ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1o04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase 40 0.008
2MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI) 37 0.041
3UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-f... 37 0.054
4MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI) 36 0.092
5TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger ... 35 0.16
6TNNT_CAEEL (Q27371) Troponin T 35 0.16
7Y1739_STRPN (P67282) UPF0144 protein SP1739 35 0.16
8Y1584_STRR6 (P67283) UPF0144 protein spr1584 35 0.16
9SAP1_SCHPO (P40847) Switch-activating protein 1 35 0.21
10REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonse... 35 0.27
11TIG_OCEIH (Q8CXB7) Trigger factor (TF) 35 0.27
12PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-) 34 0.46
13FAR10_YEAST (Q06001) Factor arrest protein 10 34 0.46
14POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat pr... 34 0.46
15Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 ... 34 0.46
16CING_MOUSE (P59242) Cingulin 33 0.60
17HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR) 33 0.60
18MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protei... 33 0.78
19TIG_STAES (Q8CNY4) Trigger factor (TF) 33 0.78
20TIG_STAEQ (Q5HNM8) Trigger factor (TF) 33 0.78
21GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modi... 33 1.0
22SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like ... 33 1.0
23RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
24DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain pro... 33 1.0
25USO1_YEAST (P25386) Intracellular protein transport protein USO1... 33 1.0
26RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
27RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC ... 33 1.0
28RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase 33 1.0
29DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (... 32 1.3
30GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modi... 32 1.3
31GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modi... 32 1.3
32Y164_METJA (Q57628) Hypothetical protein MJ0164 32 1.3
33DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein) 32 1.3
34POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein V... 32 1.7
35YR445_MIMIV (Q5UQP3) DnaJ-like protein R445 32 1.7
36POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein V... 32 1.7
37RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC ... 32 1.7
38POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein V... 32 1.7
39POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein V... 32 1.7
40POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein V... 32 1.7
41TIG_HELHP (Q7VIN8) Trigger factor (TF) 32 1.7
42TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TR... 32 1.7
43SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2 32 1.7
44POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein V... 32 2.3
45PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal prot... 32 2.3
46POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein V... 32 2.3
47POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein V... 32 2.3
48MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein ... 32 2.3
49CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11 32 2.3
50MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II ... 32 2.3
51FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1) 32 2.3
52YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4 31 3.0
53PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin) 31 3.0
54RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
55RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
56RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC ... 31 3.0
57LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only... 31 3.0
58FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA 31 3.0
59Y124_METJA (Q57588) Hypothetical protein MJ0124 31 3.0
60DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (... 31 3.9
61IF2_AQUAE (O67825) Translation initiation factor IF-2 31 3.9
62CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere prot... 31 3.9
63IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2 31 3.9
64DMD_PIG (Q5GN48) Dystrophin 31 3.9
65KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase ... 31 3.9
66CE290_BOVIN (Q9TU23) Centrosomal protein Cep290 30 5.1
67IOVO_TADRA (P68157) Ovomucoid (Fragment) 30 5.1
68IOVO_SARME (P68156) Ovomucoid (Fragment) 30 5.1
69IOVO_NEOJU (P68155) Ovomucoid (Fragment) 30 5.1
70IOVO_MERCU (P68154) Ovomucoid (Fragment) 30 5.1
71IOVO_LOPSP (P68153) Ovomucoid (Fragment) 30 5.1
72IOVO_DRONO (P05560) Ovomucoid (Fragment) 30 5.1
73IOVO_CYACY (P68152) Ovomucoid (Fragment) 30 5.1
74IOVO_COSCO (P05571) Ovomucoid (Fragment) 30 5.1
75IOVO_CHLPI (P68151) Ovomucoid (Fragment) 30 5.1
76IOVO_ANAPL (P68150) Ovomucoid (Fragment) 30 5.1
77IOVO_ANACA (P68149) Ovomucoid (Fragment) 30 5.1
78IOVO_ALOAE (P68148) Ovomucoid (Fragment) 30 5.1
79IOVO_AIXSP (P68145) Ovomucoid (Fragment) 30 5.1
80IOVO_AIXGA (P68144) Ovomucoid (Fragment) 30 5.1
81BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protei... 30 5.1
82ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14) 30 5.1
83RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase 30 5.1
84DMD_CANFA (O97592) Dystrophin 30 5.1
85RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70) 30 5.1
86IE68_SHV21 (Q01042) Immediate-early protein 30 5.1
87DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain pro... 30 5.1
88TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.... 30 6.6
89SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chon... 30 6.6
90MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A) 30 6.6
91LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (L... 30 6.6
92IOVO_GALCH (P68379) Ovomucoid (Fragment) 30 6.6
93IOVO_FULAT (P68378) Ovomucoid (Fragment) 30 6.6
94ESSB_STAAW (Q7A1V2) Protein essB 30 6.6
95ESSB_STAAU (P0C053) Protein essB 30 6.6
96ESSB_STAAS (Q6GCI6) Protein essB 30 6.6
97ESSB_STAAR (Q6GK25) Protein essB 30 6.6
98ESSB_STAAN (Q7A7S0) Protein essB 30 6.6
99ESSB_STAAM (Q99WU0) Protein essB 30 6.6
100ESSB_STAAC (Q5HJ87) Protein essB 30 6.6
101RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70) 30 6.6
102DMD_HUMAN (P11532) Dystrophin 30 6.6
103ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl trans... 30 6.6
104PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type... 30 6.6
105FRPA_NEIMC (P55126) Iron-regulated protein frpA 30 6.6
106CE290_HUMAN (O15078) Centrosomal protein Cep290 30 6.6
107CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) ... 30 6.6
108KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase ty... 30 6.6
109SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondr... 30 6.6
110DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa... 30 6.6
111FRPC_NEIMC (P55127) Iron-regulated protein frpC 30 6.6
112FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC 30 6.6
113CING_XENLA (Q9PTD7) Cingulin 30 6.6
114TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing ... 30 6.6
115TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondria... 30 6.6
116SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chon... 30 6.6
117SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chon... 30 6.6
118SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chon... 30 6.6
119ENGA_CHRVO (Q7NS92) GTP-binding protein engA 30 6.6
120IOVO_TINMA (P52254) Ovomucoid (Fragment) 30 8.7
121IOVO_CASCA (P62337) Ovomucoid (Fragment) 30 8.7
122IOVO_CASBE (P62336) Ovomucoid (Fragment) 30 8.7
123Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417 30 8.7
124Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/E... 30 8.7
125RNF17_HUMAN (Q9BXT8) RING finger protein 17 30 8.7
126CING_HUMAN (Q9P2M7) Cingulin 30 8.7
127SWC3_YEAST (P31376) SWR1-complex protein 3 30 8.7
128PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN) 30 8.7
129PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediat... 30 8.7
130DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa... 30 8.7 
>RAD50_PYRFU (P58301) DNA double-strand break repair rad50 ATPase|
          Length = 882

 Score = 39.7 bits (91), Expect = 0.008
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELD---QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVL 501
           K  K+ +T+ +  G  ++++LD   +  ++I +R  + + S +E    QR+  +  E + 
Sbjct: 573 KELKELNTKLESFGFKSVEDLDSKLRELEEIYKRYLTLLNSKKELEITQREIAKAKETLE 632

Query: 500 EDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
             FE+  E E +     K L ++K+  N EE K K + + +  +E+A   A  K
Sbjct: 633 MSFEELAEVEADIERIEKKLSQLKQKYNEEEYKKKREEKEELEKELARLEAQKK 686
to top
>MYO6_HUMAN (Q9UM54) Myosin-6 (Myosin VI)|
          Length = 1285

 Score = 37.4 bits (85), Expect = 0.041
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 12/108 (11%)
 Frame = -3

Query: 638  MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 477
            M  +   KE D +    ++++  L  K Q  EE   ++R + EM +   R  ED +   +
Sbjct: 890  MTQEQIQKEYDALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRK 949

Query: 476  EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 351
            EE+   M  +   K K      K + ++E +++A++EAQ  R+  EES
Sbjct: 950  EEEERRMKLEMEAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEES 997
to top
>UPF3_YEAST (P48412) Nonsense-mediated mRNA decay protein 3 (Up-frameshift|
           suppressor 3)
          Length = 387

 Score = 37.0 bits (84), Expect = 0.054
 Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
 Frame = -3

Query: 671 KFTKDADTEFDMIG-----------QNAMKEL---DQIGDQIMERLDSKMQSYEETAEMQ 534
           KFT+ +  +  ++G            N+MK+L   D+   Q    L S  + + ++ E++
Sbjct: 190 KFTQTSKKDAALVGTIEEDEIFKTFMNSMKQLNENDEYSFQDFSVLKSLEKEFSKSIELE 249

