>OSR8_ORYSA (Q9LRI7) Hydrophobic protein OSR8|
          Length = 72

 Score =  120 bits (301), Expect = 2e-27
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = -3

Query: 389 ASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGSE 210
           + R CTFLEIL AIILPPLGVFLRFGCCSMEFCIC LLTILGY+PGIIYAVYVLVAL S+
Sbjct: 3   SGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVLVALDSD 62

Query: 209 DRDRDYDTLA 180
              R+Y TLA
Sbjct: 63  QYQREYHTLA 72

>RC23_ARATH (Q9M095) Hypothetical UPF0057 protein At4g30650|
          Length = 73

 Score = 82.4 bits (202), Expect = 5e-16
 Identities = 39/56 (69%), Positives = 46/56 (82%)
 Frame = -3

Query: 392 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           MAS    F EIL AI+LPPLGV L+ GCC++EF IC +LTILGYIPGIIYA+YV+V
Sbjct: 1   MASNMEVFCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56

>LT02_HORVU (Q9ARD5) Low temperature-induced protein lt101.2|
          Length = 54

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 39/53 (73%), Positives = 47/53 (88%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVA 222
           S TF+E++ AIILPP+GVFLR+G  ++EF IC LLT+LGYIPGIIYAVYVLVA
Sbjct: 3   SATFIEVILAIILPPVGVFLRYGL-AVEFWICLLLTLLGYIPGIIYAVYVLVA 54

>RCI2A_ARATH (Q9ZNQ7) Hydrophobic protein RCI2A (Low temperature and|
           salt-responsive protein LTI6A)
          Length = 54

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           + TF++I+ AI+LPPLGVFLRFGC  +EF IC +LT+LGYIPGIIYA+YVL
Sbjct: 3   TATFVDIIIAILLPPLGVFLRFGC-GVEFWICLVLTLLGYIPGIIYAIYVL 52

>RC24_ARATH (Q9SUI0) Hypothetical UPF0057 protein At4g30660|
          Length = 74

 Score = 77.8 bits (190), Expect = 1e-14
 Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -3

Query: 380 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGSEDR 204
           +C  L EI+ AI+LPPLGV  R GCC++EF IC +LTILGY+PGIIYA+YV+V    E+ 
Sbjct: 4   NCEILCEIIIAILLPPLGVCFRKGCCTVEFLICLVLTILGYVPGIIYAIYVIVFQHREEY 63

Query: 203 DRDY 192
             +Y
Sbjct: 64  FDEY 67

>RCI2B_ARATH (Q9ZNS6) Hydrophobic protein RCI2B (Low temperature and|
           salt-responsive protein LTI6B)
          Length = 54

 Score = 74.7 bits (182), Expect = 1e-13
 Identities = 32/51 (62%), Positives = 44/51 (86%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           + TF+EI+ AIILPPLGVFL+FGC  +EF IC +LT+ GY+PGI+YA+Y++
Sbjct: 3   TATFVEIILAIILPPLGVFLKFGC-KVEFWICLILTLFGYLPGILYALYII 52

>RC22_ARATH (O82232) Hypothetical UPF0057 protein At2g24040|
          Length = 75

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -3

Query: 392 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGS 213
           MAS      EI  AI+LPP+GV LR GCC++EF IC +LT LGY+PGIIYA+Y +  L  
Sbjct: 1   MASSCELCCEIFIAILLPPVGVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAICFLHR 60

Query: 212 EDRDRDY 192
           ++   +Y
Sbjct: 61  DEYFDEY 67

>LT01_HORVU (P68179) Low temperature-induced protein lt101.1 (Blt101)|
           (Blt101.1)
          Length = 54

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           S T LE++ AIILPP+GVFLR+    +EF IC LLTILGYIPGIIYAVYVLV
Sbjct: 3   SATVLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53

>ESI3_LOPEL (P68178) Salt stress-induced hydrophobic peptide ESI3|
          Length = 54

 Score = 74.3 bits (181), Expect = 1e-13
 Identities = 38/52 (73%), Positives = 43/52 (82%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           S T LE++ AIILPP+GVFLR+    +EF IC LLTILGYIPGIIYAVYVLV
Sbjct: 3   SATVLEVILAIILPPVGVFLRYKL-GVEFWICLLLTILGYIPGIIYAVYVLV 53

