Clone Name | rbasd1o14 |
---|---|
Clone Library Name | barley_pub |
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328385 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 328444 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328445 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 328504 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328505 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 328564 Query: 494 gattcgcg 501 |||||||| Sbjct: 328565 gattcgcg 328572 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 383 acgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacgacag 442 ||||||||| |||||||| ||||| ||| |||| || ||| |||||||||||||||| Sbjct: 420422 acgagggtttcgctcgttataggacttgaccaaacatctcacgacacgagctgacgacag 420481 Query: 443 ccatgcaccacctgt 457 ||||||| ||||||| Sbjct: 420482 ccatgcagcacctgt 420496
>gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, partial sequence; chloroplast Length = 812 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 356 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 415 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 475 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 476 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 535 Query: 494 gattcgcg 501 |||||||| Sbjct: 536 gattcgcg 543
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122714 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122773 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122774 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122833 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122834 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122893 Query: 494 gattcgcg 501 |||||||| Sbjct: 122894 gattcgcg 122901 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92442 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92383 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92382 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92323 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92322 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92263 Query: 494 gattcgcg 501 |||||||| Sbjct: 92262 gattcgcg 92255
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122714 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122773 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122774 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122833 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122834 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122893 Query: 494 gattcgcg 501 |||||||| Sbjct: 122894 gattcgcg 122901 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92442 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92383 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92382 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92323 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92322 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92263 Query: 494 gattcgcg 501 |||||||| Sbjct: 92262 gattcgcg 92255
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122663 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122722 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122723 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122782 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122783 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122842 Query: 494 gattcgcg 501 |||||||| Sbjct: 122843 gattcgcg 122850 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92387 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92328 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92327 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92268 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92267 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92208 Query: 494 gattcgcg 501 |||||||| Sbjct: 92207 gattcgcg 92200
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126441 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 126500 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126501 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 126560 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126561 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 126620 Query: 494 gattcgcg 501 |||||||| Sbjct: 126621 gattcgcg 126628 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96296 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 96237 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 96177 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 96117 Query: 494 gattcgcg 501 |||||||| Sbjct: 96116 gattcgcg 96109
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122684 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122743 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122744 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122803 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122804 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122863 Query: 494 gattcgcg 501 |||||||| Sbjct: 122864 gattcgcg 122871 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92434 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92375 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92315 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92314 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92255 Query: 494 gattcgcg 501 |||||||| Sbjct: 92254 gattcgcg 92247
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119487 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 119428 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119427 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 119368 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119367 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 119308 Query: 494 gattcgcg 501 |||||||| Sbjct: 119307 gattcgcg 119300 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87612 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 87553 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87552 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 87493 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87492 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 87433 Query: 494 gattcgcg 501 |||||||| Sbjct: 87432 gattcgcg 87425 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11209 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 11150 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11149 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 11090 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11089 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 11030 Query: 494 gattcgcg 501 |||||||| Sbjct: 11029 gattcgcg 11022
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138017 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 137958 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137957 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 137898 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137897 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 137838 Query: 494 gattcgcg 501 |||||||| Sbjct: 137837 gattcgcg 137830
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90625 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 90566 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90565 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 90506 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90505 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 90446 Query: 494 gattcgcg 501 |||||||| Sbjct: 90445 gattcgcg 90438
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47671 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 47730 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47731 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 47790 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47791 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 47850 Query: 494 gattcgcg 501 |||||||| Sbjct: 47851 gattcgcg 47858 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17447 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 17388 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17387 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 17328 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17327 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 17268 Query: 494 gattcgcg 501 |||||||| Sbjct: 17267 gattcgcg 17260
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61408 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 61467 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61468 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 61527 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61528 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 61587 Query: 494 gattcgcg 501 |||||||| Sbjct: 61588 gattcgcg 61595
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24689 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 24630 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24629 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 24570 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24569 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 24510 Query: 494 gattcgcg 501 |||||||| Sbjct: 24509 gattcgcg 24502
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265367 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9265308 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265307 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9265248 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265247 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9265188 Query: 494 gattcgcg 501 |||||||| Sbjct: 9265187 gattcgcg 9265180 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224867 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9224808 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224807 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9224748 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224747 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9224688 Query: 494 gattcgcg 501 |||||||| Sbjct: 9224687 gattcgcg 9224680 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206539 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9206480 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206479 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9206420 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206419 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9206360 Query: 494 gattcgcg 501 |||||||| Sbjct: 9206359 gattcgcg 9206352 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161461 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9161402 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161401 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9161342 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161341 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9161282 Query: 494 gattcgcg 501 |||||||| Sbjct: 9161281 gattcgcg 9161274 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129586 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9129527 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129526 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9129467 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129466 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9129407 Query: 494 gattcgcg 501 |||||||| Sbjct: 9129406 gattcgcg 9129399 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053283 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 9053224 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053223 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9053164 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053163 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9053104 Query: 494 gattcgcg 501 |||||||| Sbjct: 9053103 gattcgcg 9053096 Score = 351 bits (177), Expect = 1e-93 Identities = 183/185 (98%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23619121 atcctctccttcctccggcttaacaccggcggtctgtttagggttccaaactcatagtgg 23619180 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23619181 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 23619240 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 23619241 tgacgacagccatgcaccacctgtgttcgcgttcccgagggcacccctctctttcaagag 23619300 Query: 494 gattc 498 ||||| Sbjct: 23619301 gattc 23619305
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935354 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 19935295 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935294 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 19935235 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935234 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 19935175 Query: 494 gattcgcg 501 |||||||| Sbjct: 19935174 gattcgcg 19935167 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384233 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 10384174 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384173 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 10384114 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384113 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 10384054 Query: 494 gattcgcg 501 |||||||| Sbjct: 10384053 gattcgcg 10384046 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280083 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 10280142 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280143 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 10280202 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280203 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 10280262 Query: 494 gattcgcg 501 |||||||| Sbjct: 10280263 gattcgcg 10280270
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179330 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 14179389 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179390 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 14179449 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179450 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 14179509 Query: 494 gattcgcg 501 |||||||| Sbjct: 14179510 gattcgcg 14179517
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346627 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 14346568 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346567 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 14346508 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346507 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 14346448 Query: 494 gattcgcg 501 |||||||| Sbjct: 14346447 gattcgcg 14346440 Score = 341 bits (172), Expect = 1e-90 Identities = 184/188 (97%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 807934 atcctctacttcctccggcttaacaccggcgggctgttcagggttccaaactcatagtgg 807993 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807994 caacttaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 808053 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 808054 tgacgacagccatgcaccacttgtgtccgcgttcccgagggcacccctctctttcaagag 808113 Query: 494 gattcgcg 501 |||||||| Sbjct: 808114 gattcgcg 808121 Score = 218 bits (110), Expect = 1e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 11195121 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcataatgg 11195062 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||| ||| |||||||| |||||||||||||| |||||||||||| ||||||| Sbjct: 11195061 caactaaacatgagtgttgcgcttgttgcgagacttaaaccaacaccttacaacacgagc 11195002 Query: 434 tgacgacagccatgcaccacct 455 |||||||| ||||||||||||| Sbjct: 11195001 tgacgacaaccatgcaccacct 11194980
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50689 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 50748 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50749 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 50808 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50809 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 50868 Query: 494 gattcgcg 501 |||||||| Sbjct: 50869 gattcgcg 50876
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126510 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 126569 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126570 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 126629 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126630 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 126689 Query: 494 gattcgcg 501 |||||||| Sbjct: 126690 gattcgcg 126697 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96327 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 96268 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96267 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 96208 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96207 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 96148 Query: 494 gattcgcg 501 |||||||| Sbjct: 96147 gattcgcg 96140
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 256 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 316 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 376 Query: 494 gattcgcg 501 |||||||| Sbjct: 377 gattcgcg 384
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64211 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 64270 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64271 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 64330 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64331 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 64390 Query: 494 gattcgcg 501 |||||||| Sbjct: 64391 gattcgcg 64398
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68549 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 68490 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68489 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 68430 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68429 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 68370 Query: 494 gattcgcg 501 |||||||| Sbjct: 68369 gattcgcg 68362
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2649 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 2590 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2589 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 2530 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2529 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 2470 Query: 494 gattcgcg 501 |||||||| Sbjct: 2469 gattcgcg 2462
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full insert sequence Length = 1602 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 738 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 678 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 618 Query: 494 gattcgcg 501 |||||||| Sbjct: 617 gattcgcg 610
>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full insert sequence Length = 1448 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 652 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 592 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 532 Query: 494 gattcgcg 501 |||||||| Sbjct: 531 gattcgcg 524
