ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2d17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468380.1| Oryza sativa (japonica cultivar-group), mRNA Length = 288 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 312 tacttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgg 371 ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||| Sbjct: 140 tacttgcggatgcgggccgcggggtagccgcaggaggagcaggtgctcttctgcaggtgg 81 Query: 372 aagct 376 ||||| Sbjct: 80 aagct 76
>ref|XM_463833.1| Oryza sativa (japonica cultivar-group), mRNA Length = 511 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 312 tacttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgg 371 |||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| Sbjct: 196 tacttgcggatgcgggcggcggggtagccgcaggaggagcaggtgctcttctggaggtgg 137 Query: 372 aagct 376 ||||| Sbjct: 136 aagct 132
>dbj|AK058280.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-C10, full insert sequence Length = 524 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 312 tacttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgg 371 |||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||| Sbjct: 209 tacttgcggatgcgggcggcggggtagccgcaggaggagcaggtgctcttctggaggtgg 150 Query: 372 aagct 376 ||||| Sbjct: 149 aagct 145
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 34936944 acttgcggatgcgggccgcggggtagccgcaggaggagcaggtgctcttctgcaggtgga 34936885 Query: 373 agct 376 |||| Sbjct: 34936884 agct 34936881 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 633863 acttgcggatgcgggcggcggggtagccgcaggaggagcaggtgctcttctggaggtgga 633804 Query: 373 agct 376 |||| Sbjct: 633803 agct 633800 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 528 aaaccctagcctccaagccatcgccgccgccgcc 561 ||||||||||| ||| | |||||||||||||||| Sbjct: 12603239 aaaccctagcccccatgtcatcgccgccgccgcc 12603206 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 ctccaagccatcgccgccgccgcc 561 |||||||||| ||||||||||||| Sbjct: 7568647 ctccaagccaccgccgccgccgcc 7568624 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 1302326 aagccatcgccgccgccgcc 1302345
>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0501G04 Length = 156603 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 ||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||| Sbjct: 111916 acttgcggatgcgggcggcggggtagccgcaggaggagcaggtgctcttctggaggtgga 111857 Query: 373 agct 376 |||| Sbjct: 111856 agct 111853
>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_E04 Length = 118192 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 96441 acttgcggatgcgggccgcggggtagccgcaggaggagcaggtgctcttctgcaggtgga 96382 Query: 373 agct 376 |||| Sbjct: 96381 agct 96378
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 ||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||| Sbjct: 1613161 acttgcggatgcgggcggcggggtaaccgcaggaggagcaggtgctcttctggaggtgga 1613102 Query: 373 agct 376 |||| Sbjct: 1613101 agct 1613098 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 12265525 tcctccgcctcccgccggacgagcccg 12265551
>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1163_G08 Length = 150676 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 ||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||| Sbjct: 140649 acttgcggatgcgggcggcggggtaaccgcaggaggagcaggtgctcttctggaggtgga 140590 Query: 373 agct 376 |||| Sbjct: 140589 agct 140586
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 313 acttgcggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtgga 372 ||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||| Sbjct: 12661 acttgcggatgcgggcggcggggtaaccgcaggaggagcaggtgctcttctggaggtgga 12602 Query: 373 agct 376 |||| Sbjct: 12601 agct 12598
>ref|NM_184141.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1870 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/122 (84%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 191 tcagagtggccatgtttcctgtgccttttgcggtccttcctcttcctgtgtgtttacgat 250 |||||||| || |||||||||||||||||||||||||||||||||| |||| || |||| Sbjct: 1117 tcagagtgaccgtgtttcctgtgccttttgcggtccttcctcttcc--tgtgcttccgat 1060 Query: 251 cactgttgctctctgattcactatcagattctgaggaagaatagcttctcctcctgtgct 310 ||| | || || || ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 1059 caccatcactgtcggaatcactttcagagtctgaggaagaatggcccctccttctgtgct 1000 Query: 311 tt 312 || Sbjct: 999 tt 998
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/122 (84%), Gaps = 2/122 (1%) Strand = Plus / Plus Query: 191 tcagagtggccatgtttcctgtgccttttgcggtccttcctcttcctgtgtgtttacgat 250 |||||||| || |||||||||||||||||||||||||||||||||| |||| || |||| Sbjct: 1168490 tcagagtgaccgtgtttcctgtgccttttgcggtccttcctcttcc--tgtgcttccgat 1168547 Query: 251 cactgttgctctctgattcactatcagattctgaggaagaatagcttctcctcctgtgct 310 ||| | || || || ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 1168548 caccatcactgtcggaatcactttcagagtctgaggaagaatggcccctccttctgtgct 1168607 Query: 311 tt 312 || Sbjct: 1168608 tt 1168609 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ccccaccccaccagaaaccctagc 537 |||||||||||| ||||||||||| Sbjct: 30397048 ccccaccccacccgaaaccctagc 30397025 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 10663622 ccatcgccgccgccgccatc 10663641
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/122 (84%), Gaps = 2/122 (1%) Strand = Plus / Plus Query: 191 tcagagtggccatgtttcctgtgccttttgcggtccttcctcttcctgtgtgtttacgat 250 |||||||| || |||||||||||||||||||||||||||||||||| |||| || |||| Sbjct: 137804 tcagagtgaccgtgtttcctgtgccttttgcggtccttcctcttcc--tgtgcttccgat 137861 Query: 251 cactgttgctctctgattcactatcagattctgaggaagaatagcttctcctcctgtgct 310 ||| | || || || ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 137862 caccatcactgtcggaatcactttcagagtctgaggaagaatggcccctccttctgtgct 137921 Query: 311 tt 312 || Sbjct: 137922 tt 137923