Query: 533 RQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG---KVKKPQNNEEIKVKAKIEAQKVREI 363
            +  E  ERVL +     ++ KN+    K+     K K+ + + +I  K +   +K RE 
Sbjct: 250 NKIAERTERVLTELVGTGDKVKNKNKKKKNKNAKKKFKEEEASAKIPKKKRNRGKKKREN 309

Query: 362 AEESAGSKTR 333
            E+S  SKT+
Sbjct: 310 REKSTISKTK 319
to top
>MYO6_MOUSE (Q64331) Myosin-6 (Myosin VI)|
          Length = 1265

 Score = 36.2 bits (82), Expect = 0.092
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
 Frame = -3

Query: 638  MIGQNAMKELDQI---GDQIMERLDSKMQSYEETAEMQRQEIEMNE---RVLEDFEDWIE 477
            M  +   KE D +    + ++  L  K Q  EE   ++R + EM +   R  ED E   +
Sbjct: 893  MTREQIQKEYDALVKSSEDLLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEERRRK 952

Query: 476  EEKNEGMFFKSLGKVK------KPQNNEEIKVKAKIEAQKVREIAEES 351
            EE+   M  +   K K      K + ++E ++++++EAQ  R+  EES
Sbjct: 953  EEEERRMKLEMEPKRKQEEEERKKREDDEKRIQSEVEAQLARQREEES 1000
to top
>TCF8_HUMAN (P37275) Transcription factor 8 (NIL-2-A zinc finger protein)|
            (Negative regulator of IL2)
          Length = 1124

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
 Frame = -3

Query: 629  QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDF--EDWIEEEKNEGM 456
            ++  +E D+  ++  E  D +M+  +E  E ++ + +  E   E+   E+ +EE +NEG 
Sbjct: 1026 ESLTREEDEDSEKEEEEEDKEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEEAENEGE 1085

Query: 455  FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
              K+ G +K    ++  + +A    QKV E +E+ +  KT
Sbjct: 1086 EAKTEGLMK----DDRAESQASSLGQKVGESSEQVSEEKT 1121
to top
>TNNT_CAEEL (Q27371) Troponin T|
          Length = 405

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
 Frame = -3

Query: 572 SKMQSYEETAEMQRQEIEMNERVLEDFEDW--IEEEKNEGMFFKSLGKVKKPQNNEEIKV 399
           +K+  YE+   +++++IE   R L++ ++    E E++E  F +   +  + +  EE + 
Sbjct: 80  AKLLDYEQRRVLEKEQIEQELRELKEKQEKRRAEREEDERQFAERRRQDDERRRKEEDER 139

Query: 398 KAKIEAQKVREIAEE 354
           KAK +A+K+R+  E+
Sbjct: 140 KAKADAEKIRKNEEK 154
to top
>Y1739_STRPN (P67282) UPF0144 protein SP1739|
          Length = 534

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNE 510
           K+ ++ D EF    ++  +EL QI  ++ ER       D  + S E+T E + Q I    
Sbjct: 82  KYREEVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRA 137

Query: 509 RVLEDFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 360
           + L+  E+ +EE E+ +    + +G + + +  + I   A+ E    REIA
Sbjct: 138 KNLDAREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
to top
>Y1584_STRR6 (P67283) UPF0144 protein spr1584|
          Length = 534

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELDQIGDQIMERL------DSKMQSYEETAEMQRQEIEMNE 510
           K+ ++ D EF    ++  +EL QI  ++ ER       D  + S E+T E + Q I    
Sbjct: 82  KYREEVDAEF----KSERQELKQIESRLTERATSLDRKDDNLTSKEQTLEQKEQSISDRA 137

Query: 509 RVLEDFEDWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIA 360
           + L+  E+ +EE E+ +    + +G + + +  + I   A+ E    REIA
Sbjct: 138 KNLDAREEQLEEVERQKEAELERIGALSQAEARDII--LAQTEENLTREIA 186
to top
>SAP1_SCHPO (P40847) Switch-activating protein 1|
          Length = 254

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
 Frame = -3

Query: 614 ELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK 435
           ELDQ+ D+   RL S++Q Y E   + +++ + N+ + E  +   EE++N  M    +  
Sbjct: 111 ELDQLCDEWKARL-SELQQYREKFLVGKRKCDCNDEINERLKKLTEEQQNVDMLVAKVNF 169

Query: 434 VKKP-QNNEE--IKVKAKIE 384
           + K   +NEE  ++V AK++
Sbjct: 170 LSKHLHDNEEKLMQVNAKMD 189
to top
>REN3B_HUMAN (Q9BZI7) Regulator of nonsense transcripts 3B (Nonsense mRNA|
           reducing factor 3B) (Up-frameshift suppressor 3 homolog
           B) (hUpf3B) (hUpf3p-X)
          Length = 483

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 24/100 (24%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-MQRQEIEMNERVLED 495
           K T   +T  + I     + + +    ++  L +K +  EE  E  +R+EIE   +  E+
Sbjct: 173 KMTSTPETLLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEE 232

Query: 494 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 375
              W EEEK +    + L K+ +    +++K + KI+  +
Sbjct: 233 RRKWKEEEKRKRKDIEKLKKIDRIPERDKLKDEPKIKVHR 272
to top
>TIG_OCEIH (Q8CXB7) Trigger factor (TF)|
          Length = 428

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 20/94 (21%), Positives = 47/94 (50%)
 Frame = -3

Query: 635 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 456
           I +   KEL ++ D+  + +D +++S +E  + +R E+E N++        +E +K E +
Sbjct: 239 INEVKAKELPELDDEFAKDVDEEVESLDELKKKKRNELETNKK------QEVENKKREEL 292

Query: 455 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 354
                  ++K  +N E+ +   +   +V ++  E
Sbjct: 293 -------IQKASDNVEVDIPEAMVDTEVNQMVRE 319
to top
>PRIL_METBF (Q46E38) Probable DNA primase large subunit (EC 2.7.7.-)|
          Length = 413

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -3

Query: 596 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 417
           D++ E+++  +  YE+   ++ +E EM +   E  E   +EEK E    +   ++KK + 
Sbjct: 314 DRLCEKINHPLAYYEKKIYLKNKEKEMEKEKEEKEEKEKQEEKKEEEEKEKQEEIKKKKK 373

Query: 416 NEEIKVKA-KIEAQKVREIAEE 354
            E+ + K  KI+  K RE  +E
Sbjct: 374 KEKQEEKGKKIKEGKKRERKQE 395
to top
>FAR10_YEAST (Q06001) Factor arrest protein 10|
          Length = 478

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N    L+     ++E+ D ++   +    ++R+     E+++E   + +++ + + MFFK
Sbjct: 312 NYTTHLEYTNKLLVEKNDQQLVKLQNG--LRRKLSGKYEKIIEQNRNQVKQLERDHMFFK 369

Query: 446 SLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSK 339
              +VKK +NNE+ K ++ +IE  K R   E    S+
Sbjct: 370 KSFEVKKRRNNEKQKSMEREIEDLKTRLEVERYKNSQ 406
to top
>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat protein;|
           Protease (EC 3.4.23.-); Reverse transcriptase (EC
           2.7.7.49); Ribonuclease H (EC 3.1.26.4)]
          Length = 1675

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
 Frame = -3

Query: 668 FTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE 489
           +++  D EF+ +G    ++LDQ   +  E     +  +E   ++  +EI   + V E  E
Sbjct: 374 YSEYEDLEFEKLGLTGWEDLDQDSIETEE-----ITEWENPNQVLHREIRAYKSVSEQIE 428

Query: 488 DWIEE-EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTR 333
           D   E  K  G +  +L  +++  + ++I+     +A+ + EIA+ S  S+ R
Sbjct: 429 DIFGELLKEHGNYDMALKNLEEKYDLDKIE-----KAKSIEEIAKSSTSSEIR 476
to top
>Y1505_METJA (Q58900) Putative ATP-dependent RNA helicase MJ1505 (EC 3.6.1.-)|
          Length = 778

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
 Frame = -3

Query: 572 SKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM-----FFKSLGKVKKPQNNEE 408
           SK +  EET E++ +EIE    V E+ ++  EEEK +       F K + +VK+   +EE
Sbjct: 504 SKEEIKEETEEIKEKEIESKTAVKEETKE--EEEKTKKPVTILDFIKQI-EVKERSKSEE 560