>LTI6A_ORYSA (Q8H5T6) Hydrophobic protein LTI6A (Low temperature-induced protein|
           6A)
          Length = 56

 Score = 72.8 bits (177), Expect = 4e-13
 Identities = 34/55 (61%), Positives = 43/55 (78%)
 Frame = -3

Query: 392 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           MA  + T ++I+ AIILPPLGVF +FGC  +EF IC LLT  GY+PGIIYAV+V+
Sbjct: 1   MADSTATCIDIILAIILPPLGVFFKFGC-GIEFWICLLLTFFGYLPGIIYAVWVI 54

>LTI6B_ORYSA (Q6AT93) Hydrophobic protein LTI6B (Low temperature-induced protein|
           6B)
          Length = 55

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = -3

Query: 368 LEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           ++IL AIILPPLGVFL+FGC   EF IC LLT LGYIPGIIYA+Y +
Sbjct: 8   IDILIAIILPPLGVFLKFGC-GHEFWICLLLTFLGYIPGIIYAIYAI 53

>RC21_ARATH (Q9FE70) Hypothetical UPF0057 protein At1g57550|
          Length = 52

 Score = 65.9 bits (159), Expect = 5e-11
 Identities = 29/49 (59%), Positives = 40/49 (81%)
 Frame = -3

Query: 374 TFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           +FLE+L AI +PP+GVFLR+G   +EF +C LLT+  +IPG+IYA+YVL
Sbjct: 3   SFLEVLCAIFIPPVGVFLRYGL-GLEFWVCLLLTLFAFIPGLIYAIYVL 50

>YCU4_CAEEL (Q22701) Hypothetical UPF0057 protein T23F2.4 in chromosome X|
          Length = 57

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -3

Query: 365 EILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVA 222
           + LFA++LPP+GVFL  GC +    IC LLTILGYIPGIIYA Y+++A
Sbjct: 10  KFLFALLLPPVGVFLEKGC-THHLAICILLTILGYIPGIIYACYIILA 56

>YCU3_CAEEL (Q22700) Hypothetical UPF0057 protein T23F2.3 in chromosome X|
          Length = 57

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -3

Query: 380 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVA 222
           +CT + + + A++LPP+GVFL  GC      IC LLTILGYIPGIIYA YV++A
Sbjct: 4   TCTDIPKFICAVLLPPIGVFLEKGC-DYHLAICILLTILGYIPGIIYACYVILA 56

>RIC1_PHYIN (Q9Y068) Protein Ric1|
          Length = 57

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 23/46 (50%), Positives = 37/46 (80%)
 Frame = -3

Query: 362 ILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           ++ ++I+PP+GVF + GC + +  I  LLT+LGYIPG+I+AVY+L+
Sbjct: 11  LICSVIIPPVGVFFQVGC-TKDLAINCLLTVLGYIPGVIHAVYILI 55

>YCU5_CAEEL (Q22702) Hypothetical UPF0057 protein T23F2.5 in chromosome X|
          Length = 57

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 29/54 (53%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
 Frame = -3

Query: 380 SCTFL-EILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVA 222
           +CT + + L A++LPP+GV+L  GC +    I  LLTILGYIPGII+A YV++A
Sbjct: 4   TCTDIPKFLCALLLPPIGVWLEKGC-TYHLAINILLTILGYIPGIIHACYVILA 56

>Y567_PSEAE (Q9I5W9) Hypothetical UPF0057 protein PA0567|
          Length = 52

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 27/47 (57%), Positives = 36/47 (76%)
 Frame = -3

Query: 368 LEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVL 228
           + IL AI+LPPLGVFL+ G     F +  LLT+LGYIPGI++AVY++
Sbjct: 4   IRILIAILLPPLGVFLQVGFGGA-FWLNILLTLLGYIPGIVHAVYII 49

>SNA4_YEAST (Q07549) Protein SNA4|
          Length = 140

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 23/60 (38%), Positives = 37/60 (61%)
 Frame = -3