>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684C01 Length = 78600 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/122 (84%), Gaps = 2/122 (1%) Strand = Plus / Plus Query: 191 tcagagtggccatgtttcctgtgccttttgcggtccttcctcttcctgtgtgtttacgat 250 |||||||| || |||||||||||||||||||||||||||||||||| |||| || |||| Sbjct: 22793 tcagagtgaccgtgtttcctgtgccttttgcggtccttcctcttcc--tgtgcttccgat 22850 Query: 251 cactgttgctctctgattcactatcagattctgaggaagaatagcttctcctcctgtgct 310 ||| | || || || ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 22851 caccatcactgtcggaatcactttcagagtctgaggaagaatggcccctccttctgtgct 22910 Query: 311 tt 312 || Sbjct: 22911 tt 22912
>dbj|AK067227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B14, full insert sequence Length = 1873 Score = 85.7 bits (43), Expect = 2e-13 Identities = 103/122 (84%), Gaps = 2/122 (1%) Strand = Plus / Minus Query: 191 tcagagtggccatgtttcctgtgccttttgcggtccttcctcttcctgtgtgtttacgat 250 |||||||| || |||||||||||||||||||||||||||||||||| |||| || |||| Sbjct: 1120 tcagagtgaccgtgtttcctgtgccttttgcggtccttcctcttcc--tgtgcttccgat 1063 Query: 251 cactgttgctctctgattcactatcagattctgaggaagaatagcttctcctcctgtgct 310 ||| | || || || ||||| ||||| ||||||||||||| || ||||| ||||||| Sbjct: 1062 caccatcactgtcggaatcactttcagagtctgaggaagaatggcccctccttctgtgct 1003 Query: 311 tt 312 || Sbjct: 1002 tt 1001
>gb|AY109376.1| Zea mays CL7359_1 mRNA sequence Length = 641 Score = 77.8 bits (39), Expect = 4e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 318 cggatgcgggcggcggggtagccgcacgaggagcaggtgctcttctgcacgtggaagct 376 |||||||||||||||||||| ||||| ||||||||||| |||||||| | ||||||||| Sbjct: 396 cggatgcgggcggcggggtaaccgcaggaggagcaggtactcttctggaggtggaagct 454
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgcctccc 621 |||||||||| |||||||||||| |||||||||| Sbjct: 22034529 acgagctcctcgaggaggtcttcgtccgcctccc 22034562 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 ||||||||||||||||| || |||||||| Sbjct: 22075081 acgagctcctggaggagatcctcctccgc 22075109 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 |||||||||| |||||| ||||||||||| Sbjct: 22071683 acgagctcctcgaggagatcttcctccgc 22071711 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 cgccgccgccgccatcgacaa 569 ||||||||||||||||||||| Sbjct: 2783928 cgccgccgccgccatcgacaa 2783948 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 609 tcctccgcctcccgcgggacgagcccgc 636 |||||||| |||||| |||||||||||| Sbjct: 1083379 tcctccgcatcccgccggacgagcccgc 1083352
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgcctccc 621 |||||||||| |||||||||||| |||||||||| Sbjct: 126573 acgagctcctcgaggaggtcttcgtccgcctccc 126606
>dbj|AK072955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146I19, full insert sequence Length = 1623 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgcctccc 621 |||||||||| |||||||||||| |||||||||| Sbjct: 111 acgagctcctcgaggaggtcttcgtccgcctccc 144
>emb|AL035698.12|HS69B13 Human DNA sequence from clone RP1-69B13 on chromosome 6q24.1-25.2 Contains the 3' end of the GRM1 gene for metabotropic glutamate receptor 1, a phosphoribosyl pyrophosphate synthetase (PRPS1, PRPS2) pseudogene and a CpG island, complete sequence Length = 200317 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Minus Query: 40 aaataaaatgtatattttacttcagtag 67 |||||||| ||||||||||||||||||| Sbjct: 87785 aaataaaaagtatattttacttcagtag 87758
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 548 tcgccgccgccgccatcgacaacg 571 |||||||||||||||||||||||| Sbjct: 4263949 tcgccgccgccgccatcgacaacg 4263926 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgccatcg 565 ||||| |||||||||||||||||| Sbjct: 26697402 aagccctcgccgccgccgccatcg 26697379
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 548 tcgccgccgccgccatcgacaacg 571 |||||||||||||||||||||||| Sbjct: 4263936 tcgccgccgccgccatcgacaacg 4263913 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgccatcg 565 ||||| |||||||||||||||||| Sbjct: 26625571 aagccctcgccgccgccgccatcg 26625548
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104999 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 548 tcgccgccgccgccatcgacaacg 571 |||||||||||||||||||||||| Sbjct: 19834 tcgccgccgccgccatcgacaacg 19857
>ref|NM_119394.3| Arabidopsis thaliana peptidyl-prolyl cis-trans isomerase AT4G32420 mRNA, complete cds Length = 2810 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 772 tctgactcactatcagattctgaggaa 746
>ref|XM_481405.1| Oryza sativa (japonica cultivar-group), mRNA Length = 435 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 80 tcctccgcctcccgccggacgagcccg 106
>gb|BT018454.1| Zea mays clone EL01N0408D11.d mRNA sequence Length = 1429 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 547 atcgccgccgccgccatcgacaacggc 573 |||||||||||||||||| |||||||| Sbjct: 1153 atcgccgccgccgccatctacaacggc 1179
>gb|AY360394.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0070J19, complete sequence Length = 158749 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 128306 tcctccgcctcccgccggacgagcccg 128280
>gb|AY568529.1| Arabidopsis thaliana multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase (CYP95) mRNA, complete cds Length = 2514 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 680 tctgactcactatcagattctgaggaa 654
>gb|AY151289.1|AY151288S2 Danio rerio glial fibrillary acidic protein GFAP gene, exons 2 through 7 Length = 5092 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 37 tgcaaataaaatgtatattttac 59 ||||||||||||||||||||||| Sbjct: 2445 tgcaaataaaatgtatattttac 2467
>gb|AY091023.1| Arabidopsis thaliana unknown protein (At4g32420) mRNA, complete cds Length = 2789 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 772 tctgactcactatcagattctgaggaa 746
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 64179 tctgactcactatcagattctgaggaa 64205
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 50462 tctgactcactatcagattctgaggaa 50488
>emb|BX827665.1|CNS0A4AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2706 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 262 tctgattcactatcagattctgaggaa 288 ||||| ||||||||||||||||||||| Sbjct: 738 tctgactcactatcagattctgaggaa 712
>dbj|AP005819.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0063H21 Length = 188058 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 139017 tcctccgcctcccgccggacgagcccg 139043