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946630 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 19946571 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946570 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 19946511 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946510 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 19946451 Query: 494 gattcgcg 501 |||||||| Sbjct: 19946450 gattcgcg 19946443 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390272 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 10390213 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390212 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 10390153 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390152 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 10390093 Query: 494 gattcgcg 501 |||||||| Sbjct: 10390092 gattcgcg 10390085 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286122 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 10286181 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286182 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 10286241 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286242 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 10286301 Query: 494 gattcgcg 501 |||||||| Sbjct: 10286302 gattcgcg 10286309
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1128 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1069 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1009 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 949 Query: 494 gattcgcg 501 |||||||| Sbjct: 948 gattcgcg 941
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1128 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1069 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1009 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 949 Query: 494 gattcgcg 501 |||||||| Sbjct: 948 gattcgcg 941
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1128 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1069 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1068 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1009 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1008 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 949 Query: 494 gattcgcg 501 |||||||| Sbjct: 948 gattcgcg 941
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127227 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 127286 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127287 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 127346 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127347 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 127406 Query: 494 gattcgcg 501 |||||||| Sbjct: 127407 gattcgcg 127414 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97004 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 96945 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96944 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 96885 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96884 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 96825 Query: 494 gattcgcg 501 |||||||| Sbjct: 96824 gattcgcg 96817
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122657 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122716 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122717 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122776 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122777 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122836 Query: 494 gattcgcg 501 |||||||| Sbjct: 122837 gattcgcg 122844 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92382 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92323 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92322 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92263 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92262 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92203 Query: 494 gattcgcg 501 |||||||| Sbjct: 92202 gattcgcg 92195
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122707 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 122766 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122767 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 122826 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122827 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 122886 Query: 494 gattcgcg 501 |||||||| Sbjct: 122887 gattcgcg 122894 Score = 373 bits (188), Expect = e-100 Identities = 188/188 (100%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92187 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 92128 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92127 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 92068 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92067 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 92008 Query: 494 gattcgcg 501 |||||||| Sbjct: 92007 gattcgcg 92000
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88428 atcctctccttcctccggcttaacaccggcggtttgttcagggttccaaactcatagtgg 88487 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88488 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 88547 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88548 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 88607 Query: 494 gattcgcg 501 |||||||| Sbjct: 88608 gattcgcg 88615
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126250 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 126309 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126310 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 126369 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 126370 tgacgacagccatgcaccacctgtgtccgggttcccgagggcacccctctctttcaagag 126429 Query: 494 gattcgcg 501 |||||||| Sbjct: 126430 gattcgcg 126437
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1124 atcctctccttcctccggcttaacaccggcggtctattcagggttccaaactcatagtgg 1065 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1064 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1005 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 945 Query: 494 gattcgcg 501 |||||||| Sbjct: 944 gattcgcg 937
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9244628 atcctctccttcctccggcttaacaccagcggtctgttcagggttccaaactcatagtgg 9244687 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244688 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 9244747 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244748 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 9244807 Query: 494 gattcgcg 501 |||||||| Sbjct: 9244808 gattcgcg 9244815 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacac 339 ||||||||||||||| |||||||||| Sbjct: 11864586 atcctctccttcctctggcttaacac 11864611
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828791 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 12828850 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828851 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 12828910 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12828911 tgacgacagccatgcaccacctgtgtccgggttcccgagggcacccctctctttcaagag 12828970 Query: 494 gattcgcg 501 |||||||| Sbjct: 12828971 gattcgcg 12828978 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 884004 atcctctccttcctccggcttaacaccggcggtttgttcagggttccaaactcatagtgg 884063 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884064 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 884123 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884124 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 884183 Query: 494 gattcgcg 501 |||||||| Sbjct: 884184 gattcgcg 884191
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 55841 atcctctccttcctccggcttaacaccagcggtctgttcagggttccaaactcatagtgg 55900 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55901 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 55960 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55961 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 56020 Query: 494 gattcgcg 501 |||||||| Sbjct: 56021 gattcgcg 56028
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 365 bits (184), Expect = 9e-98 Identities = 187/188 (99%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1127 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1068 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1067 caactaaacacaagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1008 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 948 Query: 494 gattcgcg 501 |||||||| Sbjct: 947 gattcgcg 940
>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: SRRT24 Length = 1478 Score = 357 bits (180), Expect = 2e-95 Identities = 186/188 (98%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1094 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 1034 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 1033 tgacgacagccatgcaccacctgtgtccgcgttcccaagggcactcctctctttcaagag 974 Query: 494 gattcgcg 501 |||||||| Sbjct: 973 gattcgcg 966
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 351 bits (177), Expect = 1e-93 Identities = 183/185 (98%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 61802 atcctctccttcctccggcttaacaccggcggtctgtttagggttccaaactcatagtgg 61861 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61862 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 61921 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61922 tgacgacagccatgcaccacctgtgttcgcgttcccgagggcacccctctctttcaagag 61981 Query: 494 gattc 498 ||||| Sbjct: 61982 gattc 61986
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 341 bits (172), Expect = 1e-90 Identities = 181/184 (98%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1100 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 1041 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1040 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 981 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| Sbjct: 980 tgacgacagccatgcaccacctgtgtccgcgttcccaagggcacccctctcttccaggag 921 Query: 494 gatt 497 |||| Sbjct: 920 gatt 917
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 341 bits (172), Expect = 1e-90 Identities = 184/188 (97%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 17142 atcctctacttcctccggcttaacaccggcgggctgttcagggttccaaactcatagtgg 17201 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17202 caacttaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 17261 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 17262 tgacgacagccatgcaccacttgtgtccgcgttcccgagggcacccctctctttcaagag 17321 Query: 494 gattcgcg 501 |||||||| Sbjct: 17322 gattcgcg 17329
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 341 bits (172), Expect = 1e-90 Identities = 184/188 (97%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86065 atcctctacttcctccggcttaacaccggcgggctgttcagggttccaaactcatagtgg 86124 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86125 caacttaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 86184 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 86185 tgacgacagccatgcaccacttgtgtccgcgttcccgagggcacccctctctttcaagag 86244 Query: 494 gattcgcg 501 |||||||| Sbjct: 86245 gattcgcg 86252
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 337 bits (170), Expect = 2e-89 Identities = 180/182 (98%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 320 tccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtggcaacta 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1093 tccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtggcaacta 1034 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1033 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 974 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 973 cagccatgcaccacctgtgtccgcg-tcccaagggcacccctctctttcaagaggattcg 915 Query: 500 cg 501 || Sbjct: 914 cg 913
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 142236 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 142295 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142296 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 142355 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 142356 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 142415 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 142416 ggattcgcg 142424 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 107709 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 107650 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107649 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 107590 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107589 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 107530 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 107529 ggattcgcg 107521
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 144907 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 144966 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144967 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 145026 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 145027 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 145086 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 145087 ggattcgcg 145095 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 108750 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 108691 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 108690 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 108631 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 108630 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 108571 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 108570 ggattcgcg 108562
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 1109 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacagtg 1050 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1049 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 990 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 930 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 929 ggattcgcg 921
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 1120 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 1061 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1060 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1001 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1000 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 941 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 940 ggattcgcg 932
>gb|AF244557.1|AF244557 Magnolia x soulangeana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1456 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 1113 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 1054 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1053 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 994 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 993 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 934 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 933 ggattcgcg 925
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | || Sbjct: 1761 atcctcaccttcctccggcttaacaccggcagtctgttcagggttccaaactcaacgatg 1702 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1701 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1642 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1641 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 1582 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1581 ggattcgcg 1573
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 311 bits (157), Expect = 1e-81 Identities = 182/189 (96%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 323 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 382 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 383 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 442 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 443 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 502 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 503 ggattcgcg 511
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 305 bits (154), Expect = 7e-80 Identities = 179/186 (96%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 137744 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 137803 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137804 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 137863 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 137864 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 137923 Query: 493 ggattc 498 |||||| Sbjct: 137924 ggattc 137929 Score = 305 bits (154), Expect = 7e-80 Identities = 179/186 (96%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 102538 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 102479 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102478 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102419 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102418 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102359 Query: 493 ggattc 498 |||||| Sbjct: 102358 ggattc 102353
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 5343 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 5284 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5283 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 5224 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5223 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 5164 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 5163 ggattcgcg 5155
>gb|BT014415.1| Lycopersicon esculentum clone 133723R, mRNA sequence Length = 1449 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1258 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 1199 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1198 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1139 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1138 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 1079 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1078 ggattcgcg 1070
>gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial sequence Length = 699 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 452 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 393 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 392 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 333 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 332 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 273 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 272 ggattcgcg 264
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 135545 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 135604 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135605 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 135664 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135665 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 135724 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 135725 ggattcgcg 135733 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 101333 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 101274 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101273 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 101214 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 101213 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 101154 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 101153 ggattcgcg 101145
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138732 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138791 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138792 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138851 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138852 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138911 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138912 ggattcgcg 138920 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103898 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103839 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103838 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 103779 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103778 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 103719 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 103718 ggattcgcg 103710