Query: 371 FLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGSEDRDRDY 192
           F+  + A   PP  V LR G CS +F +  LLT+LG++PG+++A Y  + + S  R+ +Y
Sbjct: 13  FILYIVAFFFPPAAVLLRSGPCSSDFLLNVLLTLLGFLPGMLHAFY-YITITSPLRNAEY 71

>YQAE_ECOLI (P0AE42) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -3

Query: 371 FLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYV 231
           F  I+  IILPPLGV L  G     F I  LLT+LGYIPG+I+A +V
Sbjct: 3   FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48

>YQAE_ECOL6 (P0AE43) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -3

Query: 371 FLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYV 231
           F  I+  IILPPLGV L  G     F I  LLT+LGYIPG+I+A +V
Sbjct: 3   FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48

>YQAE_ECO57 (P0AE44) Hypothetical UPF0057 protein yqaE|
          Length = 52

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -3

Query: 371 FLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYV 231
           F  I+  IILPPLGV L  G     F I  LLT+LGYIPG+I+A +V
Sbjct: 3   FWRIVITIILPPLGVLLGKGF-GWAFIINILLTLLGYIPGLIHAFWV 48

>YOT0_CAEEL (P34655) Hypothetical UPF0057 protein ZK632.10 in chromosome III|
          Length = 80

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 24/51 (47%), Positives = 32/51 (62%)
 Frame = -3

Query: 377 CTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           C  L  + AI LPP+ V L  GC + +  I  LLT LG IPGII+A Y+++
Sbjct: 2   CQILLAILAIFLPPIAVLLDVGC-NCDLLINILLTCLGIIPGIIHAWYIIL 51

>SNA2_YEAST (P56508) Protein SNA2|
          Length = 79

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 22/61 (36%), Positives = 37/61 (60%)
 Frame = -3

Query: 362 ILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGSEDRDRDYDTL 183
           +  AI +PPL V+L+ G  + +  I  LL +LG+ PG+I+A+YV+     E+ +  Y  L
Sbjct: 9   VFIAIFIPPLAVWLKRGFFTKDLLINFLLFLLGFFPGLIHALYVISCHPYEENEARYSHL 68

Query: 182 A 180
           +
Sbjct: 69  S 69

>Y1169_SYNY3 (P74805) Hypothetical UPF0057 protein ssr1169|
          Length = 54

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = -3

Query: 368 LEILFAIILPPLGVFLRFGCCSMEFCICXLLTILG-YIPGIIYAVYVL 228
           ++I+ AI+LPPLGVFL+ G    +F I  LLTI G YI G+++A++V+
Sbjct: 4   VKIICAILLPPLGVFLQVG-IGKDFWINLLLTIFGLYILGLVHAIWVI 50

>YAM5_CAEEL (Q17638) Hypothetical UPF0057 protein C04G6.5 in chromosome II|
          Length = 59

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 18/54 (33%), Positives = 32/54 (59%)
 Frame = -3

Query: 392 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYV 231
           MA+ +   +E++  I LPPL ++     C +   I  +  +L ++PGI+YAVY+
Sbjct: 1   MATDADVIIEVILCIFLPPLAIWWHTKECDINVLIDIIFCLLFWLPGILYAVYI 54

>PMP3_YEAST (P87284) Plasma membrane proteolipid 3|
          Length = 55

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = -3

Query: 380 SCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           S   + I+ ++ LPP+ VFL  G    +  +  +LTIL + PG++YA+Y+++
Sbjct: 3   SAKIINIILSLFLPPVAVFLARGW-GTDCIVDIILTILAWFPGMLYALYIVL 53

>YV31_CAEEL (Q20516) Hypothetical UPF0057 protein F47B7.1 in chromosome X|
          Length = 59

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 16/53 (30%), Positives = 30/53 (56%)
 Frame = -3

Query: 392 MASRSCTFLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVY 234
           MA      +E++ AI LPPL +F+    C+M   +  +L    ++P +I+A++
Sbjct: 1   MAIEMQQIIELILAIFLPPLAIFIHGNDCNMHVAVNIILCFFFFVPAVIHALW 53

>YC19_SCHPO (O74837) Hypothetical UPF0057 protein C1183.09c in chromosome III|
          Length = 105