>dbj|AP004458.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0045D08 Length = 160541 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 24174 tcctccgcctcccgccggacgagcccg 24200
>dbj|AK107112.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-123-A07, full insert sequence Length = 2287 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccg 635 ||||||||||||||| ||||||||||| Sbjct: 143 tcctccgcctcccgccggacgagcccg 169
>gb|AY110281.1| Zea mays CL27576_1 mRNA sequence Length = 673 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 547 atcgccgccgccgccatcgacaacggc 573 |||||||||||||||||| |||||||| Sbjct: 340 atcgccgccgccgccatctacaacggc 314
>ref|XM_465255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1282 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 528 aaaccctagcctccaagccatcgccgccgccgcc 561 ||||||||||| ||| | |||||||||||||||| Sbjct: 10 aaaccctagcccccatgtcatcgccgccgccgcc 43
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacggc 573 |||||||||||||||||||||| Sbjct: 1707131 cgccgccgccatcgacaacggc 1707152
>ref|XM_871264.1| PREDICTED: Bos taurus similar to CG9853-PA (LOC618954), mRNA Length = 1658 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 402 gccatcgccgccgccgccatcg 381
>gb|AC118606.13| Mus musculus chromosome 5, clone RP24-69F9, complete sequence Length = 208384 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 aaataaaatgtatattttacttcagt 65 ||||||||||| |||||||||||||| Sbjct: 115740 aaataaaatgtttattttacttcagt 115765
>ref|XM_001000641.1| PREDICTED: Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA Length = 1686 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 86 gccatcgccgccgccgccatcg 65
>ref|XM_548720.2| PREDICTED: Canis familiaris similar to CG9853-PA (LOC491599), mRNA Length = 1008 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 123 gccatcgccgccgccgccatcg 102
>emb|CR683246.2|CNS0FQ56 Tetraodon nigroviridis full-length cDNA Length = 1851 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 595 cctggaggaggtcttcctccgcctcc 620 ||||||||||||||||||| |||||| Sbjct: 133 cctggaggaggtcttcctcagcctcc 108
>gb|AY081837.1| Bradyrhizobium japonicum isolate pPM200P9-2 putative amidase AmiC (amiC) gene, partial cds; pyruvate dehydrogenase (poxB), 2-dehydro-3-deoxyphosphogalactonate aldolase (dgoA), 2-dehydro-3-deoxygalactonate kinase (dgoK), putative alkanal monooxygenase (luxA2), HpaC (hpaC), and sigma 54 activator (acoR) genes, complete cds; and unknown genes Length = 8973 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 atcgccgccgccgccatcgaca 568 |||||||||||||||||||||| Sbjct: 5396 atcgccgccgccgccatcgaca 5417
>dbj|AK154897.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110M03 product:hypothetical Leucine-rich repeat/Leucine-rich repeat, typical subtype/Leucine-rich region profile containing protein, full insert sequence Length = 3423 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 63 gccatcgccgccgccgccatcg 42
>gb|BC094573.1| Mus musculus leucine rich repeat containing 47, mRNA (cDNA clone MGC:106431 IMAGE:30354494), complete cds Length = 3407 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 23 gccatcgccgccgccgccatcg 2
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 atcgccgccgccgccatcgaca 568 |||||||||||||||||||||| Sbjct: 8019257 atcgccgccgccgccatcgaca 8019278
>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1134_B09 Length = 105247 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 528 aaaccctagcctccaagccatcgccgccgccgcc 561 ||||||||||| ||| | |||||||||||||||| Sbjct: 298 aaaccctagcccccatgtcatcgccgccgccgcc 265
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete sequences Length = 155513 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 45 aaatgtatattttacttcagta 66 |||||||||||||||||||||| Sbjct: 33647 aaatgtatattttacttcagta 33668
>dbj|AP004798.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572D06 Length = 148920 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 528 aaaccctagcctccaagccatcgccgccgccgcc 561 ||||||||||| ||| | |||||||||||||||| Sbjct: 107772 aaaccctagcccccatgtcatcgccgccgccgcc 107739
>dbj|AK071724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114H08, full insert sequence Length = 1282 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 528 aaaccctagcctccaagccatcgccgccgccgcc 561 ||||||||||| ||| | |||||||||||||||| Sbjct: 10 aaaccctagcccccatgtcatcgccgccgccgcc 43
>emb|AL806525.23| Mouse DNA sequence from clone RP23-254N4 on chromosome 4, complete sequence Length = 209356 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 61075 gccatcgccgccgccgccatcg 61054
>ref|NM_201226.1| Mus musculus leucine rich repeat containing 47 (Lrrc47), mRNA Length = 3395 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatcg 565 |||||||||||||||||||||| Sbjct: 33 gccatcgccgccgccgccatcg 12
>ref|NM_120115.3| Arabidopsis thaliana unknown protein AT4G39550 mRNA, complete cds Length = 1380 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcgacaac 570 |||||||||||| |||||| ||||||||| Sbjct: 83 aagccatcgccgacgccgcaatcgacaac 111
>ref|XM_524315.1| PREDICTED: Pan troglodytes LOC468930 (LOC468930), mRNA Length = 3795 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 153 gccatcgccgccgccgccatc 173
>ref|XM_476664.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 cgccgccgccgccatcgacaa 569 ||||||||||||||||||||| Sbjct: 333 cgccgccgccgccatcgacaa 353
>gb|AY770836.1| Salix burjatica microsatellite SB880 sequence Length = 190 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 ccatcgccgccgccgccatcg 565 ||||||||||||||||||||| Sbjct: 153 ccatcgccgccgccgccatcg 133
>gb|AY022827.1| Oryza sativa microsatellite MRG5152 containing (CGC)X9, genomic sequence Length = 227 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 ||||||||||||||||| || |||||||| Sbjct: 197 acgagctcctggaggagatcctcctccgc 225
>ref|XM_755827.1| Ustilago maydis 521 hypothetical protein (UM04773.1) partial mRNA Length = 6198 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 559 gccatcgacaacggcaccgtcgctg 583 ||||||||||||| ||||||||||| Sbjct: 1777 gccatcgacaacgtcaccgtcgctg 1801