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 134275 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 134334 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134335 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 134394 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134395 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 134454 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 134455 ggattcgcg 134463 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 100360 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 100301 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100300 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 100241 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100240 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 100181 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 100180 ggattcgcg 100172
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 2425 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 2484 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2485 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 2544 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2545 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 2604 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 2605 ggattcgcg 2613
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || | Sbjct: 134362 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgttg 134421 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134422 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 134481 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134482 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 134541 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 134542 ggattcgcg 134550 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || | Sbjct: 99083 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgttg 99024 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99023 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 98964 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 98963 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 98904 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 98903 ggattcgcg 98895
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 139352 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 139411 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139412 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 139471 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139472 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 139531 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 139532 ggattcgcg 139540 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 104205 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 104146 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104145 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 104086 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104085 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 104026 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 104025 ggattcgcg 104017
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 146190 atcctcgccttcctccggcttagcaccggcagtctgttcagggttccaaactcaacattg 146249 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 146250 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 146309 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 146310 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 146369 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 146370 ggattcgcg 146378 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 107138 atcctcgccttcctccggcttagcaccggcagtctgttcagggttccaaactcaacattg 107079 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107078 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 107019 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107018 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 106959 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 106958 ggattcgcg 106950
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138094 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138153 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138154 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138213 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138214 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138273 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138274 ggattcgcg 138282 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 102942 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 102883 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102882 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102823 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102822 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102763 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102762 ggattcgcg 102754
>gb|DQ401208.1| Uncultured Pseudomonas sp. clone cloMSN28 16S ribosomal RNA gene, partial sequence Length = 563 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 408 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 349 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 348 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 289 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 288 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 229 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 228 ggattcgcg 220
>dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR15 Length = 507 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 204 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 145 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 85 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 84 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 25 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 24 ggattcgcg 16
>dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR3 Length = 507 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 204 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 145 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 85 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 84 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 25 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 24 ggattcgcg 16
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 135545 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 135604 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135605 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 135664 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135665 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 135724 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 135725 ggattcgcg 135733 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 101219 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 101160 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101159 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 101100 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 101099 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 101040 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 101039 ggattcgcg 101031
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || | Sbjct: 43460 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgttg 43401 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 43400 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 43341 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 43340 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 43281 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 43280 ggattcgcg 43272
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 139352 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 139411 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139412 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 139471 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 139472 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 139531 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 139532 ggattcgcg 139540 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103073 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103014 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103013 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102954 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102953 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102894 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102893 ggattcgcg 102885
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138230 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138289 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138290 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138349 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138350 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138409 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138410 ggattcgcg 138418 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103113 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103054 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103053 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102994 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102993 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102934 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102933 ggattcgcg 102925
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 3940 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 3881 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 3880 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 3821 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 3820 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 3761 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 3760 ggattcgcg 3752
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138228 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138287 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138288 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138347 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138348 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138407 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138408 ggattcgcg 138416 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103110 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103051 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103050 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102991 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102990 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102931 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102930 ggattcgcg 102922
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138139 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138198 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138199 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138258 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138259 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138318 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138319 ggattcgcg 138327 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 102989 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 102930 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102929 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102870 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102869 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102810 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102809 ggattcgcg 102801
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 136501 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 136560 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136561 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 136620 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136621 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 136680 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 136681 ggattcgcg 136689 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 102148 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 102089 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102088 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102029 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102028 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 101969 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 101968 ggattcgcg 101960
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138730 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138789 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138790 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138849 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138850 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138909 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138910 ggattcgcg 138918 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103896 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103837 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103836 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 103777 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103776 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 103717 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 103716 ggattcgcg 103708
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 135538 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 135597 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135598 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 135657 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135658 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 135717 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 135718 ggattcgcg 135726 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 101331 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 101272 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101271 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 101212 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 101211 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 101152 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 101151 ggattcgcg 101143
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138471 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138530 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138531 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138590 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138591 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138650 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138651 ggattcgcg 138659 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 103667 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 103608 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103607 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 103548 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 103547 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 103488 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 103487 ggattcgcg 103479
>emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene Length = 678 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||| ||||| | ||| Sbjct: 392 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccacactcaatggtg 333 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 332 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacggg 273 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 272 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 213 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 212 ggattcgcg 204
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 2361 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 2302 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2301 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 2242 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2241 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 2182 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 2181 ggattcgcg 2173
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 189 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 248 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 249 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 308 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 309 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 368 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 369 ggattcgcg 377
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacagtg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1054 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 994 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 935 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 934 ggattcgcg 926
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 303 bits (153), Expect = 3e-79 Identities = 181/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1137 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 1078 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1077 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1018 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1017 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 958 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 957 ggattcgcg 949
>gb|DQ187922.1| Uncultured phototrophic eukaryote clone 90 16S ribosomal RNA gene, partial sequence Length = 927 Score = 297 bits (150), Expect = 2e-77 Identities = 178/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||| |||||| | ||| Sbjct: 919 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccgaactcaatggtg 860 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 859 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 800 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 799 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 740 Query: 493 ggattc 498 |||||| Sbjct: 739 ggattc 734
>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone: G32 Length = 960 Score = 297 bits (150), Expect = 2e-77 Identities = 175/182 (96%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tggcaacta 379 ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||||||||| Sbjct: 650 ccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtggcaacta 591 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 590 aacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 531 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 530 cagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagaggattcg 471 Query: 500 cg 501 || Sbjct: 470 cg 469
>dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR11 Length = 507 Score = 297 bits (150), Expect = 2e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 204 atcctcaccttcctccggcttaccaccggcagtctgttcagggttccaaactcaacgatg 145 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 85 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 84 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 25 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 24 gnattcgcg 16