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 20/49 (40%), Positives = 32/49 (65%)
 Frame = -3

Query: 371 FLEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           FL I+ +  +P + V +R G C+ +F I   L  LG IPGII+A+Y+++
Sbjct: 9   FLLIVLSFFVPFIVVGIRRGFCTADFLINICLCALG-IPGIIHAIYIVI 56

>SNA3_YEAST (P14359) Protein SNA3|
          Length = 133

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = -3

Query: 368 LEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLVALGSEDRDRDYD 189
           L ++ A+ +PP+ V+ R G  + +  +  LL +L + P II+A YV+    SE   R YD
Sbjct: 23  LLMVLAVFIPPVAVWKRKGMFNRDTLLNLLLFLLLFFPAIIHACYVVYETSSE---RSYD 79

>PMP3_CANAL (Q9P824) Plasma membrane proteolipid 3 homolog|
          Length = 55

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 17/48 (35%), Positives = 31/48 (64%)
 Frame = -3

Query: 368 LEILFAIILPPLGVFLRFGCCSMEFCICXLLTILGYIPGIIYAVYVLV 225
           +E++ AI LPP+ VF++ G  +    I  +L I  + P I++A+YV++
Sbjct: 7   IEVIIAIFLPPVAVFMKCG-ATTPLWINLVLCIFIWFPAILHALYVVL 53

>SYA_METAC (Q8TU79) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 925

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +3

Query: 174 CLSKGVVVPIAVLRAER-DEHVDRVDDAGDVA 266
           CLS GV+ PI +L+ ER  + V+RV+ A  +A
Sbjct: 719 CLSTGVIGPIKILKTERIQDGVERVEFAAGIA 750

>NCLN_BRARE (Q6NZ07) Nicalin-1 precursor (Nicastrin-like protein 1)|
          Length = 572

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 57  HLQTHRKKARHRVHMETHSVDSQLPGEGLITHRIRAVAGCLSKGVVV 197
           HL++HR  ARH + M+  SV   L G G  T       G LS+   V
Sbjct: 380 HLESHRSPARHSI-MDMRSVSPSLEGAGEATTGPHVDLGKLSRNTKV 425

>RS8E_METTH (O26309) 30S ribosomal protein S8e|
          Length = 127

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +1

Query: 316 KRRKTPSGGRMMANRISRKVQLRDAIGRSRIGSGEISPLLWSGG 447
           K  K PSGGR   NR  RK +L      ++IG   +  +   GG
Sbjct: 7   KSMKKPSGGRAKMNRGKRKYELGREPAETKIGDRRVRLIRTRGG 50

>DMI1L_ORYSA (Q75LD5) Putative ion channel DMI1-like, chloroplast precursor|
          Length = 893

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 469 SFPDPRPNPRTRARERSP 416
           SFPD RP P  R+R RSP
Sbjct: 48  SFPDRRPPPTPRSRSRSP 65

>HSF4_MOUSE (Q9R0L1) Heat shock factor protein 4 (HSF 4) (Heat shock|
           transcription factor 4) (HSTF 4) (mHSF4)
          Length = 492

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 472 PSFPDPRPNPRTRARERSPPIRSEISRWRP 383
           PSF   R     R R + P +R + SRWRP
Sbjct: 104 PSFVRGREQLLERVRRKVPALRGDDSRWRP 133

>DPP6_MOUSE (Q9Z218) Dipeptidyl aminopeptidase-like protein 6|
           (Dipeptidylpeptidase VI) (Dipeptidylpeptidase 6)
           (Dipeptidyl peptidase IV-like protein) (Dipeptidyl
           aminopeptidase-related protein) (DPPX)
          Length = 804

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +1

Query: 37  GKPDGLSIYRLTERRHATESIWKHTASIRNCQARGSSRTGYELLQDV*ARV 189
           G P   S+    E    T  +  H A +  C  RGS   G +LLQ+V  R+
Sbjct: 569 GTPGSQSVTERFEVTWETVLVSSHGAVVVKCDGRGSGFQGTKLLQEVRRRL 619


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,237,263
Number of Sequences: 219361
Number of extensions: 1183604
Number of successful extensions: 4337
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 4029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4298
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)