>gb|AC092022.5| Homo sapiens BAC clone RP11-750F10 from 7, complete sequence Length = 170141 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 taaaatgtatattttacttca 63 ||||||||||||||||||||| Sbjct: 3634 taaaatgtatattttacttca 3654
>emb|AL356234.18| Human DNA sequence from clone RP11-95M15 on chromosome 6 Contains a novel gene and a protein tyrosine phosphatase non-receptor type 11 (Nooan syndrome) (PTPN11) pseudogene, complete sequence Length = 115224 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 tccttcctcttcctgtgtgtttacg 248 |||||||||||||||||||| |||| Sbjct: 110878 tccttcctcttcctgtgtgtatacg 110854
>emb|AL161595.2|ATCHRIV91 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 91 Length = 198151 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgccatcgacaac 570 |||||||||||| |||||| ||||||||| Sbjct: 101993 aagccatcgccgacgccgcaatcgacaac 101965
>emb|AL078620.2|ATF23K16 Arabidopsis thaliana DNA chromosome 4, BAC clone F23K16 (ESSA project) Length = 129047 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgccatcgacaac 570 |||||||||||| |||||| ||||||||| Sbjct: 76779 aagccatcgccgacgccgcaatcgacaac 76751
>gb|BC086662.1| Mus musculus DNA segment, Chr 15, Brigham & Women's Genetics 0759 expressed, mRNA (cDNA clone MGC:113773 IMAGE:30549783), complete cds Length = 4755 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 4711 aaatgtattttttatttcagtagcatata 4683
>dbj|AB028987.2| Homo sapiens mRNA for KIAA1064 protein, partial cds Length = 6115 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 92 gccatcgccgccgccgccatc 112
>emb|CR627153.1| Homo sapiens mRNA; cDNA DKFZp686F24225 (from clone DKFZp686F24225) Length = 4881 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 tacttcagtagcatatacaat 77 ||||||||||||||||||||| Sbjct: 2781 tacttcagtagcatatacaat 2761
>gb|AE011859.1| Xanthomonas axonopodis pv. citri str. 306, section 237 of 469 of the complete genome Length = 10461 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 570 cggcaccgtcgctgccgcacg 590 ||||||||||||||||||||| Sbjct: 3526 cggcaccgtcgctgccgcacg 3546
>dbj|AK140027.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230103I24 product:similar to DJ1119A7.5.2 (Novel protein (Variant 2)) (Fragment) [Homo sapiens], full insert sequence Length = 4747 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 4741 aaatgtattttttatttcagtagcatata 4713
>ref|XM_942694.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 4 (C19orf7), mRNA Length = 6107 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 86 gccatcgccgccgccgccatc 106
>ref|XM_028253.5| PREDICTED: Homo sapiens chromosome 19 open reading frame 7, transcript variant 1 (C19orf7), mRNA Length = 6107 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 86 gccatcgccgccgccgccatc 106
>dbj|AK171308.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630330B03 product:weakly similar to DJ1119A7.5.1 (Novel protein (Variant 1)) (Fragment) [Homo sapiens], full insert sequence Length = 3176 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 3170 aaatgtattttttatttcagtagcatata 3142
>emb|BX511023.8| Zebrafish DNA sequence from clone DKEY-148A12 in linkage group 2, complete sequence Length = 244788 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 gcaaataaaatgtatatttta 58 ||||||||||||||||||||| Sbjct: 165264 gcaaataaaatgtatatttta 165284
>dbj|AK089177.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630005K14 product:hypothetical protein, full insert sequence Length = 3176 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 3166 aaatgtattttttatttcagtagcatata 3138
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone BACR08I18, complete sequence Length = 160650 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 attgcaaataaaatgtatatt 55 ||||||||||||||||||||| Sbjct: 113940 attgcaaataaaatgtatatt 113920
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcga 566 ||||||||||||||||||||| Sbjct: 29240226 catcgccgccgccgccatcga 29240246 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 5079082 aagccatcgccgccgccgcc 5079063
>emb|BX828255.1|CNS0A3WX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1360 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcgacaac 570 |||||||||||| |||||| ||||||||| Sbjct: 61 aagccatcgccgacgccgcaatcgacaac 89
>gb|AC008755.8| Homo sapiens chromosome 19 clone CTD-3026N16, complete sequence Length = 203912 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 139362 gccatcgccgccgccgccatc 139342
>gb|AC006466.3|AC006466 Homo sapiens BAC clone CTA-471E18 from 7p11.2-p21, complete sequence Length = 156880 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 aaataaaatgtatattttact 60 ||||||||||||||||||||| Sbjct: 110390 aaataaaatgtatattttact 110410
>gb|BT003146.1| Arabidopsis thaliana At4g39550 mRNA, complete cds Length = 1179 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcgacaac 570 |||||||||||| |||||| ||||||||| Sbjct: 37 aagccatcgccgacgccgcaatcgacaac 65
>gb|AC112485.4| Homo sapiens 3 BAC RP11-776B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168500 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 57 tacttcagtagcatatacaat 77 ||||||||||||||||||||| Sbjct: 5623 tacttcagtagcatatacaat 5643
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcga 566 ||||||||||||||||||||| Sbjct: 3024 catcgccgccgccgccatcga 3044
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 cgccgccgccgccatcgacaa 569 ||||||||||||||||||||| Sbjct: 87489 cgccgccgccgccatcgacaa 87509
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 ||||||||||||||||| || |||||||| Sbjct: 28737 acgagctcctggaggagatcctcctccgc 28765 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 |||||||||| |||||| ||||||||||| Sbjct: 25339 acgagctcctcgaggagatcttcctccgc 25367
>dbj|AK106624.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B05, full insert sequence Length = 2706 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 |||||||||| |||||| ||||||||||| Sbjct: 45 acgagctcctcgaggagatcttcctccgc 73
>dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G10, full insert sequence Length = 1447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcga 566 ||||||||||||||||||||| Sbjct: 1197 catcgccgccgccgccatcga 1217
>emb|AJ328742.1|HSA328742 Homo sapiens genomic sequence surrounding NotI site, clone NR1-NP8R Length = 673 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccatc 564 ||||||||||||||||||||| Sbjct: 181 gccatcgccgccgccgccatc 161
>dbj|AK070977.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072E20, full insert sequence Length = 1898 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 588 acgagctcctggaggaggtcttcctccgc 616 ||||||||||||||||| || |||||||| Sbjct: 160 acgagctcctggaggagatcctcctccgc 188
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 549 cgccgccgccgccatcgacaa 569 ||||||||||||||||||||| Sbjct: 90939 cgccgccgccgccatcgacaa 90959
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete sequence Length = 306854 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 attgcaaataaaatgtatatt 55 ||||||||||||||||||||| Sbjct: 146230 attgcaaataaaatgtatatt 146210
>ref|NM_001017983.1| Mus musculus DNA segment, Chr 15, Brigham & Women's Genetics 0759 expressed (D15Bwg0759e), mRNA Length = 4738 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 4694 aaatgtattttttatttcagtagcatata 4666
>emb|AL589650.20| Mouse DNA sequence from clone RP23-81H23 on chromosome 15, complete sequence Length = 197660 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 197106 aaatgtattttttatttcagtagcatata 197078
>emb|AL583886.11| Mouse DNA sequence from clone RP23-402G11 on chromosome 15, complete sequence Length = 198994 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcagtagcatata 73 |||||||| ||||| |||||||||||||| Sbjct: 1446 aaatgtattttttatttcagtagcatata 1418
>gb|AY854820.1| Drosophila americana strain G96.48 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacg 571 |||||||||||||||||||| Sbjct: 827 cgccgccgccatcgacaacg 846
>gb|AY854819.1| Drosophila americana strain G96.47 corkscrew (csw) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacg 571 |||||||||||||||||||| Sbjct: 836 cgccgccgccatcgacaacg 855
>gb|AY854818.1| Drosophila americana strain G96.45 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacg 571 |||||||||||||||||||| Sbjct: 827 cgccgccgccatcgacaacg 846
>gb|AY854817.1| Drosophila americana strain G96.31 corkscrew (csw) gene, partial cds Length = 1138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacg 571 |||||||||||||||||||| Sbjct: 836 cgccgccgccatcgacaacg 855
>gb|AY854816.1| Drosophila americana strain G96.11 corkscrew (csw) gene, partial cds Length = 1129 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 cgccgccgccatcgacaacg 571 |||||||||||||||||||| Sbjct: 827 cgccgccgccatcgacaacg 846
>ref|NM_112535.2| Arabidopsis thaliana ATTOC120; protein translocase AT3G16620 (ATTOC120) mRNA, complete cds Length = 3321 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 atcagattctgaggaagaat 292 |||||||||||||||||||| Sbjct: 2229 atcagattctgaggaagaat 2248
>ref|NM_183626.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 826 ccatcgccgccgccgccatc 807
>gb|AC111134.10| Mus musculus chromosome 3, clone RP23-349J3, complete sequence Length = 223171 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 gaggctcctttctcctcgga 507 |||||||||||||||||||| Sbjct: 120538 gaggctcctttctcctcgga 120557
>ref|XM_508342.1| PREDICTED: Pan troglodytes similar to chromobox homolog 3; heterochromatin protein HP1 gamma; HP1 gamma homolog; heterochromatin-like protein 1; chromobox homolog 3 (Drosophila HP1 gamma) (LOC451092), mRNA Length = 654 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 acaatgtatattttcttcagattc 101 |||||||| ||||||||||||||| Sbjct: 360 acaatgtaaattttcttcagattc 337
>ref|XM_474971.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2541 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 1058 aagccatcgccgccgccgcc 1039
>ref|NM_194763.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0013J21.22), mRNA Length = 1434 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 265 ctggaggagatcttcctccgcctc 288
>ref|XM_463951.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1161 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 54 aagccatcgccgccgccgcc 73
>ref|XM_463208.1| Oryza sativa (japonica cultivar-group), mRNA Length = 291 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 174 catcgccgccgccgccatcg 155
>ref|NM_194191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 609 tcctccgcctcccgcgggacgagcccgc 636 |||||||| |||||| |||||||||||| Sbjct: 47 tcctccgcatcccgccggacgagcccgc 74
>ref|XM_472969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1389 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 20 gccatcgccgccgccgccat 1
>ref|NM_173397.2| Mus musculus RIKEN cDNA D930001I22 gene (D930001I22Rik), mRNA Length = 3517 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 3397 tgcacgtggaagctcagatg 3378
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 agccatcgccgccgccgcca 562 |||||||||||||||||||| Sbjct: 1579458 agccatcgccgccgccgcca 1579477
>gb|AF153203.1| Lilium longiflorum meiotin-1 (M1) gene, M1-1 allele, promoter region and partial cds Length = 1898 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ccaccccaccagaaacccta 535 |||||||||||||||||||| Sbjct: 1036 ccaccccaccagaaacccta 1055
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 142746 ctggaggagatcttcctccgcctc 142769
>gb|AC161260.2| Mus musculus BAC clone RP23-448A11 from chromosome 9, complete sequence Length = 190608 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 atattttacttcagtagcat 70 |||||||||||||||||||| Sbjct: 33100 atattttacttcagtagcat 33119
>gb|AE009164.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 190 of 256 of the complete sequence Length = 10069 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 1731 ccatcgccgccgccgccatc 1750
>gb|AC090437.62| Mus musculus strain C57BL/6J clone rp23-11f20 map 6, complete sequence Length = 227127 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 27839 tgcacgtggaagctcagatg 27820