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 297 bits (150), Expect = 2e-77 Identities = 178/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 130618 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 130677 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 130678 gcaactaaacacaagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 130737 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130738 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 130797 Query: 493 ggattc 498 |||||| Sbjct: 130798 ggattc 130803 Score = 297 bits (150), Expect = 2e-77 Identities = 178/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 104304 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 104245 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104244 gcaactaaacacaagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 104185 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104184 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 104125 Query: 493 ggattc 498 |||||| Sbjct: 104124 ggattc 104119
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 297 bits (150), Expect = 2e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 1108 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacagtg 1049 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1048 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 989 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 988 ctgacgacagncatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 929 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 928 ggattcgcg 920
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | | || Sbjct: 1098 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgatg 1039 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1038 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 979 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 978 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 919 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 918 ggattcgcg 910
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 142302 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 142361 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142362 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 142421 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 142422 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 142481 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 142482 ggattcgcg 142490 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 106795 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 106736 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106735 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 106676 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106675 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 106616 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 106615 ggattcgcg 106607
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 143131 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 143190 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 143191 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 143250 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 143251 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 143310 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 143311 ggattcgcg 143319 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 106929 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 106870 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106869 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 106810 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106809 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 106750 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 106749 ggattcgcg 106741
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 2614 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 2673 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2674 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 2733 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2734 ctgacgacagccatgcaccacctgtgtccacgttcccgaaggcacccctctctttcaaga 2793 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 2794 ggattcgcg 2802
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 1126 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 1067 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1066 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1007 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1006 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 947 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 946 ggattcgcg 938
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 1142 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 1083 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1082 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1023 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1022 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 963 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 962 ggattcgcg 954
>gb|AF372579.1|AF372579 Lespedeza cuneata 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 700 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 191 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 250 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 251 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 310 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 311 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 370 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 371 ggattcgcg 379
>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 5206 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 2750 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 2691 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2690 gtaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 2631 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2630 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 2571 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 2570 ggattcgcg 2562
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1434 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 1375 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1374 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1315 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1314 ctgacgacagccattcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 1255 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1254 ggattcgcg 1246
>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast RNA, partial sequence Length = 1563 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 1119 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 1060 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1059 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1000 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 999 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 940 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 939 ggattcgcg 931
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 133071 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 133130 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133131 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 133190 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133191 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 133250 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 133251 ggattcgcg 133259 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 99385 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 99326 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99325 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 99266 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 99265 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 99206 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 99205 ggattcgcg 99197
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 142482 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 142541 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142542 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 142601 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 142602 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacacctctctttcaaga 142661 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 142662 ggattcgcg 142670 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 106817 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 106758 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106757 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 106698 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 106697 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacacctctctttcaaga 106638 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 106637 ggattcgcg 106629
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 138108 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 138167 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138168 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 138227 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 138228 ctgaagacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 138287 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 138288 ggattcgcg 138296 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 102954 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 102895 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102894 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 102835 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 102834 ctgaagacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 102775 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 102774 ggattcgcg 102766
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 49816 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 49875 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 49876 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 49935 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 49936 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 49995 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 49996 ggattcgcg 50004
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1526 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 1467 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1466 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1407 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 1406 ctgacgacagccatgcaccacctgtgtccacgttcccgaaggcacccctctctttcaaga 1347 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1346 ggattcgcg 1338
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 295 bits (149), Expect = 7e-77 Identities = 180/189 (95%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 1312 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 1253 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1252 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1193 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1192 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 1133 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1132 ggattcgcg 1124
>gb|AY803217.1| Angiosperm environmental sample clone C82 16S ribosomal RNA gene, partial sequence; chloroplast Length = 545 Score = 289 bits (146), Expect = 4e-75 Identities = 178/188 (94%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||||||||||||| | || |||| Sbjct: 222 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaca---atggtgg 166 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 165 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagc 106 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagag 46 Query: 494 gattcgcg 501 |||||||| Sbjct: 45 gattcgcg 38
>gb|AY803214.1| Angiosperm environmental sample clone B92 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 289 bits (146), Expect = 4e-75 Identities = 178/188 (94%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||||||||||||| | || |||| Sbjct: 222 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaca---atggtgg 166 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 165 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagc 106 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagag 46 Query: 494 gattcgcg 501 |||||||| Sbjct: 45 gattcgcg 38
>gb|AY803212.1| Angiosperm environmental sample clone B63 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 289 bits (146), Expect = 4e-75 Identities = 178/188 (94%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||||||||||||| | || |||| Sbjct: 222 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaca---atggtgg 166 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 165 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagc 106 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagag 46 Query: 494 gattcgcg 501 |||||||| Sbjct: 45 gattcgcg 38
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 289 bits (146), Expect = 4e-75 Identities = 177/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 136996 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 137055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137056 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 137115 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 137116 ctgacgacagccatgcaccacctgtgtccgtgttcccgaaggcactcctctctttcaaga 137175 Query: 493 ggattc 498 |||||| Sbjct: 137176 ggattc 137181 Score = 289 bits (146), Expect = 4e-75 Identities = 177/186 (95%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | ||| Sbjct: 100975 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatggtg 100916 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100915 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 100856 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 100855 ctgacgacagccatgcaccacctgtgtccgtgttcccgaaggcactcctctctttcaaga 100796 Query: 493 ggattc 498 |||||| Sbjct: 100795 ggattc 100790
>emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 partial 16S rRNA gene Length = 757 Score = 289 bits (146), Expect = 4e-75 Identities = 181/190 (95%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 433 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 374 Query: 373 gcaactaaacacga-gggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 373 gcaactaaacacgaagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 314 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 313 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 254 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 253 aggattcgcg 244
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 289 bits (146), Expect = 4e-75 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcat-agtg 372 |||||| ||||||||||| ||| ||||||| ||||| ||||||||||||||||| |||| Sbjct: 1111 atcctcaccttcctccggyttatcaccggcagtctgctcagggttccaaactcaacagtg 1052 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 1051 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggnacgag 992 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 991 ctgacgacagmcatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 932 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 931 ggattcgcg 923
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 289 bits (146), Expect = 4e-75 Identities = 181/190 (95%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1134 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacggtg 1075 Query: 373 gcaactaaacacga-gggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1074 gcaactaaacacgaagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 1015 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1014 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 955 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 954 aggattcgcg 945
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 8298 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 8239 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 8238 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 8179 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 8178 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 8119 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 8118 ggattcgcg 8110
>gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA gene, partial sequence Length = 1039 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtg 372 |||||| ||||||||||||||| ||||||| ||||| |||||||||||||||| | ||| Sbjct: 820 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcgacggtg 761 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 760 gcaactaagcacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 701 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 700 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 641 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 640 ggattcgcg 632
>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial sequence Length = 1050 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtg 372 |||||| ||||||||||||||| ||||||| ||||| |||||||||||||||| | ||| Sbjct: 831 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcgacggtg 772 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 771 gcaactaagcacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 712 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 711 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 652 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 651 ggattcgcg 643
>gb|AF263516.1|AF263516 Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 502 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 206 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 265 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 266 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 325 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 326 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagg 385 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 386 ggattcgcg 394
>gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ribosomal RNA gene, partial sequence; plastid Length = 964 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || | Sbjct: 660 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgttg 601 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 600 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 541 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| Sbjct: 540 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactccgctctttcaaga 481 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 480 ggattcgcg 472
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 134656 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 134715 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134716 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 134775 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134776 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 134835 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 134836 ggattcgcg 134844 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 100738 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 100679 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100678 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 100619 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100618 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 100559 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 100558 ggattcgcg 100550