Query: 407 IKVKAKIEAQK--VREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEWRKVA 240
            K+K +I+  K  ++ I +    +  ++    A + +  L + + V +   V  RK A
Sbjct: 561 DKIKQEIKIPKKPIKIIVDVREKNMAKLLHNYANIELKTLEVGDYVLSDRVVVERKTA 618
to top
>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
 Frame = -3

Query: 617  KELDQIGDQ---IMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
            KEL+QIGD     +++L ++M+ Y+E A   R+E+   +R  +D+    E EKN G   +
Sbjct: 844  KELEQIGDDSKLALQQLQAQMEDYKEKA---RKEVADAQRQAKDWAS--EAEKNSGGLSR 898

Query: 446  SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 339
               ++++            +  ++  ++ AQ+++ + +E+   K
Sbjct: 899  LQDELQRLRQALQTSQAERDTARLDKELLAQRLQGLEQEAENKK 942
to top
>HEM1_METMP (Q6M130) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 382

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 25/91 (27%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
 Frame = -3

Query: 659 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAE-----MQRQEIEMN-ERVLE 498
           DA  EF+ I    + +L  I D+ +++   ++ + E+  +     + +Q  ++N E VL+
Sbjct: 256 DAVREFENINLYTIDDLRNISDKNLQKRIEEVPAVEKIIDEEYDVLMKQIEKINVEEVLK 315

Query: 497 DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEI 405
           DF ++IEE + + +  +   K+ K +N EEI
Sbjct: 316 DFNNYIEEIRTKEL--EKAIKLSKTKNPEEI 344
to top
>MPP10_HUMAN (O00566) U3 small nucleolar ribonucleoprotein protein MPP10 (M|
           phase phosphoprotein 10)
          Length = 681

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
 Frame = -3

Query: 662 KDADTEFDMI-----------GQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEM 516
           +D+D +FD+            GQ   +E   + D+  +   S+M++Y E  E + +  + 
Sbjct: 169 EDSDLDFDISKLEQQSKVQNKGQGKPREKSIVDDKFFKL--SEMEAYLENIEKEEERKDD 226

Query: 515 NERVLED---FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 396
           N+   ED   FED I+ +++EG  F S  K+K  +++  +K K
Sbjct: 227 NDEEEEDIDFFED-IDSDEDEGGLFGS-KKLKSGKSSRNLKYK 267
to top
>TIG_STAES (Q8CNY4) Trigger factor (TF)|
          Length = 433

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = -3

Query: 659 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 480
           D  T + + GQN  +  DQ+ D   +R+ + +     TA    + IE+++   ED +   
Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381

Query: 479 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 348
           E EK    F  S+  +K    N +I VK  +  QKV ++  ++A
Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
to top
>TIG_STAEQ (Q5HNM8) Trigger factor (TF)|
          Length = 433

 Score = 33.1 bits (74), Expect = 0.78
 Identities = 29/104 (27%), Positives = 50/104 (48%)
 Frame = -3

Query: 659 DADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWI 480
           D  T + + GQN  +  DQ+ D   +R+ + +     TA    + IE+++   ED +   
Sbjct: 330 DLQTYYQISGQNEEQLRDQMKDDAEQRVKTNLTL---TAIADEENIEVSD---EDIDK-- 381

Query: 479 EEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 348
           E EK    F  S+  +K    N +I VK  +  QKV ++  ++A
Sbjct: 382 ELEKMSEQFNISVEDIKSTLGNTDI-VKNDVRIQKVIDLLRDNA 424
to top
>GIDA_BACC1 (Q72WU4) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/95 (26%), Positives = 45/95 (47%)
 Frame = -3

Query: 635 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 456
           IG + +K+    G +  + L     +YE    +   E+E+++ V E  E  I   K EG 
Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVTEQVEIQI---KYEGY 550

Query: 455 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 351
             KSL +V++ +  E  K+   I+   +  +A E+
Sbjct: 551 IEKSLQQVERMKKMESKKIPVDIDYDAISSLASEA 585
to top
>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein|
           (Chromosome-associated protein E) (hCAP-E) (XCAP-E
           homolog)
          Length = 1197

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 16/118 (13%)
 Frame = -3

Query: 629 QNAMKELDQ-----IGDQIMERLDSKMQSYEETAEMQ------RQEIEMNERVLEDFEDW 483
           Q  M+E++      I  Q +   D+K++S EE  EMQ      ++E+  N++ ++     
Sbjct: 221 QKVMREIEHLSRLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEELSENDKKIKALNHE 280

Query: 482 IEE-----EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 324
           IEE     +K  G+  +SL            K ++  + +K     EES   +   N+
Sbjct: 281 IEELEKRKDKETGVILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNM 338
to top
>RPOC_XYLFA (Q9PA87) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1407

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/53 (24%), Positives = 33/53 (62%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 324
           +E +K EGM F +  ++K+  +N  +++ AK++  ++ EI  +  G +++ ++
Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDRGLRSKASL 568
to top
>DREB_MOUSE (Q9QXS6) Drebrin (Developmentally-regulated brain protein)|
          Length = 705

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 578 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 399
           LD++++  +E  E +RQE E  ER   + E  IEE +            +K Q+ E  + 
Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246

Query: 398 KAKIEAQKV----REIAEESAGSKTRMNI 324
           K +++ Q +    R+  EES   K+   +
Sbjct: 247 KRRLKEQSIFGDQRDEEEESQMKKSESEV 275
to top
>USO1_YEAST (P25386) Intracellular protein transport protein USO1 (Int-1)|
          Length = 1790

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 24/121 (19%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
 Frame = -3

Query: 671  KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSK------MQSYEETAEMQRQEIEMNE 510
            K T++ D +   I ++  ++L+ + +Q+    +SK      ++  EE +  ++ E+E ++
Sbjct: 1446 KITRN-DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSK 1504

Query: 509  RVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRM 330
             +++  E  I  E NE     S+  ++K  ++E+++   K   + ++ +  E +   +R+
Sbjct: 1505 EMMKKLESTI--ESNETELKSSMETIRK--SDEKLEQSKKSAEEDIKNLQHEKSDLISRI 1560

Query: 329  N 327
            N
Sbjct: 1561 N 1561
to top
>RPOC_XANC5 (Q3BWZ0) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/49 (26%), Positives = 31/49 (63%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
           +E +K EGM F +  +VK+  +N  +++ AK++  ++ ++  E+ G ++
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
to top
>RPOC_XANAC (Q8PNS9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1404

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 13/49 (26%), Positives = 31/49 (63%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
           +E +K EGM F +  +VK+  +N  +++ AK++  ++ ++  E+ G ++
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKV-RITQVDVEAGGKRS 564
to top
>RAD50_METMP (P62134) DNA double-strand break repair rad50 ATPase|
          Length = 993

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 25/105 (23%), Positives = 51/105 (48%)
 Frame = -3

Query: 596 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 417
           ++  E+++   +SYEET      E+     +LE+ E  ++ E +E    K    +KK +N
Sbjct: 161 EKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEK-LKNEVSESEILKE-EILKKYEN 218

Query: 416 NEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIAN 282
            E++K++   E  ++ E   E+   K  +   ++ +  + L I N
Sbjct: 219 LEKLKLEKNSEILQMEEKFAENNQLKENLKDIISEIKNINLEIQN 263
to top
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23) (100 kDa U5 snRNP-specific
           protein) (U5-100kD) (PRP28 homolog)
          Length = 820

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEET---------AEMQRQEIE 519
           K  KD D++ D   ++  K+L +     +E L +K ++ EE          AE + + ++
Sbjct: 117 KSRKDRDSKKDEEDEHGDKKL-KAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALK 175

Query: 518 MNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE-----------AQ 378
             ++ +E+ +  +EEE+ +   F+ LG+  ++ PQ  E  + + ++E            Q
Sbjct: 176 RRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQ 235

Query: 377 KVREIAEES 351
           K+RE  ++S
Sbjct: 236 KIREEKDKS 244
to top
>GIDA_BACHK (Q6HAF3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/95 (26%), Positives = 45/95 (47%)
 Frame = -3

Query: 635 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 456
           IG + +K+    G +  + L     +YE    +   E+E+++ V E  E  I   K EG 
Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550

Query: 455 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 351
             KSL +V++ +  E  K+   I+   +  +A E+
Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
to top
>GIDA_BACAN (Q81JH3) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gidA (Glucose-inhibited division protein A)
          Length = 629

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 25/95 (26%), Positives = 45/95 (47%)
 Frame = -3

Query: 635 IGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGM 456
           IG + +K+    G +  + L     +YE    +   E+E+++ V E  E  I   K EG 
Sbjct: 498 IGGSELKD----GIRASDLLRRPEMTYEHIHLLVPSEVELSDEVKEQVEIQI---KYEGY 550