>gb|AY587019.1| Arabidopsis thaliana chloroplast outer envelope membrane-associated protein Toc120 mRNA, complete cds; nuclear gene for chloroplast product Length = 3270 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 atcagattctgaggaagaat 292 |||||||||||||||||||| Sbjct: 2178 atcagattctgaggaagaat 2197
>gb|AC120855.9| Mus musculus chromosome 18, clone RP23-270P23, complete sequence Length = 226294 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tatacaatacaatgtatatt 89 |||||||||||||||||||| Sbjct: 92102 tatacaatacaatgtatatt 92083
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 23427499 catcgccgccgccgccatcg 23427518
>gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complete sequence Length = 143250 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 519 ccccaccagaaaccctagcc 538 |||||||||||||||||||| Sbjct: 105960 ccccaccagaaaccctagcc 105979
>gb|AC145549.3| Mus musculus BAC clone RP23-21M23 from chromosome 19, complete sequence Length = 247655 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggtccttcctcttcctgtgt 241 |||||||||||||||||||| Sbjct: 32996 ggtccttcctcttcctgtgt 33015
>gb|AC132957.3| Mus musculus BAC clone RP23-149E9 from chromosome 19, complete sequence Length = 246177 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggtccttcctcttcctgtgt 241 |||||||||||||||||||| Sbjct: 93203 ggtccttcctcttcctgtgt 93222
>ref|XM_838411.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1328) partial mRNA Length = 2391 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 agccatcgccgccgccgcca 562 |||||||||||||||||||| Sbjct: 788 agccatcgccgccgccgcca 807
>ref|XM_752332.1| Ustilago maydis 521 hypothetical protein (UM01278.1) partial mRNA Length = 3588 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 534 tagcctccaagccatcgccgccgccgcc 561 ||||||||| |||| ||||||||||||| Sbjct: 3394 tagcctccacgccaccgccgccgccgcc 3367
>gb|AC125084.4| Mus musculus BAC clone RP24-100F10 from chromosome 18, complete sequence Length = 170040 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 tatacaatacaatgtatatt 89 |||||||||||||||||||| Sbjct: 360 tatacaatacaatgtatatt 341
>gb|AC124757.4| Mus musculus BAC clone RP23-116P5 from 8, complete sequence Length = 210427 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 aaaagtcagagtggccatgt 205 |||||||||||||||||||| Sbjct: 63761 aaaagtcagagtggccatgt 63780
>gb|AC112943.12| Mus musculus chromosome 16, clone RP23-424C7, complete sequence Length = 219990 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 agagtctgaatacctcctct 154 |||||||||||||||||||| Sbjct: 68312 agagtctgaatacctcctct 68331
>ref|XM_727069.1| Plasmodium chabaudi chabaudi hypothetical protein (PC102048.00.0) partial mRNA Length = 318 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 84 tatattttcttcagattcactatt 107 ||||||||||||||||||| |||| Sbjct: 186 tatattttcttcagattcattatt 163
>emb|BX571952.13| Zebrafish DNA sequence from clone DKEY-35E8 in linkage group 11, complete sequence Length = 175925 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 aaataaaatgtatattttac 59 |||||||||||||||||||| Sbjct: 151853 aaataaaatgtatattttac 151872
>emb|AL593854.6| Human DNA sequence from clone RP11-423B13 on chromosome 6 Contains the 5' part of a novel gene, complete sequence Length = 166869 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 atagtcatctattgattgcaaata 44 |||||||||||||||||| ||||| Sbjct: 150942 atagtcatctattgattggaaata 150919
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 cgccgccatcgacaacggca 574 |||||||||||||||||||| Sbjct: 337223 cgccgccatcgacaacggca 337204
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 17767 gccatcgccgccgccgccat 17748
>emb|AL358174.12| Human DNA sequence from clone RP11-387H19 on chromosome Xq27.1-28, complete sequence Length = 96743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tgctctctgattcactatca 276 |||||||||||||||||||| Sbjct: 7291 tgctctctgattcactatca 7310
>emb|AL355382.6| Human DNA sequence from clone RP11-408C8 on chromosome 6, complete sequence Length = 141756 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgcaaataaaatgtatattt 56 |||||||||||||||||||| Sbjct: 55716 tgcaaataaaatgtatattt 55697
>ref|XM_969726.1| PREDICTED: Tribolium castaneum similar to CG4272-PA, isoform A (LOC663690), mRNA Length = 2457 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tcgctgtcactctcatcact 134 |||||||||||||||||||| Sbjct: 1187 tcgctgtcactctcatcact 1168
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 2164606 ctggaggagatcttcctccgcctc 2164629
>emb|Z98601.1|SPAC24C9 S.pombe chromosome I cosmid c24C9 Length = 38666 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tagcatatacaatacaatgt 84 |||||||||||||||||||| Sbjct: 25582 tagcatatacaatacaatgt 25563
>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence Length = 211799 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 acaatgtatattttcttcagattc 101 |||||||| ||||||||||||||| Sbjct: 110113 acaatgtaaattttcttcagattc 110090
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 cgccgccgccgccatcgaca 568 |||||||||||||||||||| Sbjct: 688816 cgccgccgccgccatcgaca 688835
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 aaataaaatgtatattttac 59 |||||||||||||||||||| Sbjct: 2425107 aaataaaatgtatattttac 2425126
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 gtctgaatacctcctctttg 157 |||||||||||||||||||| Sbjct: 2036 gtctgaatacctcctctttg 2017
>emb|AL662993.3|OSJN00195 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015G09, complete sequence Length = 123375 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 46316 aagccatcgccgccgccgcc 46335
>emb|AL592551.10| Mouse DNA sequence from clone RP23-12I13 on chromosome 11, complete sequence Length = 215657 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 514 ccccaccccaccagaaaccc 533 |||||||||||||||||||| Sbjct: 79739 ccccaccccaccagaaaccc 79758
>emb|AL662946.2|OSJN00139 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991113_30, complete sequence Length = 141128 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 109936 gccatcgccgccgccgccat 109955