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 4323 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 4264 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4263 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 4204 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4203 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 4144 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 4143 ggattcgcg 4135
>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 287 bits (145), Expect = 2e-74 Identities = 179/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | ||| Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatggtg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1054 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||| Sbjct: 994 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctctcaaga 935 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 934 ggattcgcg 926
>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 287 bits (145), Expect = 2e-74 Identities = 173/181 (95%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||||||||| ||||||| ||||||| ||||||||||||| | |||||||||||| Sbjct: 1103 ccttcctccggcttatcaccggcagtctgtttagggttccaaacttagtagtggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1043 aacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 983 cagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaagaggattcg 924 Query: 500 c 500 | Sbjct: 923 c 923
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 283 bits (143), Expect = 3e-73 Identities = 179/190 (94%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag--t 371 |||||| ||||||||||||||| ||||||| ||||| |||||||||||| |||| | | Sbjct: 138541 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaacctcaacggtt 138600 Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138601 ggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 138660 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138661 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 138720 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 138721 aggattcgcg 138730 Score = 283 bits (143), Expect = 3e-73 Identities = 179/190 (94%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag--t 371 |||||| ||||||||||||||| ||||||| ||||| |||||||||||| |||| | | Sbjct: 103368 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaacctcaacggtt 103309 Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103308 ggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 103249 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 103248 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 103189 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 103188 aggattcgcg 103179
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 283 bits (143), Expect = 3e-73 Identities = 179/190 (94%), Gaps = 2/190 (1%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag--t 371 |||||| ||||||||||||||| ||||||| ||||| |||||||||||| |||| | | Sbjct: 138816 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaacctcaacggtt 138875 Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138876 ggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 138935 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 138936 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 138995 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 138996 aggattcgcg 139005 Score = 283 bits (143), Expect = 3e-73 Identities = 179/190 (94%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag--t 371 |||||| ||||||||||||||| ||||||| ||||| |||||||||||| |||| | | Sbjct: 103591 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaacctcaacggtt 103532 Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103531 ggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacga 103472 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 103471 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 103412 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 103411 aggattcgcg 103402
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 281 bits (142), Expect = 1e-72 Identities = 173/182 (95%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tggcaacta 379 ||||||||||||||| ||||||| ||||| ||||||||||||||||| | ||||||||| Sbjct: 1121 ccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtggcaacta 1062 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1061 aacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 1002 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 1001 cagccatgcaccacctgtgcccgcgttcccgaaggcacccctctctttcaagaggattcg 942 Query: 500 cg 501 || Sbjct: 941 cg 940
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 281 bits (142), Expect = 1e-72 Identities = 180/190 (94%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 1101 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 1042 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaa-caccttacggcacga 431 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 1041 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaaacaccttacggcacga 982 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 981 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 922 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 921 aggattcgcg 912
>gb|AY803199.1| Angiosperm environmental sample clone A20 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 281 bits (142), Expect = 1e-72 Identities = 177/188 (94%), Gaps = 3/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||||||||||||| | || |||| Sbjct: 222 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaca---atggtgg 166 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 165 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcgcgagc 106 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagag 46 Query: 494 gattcgcg 501 |||||||| Sbjct: 45 gattcgcg 38
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 281 bits (142), Expect = 1e-72 Identities = 176/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1118 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 1059 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1058 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 999 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||| Sbjct: 998 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcgaga 939 Query: 493 ggattc 498 |||||| Sbjct: 938 ggattc 933
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 372 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacggtg 431 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 432 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 491 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 492 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctctctttcaaga 550 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 551 ggattcgcg 559
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 1683 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgttg 1624 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1623 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 1564 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1563 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 1504 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1503 ggattcgcg 1495
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| || | Sbjct: 1127 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaacgttg 1068 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1067 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1008 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 1007 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctccctttcaaga 948 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 947 ggattcgcg 939
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatgatg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1054 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 994 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 935 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 934 gaattcgcg 926
>gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 2703 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 322 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgttg 263 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 262 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 203 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 202 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 143 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 142 ggattcgcg 134
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcata-gtg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| ||| Sbjct: 1127 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaactgtg 1068 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1067 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1008 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 1007 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccccttctttcaaga 948 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 947 ggattcgcg 939
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 1139 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcagtgatg 1080 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1079 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1020 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1019 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 960 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 959 gaattcgcg 951
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 280 bits (141), Expect = 4e-72 Identities = 179/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1124 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgatg 1065 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1064 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1005 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1004 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcactcctctctttcaaga 946 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 945 ggattcgcg 937
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| || | || ||||||||||||||||||||||| | || Sbjct: 4203 atcctcaccttcctccggcttatcatcagcagtctgttcagggttccaaactcaatcttg 4262 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 4263 gcaactaaacacgagggttgcgctcgttgcgggacctaacccaacaccttacggcacgag 4322 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 4323 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 4382 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 4383 ggattcgcg 4391
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 1153 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatgatg 1094 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1093 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1034 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1033 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 974 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 973 gaattcgcg 965
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 82318 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgttg 82377 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 82378 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 82437 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 82438 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 82497 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 82498 ggattcgcg 82506
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 154021 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatgatg 154080 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 154081 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 154140 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 154141 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 154200 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 154201 gaattcgcg 154209 Score = 280 bits (141), Expect = 4e-72 Identities = 178/189 (94%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 114645 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatgatg 114586 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114585 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 114526 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 114525 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 114466 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 114465 gaattcgcg 114457
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| || | Sbjct: 83387 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgttg 83328 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83327 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 83268 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 83267 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 83208 Query: 493 ggattc 498 |||||| Sbjct: 83207 ggattc 83202
>emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clone RS 8-Bact43 Length = 1489 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1156 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 1097 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1096 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1037 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 1036 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 977 Query: 493 ggattc 498 |||||| Sbjct: 976 ggattc 971
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1143 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 1084 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1083 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1024 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 1023 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 964 Query: 493 ggattc 498 |||||| Sbjct: 963 ggattc 958
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1107 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 1048 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1047 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 988 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 987 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 928 Query: 493 ggattc 498 |||||| Sbjct: 927 ggattc 922
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1223 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 1164 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1163 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1104 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 1103 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 1044 Query: 493 ggattc 498 |||||| Sbjct: 1043 ggattc 1038
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 274 bits (138), Expect = 3e-70 Identities = 172/182 (94%), Gaps = 1/182 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||||||||| ||||||| ||||||| ||||||||||||||| || ||||||||| Sbjct: 1103 ccttcctccggcttatcaccggcagtctgtttagggttccaaactcaataatggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1043 aacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 |||||||||||||||||||||||||||||||| ||||| ||||||| |||| |||||||| Sbjct: 983 cagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctctcaaaaggattcg 924 Query: 500 cg 501 || Sbjct: 923 cg 922
>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence Length = 1447 Score = 274 bits (138), Expect = 3e-70 Identities = 175/186 (94%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 1109 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaataatg 1050 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1049 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 990 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| | Sbjct: 989 ctgacgacagccatgcaccacctgtatccgcgttcccgaaggcactcctctctttcaaaa 930 Query: 493 ggattc 498 |||||| Sbjct: 929 ggattc 924
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 353 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 412 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 413 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 472 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 473 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctctctttcaaga 531 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 532 ggattcgcg 540
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 272 bits (137), Expect = 1e-69 Identities = 177/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 1102 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgttg 1043 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1042 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 983 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 982 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctccctttcaaga 923 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 922 ggattcgcg 914
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 272 bits (137), Expect = 1e-69 Identities = 177/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| | || Sbjct: 1139 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaatgatg 1080 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1079 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1020 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||| Sbjct: 1019 ctgacgacagccatgcaccacctgtgtccgcgctcccgaaggcactcctctctttcaaga 960 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 959 gaattcgcg 951
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 272 bits (137), Expect = 1e-69 Identities = 177/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 26242 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaacgttg 26301 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 26302 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 26361 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| Sbjct: 26362 ctgacgacagccatgcaccacctgtgtccgcgttcccgaagacactcctctctttcaaga 26421 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 26422 ggattcgcg 26430
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 272 bits (137), Expect = 1e-69 Identities = 177/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 1113 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 1054 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1053 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 994 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 993 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcttctctttcaaga 934 Query: 493 ggattcgcg 501 |||||||| Sbjct: 933 agattcgcg 925
>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA Length = 2000 Score = 272 bits (137), Expect = 1e-69 Identities = 178/189 (94%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 1648 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 1589 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1588 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1529 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1528 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctctctttcaaga 1470 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1469 ggattcgcg 1461