Query: 455 FFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEES 351
             KSL +V++ +  E  K+   I+   +  +A E+
Sbjct: 551 IEKSLQQVERMKKMENKKIPVDIDYDAISSLASEA 585
to top
>Y164_METJA (Q57628) Hypothetical protein MJ0164|
          Length = 395

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
 Frame = -3

Query: 620 MKELDQIGDQIMERLDS--------KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 465
           MK LD+  ++  E+ DS          +  EE + + R+E+     + E  E+WIE    
Sbjct: 239 MKILDENENKSSEKADSLESEGSITTAEEIEEESTVSREELLKKLGIKEPDENWIE---- 294

Query: 464 EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNI 324
                  L  V +P + E  ++K KIE++ V ++      S   +N+
Sbjct: 295 -----TILEDVFRPSDEELEELKEKIESEIVNKVKRMEGVSDVLVNL 336
to top
>DREB_RAT (Q07266) Drebrin (Developmentally-regulated brain protein)|
          Length = 706

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = -3

Query: 578 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 399
           LD++++  +E  E +RQE E  ER   + E  IEE +            +K Q+ E  + 
Sbjct: 199 LDARLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQSLEAEEA 246

Query: 398 KAKIEAQKV----REIAEESAGSKTRMNI 324
           K +++ Q +    R+  EES   K+   +
Sbjct: 247 KRRLKDQSIFGDQRDEEEESQMKKSESEV 275
to top
>POLG_CXA24 (P36290) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2213

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1912 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1971

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1972 KIPVLMEEKLFAFDYTGYDASLSP 1995
to top
>YR445_MIMIV (Q5UQP3) DnaJ-like protein R445|
          Length = 368

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 14/55 (25%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = -3

Query: 536 QRQEIEMNERVLEDFE---DWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEA 381
           ++Q  E N+R++ + +   D+++ +K    F  S+G++K+P N +++  K +++A
Sbjct: 73  EKQRNEYNQRLIVEKQACSDYLKLKKRYNDFADSIGELKEPSNEQKLSFKEQMKA 127
to top
>POLG_POL2L (P06210) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2206

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1965 KIPVLMEEKLFAFDYTGYDASLSP 1988
to top
>RPOC_XYLFT (Q87A33) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1407

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 16/71 (22%), Positives = 39/71 (54%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 303
           +E +K EGM F +  ++K+  +N  +++ AK++  ++ EI  +  G + + +      +I
Sbjct: 517 LENKKGEGMVFANTSELKRAYDNSVVELHAKVKV-RITEIETDDQGLRNKAS------SI 569

Query: 302 LGLTIANAVFA 270
           +  T+  A+ +
Sbjct: 570 VDTTVGRALLS 580
to top
>POLG_POL3L (P03302) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHRNPGVVTGSAVGCDPDLFWS 1963

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
to top
>POLG_POL32 (P06209) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
to top
>POLG_CXA21 (P22055) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2205

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1904 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1963

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1964 KIPVLMEEKLFAFDYTGYDASLSP 1987
to top
>TIG_HELHP (Q7VIN8) Trigger factor (TF)|
          Length = 442

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
 Frame = -3

Query: 617 KELDQIGDQIMERL---DSKMQS----YEETAEM-QRQEI---EMNERVLE--------D 495
           KEL +I D+  + +   +S +QS     +E  EM Q+ EI   E+ E+++E        D
Sbjct: 247 KELPKIDDEFAKSIAGEESNLQSLKDMIKEQLEMEQKTEIYNKELKEKLVEILLKNISFD 306

Query: 494 FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLA 315
             D I E++ + +F  +L ++ KP+  ++IK   + EA+K RE  ++ A    ++   + 
Sbjct: 307 LPDLIVEQEMDILFRNALSQL-KPEEFDKIK-NNQDEAKKQRETHKDEARKSVQITFIMD 364

Query: 314 LMA 306
            +A
Sbjct: 365 ALA 367
to top
>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)|
           (Golgi-associated microtubule-binding protein 210)
           (GMAP-210) (Trip230) (Clonal evolution related gene on
           chromosome 14)
          Length = 1979

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 20/92 (21%), Positives = 43/92 (46%)
 Frame = -3

Query: 629 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 450
           QN  +E+D    ++    ++  Q   E +   R+E+   E  +E+ E+ + ++   G+  
Sbjct: 223 QNRSQEIDDHQHEMSVLQNAHQQKLTEISRRHREELSDYEERIEELENLL-QQGGSGVIE 281

Query: 449 KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 354
             L K+ + Q   ++    K+E+ K  E  E+
Sbjct: 282 TDLSKIYEMQKTIQVLQIEKVESTKKMEQLED 313
to top
>SMI2_DEBHA (Q6BJY4) KNR4/SMI1 homolog 2|
          Length = 590

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
 Frame = -3

Query: 617 KELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLG 438
           K+ D+I ++  E +++  +  ++  E + QE E  +    + E+  E+E+NE    K L 
Sbjct: 495 KQKDEIIEEKPEVIETPAKEDDKEEEEEEQEEEKEQEKEHENEEAPEDEQNEDA--KPLT 552

Query: 437 KVKKPQNNEEIKVKAKIEAQK------VREIAEE 354
           K +K   N+  K K + + QK      V E+AE+
Sbjct: 553 KTQK--KNQSKKAKKQQQKQKQNETNDVEEVAED 584
to top
>POLG_POL2W (P23069) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2204

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1905 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVVTGSAVGCDPDLFWS 1964

Query: 248  KVAAL 234
            K+  L
Sbjct: 1965 KIPVL 1969
to top
>PLEC1_HUMAN (Q15149) Plectin-1 (PLTN) (PCN) (Hemidesmosomal protein 1) (HD1)|
          Length = 4684

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 37/156 (23%), Positives = 66/156 (42%)
 Frame = -3

Query: 647  EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 468
            E ++I   A  E  +   Q++E   +++Q     A  +RQE+E            +  E 
Sbjct: 1849 EQELIRLRAETEQGEQQRQLLEEELARLQREAAAATQKRQELEAELAK-------VRAEM 1901

Query: 467  NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTI 288
               +  K+  + +    +E+ K + + EA + RE+AEE+A  +      LA  A     +
Sbjct: 1902 EVLLASKAKAEEESRSTSEKSKQRLEAEAGRFRELAEEAARLRA-----LAEEAKRQRQL 1956

Query: 287  ANAVFATPEVEWRKVAALGLIFIGLVAQVTYEQDIS 180
            A    A    E  +V A  L  IG   ++  E +I+
Sbjct: 1957 AEEDAARQRAEAERVLAEKLAAIGEATRLKTEAEIA 1992
to top
>POLG_POL1S (P03301) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2208

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
to top
>POLG_POL1M (P03300) Genome polyprotein [Contains: Coat protein VP4 (P1A); Coat|
            protein VP2 (P1B); Coat protein VP3 (P1C); Coat protein
            VP1 (P1D); Picornain 2A (EC 3.4.22.29) (Core protein
            P2A); Core protein P2B; Core protein P2C; Core protein
            P3A; Genome
          Length = 2208

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -3

Query: 413  EEIKVKAKIEAQKVREIAEESAGSKTRM-----NIYLALMAILGLTIANAVFATPEVEWR 249
            +E++ K K+E  K R I   S      M     N+Y A     G+   +AV   P++ W 
Sbjct: 1907 DELRSKTKVEQGKSRLIEASSLNDSVAMRMAFGNLYAAFHKNPGVITGSAVGCDPDLFWS 1966

Query: 248  KVAALGLIFIGLVAQVTYEQDISP 177
            K+  L    +       Y+  +SP
Sbjct: 1967 KIPVLMEEKLFAFDYTGYDASLSP 1990
to top
>MYT1L_HUMAN (Q9UL68) Myelin transcription factor 1-like protein (MyT1L protein)|
           (MyT1-L)
          Length = 1186

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 18/131 (13%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 486
           T+D D + +  G+   ++ D+ GD+  E  +   +  EE  E    + E  E V ++ E+
Sbjct: 96  TEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEE 155

Query: 485 WIEEEKNEG-----------MFFKSLGKVKKPQNN-------EEIKVKAKIEAQKVREIA 360
             EEE+ E               + +   +K  NN       +E+  K+ +   K+ E A
Sbjct: 156 EEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNSDEYDNYDELVAKSLLNLGKIAEDA 215

Query: 359 EESAGSKTRMN 327
              A +++ MN
Sbjct: 216 AYRARTESEMN 226
to top
>CCD11_MOUSE (Q9D439) Coiled-coil domain-containing protein 11|
          Length = 399

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/102 (23%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
 Frame = -3

