name | rbasd2d17 |
---|---|
Clone Library Name | barley_pub |
>RL37A_YEAST (P49166) 60S ribosomal protein L37-A (L35) (YP55)| Length = 87 Score = 44.3 bits (103), Expect = 3e-04 Identities = 19/28 (67%), Positives = 22/28 (78%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK*STGGEA 293 SFHVQK TCSSCGYPAA+ R + G +A Sbjct: 25 SFHVQKKTCSSCGYPAAKTRSYNWGAKA 52
>RL37_SCHMA (O44125) 60S ribosomal protein L37| Length = 87 Score = 43.5 bits (101), Expect = 5e-04 Identities = 16/21 (76%), Positives = 20/21 (95%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 S+H+QK TCSSCGYP+AR+RK Sbjct: 25 SYHIQKKTCSSCGYPSARLRK 45
>RL37_CANAL (Q9P836) 60S ribosomal protein L37 (Fragment)| Length = 88 Score = 42.7 bits (99), Expect = 0.001 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 SFHVQK TCSSCGYPAA++R Sbjct: 24 SFHVQKKTCSSCGYPAAKMR 43
>RL37B_SCHPO (P05733) 60S ribosomal protein L37-B (L37-2) (YL27)| Length = 90 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK*STGGEA 293 SFH+QKSTC+ CGYPAA+ R + G +A Sbjct: 25 SFHIQKSTCACCGYPAAKTRSYNWGAKA 52
>RL37A_SCHPO (P59289) 60S ribosomal protein L37-A (L37-1)| Length = 88 Score = 42.4 bits (98), Expect = 0.001 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK*STGGEA 293 SFH+QKSTC+ CGYPAA+ R + G +A Sbjct: 25 SFHIQKSTCACCGYPAAKTRSYNWGAKA 52
>RL37_EMENI (Q9C0T1) 60S ribosomal protein L37| Length = 92 Score = 41.6 bits (96), Expect = 0.002 Identities = 15/21 (71%), Positives = 20/21 (95%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 S+H+QKSTC++CGYPAA+ RK Sbjct: 26 SYHIQKSTCANCGYPAAKTRK 46
>RL37B_YEAST (P51402) 60S ribosomal protein L37-B (L35) (YP55)| Length = 87 Score = 40.8 bits (94), Expect = 0.003 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 SFHVQK TCSSCGYP+A+ R Sbjct: 25 SFHVQKKTCSSCGYPSAKTR 44
>RL371_DROME (Q9VXX8) Probable 60S ribosomal protein L37-A| Length = 93 Score = 40.4 bits (93), Expect = 0.005 Identities = 14/20 (70%), Positives = 19/20 (95%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 S+H+QKSTC+ CGYPAA++R Sbjct: 26 SYHIQKSTCAQCGYPAAKLR 45
>RL37_SPOFR (Q962S7) 60S ribosomal protein L37| Length = 91 Score = 38.1 bits (87), Expect = 0.022 Identities = 13/20 (65%), Positives = 18/20 (90%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 S+H+QKS C+ CGYPAA++R Sbjct: 25 SYHIQKSKCAQCGYPAAKLR 44
>RL37_ARATH (Q43292) 60S ribosomal protein L37| Length = 95 Score = 37.7 bits (86), Expect = 0.029 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 SFH+QKS CS+C YPAAR R Sbjct: 26 SFHIQKSRCSACAYPAARKR 45
>RL37_RAT (P61928) 60S ribosomal protein L37| Length = 96 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++H+QKSTC CGYPA R RK Sbjct: 25 AYHLQKSTCGKCGYPAKRKRK 45
>RL37_MOUSE (Q9D823) 60S ribosomal protein L37| Length = 96 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++H+QKSTC CGYPA R RK Sbjct: 25 AYHLQKSTCGKCGYPAKRKRK 45
>RL37_ICTPU (Q90YT1) 60S ribosomal protein L37| Length = 96 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++H+QKSTC CGYPA R RK Sbjct: 25 AYHLQKSTCGKCGYPAKRKRK 45
>RL37_HUMAN (P61927) 60S ribosomal protein L37 (G1.16)| Length = 96 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++H+QKSTC CGYPA R RK Sbjct: 25 AYHLQKSTCGKCGYPAKRKRK 45
>RL37_BOVIN (P79244) 60S ribosomal protein L37 (Fragment)| Length = 92 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/21 (66%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++H+QKSTC CGYPA R RK Sbjct: 25 AYHLQKSTCGKCGYPAKRKRK 45
>RL372_DROME (Q9W1U6) Probable 60S ribosomal protein L37-B| Length = 89 Score = 37.4 bits (85), Expect = 0.038 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIR 317 S+H+QKS CS CGYPAA+ R Sbjct: 26 SYHLQKSKCSQCGYPAAKTR 45
>RL37_CAEEL (P49622) 60S ribosomal protein L37| Length = 91 Score = 34.3 bits (77), Expect = 0.32 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK*STGGEAI 290 SFH+QK C+SCGY A+ R + G ++I Sbjct: 26 SFHIQKKRCASCGYQDAKKRTYNWGAKSI 54
>RL37_METJA (P54011) 50S ribosomal protein L37e| Length = 61 Score = 31.6 bits (70), Expect = 2.1 Identities = 10/21 (47%), Positives = 17/21 (80%) Frame = -1 Query: 376 SFHVQKSTCSSCGYPAARIRK 314 ++HV+K C++CG+P R+RK Sbjct: 27 AYHVRKKRCAACGFPNKRMRK 47
>RL37_THEVO (Q97BU6) 50S ribosomal protein L37e| Length = 54 Score = 30.4 bits (67), Expect = 4.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 382 HLSFHVQKSTCSSCGYPAARIR 317 H +++V+ CS CG+PA RIR Sbjct: 25 HHTYNVRTKRCSHCGFPAPRIR 46
>RL37_THEAC (Q9HIT7) 50S ribosomal protein L37e| Length = 54 Score = 30.4 bits (67), Expect = 4.7 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = -1 Query: 382 HLSFHVQKSTCSSCGYPAARIR 317 H +++V+ CS CG+PA RIR Sbjct: 25 HHTYNVRTKRCSHCGFPAPRIR 46 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,319,939 Number of Sequences: 219361 Number of extensions: 944205 Number of successful extensions: 2581 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 2536 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2581 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)