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 272 bits (137), Expect = 1e-69 Identities = 177/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 1109 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 1050 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1049 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 990 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 989 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcttctctttcaaga 930 Query: 493 ggattcgcg 501 |||||||| Sbjct: 929 agattcgcg 921
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 268 bits (135), Expect = 2e-68 Identities = 175/188 (93%), Gaps = 4/188 (2%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| |||| || |||||||||||||||||||| ||| Sbjct: 1482 atcctcaccttcctccggcttatcaccagcagtctgttcagggttccaaacga----tgg 1427 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1426 caactaaacacgagggttgcgctcgttgcgggacttaacccaacacctgacggcacgagc 1367 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1366 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagag 1307 Query: 494 gattcgcg 501 |||||||| Sbjct: 1306 gattcgcg 1299
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 268 bits (135), Expect = 2e-68 Identities = 169/179 (94%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||||||||| ||||||| ||||||||||||||||||||| | || ||||||||| Sbjct: 1103 ccttcctccggcttatcaccggcagtctgttcagggttccaaactgaataatggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1043 aacacgggggttgcgctcgttgcgggacttaacccaacacctcacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattc 498 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 983 cagccatgcaccacctgtgtccgcgttcccgagggcactcccctctttcaagaggattc 925
>gb|DQ416274.1| Uncultured bacterium clone s3ub39 16S ribosomal RNA gene, partial sequence Length = 662 Score = 266 bits (134), Expect = 6e-68 Identities = 174/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | | || Sbjct: 397 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaatgctg 338 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 337 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 278 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 277 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 218 Query: 493 ggattc 498 |||||| Sbjct: 217 ggattc 212
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 266 bits (134), Expect = 6e-68 Identities = 174/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 1109 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 1050 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1049 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 990 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 | ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 989 ccgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 930 Query: 493 ggattc 498 |||||| Sbjct: 929 ggattc 924
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 266 bits (134), Expect = 6e-68 Identities = 174/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| |||||||||||| || ||||||| ||||||||||||||||||||||| | || Sbjct: 1108 atcctcaccttcctccggcctatcaccggcagtctgttcagggttccaaactcaatgctg 1049 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1048 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 989 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 988 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 929 Query: 493 ggattc 498 |||||| Sbjct: 928 ggattc 923
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact02 Length = 1503 Score = 266 bits (134), Expect = 6e-68 Identities = 174/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 1158 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgccg 1099 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1098 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1039 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 1038 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 979 Query: 493 ggattc 498 |||||| Sbjct: 978 ggattc 973
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 266 bits (134), Expect = 6e-68 Identities = 174/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | | || Sbjct: 85476 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaatgctg 85417 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 85416 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 85357 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || Sbjct: 85356 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcggga 85297 Query: 493 ggattc 498 |||||| Sbjct: 85296 ggattc 85291
>gb|AF143264.1| Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 493 Score = 264 bits (133), Expect = 3e-67 Identities = 168/177 (94%), Gaps = 2/177 (1%) Strand = Plus / Plus Query: 326 ctccggcttaacaccggcggtctgttcagggttccaaactcatag-tggcaactaaacac 384 |||||||||| ||||||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 214 ctccggcttatcaccggcagtctgctcagggttccaaactcaacggtggcaactaaacac 273 Query: 385 gagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacgacagcc 444 ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| Sbjct: 274 gagggttgcgctcgttgcgggacttaacccaacac-ttacggcacgagctgacgacagcc 332 Query: 445 atgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcg 501 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 333 atgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagaggattcgcg 389
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 264 bits (133), Expect = 3e-67 Identities = 176/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 120607 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 120666 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 120667 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 120726 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| | Sbjct: 120727 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctttctttcaaaa 120786 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 120787 ggattcgcg 120795 Score = 264 bits (133), Expect = 3e-67 Identities = 176/189 (93%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 87495 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 87436 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 87435 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 87376 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| | Sbjct: 87375 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctttctttcaaaa 87316 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 87315 ggattcgcg 87307
>gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial sequence; plastid Length = 692 Score = 264 bits (133), Expect = 3e-67 Identities = 168/177 (94%), Gaps = 2/177 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 448 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaacgatg 389 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 388 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 329 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttca 489 ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 328 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggca-ccctctctttca 273
>emb|Z81323.1|PAA16SRRN P.aquilinum chloroplast 16S rRNA gene Length = 1372 Score = 264 bits (133), Expect = 3e-67 Identities = 170/181 (93%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtggcaacta 379 ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 1079 ccttcctccggcttatcaccggcagtctgtttagggttccaaacttgatagtggcaacta 1020 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1019 aacacgggggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 960 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||| Sbjct: 959 cagccatgcaccacctgtgtctgcgttcccgaaggcactcctctctttcaaaaggattcg 900 Query: 500 c 500 | Sbjct: 899 c 899
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||| ||||| ||||||||| | | || Sbjct: 150343 atcctcaccttcctccggcttatcaccggcagtctattcagagttccaaacctagtgatg 150402 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150403 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 150462 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 150463 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcctctctttcaaaa 150522 Query: 493 ggattc 498 |||||| Sbjct: 150523 ggattc 150528 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||| ||||| ||||||||| | | || Sbjct: 108119 atcctcaccttcctccggcttatcaccggcagtctattcagagttccaaacctagtgatg 108060 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 108059 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 108000 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 107999 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcctctctttcaaaa 107940 Query: 493 ggattc 498 |||||| Sbjct: 107939 ggattc 107934
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 1138 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 1079 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1078 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1019 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 1018 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcttctctttcaaga 959 Query: 493 ggattc 498 ||||| Sbjct: 958 agattc 953
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1054 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| | Sbjct: 994 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctttctttcaaaa 935 Query: 493 ggattc 498 |||||| Sbjct: 934 ggattc 929
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 1110 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgccg 1051 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1050 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 991 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||| || Sbjct: 990 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcccctctttcggga 931 Query: 493 ggattc 498 |||||| Sbjct: 930 ggattc 925
>gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 695 Score = 258 bits (130), Expect = 2e-65 Identities = 164/174 (94%), Gaps = 1/174 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||| | || Sbjct: 322 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactcaatgctg 381 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 382 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 441 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctt 486 |||||||||||||||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 442 ctgacgacagccatgcaccacctgtgtccgtgttcccgaaggcactcctctctt 495
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 256 bits (129), Expect = 6e-65 Identities = 175/189 (92%), Gaps = 6/189 (3%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| | || Sbjct: 1095 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaattcaacgatg 1036 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1035 gcaactaaacacgaggg-----ctcgttgcgggacttaacccaacaccttacggcacgag 981 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 980 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaaga 921 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 920 ggattcgcg 912
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 252 bits (127), Expect = 1e-63 Identities = 173/187 (92%), Gaps = 1/187 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| |||||||||||| | | || Sbjct: 1332 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaacaaaatgatg 1273 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1272 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1213 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||| || ||||||| | |||||||||||||||||||| Sbjct: 1212 ctgacgacagccatgcaccacctgtgcccacgttccctaaggcacccctctctttcaaga 1153 Query: 493 ggattcg 499 ||||||| Sbjct: 1152 ggattcg 1146
>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 250 bits (126), Expect = 4e-63 Identities = 166/178 (93%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||| ||||| ||||||||| | | || Sbjct: 1112 atcctcaccttcctccggcttatcaccggcagtctattcagagttccaaacctagtgatg 1053 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1052 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 993 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 992 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcctctctttcaa 935
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 250 bits (126), Expect = 4e-63 Identities = 176/190 (92%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| |||||||||| |||||||||| | || | Sbjct: 1876 atcctcaccttcctccggcttatcaccggcagtctgttcagagttccaaactaaacgttg 1817 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1816 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 1757 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| Sbjct: 1756 ctgacgacagccatgcaccacctgtgt-cgcattcccgaaggcactcctctctttcaaga 1698 Query: 493 ggattcgcgc 502 |||||||||| Sbjct: 1697 ggattcgcgc 1688
>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes Length = 2315 Score = 250 bits (126), Expect = 4e-63 Identities = 176/190 (92%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| |||||||||| |||||||||| | || | Sbjct: 1609 atcctcaccttcctccggcttatcaccggcagtctgttcagagttccaaactaaacgttg 1550 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1549 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 1490 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| Sbjct: 1489 ctgacgacagccatgcaccacctgtgt-cgcattcccgaaggcactcctctctttcaaga 1431 Query: 493 ggattcgcgc 502 |||||||||| Sbjct: 1430 ggattcgcgc 1421
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 250 bits (126), Expect = 4e-63 Identities = 172/186 (92%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||| ||||| ||||||||| | | || Sbjct: 1129 atcctcaccttcctccggcttatcaccggcagtctattcagagttccaaacctagtgatg 1070 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1069 gcaactgaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1010 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1009 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctctttcaaga 950 Query: 493 ggattc 498 |||||| Sbjct: 949 ggattc 944
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 250 bits (126), Expect = 4e-63 Identities = 176/190 (92%), Gaps = 2/190 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| |||||||||| |||||||||| | || | Sbjct: 1876 atcctcaccttcctccggcttatcaccggcagtctgttcagagttccaaactaaacgttg 1817 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1816 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 1757 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||||| Sbjct: 1756 ctgacgacagccatgcaccacctgtgt-cgcattcccgaaggcactcctctctttcaaga 1698 Query: 493 ggattcgcgc 502 |||||||||| Sbjct: 1697 ggattcgcgc 1688
>gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1418 Score = 248 bits (125), Expect = 1e-62 Identities = 174/189 (92%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| |||||||||| |||||||||||| || |||| || |||||||||| | || || Sbjct: 1102 atcctcaccttcctccgacttaacaccggcagtatgtttagagttccaaactaagtattg 1043 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 1042 gcaactaaacacgagggttgcgctcgttatgggacttaacccaacaccttacggcacgag 983 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 982 ctgacgacagccatgcaccacctgtgtccgcgttccctagggcactcctctctttcaaga 923 Query: 493 ggattcgcg 501 | ||||||| Sbjct: 922 gtattcgcg 914
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 248 bits (125), Expect = 1e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||||||| | | || Sbjct: 1837 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaacgaaacgatg 1778 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1777 gcaactaaacaagagggttgcgctcgttgcgggactgaacccaacaccttacggcacgag 1718 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1717 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctccctttcaaga 1659 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1658 ggattcgcg 1650
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 248 bits (125), Expect = 1e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||||||| | | || Sbjct: 1712 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaacgaaacgatg 1653 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1652 gcaactaaacaagagggttgcgctcgttgcgggactgaacccaacaccttacggcacgag 1593 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1592 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctccctttcaaga 1534 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1533 ggattcgcg 1525
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 248 bits (125), Expect = 1e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||||||| | | || Sbjct: 1760 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaacgaaacgatg 1701 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1700 gcaacttaacacgagggttgcgctcgttgcgggactgaacccaacaccttacggcacgag 1641 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1640 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctccctttcaaga 1582 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1581 ggattcgcg 1573
>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene Length = 1990 Score = 248 bits (125), Expect = 1e-62 Identities = 175/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| |||| || |||||||||||||||||||| | | || Sbjct: 1383 atcctcaccttcctccggcttatcacccgcagtctgttcagggttccaaacgaaacgatg 1324 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1323 gcaactaaacacgagggttgcgctcgttgcgggactgaacccaacaccttacggcacgag 1264 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1263 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctccctttcaaga 1205 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1204 ggattcgcg 1196
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 246 bits (124), Expect = 6e-62 Identities = 164/176 (93%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||||| ||| || || Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaagctcgatgatg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1054 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttc 488 ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| Sbjct: 994 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcttctctttc 939
>gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 691 Score = 246 bits (124), Expect = 6e-62 Identities = 164/176 (93%), Gaps = 1/176 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtg 372 |||||| ||||||||||||||| ||||||| |||||||||||||||||| ||| || || Sbjct: 386 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaagctcgatgatg 327 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 326 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 267 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttc 488 ||||||||||||||||||||||||||||||||||||||| ||||| | |||||||| Sbjct: 266 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcttctctttc 211
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 244 bits (123), Expect = 2e-61 Identities = 171/185 (92%), Gaps = 4/185 (2%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| |||||||| |||||| ||||||| ||||| ||||||||||||| |||| || Sbjct: 1226 atcctcaccttcctctggcttatcaccggcagtctgctcagggttccaaa---atag-gg 1171 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 1170 caactaaacacgagggttgcgctcgttaggggacttaacccaacaccttacggcacgagc 1111 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 1110 tgacgacagccatgcaccacctgtgtccacgttcccgaaggcacccctctctttcaagag 1051 Query: 494 gattc 498 ||||| Sbjct: 1050 gattc 1046