Query: 629 QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 450
           ++  +E  +  D  M+ +   +Q  ++ A+ ++Q+ E   R  + + D++ + + E    
Sbjct: 182 ESMQREYREDLDLNMKLVGRALQDLQDEADKKKQKREEMGREQKIYNDYLMQRREEE--- 238

Query: 449 KSLGKVKKPQNNEEIK-VKAKIEAQKVREIAEESAGSKTRMN 327
               K ++ + N  ++ +KAK  A+K RE+A + A  K  MN
Sbjct: 239 ----KAQEKELNRLLEDIKAKKLAEKDRELALQRAARKQLMN 276
to top
>MYS2_DICDI (P08799) Myosin-2 heavy chain, non muscle (Myosin II heavy chain, non|
            muscle)
          Length = 2116

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
 Frame = -3

Query: 671  KFTKDA-DTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLED 495
            K+ KD  DT++ +  + A K   +IG   +E    +++S  E  + +  + + +++ LE 
Sbjct: 1815 KYEKDLKDTKYKLNDEAATKTQTEIGAAKLEDQIDELRSKLEQEQAKATQADKSKKTLEG 1874

Query: 494  FEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
              D +  +       +  GK+K     E+  ++ ++E  ++RE  EE+  SK+
Sbjct: 1875 EIDNLRAQ------IEDEGKIKMRLEKEKRALEGELE--ELRETVEEAEDSKS 1919
to top
>FLOT2_CARAU (O42305) Flotillin-2 (Reggie-1) (REG-1)|
          Length = 428

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 26/109 (23%), Positives = 57/109 (52%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 486
           T+ AD++ ++  Q A    +    +   +L  ++++ +E  +++ +EIE+ E V    + 
Sbjct: 210 TRMADSKRELELQKAAFNQEVNTKKAESQLAYELEAAKEQQKIRLEEIEI-EVVQRKKQI 268

Query: 485 WIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
            IEE++ E    + +  VK+P   E  K++   E QK++++    A S+
Sbjct: 269 SIEEKEIERTEKELIATVKRPAEAEAYKMQQLAEGQKLKKVLIAQAESE 317
to top
>YSR4_CAEEL (Q09952) Hypothetical protein F59B10.4|
          Length = 267

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = -3

Query: 332 MNIYLALMAILGLTIANAVFATPEVEWRKVAALGLIFIGLVAQVTYE 192
           +N  L L+A+LG+    +    P + W+ V  L L+F+G ++   Y+
Sbjct: 76  VNFSLVLLALLGINSKVSSMILPALVWKCVLLLFLLFLGCISVDAYQ 122
to top
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)|
          Length = 3336

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 4/118 (3%)
 Frame = -3

Query: 593  QIMERLDSKMQSYEETAEMQRQEIEMN----ERVLEDFEDWIEEEKNEGMFFKSLGKVKK 426
            Q +E L  ++Q  EE AE+Q  E+E N    E  +ED    I+E       F++  K K+
Sbjct: 1815 QALEALQQRLQGAEEAAELQLAELERNVALREAEVEDMASRIQE-------FEAALKAKE 1867

Query: 425  PQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLTIANAVFATPEVEW 252
                E      +I+A   R+ A  +      + +     A+    +A A  A PE++W
Sbjct: 1868 ATIAER---NLEIDALNQRKAAHSAELEAVLLALARIRRALEQQPLA-AGAAPPELQW 1921
to top
>RPOC_XANOR (Q8KTH8) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDAVDGKRT 565
to top
>RPOC_XANCP (Q8PC55) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
to top
>RPOC_XANC8 (Q4URD3) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP|
           beta' subunit) (Transcriptase beta' chain) (RNA
           polymerase beta' subunit)
          Length = 1405

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 13/49 (26%), Positives = 28/49 (57%)
 Frame = -3

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKT 336
           +E +K EGM F +  +VK+  +N  +++ AK++ +  +   +   G +T
Sbjct: 517 LENKKGEGMVFANTSEVKRAYDNRVVELHAKVKVRITQVDVDTVDGKRT 565
to top
>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -3

Query: 617  KELDQIGDQIMERLDSKMQSYEETAEMQRQEI--EMNERV-LEDFEDWIEE 474
            K LDQIG+    +  SK +     AE++RQ+I  EM +R  L +   WI +
Sbjct: 1439 KYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQ 1489
to top
>FRPA_NEIMB (Q9K0K9) Iron-regulated protein frpA|
          Length = 1302

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 495
           TK AD  F   G  A+ ELD  GD I+   D+  QS     ++ +  I + NE R LE+
Sbjct: 353 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQDGISQANELRTLEE 411
to top
>Y124_METJA (Q57588) Hypothetical protein MJ0124|
          Length = 1075

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 16/85 (18%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -3

Query: 608  DQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGMFFKSL 441
            + IG + ++R  +      + + + +Q   + + +LE  E    DWI +  ++ ++  ++
Sbjct: 895  ENIGKREIKRAVANYYFILKNSILDKQHDPIYKEILERLERLRRDWIMKRIDDKIYLNAI 954

Query: 440  GKVKKPQNNEEIKVKAKIEAQKVRE 366
              + + +NN + K+K K   ++++E
Sbjct: 955  KNLMELKNNYDKKIKGKSSIERIKE 979
to top
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)|
           (DEAD box protein 23)
          Length = 820

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 29/136 (21%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNAMKELDQIGDQ-------IMERLDSKMQSYEET---------AE 540
           K  KD D++ D        E D+ GD+        +E L +K ++ EE          AE
Sbjct: 117 KSRKDRDSKKD--------EEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAE 168

Query: 539 MQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGK--VKKPQNNEEIKVKAKIE------ 384
            + + ++  ++ +E+ +  +EEE+ +   F+ LG+  ++ PQ  E  + + ++E      
Sbjct: 169 REAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGN 228

Query: 383 -----AQKVREIAEES 351
                 QK+RE  ++S
Sbjct: 229 EDEEGRQKIREEKDKS 244
to top
>IF2_AQUAE (O67825) Translation initiation factor IF-2|
          Length = 805

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNER---VLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 417
           +++ + K +  EE  E ++ +I+M+++   ++   E  +E+EK +    +   + +K + 
Sbjct: 162 VKKEERKEEKKEEKKEEEKPKIKMSKKEREIMRKLEHAVEKEKKK----QEKREKEKKKK 217

Query: 416 NEEIKVKAKIEAQKVREIAE 357
            EE+K+    E   VRE+AE
Sbjct: 218 EEEVKIIYIPEVITVRELAE 237



 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/88 (21%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
 Frame = -3

Query: 596 DQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQN 417
           +++++ +  K +  +E  +++++  E   RV+E  ++  +EEK E    +   K+K  + 
Sbjct: 129 EELIKEILEKKEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEEKPKIKMSKK 188

Query: 416 NEEI--KVKAKIEAQKVREIAEESAGSK 339
             EI  K++  +E +K ++   E    K
Sbjct: 189 EREIMRKLEHAVEKEKKKQEKREKEKKK 216
to top
>CENPF_HUMAN (P49454) CENP-F kinetochore protein (Centromere protein F) (Mitosin)|
            (AH antigen)
          Length = 3210

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/92 (21%), Positives = 41/92 (44%)
 Frame = -3

Query: 629  QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 450
            Q  + ELD++       L+ K Q+  +  E  +  +EM +  L++  + +     +    
Sbjct: 2319 QGQLSELDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAALCGDQEIM 2378

Query: 449  KSLGKVKKPQNNEEIKVKAKIEAQKVREIAEE 354
            K+  +   P   EE +++  IE  + R  A+E
Sbjct: 2379 KATEQSLDPPIEEEHQLRNSIEKLRARLEADE 2410
to top
>IF2_PSEHT (Q3IJ53) Translation initiation factor IF-2|
          Length = 886

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -3

Query: 581 RLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK 402
           RL+ + ++ +E AE++ ++ E   +  ED +   +EE       +   K K+    +  K
Sbjct: 118 RLEEQQKAAQEAAELKAKQ-EAERKAKEDADRKAKEEAKRKADAERKAKQKQMTPEQSAK 176

Query: 401 V-KAKIEAQKVREIAEESAGSK 339
             K +IEA+++++ AEE+A  K
Sbjct: 177 SEKDRIEAERLQKEAEEAALKK 198
to top
>DMD_PIG (Q5GN48) Dystrophin|
          Length = 3674

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
 Frame = -3

Query: 662  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 513
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1804 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1863

Query: 512  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-------PQNNEEIK------VKAKIEAQ 378
              ++ LE    W + ++      K L  ++K       PQ+ ++IK       K K E  
Sbjct: 1864 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPQDEKKIKEIDRELQKKKEELD 1923