>gb|AC122176.2| Homo sapiens chromosome 3 clone RP11-294O18, complete sequence Length = 176367 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 atgtatattttacttcagta 66 |||||||||||||||||||| Sbjct: 128664 atgtatattttacttcagta 128645
>emb|BX649484.12| Zebrafish DNA sequence from clone CH211-197H24 in linkage group 16, complete sequence Length = 196058 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 ttctgcacgtggaagctcagatga 383 ||||||| |||||||||||||||| Sbjct: 29870 ttctgcatgtggaagctcagatga 29847
>emb|BX548000.6| Zebrafish DNA sequence from clone CH211-199M8 in linkage group 11, complete sequence Length = 216767 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 attgcaaataaaatgtatatttta 58 |||||||||||||||||| ||||| Sbjct: 21402 attgcaaataaaatgtatgtttta 21379
>gb|AC104982.7| Homo sapiens chromosome 17, clone RP11-338L22, complete sequence Length = 164107 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atgtatattttacttcagta 66 |||||||||||||||||||| Sbjct: 9059 atgtatattttacttcagta 9078
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 atcgccgccgccgccatcga 566 |||||||||||||||||||| Sbjct: 5209747 atcgccgccgccgccatcga 5209766
>dbj|AK122852.1| Homo sapiens cDNA FLJ16472 fis, clone BRHIP3017637 Length = 3676 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 aatacaatgtatattttcttcaga 98 |||||||||| ||||||||||||| Sbjct: 1400 aatacaatgtttattttcttcaga 1377
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 1422158 ccatcgccgccgccgccatc 1422177
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 2103107 ccatcgccgccgccgccatc 2103126
>gb|AC093783.2| Homo sapiens BAC clone RP11-209D20 from 4, complete sequence Length = 121709 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 aatacaatgtatattttcttcaga 98 |||||||||| ||||||||||||| Sbjct: 110476 aatacaatgtttattttcttcaga 110499
>gb|U21310.1| Caenorhabditis elegans cosmid F40H6, complete sequence Length = 32481 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ttgcaaataaaatgtatatt 55 |||||||||||||||||||| Sbjct: 16957 ttgcaaataaaatgtatatt 16938
>gb|AF394196.1|AF394196 Simian adenovirus 25, complete genome Length = 36521 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 13968 catcgccgccgccgccatcg 13949
>ref|XM_685771.1| PREDICTED: Danio rerio similar to nascent polypeptide-associated complex alpha polypeptide (LOC562388), mRNA Length = 5778 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 360 ttctgcacgtggaagctcagatga 383 ||||||| |||||||||||||||| Sbjct: 2243 ttctgcatgtggaagctcagatga 2220
>gb|AC093114.2| Homo sapiens chromosome 3 clone RP11-339O5, complete sequence Length = 167241 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atgtatattttacttcagta 66 |||||||||||||||||||| Sbjct: 141040 atgtatattttacttcagta 141059
>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence Length = 156514 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 cttgcggatgcgggcggcgg 333 |||||||||||||||||||| Sbjct: 93209 cttgcggatgcgggcggcgg 93228
>ref|XM_625676.1| Cryptosporidium parvum Iowa II putative nucleosome assembly protein 19075338; besthit Py 23481872 (cgd4_720), partial mRNA Length = 1044 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tctgattcactatcagattc 281 |||||||||||||||||||| Sbjct: 911 tctgattcactatcagattc 892
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 4092049 catcgccgccgccgccatcg 4092068
>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence Length = 220855 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tccttcctcttcctgtgtgt 243 |||||||||||||||||||| Sbjct: 83736 tccttcctcttcctgtgtgt 83755
>dbj|AK046581.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430109A22 product:unclassifiable, full insert sequence Length = 2602 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 2488 tgcacgtggaagctcagatg 2469
>ref|NM_001019459.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC24C9.09), partial mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tagcatatacaatacaatgt 84 |||||||||||||||||||| Sbjct: 463 tagcatatacaatacaatgt 444
>gb|AF063304.1|AF063304 Homo sapiens HP1-Hs-gamma pseudogene, complete sequence Length = 1399 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 acaatgtatattttcttcagattc 101 |||||||| ||||||||||||||| Sbjct: 743 acaatgtaaattttcttcagattc 720
>ref|NG_001315.1| Homo sapiens chromobox homolog 3 gamma pseudogene (LOC159770) on chromosome 11 Length = 1399 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 78 acaatgtatattttcttcagattc 101 |||||||| ||||||||||||||| Sbjct: 743 acaatgtaaattttcttcagattc 720
>dbj|AK052945.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930001I22 product:hypothetical protein, full insert sequence Length = 3934 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 3830 tgcacgtggaagctcagatg 3811
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 24393525 gccatcgccgccgccgccat 24393544 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 8432941 aagccatcgccgccgccgcc 8432960
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 5961684 gccatcgccgccgccgccat 5961665
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 2164606 ctggaggagatcttcctccgcctc 2164629
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 23420527 catcgccgccgccgccatcg 23420546
>dbj|AP002482.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0706B05 Length = 187835 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 158245 ccatcgccgccgccgccatc 158264
>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435H01 Length = 160141 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ccccaccccaccagaaaccctagc 537 |||||||||||| ||||||||||| Sbjct: 25311 ccccaccccacccgaaaccctagc 25288
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 514 ccccaccccaccagaaaccctagc 537 |||||||||||| ||||||||||| Sbjct: 82775 ccccaccccacccgaaaccctagc 82752
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 110155 catcgccgccgccgccatcg 110174
>emb|BX324157.4| Zebrafish DNA sequence from clone DKEY-15N1 in linkage group 3, complete sequence Length = 272769 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 tgcaaataaaatgtatattt 56 |||||||||||||||||||| Sbjct: 213268 tgcaaataaaatgtatattt 213287