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 244 bits (123), Expect = 2e-61 Identities = 166/179 (92%), Gaps = 1/179 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||||||||| ||||||| ||||||| ||||||||||||| | || ||||||||| Sbjct: 1103 ccttcctccggcttatcaccggcagtctgtttagggttccaaactgaataatggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1043 aacacgggggttgcgctcgttgcgggacttaacccaacacctcacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattc 498 |||||||||||||||||||||||||||||||| ||||| || |||| |||||||||||| Sbjct: 983 cagccatgcaccacctgtgtccgcgttcccgaaggcactcccctctctcaagaggattc 925
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 242 bits (122), Expect = 9e-61 Identities = 172/186 (92%), Gaps = 2/186 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 1108 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactaaatgatg 1049 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1048 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 989 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||| Sbjct: 988 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcactcctccctttcaagg 930 Query: 493 ggattc 498 |||||| Sbjct: 929 ggattc 924
>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence Length = 1443 Score = 242 bits (122), Expect = 9e-61 Identities = 150/158 (94%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 1106 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcaataatg 1047 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1046 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 987 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccg 470 |||||||||||||||||||||||||||||||| ||||| Sbjct: 986 ctgacgacagccatgcaccacctgtgtccgcgctcccg 949
>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 240 bits (121), Expect = 4e-60 Identities = 167/181 (92%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactc-atagtggcaacta 379 |||||||||||||| ||||||| ||||||| ||||||||||||| ||||||||||||| Sbjct: 1129 ccttcctccggcttgtcaccggcagtctgtttagggttccaaacttgatagtggcaacta 1070 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 1069 aacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgagctgacga 1010 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||| |||||||||| ||| | |||||||||| |||| ||||| Sbjct: 1009 cagccatgcaccacctgtgtctgcgttcccgaaggcgctcctctctttcgagagaattcg 950 Query: 500 c 500 | Sbjct: 949 c 949
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 240 bits (121), Expect = 4e-60 Identities = 172/188 (91%), Gaps = 2/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||||||||| |||||||||| |||||||||| | ||| Sbjct: 1127 atcctcaccttcctccggcttaacaccgatagtctgttcagagttccaaact--ttatgg 1070 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 1069 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttgcggcacgaac 1010 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| || Sbjct: 1009 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcctctttttcaaaag 950 Query: 494 gattcgcg 501 |||||||| Sbjct: 949 gattcgcg 942
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 240 bits (121), Expect = 4e-60 Identities = 174/189 (92%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||| ||||| ||||||| |||||||||||||||||||| | | || Sbjct: 1385 atcctcaccttcctcccgcttatcaccggcagtctgttcagggttccaaacgaaacgatg 1326 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 1325 gcaactaaacaagagggttgcgctcgttgcgggactgaacccaacaccttacggcacgag 1266 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 1265 ctgacgacagccatgcaccacctgtgtccgcgttcccga-agcacccctccctttcaaga 1207 Query: 493 ggattcgcg 501 ||||||||| Sbjct: 1206 ggattcgcg 1198
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 131055 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcagtaatg 131114 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 131115 gcaactaaacacgagggttgcgctcgttgcgggacttaacctaacaccttacggcacgag 131174 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccga 471 |||||||||||||||||||||||||||| |||||||||| Sbjct: 131175 ctgacgacagccatgcaccacctgtgtctgcgttcccga 131213 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 92392 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcagtaatg 92333 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 92332 gcaactaaacacgagggttgcgctcgttgcgggacttaacctaacaccttacggcacgag 92273 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccga 471 |||||||||||||||||||||||||||| |||||||||| Sbjct: 92272 ctgacgacagccatgcaccacctgtgtctgcgttcccga 92234
>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 236 bits (119), Expect = 6e-59 Identities = 150/159 (94%), Gaps = 1/159 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 1114 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcagtaatg 1055 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 1054 gcaactaaacacgagggttgcgctcgttgcgggacttaacctaacaccttacggcacgag 995 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccga 471 |||||||||||||||||||||||||||| |||||||||| Sbjct: 994 ctgacgacagccatgcaccacctgtgtctgcgttcccga 956
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 234 bits (118), Expect = 2e-58 Identities = 127/130 (97%) Strand = Plus / Plus Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 55110 ggcaactaaacacgagggttgcgctcgttacgggacttaacccaacaccttacggcacga 55169 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 55170 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 55229 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 55230 aggattcgcg 55239 Score = 234 bits (118), Expect = 2e-58 Identities = 127/130 (97%) Strand = Plus / Minus Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 34718 ggcaactaaacacgagggttgcgctcgttacgggacttaacccaacaccttacggcacga 34659 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 34658 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 34599 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 34598 aggattcgcg 34589
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 234 bits (118), Expect = 2e-58 Identities = 164/178 (92%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 118869 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaacttaatgatg 118928 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118929 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 118988 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 118989 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcttttctttcaa 119046 Score = 234 bits (118), Expect = 2e-58 Identities = 164/178 (92%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||| | | || Sbjct: 83251 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaacttaatgatg 83192 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 83191 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 83132 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||| Sbjct: 83131 ctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcttttctttcaa 83074
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 234 bits (118), Expect = 2e-58 Identities = 127/130 (97%) Strand = Plus / Minus Query: 372 ggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacga 431 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 1646 ggcaactaaacacgagggttgcgctcgttacgggacttaacccaacaccttacggcacga 1587 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaag 491 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1586 gctgacgacagccatgcaccacctgtgtccgcgttcccgaaggcacccctctctttcaag 1527 Query: 492 aggattcgcg 501 |||||||||| Sbjct: 1526 aggattcgcg 1517
>gb|AF445656.1| Uncultured eukaryote clone SM1B08 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 1475 Score = 232 bits (117), Expect = 9e-58 Identities = 171/188 (90%), Gaps = 2/188 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||||||||| |||||||||| |||||||||| | ||| Sbjct: 1154 atcctcaccttcctccggcttaacaccgatagtctgttcagagttccaaact--ttatgg 1097 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 1096 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttgcggcacgaac 1037 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 ||||||||||||||||||||||||||||| |||||||| ||||| ||||| |||||| || Sbjct: 1036 tgacgacagccatgcaccacctgtgtccgtgttcccgaaggcactcctctttttcaaaag 977 Query: 494 gattcgcg 501 |||||||| Sbjct: 976 gattcgcg 969
>gb|U24583.1|DMU24583 Doodia maxima chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 232 bits (117), Expect = 9e-58 Identities = 166/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||| ||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 1103 ccttcctccagcttatcaccggcagtctgtttagggttccaaacttggtagtggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1043 aacacgggggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||| |||||||| | ||| | ||||| ||||||||||||||| Sbjct: 983 cagccatgcaccacctgtgtctgcgttcccaaaggcgctcctctttttcaagaggattcg 924 Query: 500 c 500 | Sbjct: 923 c 923
>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence Length = 1436 Score = 226 bits (114), Expect = 5e-56 Identities = 148/158 (93%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| || || Sbjct: 1121 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccaaactcagtaatg 1062 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 1061 gcaactaaacacgagggttgcgctcgttgcgggacttaacctaacaccttacggcacgag 1002 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccg 470 |||||||||||||||||||||||||||| | ||||||| Sbjct: 1001 ctgacgacagccatgcaccacctgtgtctgtgttcccg 964
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 224 bits (113), Expect = 2e-55 Identities = 165/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 |||||||||||||| ||||||| |||||| ||||||||||||| || ||||||||| Sbjct: 141084 ccttcctccggcttgtcaccggcagtctgtctagggttccaaacttggtaatggcaacta 141025 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141024 aacacgggggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 140965 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 140964 cagccatgcaccacctgtgtctgcgttcccgaaggcgctcccctctttcaagaggattcg 140905 Query: 500 c 500 | Sbjct: 140904 c 140904 Score = 224 bits (113), Expect = 2e-55 Identities = 165/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Plus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 |||||||||||||| ||||||| |||||| ||||||||||||| || ||||||||| Sbjct: 91767 ccttcctccggcttgtcaccggcagtctgtctagggttccaaacttggtaatggcaacta 91826 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 91827 aacacgggggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 91886 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 ||||||||||||||||||||| |||||||||| ||| | || |||||||||||||||||| Sbjct: 91887 cagccatgcaccacctgtgtctgcgttcccgaaggcgctcccctctttcaagaggattcg 91946 Query: 500 c 500 | Sbjct: 91947 c 91947
>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1481 Score = 224 bits (113), Expect = 2e-55 Identities = 153/165 (92%), Gaps = 1/165 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||||| |||||||| |||||| | || Sbjct: 1133 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccgaactcagttatg 1074 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1073 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 1014 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcac 477 ||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1013 ctggcgacagccatgcaccacctgtgtccgcgttcccgaaggcac 969
>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence Length = 1437 Score = 224 bits (113), Expect = 2e-55 Identities = 165/181 (91%), Gaps = 1/181 (0%) Strand = Plus / Minus Query: 321 ccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtggcaacta 379 ||||||||||||||| ||||||| ||||||| |||||||||| | | || ||||||||| Sbjct: 1103 ccttcctccggcttatcaccggcagtctgtttagggttccaatttgagtaatggcaacta 1044 Query: 380 aacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacga 439 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1043 aacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacga 984 Query: 440 cagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcg 499 |||||||||||||||||| ||| ||||||||| ||||| ||| | |||||| |||||||| Sbjct: 983 cagccatgcaccacctgtatccacgttcccgaaggcactcctttttttcaaaaggattcg 924 Query: 500 c 500 | Sbjct: 923 c 923
>gb|AF141146.1|AF141146 Vigna unguiculata clone TV72NBS3 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 378 Score = 220 bits (111), Expect = 3e-54 Identities = 139/147 (94%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||| | || Sbjct: 161 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactcaatcttg 102 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 42 Query: 433 ctgacgacagccatgcaccacctgtgt 459 ||||||||||||||||||||||||||| Sbjct: 41 ctgacgacagccatgcaccacctgtgt 15
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 218 bits (110), Expect = 1e-53 Identities = 147/158 (93%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||||| ||||||| ||||||| |||||||| ||||| | || Sbjct: 1110 atcctcaccttcctccggcttatcaccggcagtctgtttagggttccggactcagtgatg 1051 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1050 gcaactaaacaagagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 991 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccg 470 |||||||||||||||||||||||||||||||||||||| Sbjct: 990 ctgacgacagccatgcaccacctgtgtccgcgttcccg 953
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 218 bits (110), Expect = 1e-53 Identities = 134/142 (94%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 114300 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcataatgg 114241 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||| ||| |||||||| |||||||||||||| |||||||||||| ||||||| Sbjct: 114240 caactaaacatgagtgttgcgcttgttgcgagacttaaaccaacaccttacaacacgagc 114181 Query: 434 tgacgacagccatgcaccacct 455 |||||||| ||||||||||||| Sbjct: 114180 tgacgacaaccatgcaccacct 114159
>gb|AF141142.1|AF141142 Vigna unguiculata clone VU124NBS2 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 586 Score = 218 bits (110), Expect = 1e-53 Identities = 138/146 (94%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| |||||||| |||||| ||||||| ||||| |||||||||||||||||| ||| Sbjct: 583 atcctcaccttcctc-ggcttatcaccggcagtctgctcagggttccaaactcatcttgg 525 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 524 caactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgagc 465 Query: 434 tgacgacagccatgcaccacctgtgt 459 |||||||||||||||||||||||||| Sbjct: 464 tgacgacagccatgcaccacctgtgt 439
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 214 bits (108), Expect = 2e-52 Identities = 168/188 (89%), Gaps = 5/188 (2%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| |||||| |||||||| | |||| Sbjct: 147843 atcctcaccttcctccggcttatcaccggcagtctgtctagggttcctt-----ttgtgg 147897 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 147898 caactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgagc 147957 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||| | Sbjct: 147958 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcccccctttcaaggg 148017 Query: 494 gattcgcg 501 |||||||| Sbjct: 148018 gattcgcg 148025
>gb|DQ494144.1| Uncultured cyanobacterium 16S ribosomal RNA gene, partial sequence Length = 414 Score = 212 bits (107), Expect = 8e-52 Identities = 156/172 (90%), Gaps = 2/172 (1%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||| ||| ||||||| |||| |||||||||||||||||| | || Sbjct: 199 atcctcaccttcctccggnttatcaccggcagtctnttcagggttccaaactcaacggtg 140 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaaca-ccttacggcacga 431 |||||||||||| |||||||||||||||||| |||||||||||||| ||| ||| ||||| Sbjct: 139 gcaactaaacacnagggttgcgctcgttgcgggacttaacccaacatcctnacgncacga 80 Query: 432 gctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctct 483 ||||||||||||||||||||||||||||| | |||||||| ||||||||||| Sbjct: 79 gctgacgacagccatgcaccacctgtgtcngngttcccgaaggcacccctct 28
>gb|AY387369.1| Uncultured eukaryote clone OT124 16S ribosomal RNA gene, partial sequence Length = 1056 Score = 212 bits (107), Expect = 8e-52 Identities = 113/115 (98%) Strand = Plus / Minus Query: 387 gggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacgacagccat 446 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 gggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacgacagccat 997 Query: 447 gcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcg 501 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 996 gcaccacctgtgtccgcgttcccgaaggcacccctctctttcaagaggattcgcg 942
>gb|AF393589.1| Cosmarium botrytis small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1406 Score = 212 bits (107), Expect = 8e-52 Identities = 169/188 (89%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| |||||| |||||||| || |||| Sbjct: 1107 atcctcaccttcctccggcttatcaccggcagtctgtctagggttcctt-ct----gtgg 1053 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1052 caactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgagc 993 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagag 493 |||||||||||||||||||||||||||||||||||||| ||||| || | |||||||| | Sbjct: 992 tgacgacagccatgcaccacctgtgtccgcgttcccgaaggcactcccccctttcaaggg 933 Query: 494 gattcgcg 501 |||||||| Sbjct: 932 gattcgcg 925
>gb|AF141149.1|AF141149 Vigna unguiculata clone TV72NBS4 16S ribosomal RNA gene, partial sequence Length = 397 Score = 212 bits (107), Expect = 8e-52 Identities = 138/147 (93%), Gaps = 1/147 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||| ||||||||||||||| | || | Sbjct: 178 atcctcaccttcctccggcttatcaccggcagtctgctcagggttccaaactaaatgttg 119 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacaccttacggcacgag 59 Query: 433 ctgacgacagccatgcaccacctgtgt 459 ||||||||||||||||||||||||||| Sbjct: 58 ctgacgacagccatgcaccacctgtgt 32
>gb|AY100594.1| Uncultured bacterium clone cvf116009 16S ribosomal RNA gene, partial sequence Length = 680 Score = 210 bits (106), Expect = 3e-51 Identities = 167/186 (89%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagt-g 372 |||||| ||||||||||||||| ||||||| ||||||||||||||||||||| | || | Sbjct: 398 atcctcaccttcctccggcttatcaccggcagtctgttcagggttccaaactaaatgttg 339 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| ||||||||||||||||| | |||| |||||||||||||||||| ||| Sbjct: 338 gcaactaaacatgagggttgcgctcgttgtgggactctacccaacaccttacggcatgag 279 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||| || ||||||| ||||| |||||||||| || Sbjct: 278 ctgacgacagccatgcaccacctgtgtctgcattcccgaaggcactcctctctttcggga 219 Query: 493 ggattc 498 |||||| Sbjct: 218 ggattc 213
>gb|AY661656.1| Sorghum bicolor clone BAC 88M4, complete sequence Length = 279448 Score = 202 bits (102), Expect = 8e-49 Identities = 111/113 (98%), Gaps = 2/113 (1%) Strand = Plus / Plus Query: 391 tgcgctcgttgcgagacttaacccaacac--cttacggcacgagctgacgacagccatgc 448 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145468 tgcgctcgttgcgagacttaacccaacacaccttacggcacgagctgacgacagccatgc 145527 Query: 449 accacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcg 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145528 accacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcg 145580
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 202 bits (102), Expect = 8e-49 Identities = 166/186 (89%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| || |||||||||| | ||||| ||||||| |||||||||| | || | || Sbjct: 140657 atcctcaccctcctccggctcctcgccggcagtctgtttagggttccaagcccaatgatg 140716 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 140717 gcaactagacacgagggttgcgctcgttgcgggactcaacccaacacctcacggcacgag 140776 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 140777 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcctctctctcaaga 140836 Query: 493 ggattc 498 ||||| Sbjct: 140837 agattc 140842 Score = 202 bits (102), Expect = 8e-49 Identities = 166/186 (89%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| || |||||||||| | ||||| ||||||| |||||||||| | || | || Sbjct: 81220 atcctcaccctcctccggctcctcgccggcagtctgtttagggttccaagcccaatgatg 81161 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||| Sbjct: 81160 gcaactagacacgagggttgcgctcgttgcgggactcaacccaacacctcacggcacgag 81101 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 81100 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcactcctctctctcaaga 81041 Query: 493 ggattc 498 ||||| Sbjct: 81040 agattc 81035