Query: 377  KVREIAE 357
             VR  AE
Sbjct: 1924 AVRRQAE 1930
to top
>KCC4_MOUSE (P08414) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV)
          Length = 469

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDS----KMQSYEETAEMQRQEIEMNERVLE 498
           T+DA    D++G+  M+E DQ  DQ+     +    K+QS E   +   +E E +  V +
Sbjct: 358 TQDAKDSTDLLGKK-MQEEDQEEDQVEAEASADEMRKLQSEEVEKDAGVKEEETSSMVPQ 416

Query: 497 DFEDWIEEEKNE 462
           D ED +E +  E
Sbjct: 417 DPEDELETDDPE 428
to top
>CE290_BOVIN (Q9TU23) Centrosomal protein Cep290|
          Length = 1453

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           +E L+ +  S +E  E   +E+E+ +  L   E   E+E   G    ++ K KK   N E
Sbjct: 72  LEHLECENVSLKEQMESINKELEITKEKLHTIEQAWEQETKLGN-ESNMDKAKKSVTNSE 130

Query: 407 I-KVKAKIEAQKVREIAE 357
           I  +  KI   +++E+ E
Sbjct: 131 IVSISKKITMLEMKELNE 148
to top
>IOVO_TADRA (P68157) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_SARME (P68156) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_NEOJU (P68155) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_MERCU (P68154) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_LOPSP (P68153) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_DRONO (P05560) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 330 EYLPCTHGDTRSYNRKCRLCN 268
           EY+P    D+++YN KC  CN
Sbjct: 17  EYMPLCGSDSKTYNNKCDFCN 37
to top
>IOVO_CYACY (P68152) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_COSCO (P05571) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_CHLPI (P68151) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_ANAPL (P68150) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_ANACA (P68149) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_ALOAE (P68148) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_AIXSP (P68145) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>IOVO_AIXGA (P68144) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY+P    D ++Y  KC  CN
Sbjct: 5   DCSGYPKPACTMEYMPLCGSDNKTYGNKCNFCN 37
to top
>BFSP1_HUMAN (Q12934) Filensin (Beaded filament structural protein 1) (Lens|
           fiber cell beaded-filament structural protein CP 115)
           (CP115) (Lens intermediate filament-like heavy) (LIFL-H)
          Length = 665

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = -3

Query: 611 LDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 498
           L+Q      E  D ++Q Y E  E  R+EIE  ERVLE
Sbjct: 249 LEQAIKSAHECYDDEIQLYNEQIETLRKEIEETERVLE 286
to top
>ATPF_CLOAB (O05098) ATP synthase B chain (EC 3.6.3.14)|
          Length = 159

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/71 (30%), Positives = 33/71 (46%)
 Frame = -3

Query: 569 KMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAK 390
           K  +  E A + + E E N          +E+ K +G       KVK  + +EEI  +AK
Sbjct: 47  KADAQNEEARLLKVESEKN----------LEDSKLQGKTIVENYKVKAEKVSEEITAEAK 96

Query: 389 IEAQKVREIAE 357
            EAQ + E A+
Sbjct: 97  TEAQNILERAK 107
to top
>RAD50_METMA (Q8PUY4) DNA double-strand break repair rad50 ATPase|
          Length = 1070

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -3

Query: 623 AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFE----DWIEEEKNEGM 456
           A+KE +  GD  +  LDS+MQS        + EIE  E+ + D      D+ E++     
Sbjct: 438 ALKEKES-GDASLRELDSEMQSCRVAVSKGKSEIEALEKEIRDNSKAVLDFQEQKSEVFA 496

Query: 455 FFKSLGKVKKPQNNEE 408
             K+LG  ++   N E
Sbjct: 497 GLKALGFTEEQLENLE 512
to top
>DMD_CANFA (O97592) Dystrophin|
          Length = 3680

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
 Frame = -3

Query: 662  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 513
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1810 KEEDFNKDMSEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1869

Query: 512  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 366
              ++ LE    W + ++      K L  ++K     P+  +E K+K    E QK +E
Sbjct: 1870 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1926
to top
>RPOD_HELPJ (Q9ZMY3) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 681

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 16/63 (25%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = -3

Query: 569 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 396
           K+++ EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 133 KIKNTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 192

Query: 395 AKI 387
            +I
Sbjct: 193 KQI 195
to top
>IE68_SHV21 (Q01042) Immediate-early protein|
          Length = 407

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 554 EETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 375
           EE  E + +E E  E   E+ E+  EEE+ E    +     ++    EE +   + EA++
Sbjct: 94  EEAEEEEAEEKEAEEEEAEEAEEEAEEEEAEEAEAEEEEAEEEEAEEEEAEEAEEEEAEE 153

Query: 374 VREIAEE 354
             E AEE
Sbjct: 154 AEEEAEE 160
to top
>DREB_HUMAN (Q16643) Drebrin (Developmentally-regulated brain protein)|
          Length = 648

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 578 LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKV 399
           LD +++  +E  E +RQE E  ER   + E  IEE +            +K Q  E  + 
Sbjct: 199 LDERLRFEQERMEQERQEQEERERRYREREQQIEEHR------------RKQQTLEAEEA 246

Query: 398 KAKIEAQKV----REIAEESAGSKTRMNI 324
           K +++ Q +    R+  EE+   K+   +
Sbjct: 247 KRRLKEQSIFGDHRDEEEETHMKKSESEV 275
to top
>TCMO_SOYBN (Q42797) Trans-cinnamate 4-monooxygenase (EC 1.14.13.11) (Cinnamic|
           acid 4-hydroxylase) (CA4H) (C4H) (P450C4H) (Cytochrome
           P450 73)
          Length = 506

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -3

Query: 521 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIK--VKAKIEAQKVREIAEES 351
           E+ E  L+ F+D+  +E+      K LG  K   NN E+K  +   ++AQ+  EI E++
Sbjct: 244 EVKETRLKLFKDYFVDER------KKLGSTKSTNNNNELKCAIDHILDAQRKGEINEDN 296
to top
>SMC3_BOVIN (O97594) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6)
          Length = 1218

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 407 IKVKAKIEAQKVREIAEESAGS 342
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
to top
>MYO3_CAEEL (P12844) Myosin-3 (Myosin heavy chain A) (MHC A)|
          Length = 1969

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
 Frame = -3

Query: 620  MKELDQIGDQIMERL----DSKMQSYEETAEMQRQ--------EIEMNERVLEDFEDWIE 477
            + +L+ + D+I+ R+     S+++SY   AE++R+         ++ N R       W  
Sbjct: 783  LAKLEDLRDEILSRIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTW-- 840

Query: 476  EEKNEGMFFKSLGKVK---KPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMA 306
                   +FK  GKVK   K    +E   +  ++ QK+ E  +    +++++   +A + 
Sbjct: 841  ------EWFKLFGKVKPMLKAGKEQEAMGELAVKIQKLEEAVQRGEIARSQLESQVADL- 893

Query: 305  ILGLTIANAVFATPEVEWRKVA 240
               +   NA+F + E E   +A
Sbjct: 894  ---VEEKNALFLSLETEKANLA 912
to top
>LEA29_GOSHI (P13940) Late embryogenesis abundant protein D-29 (LEA D-29)|
          Length = 302

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFED 486
           T++A  E     Q A  EL    D     + S  Q  ++ A    +E +      E + +
Sbjct: 43  TEEATDEHHSRTQQAKDELKSKADHAANEVKSNTQQAKDRASEVGKEAK---EYTESWTE 99

Query: 485 WIEEEKNEGMFFKS----LGKVKKPQNN-EEIKVKAKIEAQKVREIAEESAGSKTR 333
           W +E+ +EG+ FK      G V+K  ++  +   K K + Q +   A E +  K +
Sbjct: 100 WAKEKISEGLGFKQDDDPKGSVEKAFDSVADTATKTKDKLQDMASGAGEYSAGKAK 155
to top
>IOVO_GALCH (P68379) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      S EY+P    D ++Y+ KC  CN
Sbjct: 5   DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
to top
>IOVO_FULAT (P68378) Ovomucoid (Fragment)|
          Length = 54

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      S EY+P    D ++Y+ KC  CN
Sbjct: 5   DCSGYPQPACSLEYVPFCGSDNKTYSNKCDFCN 37
to top
>ESSB_STAAW (Q7A1V2) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAU (P0C053) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAS (Q6GCI6) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAR (Q6GK25) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAN (Q7A7S0) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAM (Q99WU0) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>ESSB_STAAC (Q5HJ87) Protein essB|
          Length = 444

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 25/96 (26%), Positives = 46/96 (47%)
 Frame = -3