>dbj|AP003946.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1147_D11 Length = 138444 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 38120 aagccatcgccgccgccgcc 38101
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 547 atcgccgccgccgccatcgacaacggca 574 |||||||||| ||||||||||| ||||| Sbjct: 532866 atcgccgccgacgccatcgacatcggca 532839
>dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0575F10 Length = 150462 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 133417 aagccatcgccgccgccgcc 133436
>dbj|AP006056.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1172G12 Length = 171974 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 121196 aagccatcgccgccgccgcc 121177
>dbj|AP004070.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1705_E12 Length = 191416 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 ctccaagccatcgccgccgccgcc 561 |||||||||| ||||||||||||| Sbjct: 162353 ctccaagccaccgccgccgccgcc 162330
>gb|BC090994.1| Mus musculus RIKEN cDNA D930001I22 gene, mRNA (cDNA clone MGC:107602 IMAGE:6750721), complete cds Length = 3517 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 3397 tgcacgtggaagctcagatg 3378
>dbj|AP006754.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0018H03, complete sequence Length = 94450 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 76355 aagccatcgccgccgccgcc 76374
>dbj|AB022217.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MGL6 Length = 79459 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 atcagattctgaggaagaat 292 |||||||||||||||||||| Sbjct: 25611 atcagattctgaggaagaat 25592
>dbj|AK119282.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-C07, full insert sequence Length = 2708 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 1169 aagccatcgccgccgccgcc 1150
>dbj|AK107931.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-A02, full insert sequence Length = 641 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 199 catcgccgccgccgccatcg 180
>dbj|AK107389.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C10, full insert sequence Length = 1494 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcg 565 ||||| |||||||||||||||||| Sbjct: 809 aagccctcgccgccgccgccatcg 832
>dbj|AK106850.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A11, full insert sequence Length = 1617 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 545 ccatcgccgccgccgccatc 564 |||||||||||||||||||| Sbjct: 1048 ccatcgccgccgccgccatc 1029
>dbj|AK105873.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B05, full insert sequence Length = 1161 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgcc 561 |||||||||||||||||||| Sbjct: 54 aagccatcgccgccgccgcc 73
>dbj|AK104961.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-H12, full insert sequence Length = 1943 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 278 ctggaggagatcttcctccgcctc 301
>dbj|AK072221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013166C23, full insert sequence Length = 1994 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 307 ctggaggagatcttcctccgcctc 330
>dbj|AK067266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098C22, full insert sequence Length = 1984 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 129 gccatcgccgccgccgccat 110
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 609 tcctccgcctcccgcgggacgagcccgc 636 |||||||| |||||| |||||||||||| Sbjct: 80967 tcctccgcatcccgccggacgagcccgc 80940
>emb|CT806423.2| Pan troglodytes chromosome X clone CH251-25B01 map Xq28, complete sequence Length = 220032 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 tgctctctgattcactatca 276 |||||||||||||||||||| Sbjct: 16163 tgctctctgattcactatca 16182
>gb|DQ019637.1| Triticum aestivum mRNA transport factor (Y14) mRNA, complete cds Length = 978 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 catcgccgccgccgccatcg 565 |||||||||||||||||||| Sbjct: 79 catcgccgccgccgccatcg 60
>dbj|AP002088.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1024H10 Length = 175946 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaatgtatattttacttcag 64 |||||||||||||||||||| Sbjct: 34045 aaatgtatattttacttcag 34026
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 caaataaaatgtatatttta 58 |||||||||||||||||||| Sbjct: 197750 caaataaaatgtatatttta 197769
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 ccgccgccatcgacaacggc 573 |||||||||||||||||||| Sbjct: 893330 ccgccgccatcgacaacggc 893349
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 596 ctggaggaggtcttcctccgcctc 619 ||||||||| |||||||||||||| Sbjct: 2164557 ctggaggagatcttcctccgcctc 2164580
>emb|CT010508.10| Mouse DNA sequence from clone RP23-250G8 on chromosome 9, complete sequence Length = 223547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 atattttacttcagtagcat 70 |||||||||||||||||||| Sbjct: 86684 atattttacttcagtagcat 86665
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 gccatcgccgccgccgccat 563 |||||||||||||||||||| Sbjct: 6028161 gccatcgccgccgccgccat 6028142
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcg 565 ||||| |||||||||||||||||| Sbjct: 73725 aagccctcgccgccgccgccatcg 73748
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 542 aagccatcgccgccgccgccatcg 565 ||||| |||||||||||||||||| Sbjct: 101576 aagccctcgccgccgccgccatcg 101599
>emb|AL591488.7| Mouse DNA sequence from clone RP23-36P22 on chromosome 2, complete sequence Length = 191494 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tgcacgtggaagctcagatg 382 |||||||||||||||||||| Sbjct: 31778 tgcacgtggaagctcagatg 31797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,513,283 Number of Sequences: 3902068 Number of extensions: 7513283 Number of successful extensions: 214133 Number of sequences better than 10.0: 202 Number of HSP's better than 10.0 without gapping: 213 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 207855 Number of HSP's gapped (non-prelim): 6278 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
