Clone Name | rbasd1o11 |
---|---|
Clone Library Name | barley_pub |
>CP7A1_RABIT (P51542) Cytochrome P450 7A1 (EC 1.14.13.17) (Cholesterol| 7-alpha-monooxygenase) (CYPVII) (Cholesterol 7-alpha-hydroxylase) Length = 501 Score = 31.2 bits (69), Expect = 1.8 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 6/28 (21%) Frame = -2 Query: 354 WTWG------CCLWLLCSSRNKRAAGPP 289 W WG CCLWL+ R +R PP Sbjct: 6 WIWGICLSVCCCLWLILGLRRRRMGEPP 33
>GTR8_MOUSE (Q9JIF3) Solute carrier family 2, facilitated glucose transporter| member 8 (Glucose transporter type 8) (Glucose transporter type X1) Length = 477 Score = 30.0 bits (66), Expect = 4.0 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -3 Query: 518 ASVCALAVLYIAGNVVETKGRSLQEI 441 A+ CAL+VL+ V ETKGR+L+++ Sbjct: 445 AAFCALSVLFTLTVVPETKGRTLEQV 470
>GTR5_RAT (P43427) Solute carrier family 2, facilitated glucose transporter| member 5 (Glucose transporter type 5, small intestine) (Fructose transporter) Length = 502 Score = 29.6 bits (65), Expect = 5.2 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -3 Query: 518 ASVCALAVLYIAGNVVETKGRSLQEIERELSPASKV 411 A +C L +YI V ETKGR+ EI + + +KV Sbjct: 445 AIICLLTTIYIFMVVPETKGRTFVEINQIFAKKNKV 480
>GTR6_HUMAN (Q9UGQ3) Solute carrier family 2, facilitated glucose transporter| member 6 (Glucose transporter type 6) (Glucose transporter type 9) Length = 507 Score = 29.6 bits (65), Expect = 5.2 Identities = 12/27 (44%), Positives = 21/27 (77%) Frame = -3 Query: 518 ASVCALAVLYIAGNVVETKGRSLQEIE 438 A++C +++++ V ETKGRSL++IE Sbjct: 469 AAICLVSLVFTGCCVPETKGRSLEQIE 495
>CSBC_BACSU (P46333) Probable metabolite transport protein csbC| Length = 461 Score = 29.6 bits (65), Expect = 5.2 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 512 VCALAVLYIAGNVVETKGRSLQEIERELSPASKVDASNAFLVSDE 378 +C L+ + V ETKG+SL+EIE L K S V +E Sbjct: 414 ICLLSFFFAFYMVPETKGKSLEEIEASLKKRFKKKKSTQNQVLNE 458
>GGT1_PIG (P20735) Gamma-glutamyltranspeptidase 1 precursor (EC 2.3.2.2)| (Gamma-glutamyltransferase 1) (GGT 1) (CD224 antigen) [Contains: Gamma-glutamyltranspeptidase 1 heavy chain; Gamma-glutamyltranspeptidase 1 light chain] Length = 568 Score = 29.6 bits (65), Expect = 5.2 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 12/58 (20%) Frame = -2 Query: 345 GCCLWLLCSSR-----NKRAAGPPDAIR-------TDRDSGFAVSASKAQLLLITSQN 208 G CLWL +S+ RAA DA+R T RD G AV A+ A LL + N Sbjct: 21 GLCLWLPSNSKPHNHVYPRAAVAADALRCSEIGRDTLRDGGSAVDAAIAALLCVGLMN 78
>MYCT_HUMAN (Q96QE2) Proton myo-inositol cotransporter (H(+)-myo-inositol| cotransporter) (Hmit) Length = 629 Score = 28.9 bits (63), Expect = 8.9 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -3 Query: 518 ASVCALAVLYIAGNVVETKGRSLQEIE 438 A A+ +L+I G + ETKG+ L+EIE Sbjct: 561 AGFAAVGLLFIYGCLPETKGKKLEEIE 587
>YFIG_BACSU (P54723) Hypothetical metabolite transport protein yfiG| Length = 482 Score = 28.9 bits (63), Expect = 8.9 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = -3 Query: 503 LAVLYIAGNVVETKGRSLQEIE 438 LA+L++ V ETKGRSL+++E Sbjct: 439 LAILFVKKYVPETKGRSLEQLE 460
>SYS_PYRAE (Q8ZTP4) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 451 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/70 (25%), Positives = 29/70 (41%) Frame = +2 Query: 248 DTANPESRSVRMASGGPAARLFRELHKSQRQHPQVQGRLCSMLIRRSPKRRYLHRLCWPG 427 D P ++ + P+ ++REL RL + R+ KR Y+H L G Sbjct: 342 DLGAPAAKKYDIEVWYPSQGMYRELASCSNVTDWQSYRLGIRVTRKGMKREYVHTLNCTG 401 Query: 428 LVPARSLVGI 457 L R++ I Sbjct: 402 LATTRTITAI 411 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,162,950 Number of Sequences: 219361 Number of extensions: 1297001 Number of successful extensions: 3291 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3283 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)