Query: 626 NAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
           N + E+   GD   ++   + + Y +    + Q+I   E+ ++D +   EEEK +     
Sbjct: 360 NKLNEIKNNGDLSNDKRSEETKKYND----KLQDILDKEKQVKDEKAKSEEEKAKA---- 411

Query: 446 SLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSK 339
              K +K +  EE + K K +AQK +E  +E+   K
Sbjct: 412 ---KDEKLKQQEENEKKQKEQAQKDKEKRQEAERKK 444
to top
>RPOD_HELPY (P55993) RNA polymerase sigma factor rpoD (Sigma-70)|
          Length = 671

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = -3

Query: 569 KMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 396
           K++  EE  ++  +E+E     L+  DF +W   +    M+ + +G +K    +EEI++ 
Sbjct: 123 KIKKTEEKQKVLDEELEDGYDFLKEKDFLEWSRSDSPVRMYLREMGDIKLLSKDEEIELS 182

Query: 395 AKI 387
            +I
Sbjct: 183 KQI 185
to top
>DMD_HUMAN (P11532) Dystrophin|
          Length = 3685

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 18/117 (15%)
 Frame = -3

Query: 662  KDADTEFDMIGQN--AMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMN-------- 513
            K+ D   DM   N   +KEL Q GD + +R+  + +  E   + Q  + + N        
Sbjct: 1808 KEEDFNKDMNEDNEGTVKELLQRGDNLQQRITDERKREEIKIKQQLLQTKHNALKDLRSQ 1867

Query: 512  --ERVLEDFEDWIEEEKNEGMFFKSLGKVKK-----PQNNEEIKVK-AKIEAQKVRE 366
              ++ LE    W + ++      K L  ++K     P+  +E K+K    E QK +E
Sbjct: 1868 RRKKALEISHQWYQYKRQADDLLKCLDDIEKKLASLPEPRDERKIKEIDRELQKKKE 1924
to top
>ACCA_MANSM (Q65UI5) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 321

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 671 KFTKDADTEFDMIGQNA--MKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE 498
           K  + A T  +++G  A  +KEL+ I + + E L    + Y+E A+  +Q      R+L 
Sbjct: 241 KSAEKASTAAEVMGLTASRLKELELIDNIVTEPLGGAHRQYDEMAQALKQ------RILS 294

Query: 497 DFED 486
           D ED
Sbjct: 295 DLED 298
to top
>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = -2

Query: 426  TSKQ*GNQGEGQDRSTEGQRDCRGECGVKNSDEYLPCTHGDTRSYNRKC-RLCNTRGGME 250
            TS + G  G  + +  +    C+ +C    +D+ L C H DT  Y+  C + C  R   E
Sbjct: 860  TSCEDGEYGTEEGKCEDCNIICK-KCNGSQADQCLEC-HHDTNLYDTTCVQYCGNRRYPE 917

Query: 249  EGCCSGSNFHWPGCSG 202
             G C   +    GC G
Sbjct: 918  NGECHPCHPSCLGCIG 933
to top
>FRPA_NEIMC (P55126) Iron-regulated protein frpA|
          Length = 1115

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 495
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 366 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 424
to top
>CE290_HUMAN (O15078) Centrosomal protein Cep290|
          Length = 1539

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           +E L+ +  S +E  E   +E+E+ +  L   E   E+E   G    S+ K KK   N +
Sbjct: 53  LEHLECENISLKEQVESINKELEITKEKLHTIEQAWEQETKLGN-ESSMDKAKKSITNSD 111

Query: 407 I-KVKAKIEAQKVREIAE 357
           I  +  KI   +++E+ E
Sbjct: 112 IVSISKKITMLEMKELNE 129
to top
>CASP8_MOUSE (O89110) Caspase-8 precursor (EC 3.4.22.-) (CASP-8) [Contains:|
           Caspase-8 subunit p18; Caspase-8 subunit p10]
          Length = 480

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -3

Query: 638 MIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERV 504
           M+ +N ++ L  I DQ+ + L  K++ YE ++  +R  +E  E +
Sbjct: 151 MLAENNLETLKSICDQVNKSLLGKIEDYERSSTERRMSLEGREEL 195
to top
>KCC4_RAT (P13234) Calcium/calmodulin-dependent protein kinase type IV (EC|
           2.7.11.17) (CAM kinase-GR) (CaMK IV) (Calspermin)
          Length = 474

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
 Frame = -3

Query: 605 QIGDQIMERLDSKMQS---------YEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMF 453
           Q G    + L++KMQ+          +ET ++Q +E+E  E V E+ E+  EEE+   M 
Sbjct: 359 QDGKDKTDPLENKMQAGDHEAAKAAADETMKLQSEEVEEEEGVKEEEEEEEEEEETSRMV 418

Query: 452 FKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 342
                    PQ  E+   + + + Q+++  +EE+  S
Sbjct: 419 ---------PQEPED---RLETDDQEMKRNSEETLKS 443
to top
>SMC3_RAT (P97690) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome segregation protein
           SmcD) (Bamacan) (Basement membrane-associated
           chondroitin proteoglycan)
          Length = 1191

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 407 IKVKAKIEAQKVREIAEESAGS 342
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
to top
>DOCK1_MOUSE (Q8BUR4) Dedicator of cytokinesis protein 1 (180 kDa protein|
           downstream of CRK) (DOCK180) (Fragments)
          Length = 1027

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 20/75 (26%), Positives = 38/75 (50%)
 Frame = -3

Query: 644 FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 465
           F    Q  +KE  Q+  +I+   D K + +EE   + ++  E  E  + D+E   E  K 
Sbjct: 426 FQATTQGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYETEMFDYEQLSELLKK 482

Query: 464 EGMFFKSLGKVKKPQ 420
           +  F++++ KV +P+
Sbjct: 483 QAQFYENIVKVIRPK 497
to top
>FRPC_NEIMC (P55127) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 495
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
to top
>FRPC_NEIMB (Q9JYV5) Iron-regulated protein frpC|
          Length = 1829

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 665 TKDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEI-EMNE-RVLED 495
           TK AD  F   G  A+ ELD  GD I+   D+  Q+     ++ +  I + NE R LE+
Sbjct: 480 TKLADGSFAKHGYAALAELDSNGDNIINAADAAFQTLRVWQDLNQDGISQANELRTLEE 538
to top
>CING_XENLA (Q9PTD7) Cingulin|
          Length = 1360

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = -3

Query: 605 QIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLE--DFEDWIEEEKNEGMFFKSLGKV 432
           Q+ D++ +R+  +       A MQR EIE+ E   E    ++  E++KNE +   S   +
Sbjct: 451 QLDDEMKQRMKLETSQGRPKAGMQRLEIELEESKEECSRLKELYEKKKNE-LSAMSQELM 509

Query: 431 KKPQNNEEIKVKAKIEAQKVREIAEE 354
           +     E+++ K +    K+ +  EE
Sbjct: 510 EVRMGKEQVETKLRTMEDKLMDSKEE 535
to top
>TACC3_HUMAN (Q9Y6A5) Transforming acidic coiled-coil-containing protein 3|
            (ERIC-1)
          Length = 838

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
 Frame = -3

Query: 629  QNAMKELDQIGDQI--MER----LDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 468
            Q  +KE DQ+   +  ME+    L  + +  +E  E  R+  E  ++ +ED+   I +E 
Sbjct: 702  QKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVEDYLARITQEG 761

Query: 467  NEGMFFKSLGKVKKPQNNEEI-KVKAKIEAQKVREIAEESAGSKTRMNI 324
                  K+  + K    NEEI +V++K +A+    +A +++  K +M I
Sbjct: 762  QRYQALKAHAEEKLQLANEEIAQVRSKAQAE---ALALQASLRKEQMRI 807
to top
>TOP2M_CAEEL (P34534) Putative DNA topoisomerase II, mitochondrial precursor (EC|
            5.99.1.3)
          Length = 1053

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 28/118 (23%), Positives = 54/118 (45%)
 Frame = -3

Query: 644  FDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKN 465
            FD  G+  +KE   I +   E  + +   YE+  ++Q++E E     +E+  ++IE   N
Sbjct: 898  FDRNGE--LKEFGNISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTN 955