>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long terminal repeat, complete sequence Length = 7731 Score = 198 bits (100), Expect = 1e-47 Identities = 211/239 (88%), Gaps = 8/239 (3%) Strand = Plus / Minus Query: 57 aacgctataagaagggccaagcaagcagtaacatagccaaacaaaggtttgctcggatgt 116 ||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||| | Sbjct: 2978 aacgctataagaagggctgagcaagcagtaacatagccaaac-aatgtttgctgggatct 2920 Query: 117 ggaggggttagaggcttttcatggaaatgtagggaggcttgacataacaggtggtagata 176 |||||||||||||||||||||||| ||| | |||||||||||||| ||| ||||||| || Sbjct: 2919 ggaggggttagaggcttttcatggcaat-ttgggaggcttgacat-aca-gtggtaggta 2863 Query: 177 gcgagacatagcgatagaactgacacaactagcatagcaatgatagtactggtatatagg 236 ||||||| |||||||||| || ||||||||||| |||||||||||| |||||| ||| Sbjct: 2862 gcgagac--agcgatagaaacgagacaactagcatggcaatgatagtaatggtatccagg 2805 Query: 237 gaaat-gatcatattgcctg-gatccagcatggaagaagaacgaatccgtgaagtagac 293 ||||| | |||| ||||||| ||||| || |||||||||||||||||||||||| |||| Sbjct: 2804 gaaatgggtcatcttgcctgagatcccgcttggaagaagaacgaatccgtgaagaagac 2746
>gb|AY942956.1| Uncultured Pseudomonas sp. clone 29 16S ribosomal RNA gene, partial sequence Length = 960 Score = 198 bits (100), Expect = 1e-47 Identities = 112/116 (96%) Strand = Plus / Minus Query: 386 agggttgcgctcgttgcgagacttaacccaacaccttacggcacgagctgacgacagcca 445 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 agggttgcgctcgttgcgggacttaacccaacaccttacggcacgagctgacgacagcca 525 Query: 446 tgcaccacctgtgtccgcgttcccgagggcacccctctctttcaagaggattcgcg 501 |||||||||||||||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 524 tgcaccacctgtgtccgcgttcccgaaggcactccgctctttcaagaggattcgcg 469
>gb|U67743.1|CCU67743 Cynomorium coccineum chloroplast 16S ribosomal RNA gene, partial sequence Length = 1398 Score = 196 bits (99), Expect = 5e-47 Identities = 123/131 (93%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1024 tggcaactaaacatgagggttgcgctcgttaggggacttaacccaacaccttacggcacg 965 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| | Sbjct: 964 agctgacgacagccatgcaccacctgtgtccacgttcccgagggcacccctatctttcga 905 Query: 491 gaggattcgcg 501 |||||||||| Sbjct: 904 taggattcgcg 894
>gb|AF244555.1|AF244555 Gnetum leyboldii 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1448 Score = 194 bits (98), Expect = 2e-46 Identities = 165/186 (88%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| ||||||||||||| | | || |||||||||| |||||||||||||| | || Sbjct: 1131 atcctcaccttcctccggctcatcgccagcggtctgtttagggttccaaactccacgatg 1072 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1071 gcaactaaacaaaagggttgcgctcgttgcgggacttaacccaacaccctacggcacgag 1012 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||| ||| |||||||| ||||| | || |||||| || Sbjct: 1011 ctgacgacagccatgcaccacctgtggccgtgttcccgaaggcactcttccctttcagga 952 Query: 493 ggattc 498 |||||| Sbjct: 951 ggattc 946
>gb|AF393611.1| Spirogyra maxima small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 192 bits (97), Expect = 8e-46 Identities = 140/155 (90%), Gaps = 7/155 (4%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||| |||||||| | |||| Sbjct: 1104 atcctcaccttcctccggcttatcaccggcagtctgtttagggttcc-------ttgtgg 1052 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1051 caactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgagc 992 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcc 468 |||||||||||||||||||||||||||| |||||| Sbjct: 991 tgacgacagccatgcaccacctgtgtccacgttcc 957
>gb|U24596.1|SMU24596 Spirogyra maxima chloroplast 16S rRNA gene, complete sequence Length = 1657 Score = 192 bits (97), Expect = 8e-46 Identities = 140/155 (90%), Gaps = 7/155 (4%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatagtgg 373 |||||| ||||||||||||||| ||||||| ||||||| |||||||| | |||| Sbjct: 1231 atcctcaccttcctccggcttatcaccggcagtctgtttagggttcc-------ttgtgg 1179 Query: 374 caactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgagc 433 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1178 caactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgagc 1119 Query: 434 tgacgacagccatgcaccacctgtgtccgcgttcc 468 |||||||||||||||||||||||||||| |||||| Sbjct: 1118 tgacgacagccatgcaccacctgtgtccacgttcc 1084
>gb|AF355383.1| Microcoleus steenstrupii clone 152-2A 16S ribosomal RNA gene, partial sequence Length = 989 Score = 188 bits (95), Expect = 1e-44 Identities = 122/131 (93%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 730 tggcaactaaagacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 671 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||||| Sbjct: 670 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctctctttcaa 611 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 610 gaggattcgcg 600
>gb|U24591.1|SAU24591 Selaginella apoda chloroplast 16S rRNA gene, partial sequence Length = 1446 Score = 188 bits (95), Expect = 1e-44 Identities = 167/189 (88%), Gaps = 4/189 (2%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactcatag-tg 372 |||||| || |||||||||| | | ||||| || |||| |||||||||| | || | || Sbjct: 1119 atcctcaccctcctccggctcatcgccggcagtatgtttagggttccaagcccaatgatg 1060 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||| Sbjct: 1059 gcaactaaacacgagggttgcgctcgttgcgggactcaacccaacgcctcacggcacgag 1000 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccg---agggcacccctctctttca 489 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| Sbjct: 999 ctgacgacagccatgcaccacctgtgtccgtgttcccggctagggcacccctctctctca 940 Query: 490 agaggattc 498 ||||||||| Sbjct: 939 agaggattc 931
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 186 bits (94), Expect = 5e-44 Identities = 158/178 (88%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| |||| || ||||| || |||| | || || Sbjct: 116367 atcctcaccttcctccggcttatcaccggcagtctttttagggtgcccaacttaatactg 116426 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||||| Sbjct: 116427 gcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgag 116486 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 |||||||||||||||||||||||||||||||| |||||| ||||| | | |||||||| Sbjct: 116487 ctgacgacagccatgcaccacctgtgtccgcgctcccgaaggcactcttttctttcaa 116544 Score = 186 bits (94), Expect = 5e-44 Identities = 158/178 (88%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| |||| || ||||| || |||| | || || Sbjct: 85621 atcctcaccttcctccggcttatcaccggcagtctttttagggtgcccaacttaatactg 85562 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||||| Sbjct: 85561 gcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgag 85502 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 |||||||||||||||||||||||||||||||| |||||| ||||| | | |||||||| Sbjct: 85501 ctgacgacagccatgcaccacctgtgtccgcgctcccgaaggcactcttttctttcaa 85444
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 186 bits (94), Expect = 5e-44 Identities = 164/186 (88%), Gaps = 1/186 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaact-catagtg 372 |||||| ||||||||||||| | | || || ||||||| ||||||||||||| || || Sbjct: 1101 atcctcaccttcctccggctcatcgccagcagtctgtttagggttccaaactacacgatg 1042 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 1041 gcaactaaacaaaagggttgcgctcgttgcgggacttaacccaacaccctacggcacgag 982 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||| |||||||| ||||| || | ||||| || Sbjct: 981 ctgacgacagccatgcaccacctgtgtccgtgttcccgaaggcactcccccttttcagga 922 Query: 493 ggattc 498 |||||| Sbjct: 921 ggattc 916
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Minus Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 94161 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 94102 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||| | ||||| | || |||||| || Sbjct: 94101 ctgacgacagccatgcaccacctgtgtccgcgttccctaaggcactcttccctttcagga 94042 Query: 493 ggattcgcg 501 |||||||| Sbjct: 94041 agattcgcg 94033
>gb|AF497790.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 819 Score = 184 bits (93), Expect = 2e-43 Identities = 166/189 (87%), Gaps = 1/189 (0%) Strand = Plus / Minus Query: 314 atcctctccttcctccggcttaacaccggcggtctgttcagggttccaaactca-tagtg 372 |||||| ||||||||||||||| ||||||| |||| || ||||| || ||| | || || Sbjct: 791 atcctcaccttcctccggcttatcaccggcagtctctttagggtgcccaaccaaatactg 732 Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||||| Sbjct: 731 gcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacgag 672 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 |||||||||||||||||||||||||||||||| || | | ||||| | |||||||||||| Sbjct: 671 ctgacgacagccatgcaccacctgtgtccgcgctcacaaaggcactcttctctttcaaga 612 Query: 493 ggattcgcg 501 |||||||| Sbjct: 611 agattcgcg 603
>gb|AF497789.1| Zygnema sp. KA-2002 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 808 Score = 184 bits (93), Expect = 2e-43 Identities = 120/129 (93%) Strand = Plus / Minus Query: 373 gcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacgag 432 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 728 gcaactaaacacgagggttgcgctcgttgcgggacttaacccaacacctcacggcacgag 669 Query: 433 ctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaaga 492 ||||||||||||||||||||||||||||||||||||| | ||||| | || |||||| || Sbjct: 668 ctgacgacagccatgcaccacctgtgtccgcgttccctaaggcactcttccctttcagga 609 Query: 493 ggattcgcg 501 |||||||| Sbjct: 608 agattcgcg 600
>gb|U67740.1|BAU67740 Bdallophyton americanum chloroplast 16S ribosomal RNA gene, partial sequence Length = 1483 Score = 182 bits (92), Expect = 7e-43 Identities = 117/124 (94%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 345 gtctgttcagggttccaaactcatagtggcaactaaacacgagggttgcgctcgttgcga 404 |||||||||| ||||||| || | | ||||||||||||| |||||||||||||||||||| Sbjct: 1132 gtctgttcagagttccaa-ctgacaatggcaactaaacatgagggttgcgctcgttgcga 1074 Query: 405 gacttaacccaacaccttacggcacgagctgacgacagccatgcaccacctgtgtccgcg 464 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1073 gacttaacccaacaccttacggcacgagctgacgacagccatgcaccacctgtgtccacg 1014 Query: 465 ttcc 468 |||| Sbjct: 1013 ttcc 1010
>gb|AF218370.1| Arthronema gygaxiana UTCC 393 16S ribosomal RNA gene, partial sequence Length = 1388 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1024 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 965 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 964 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 905 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 904 gaggattcgcg 894
>gb|AY218828.1| Nostoc muscorum CENA61 16S ribosomal RNA gene, partial sequence Length = 1338 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1030 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 971 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| | |||||||||| Sbjct: 970 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcttctctttcaa 911 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 910 gaggattcgcg 900
>gb|AY239603.1| Leptolyngbya sp. CNP1-B1-4 16S ribosomal RNA gene, partial sequence Length = 1010 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 751 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 692 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 691 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 632 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 631 gaggattcgcg 621
>gb|AY239600.1| Leptolyngbya sp. CNP1-B3-C9 16S ribosomal RNA gene, partial sequence Length = 1009 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||| ||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 750 tggcaactaaaaacgtgggttgcgctcgttgcgggacttaacccaacatctcacgacacg 691 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||||||||||| Sbjct: 690 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctctctttcaa 631 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 630 gaggattcgcg 620
>gb|AF132778.1| Pseudanabaena sp. PCC 6903 small subunit ribosomal RNA gene, partial sequence Length = 1407 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1046 tggcaactaaatacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 987 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 986 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 927 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 926 gaggattcgcg 916
>gb|AF132787.1| Pseudanabaena sp. PCC 7402 small subunit ribosomal RNA gene, partial sequence Length = 1179 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 817 tggcaactaaatacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 758 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 757 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 698 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 697 gaggattcgcg 687
>gb|AF355398.1| Leptolyngbya schmidlei clone 145-A3 16S ribosomal RNA gene, partial sequence Length = 988 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 729 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 670 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 669 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 610 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 609 gaggattcgcg 599
>gb|DQ378254.1| Uncultured soil bacterium clone M37_Pitesti 16S ribosomal RNA gene, complete sequence Length = 1458 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1080 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 1021 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| |||||| Sbjct: 1020 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcag 961 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 960 gaggattcgcg 950
>gb|DQ062876.1| Uncultured cyanobacterium clone PENP 76 16S ribosomal RNA gene, partial sequence Length = 645 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 510 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 451 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| |||||| Sbjct: 450 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcag 391 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 390 gaggattcgcg 380
>gb|DQ062874.1| Uncultured bacterium clone PENP 68 16S ribosomal RNA gene, partial sequence Length = 628 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 515 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 456 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| |||||| Sbjct: 455 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcag 396 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 395 gaggattcgcg 385
>emb|AJ630647.1| Oscillatoriales cyanobacterium UVFP3 partial 16S rRNA gene, strain UVFP3 Length = 1395 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1041 tggcaactaaagacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 982 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 981 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 922 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 921 gaggattcgcg 911
>gb|AF355369.1| Microcoleus vaginatus isolate FB2-MC3 clone 187-1A 16S ribosomal RNA gene, partial sequence Length = 1001 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 742 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 683 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| ||||| |||| | Sbjct: 682 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctctgtttcca 623 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 622 gaggattcgcg 612
>gb|AF355353.1| Microcoleus vaginatus isolate FB2-MC1 16S ribosomal RNA gene, partial sequence Length = 1001 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 742 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 683 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| ||||| |||| | Sbjct: 682 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctctgtttcca 623 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 622 gaggattcgcg 612
>gb|AF355341.1| Microcoleus vaginatus isolate BSA-1a clone 149-4B 16S ribosomal RNA gene, partial sequence Length = 1001 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||||||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 742 tggcaactaaacacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 683 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| ||||| |||| | Sbjct: 682 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcacgcctctgtttcca 623 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 622 gaggattcgcg 612
>gb|DQ185240.1| Nostoc sp. PCC 6720 16S ribosomal RNA gene, partial sequence Length = 1422 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1043 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 984 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||| | ||||| |||||||||||| Sbjct: 983 agctgacgacagccatgcaccacctgtgttcgcgctccctaaggcactcctctctttcaa 924 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 923 gaggattcgcg 913
>gb|DQ185207.1| Nostoc sp. 'Mollenhauer 1:1-067' 16S ribosomal RNA gene, partial sequence Length = 1423 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1050 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 991 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||||| Sbjct: 990 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcacccctccctttcaa 931 Query: 491 gaggattcgcg 501 |||| |||||| Sbjct: 930 gagggttcgcg 920
>dbj|AB074504.1| Calothrix brevissima gene for 16S ribosomal RNA, partial sequence Length = 1441 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 1049 tggcaactaaaaacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 990 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 989 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 930 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 929 gaggattcgcg 919
>dbj|AB042971.1| Phormidium tenue (strain:A) gene for 16S rRNA, partial sequence Length = 853 Score = 180 bits (91), Expect = 3e-42 Identities = 121/131 (92%) Strand = Plus / Minus Query: 371 tggcaactaaacacgagggttgcgctcgttgcgagacttaacccaacaccttacggcacg 430 ||||||||||| ||||||||||||||||||||| |||||||||||||| || ||| |||| Sbjct: 615 tggcaactaaatacgagggttgcgctcgttgcgggacttaacccaacatctcacgacacg 556 Query: 431 agctgacgacagccatgcaccacctgtgtccgcgttcccgagggcacccctctctttcaa 490 ||||||||||||||||||||||||||||| |||| |||||| ||||| |||| ||||||| Sbjct: 555 agctgacgacagccatgcaccacctgtgttcgcgctcccgaaggcactcctccctttcaa 496 Query: 491 gaggattcgcg 501 ||||||||||| Sbjct: 495 gaggattcgcg 485 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,488,516 Number of Sequences: 3902068 Number of extensions: 3488516 Number of successful extensions: 234335 Number of sequences better than 10.0: 130994 Number of HSP's better than 10.0 without gapping: 130716 Number of HSP's successfully gapped in prelim test: 302 Number of HSP's that attempted gapping in prelim test: 62168 Number of HSP's gapped (non-prelim): 158872 length of query: 502 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 480 effective length of database: 17,147,199,772 effective search space: 8230655890560 effective search space used: 8230655890560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)