Query: 464  EGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAILGLT 291
              +  +S+G+        +++ K +    +V  +A  +  SK     YL  M +  LT
Sbjct: 956  GTIEIRSMGR-------NQLEEKLQEMGFRVDPMATIAKNSKKANYGYLLEMPVSRLT 1006
to top
>SMC3_PONPY (Q5R4K5) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 407 IKVKAKIEAQKVREIAEESAGS 342
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
to top
>SMC3_MOUSE (Q9CW03) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome segregation protein
           SmcD) (Bamacan) (Basement membrane-associated
           chondroitin proteoglycan) (Mad member-interacting
           protein 1)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 407 IKVKAKIEAQKVREIAEESAGS 342
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
to top
>SMC3_HUMAN (Q9UQE7) Structural maintenance of chromosome 3 (Chondroitin|
           sulfate proteoglycan 6) (Chromosome-associated
           polypeptide) (hCAP) (Bamacan) (Basement
           membrane-associated chondroitin proteoglycan)
          Length = 1217

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = -3

Query: 587 MERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEE 408
           ++ L +K ++  E +   R   +     +ED E  + E K +    K   +    +  E+
Sbjct: 239 LDELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQ 298

Query: 407 IKVKAKIEAQKVREIAEESAGS 342
           IK + K+E  K +++ +E AG+
Sbjct: 299 IKQRTKLEL-KAKDLQDELAGN 319
to top
>ENGA_CHRVO (Q7NS92) GTP-binding protein engA|
          Length = 469

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 24/68 (35%), Positives = 37/68 (54%)
 Frame = -3

Query: 521 EMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGS 342
           E+ E VLE F D +EEE +    F  +G   +P   +   V A +  ++V  IA + AG+
Sbjct: 154 ELMELVLEGFPDEVEEEDSRHPKFAVIG---RPNVGKSTLVNAILGEERV--IAFDQAGT 208

Query: 341 KTRMNIYL 318
            TR +IY+
Sbjct: 209 -TRDSIYI 215
to top
>IOVO_TINMA (P52254) Ovomucoid (Fragment)|
          Length = 51

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 366 DCRGECGVKNSDEYLPCTHGDTRSYNRKCRLCN 268
           DC G      + EY P    D ++Y+ KC  CN
Sbjct: 4   DCSGYPKPACTAEYFPLCGSDNQTYSNKCAFCN 36
to top
>IOVO_CASCA (P62337) Ovomucoid (Fragment)|
          Length = 54

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 336 SDEYLPCTHGDTRSYNRKCRLCN 268
           S EY+P    D+++YN KC  C+
Sbjct: 15  SPEYMPLCGSDSKTYNNKCDFCS 37
to top
>IOVO_CASBE (P62336) Ovomucoid (Fragment)|
          Length = 54

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 336 SDEYLPCTHGDTRSYNRKCRLCN 268
           S EY+P    D+++YN KC  C+
Sbjct: 15  SPEYMPLCGSDSKTYNNKCDFCS 37
to top
>Y4417_BACTN (Q89ZG0) UPF0144 protein BT_4417|
          Length = 511

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 32/128 (25%), Positives = 56/128 (43%)
 Frame = -3

Query: 662 KDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDW 483
           KDA+TE ++I +N + E       + E+  +K    E+   ++ Q+I+  E  L+   + 
Sbjct: 36  KDAETEAEVIKKNKLLE-------VKEKFLNKKADLEKEVALRNQKIQQAENKLKQ-REM 87

Query: 482 IEEEKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESAGSKTRMNIYLALMAI 303
           +  ++ E +  K L         E   VK  +EAQ V    ++    K +      L AI
Sbjct: 88  VLSQRQEEIQRKKL---------EAEAVKENLEAQLVIVDKKKEELDKLQHQEIEKLEAI 138

Query: 302 LGLTIANA 279
            GL+   A
Sbjct: 139 SGLSADEA 146
to top
>Y111_ENCCU (Q8STB5) Hypothetical protein ECU01_0110/ECU01_1500/ECU08_0040|
          Length = 592

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = -3

Query: 617 KELDQIGDQIMERLDSKMQSY-----EETAEMQRQEIEMNERVLEDFED 486
           +++ + G+ ++  +DSKM+S      EE  E  R ++  +++ +E F D
Sbjct: 147 RQMARYGESLIREIDSKMESMPSEMSEEEKEKMRSDLNDDKKYVESFRD 195
to top
>RNF17_HUMAN (Q9BXT8) RING finger protein 17|
          Length = 653

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
 Frame = -3

Query: 662 KDADTEFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETA-------EMQRQEIEMNERV 504
           + A T+  ++  +A+       ++I E L++   S+E+ +        MQ+Q IE  ERV
Sbjct: 127 RSASTDKTLLNSSAVMLDTNTAEEIDEALNTAHHSFEQLSIAGKALEHMQKQTIEERERV 186

Query: 503 LEDFEDWIEE-----EKNEGMFFKSLGKVKKPQNNEEIKVKAKIEAQK 375
           +E  E   ++     +  +    +   +      +  IK K+ IE +K
Sbjct: 187 IEVVEKQFDQLLAFFDSRKKNLCEEFARTTDDYLSNLIKAKSYIEEKK 234
to top
>CING_HUMAN (Q9P2M7) Cingulin|
          Length = 1197

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/104 (21%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
 Frame = -3

Query: 617  KELDQIGD---QIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFK 447
            KEL++IG+   Q +++L ++++ Y+E A   R+E+   +R  +D+    E EK  G   +
Sbjct: 850  KELEKIGEDSKQALQQLQAQLEDYKEKA---RREVADAQRQAKDWAS--EAEKTSGGLSR 904

Query: 446  SLGKVKK--------PQNNEEIKVKAKIEAQKVREIAEESAGSK 339
               ++++            +  ++  ++ AQ+++ + +E+   K
Sbjct: 905  LQDEIQRLRQALQASQAERDTARLDKELLAQRLQGLEQEAENKK 948
to top
>SWC3_YEAST (P31376) SWR1-complex protein 3|
          Length = 625

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/69 (23%), Positives = 35/69 (50%)
 Frame = -3

Query: 575 DSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFFKSLGKVKKPQNNEEIKVK 396
           D   Q +++  E++++E E+  +   + +    EE+      K + K +K Q  +E K K
Sbjct: 177 DKIEQKWQDEQELKKKEKELKRKNDAEAKRLRMEERKRQQMQKKIAKEQKLQLQKENKAK 236

Query: 395 AKIEAQKVR 369
            K+E + ++
Sbjct: 237 QKLEQEALK 245
to top
>PLEC1_RAT (P30427) Plectin-1 (PLTN) (PCN)|
          Length = 4687

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/100 (24%), Positives = 46/100 (46%)
 Frame = -3

Query: 647  EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 468
            E ++I   A  E  +   Q++E   +++Q     A  +RQE+E            +  E 
Sbjct: 1852 EQELIRLRAETEQGEHQRQLLEEELARLQHEATAATQKRQELEAELAK-------VRAEM 1904

Query: 467  NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 348
               +  K+  + +    +E+ K + + EA + RE+AEE+A
Sbjct: 1905 EVLLASKARAEEESRSTSEKSKQRLEAEAGRFRELAEEAA 1944
to top
>PLEC1_CRIGR (Q9JI55) Plectin-1 (PLTN) (PCN) (300-kDa intermediate|
            filament-associated protein) (IFAP300) (Fragment)
          Length = 4473

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 24/100 (24%), Positives = 46/100 (46%)
 Frame = -3

Query: 647  EFDMIGQNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEK 468
            E ++I   A  E  +   Q++E   +++Q     A  +RQE+E            +  E 
Sbjct: 1638 EQELIRLRAETEQGEQQRQLLEEELARLQREATAATHKRQELEAELAK-------VRAEM 1690

Query: 467  NEGMFFKSLGKVKKPQNNEEIKVKAKIEAQKVREIAEESA 348
               +  K+  + +    +E+ K + + EA + RE+AEE+A
Sbjct: 1691 EVLLASKARAEEESRSTSEKSKQRLEAEADRFRELAEEAA 1730
to top
>DOCK1_HUMAN (Q14185) Dedicator of cytokinesis protein 1 (180 kDa protein|
            downstream of CRK) (DOCK180)
          Length = 1865

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/70 (27%), Positives = 37/70 (52%)
 Frame = -3

Query: 629  QNAMKELDQIGDQIMERLDSKMQSYEETAEMQRQEIEMNERVLEDFEDWIEEEKNEGMFF 450
            Q  +KE  Q+  +I+   D K + +EE   + ++  E  E  + D+E   E  K +  F+
Sbjct: 1269 QGQLKE--QLYQEIIHYFD-KGKMWEEAIALGKELAEQYENEMFDYEQLSELLKKQAQFY 1325

Query: 449  KSLGKVKKPQ 420
            +++ KV +P+
Sbjct: 1326 ENIVKVIRPK 1335


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,203,687
Number of Sequences: 219361
Number of extensions: 1758199
Number of successful extensions: 7025
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 6591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7007
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6541540170
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top