Clone Name	rbasd1n19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK066993.1| Oryza sativa (japonica cultivar-group) cDNA clon...	371	2e-99
2	gb|AY111755.1| Zea mays CL20312_1 mRNA sequence	355	1e-94
3	gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence	349	6e-93
4	dbj|AK120481.1| Oryza sativa (japonica cultivar-group) cDNA clon...	333	4e-88
5	gb|AY103864.1| Zea mays PCO154745 mRNA sequence	323	4e-85
6	ref|NM_196743.1| Oryza sativa (japonica cultivar-group) putative...	258	2e-65
7	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	186	5e-44
8	gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch...	186	5e-44
9	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	186	5e-44
10	ref|NM_105055.2| Arabidopsis thaliana ubiquitin conjugating enzy...	131	3e-27
11	ref|NM_130166.2| Arabidopsis thaliana UBC6 (UBIQUITIN-CONJUGATIN...	131	3e-27
12	gb|AY114061.1| Arabidopsis thaliana putative E2, ubiquitin-conju...	131	3e-27
13	gb|AY074347.1| Arabidopsis thaliana putative E2, ubiquitin-conju...	131	3e-27
14	emb|BX819316.1|CNS0A9TY Arabidopsis thaliana Full-length cDNA Co...	131	3e-27
15	gb|BT005208.1| Arabidopsis thaliana At2g46030 mRNA, complete cds	131	3e-27
16	gb|DQ027021.1| Arabidopsis thaliana ubiquitinating enzyme (At2g4...	131	3e-27
17	gb|DQ027020.1| Arabidopsis thaliana ubiquitinating enzyme (At1g6...	131	3e-27
18	ref|NM_123499.3| Arabidopsis thaliana UBC4 (UBIQUITIN CONJUGATIN...	127	4e-26
19	gb|AY096587.1| Arabidopsis thaliana putative ubiquitin-conjugati...	127	4e-26
20	gb|AY065360.1| Arabidopsis thaliana putative E2, ubiquitin-conju...	127	4e-26
21	gb|DQ027019.1| Arabidopsis thaliana ubiquitinating enzyme (At5g4...	127	4e-26
22	emb|BX821930.1|CNS0A94H Arabidopsis thaliana Full-length cDNA Co...	123	7e-25
23	emb|BX832125.1|CNS0A0VV Arabidopsis thaliana Full-length cDNA Co...	117	4e-23
24	emb|BX832123.1|CNS0A0V3 Arabidopsis thaliana Full-length cDNA Co...	101	3e-18
25	gb|AF180143.1|AF180143 Glycine max ubiquitin carrier protein 4 (...	96	2e-16
26	gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, c...	88	4e-14
27	gb|BT012754.1| Lycopersicon esculentum clone 113694F, mRNA sequence	78	4e-11
28	ref|XM_636144.1| Dictyostelium discoideum hypothetical protein (...	64	5e-07
29	gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12...	64	5e-07
30	gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24...	64	5e-07
31	gb|L19356.1|ATHUBIQUF Arabidopsis thaliana ubiquitin conjugating...	64	5e-07
32	emb|X71381.1|ATUBC6 A.thaliana gene for ubiquitin carrier protein	58	3e-05
33	gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map...	58	3e-05
34	dbj|AB006707.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	58	3e-05
35	gb|L19355.1|ATHUBIQUE Arabidopsis thaliana ubiquitin conjugating...	58	3e-05
36	gb|L19354.1|ATHUBIQUD Arabidopsis thaliana ubiquitin conjugating...	58	3e-05
37	ref|NM_201489.1| Danio rerio ubiquitin-conjugating enzyme E2H (U...	48	0.033
38	gb|BC049139.1| Danio rerio ubiquitin-conjugating enzyme E2H (UBC...	48	0.033
39	emb|AL590150.2| Zebrafish DNA sequence from clone RP71-3C13 in l...	48	0.033
40	ref|XM_696043.1| PREDICTED: Danio rerio similar to Ubiquitin-con...	48	0.033
41	ref|XM_697420.1| PREDICTED: Danio rerio hypothetical protein LOC...	48	0.033
42	ref|XM_754023.1| Ustilago maydis 521 hypothetical protein (UM029...	46	0.13
43	gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome...	44	0.51
44	gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosom...	44	0.51
45	gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, co...	44	0.51
46	gb|AY299213.1| Schizolobium parahybum clone Sp4 microsatellite s...	42	2.0
47	gb|AC114293.2| Homo sapiens chromosome 5 clone CTD-3219C5, compl...	42	2.0
48	emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in ...	42	2.0
49	gb|AC106740.3| Homo sapiens chromosome 5 clone RP11-100E22, comp...	42	2.0
50	gb|AC091967.3| Homo sapiens chromosome 5 clone RP11-489I4, compl...	42	2.0
51	ref|XM_940469.1| PREDICTED: Homo sapiens KIAA0947 protein (KIAA0...	42	2.0
52	ref|XM_029101.10| PREDICTED: Homo sapiens KIAA0947 protein (KIAA...	42	2.0
53	gb|AC010253.5| Homo sapiens chromosome 5 clone CTC-432B14, compl...	42	2.0
54	gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, comp...	42	2.0
55	ref|NM_122161.1| Arabidopsis thaliana unknown protein AT5G22555 ...	40	7.9
56	gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr...	40	7.9
57	gb|AC186559.1| Gasterosteus aculeatus clone VMRC26-231K03, compl...	40	7.9
58	gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome ...	40	7.9
59	gb|AC121936.2| Mus musculus BAC clone RP24-207J5 from 13, comple...	40	7.9
60	ref|XM_719516.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin-c...	40	7.9
61	ref|XM_735045.1| Plasmodium chabaudi chabaudi ubiquitin-conjugat...	40	7.9
62	emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in...	40	7.9
63	emb|AL121713.24|HSBK211L9 Human DNA sequence from clone CTA-211L...	40	7.9
64	emb|AL035608.11|HS479J7 Human DNA sequence from clone RP3-479J7 ...	40	7.9
65	gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, comp...	40	7.9
66	gb|AC162519.4| Mus musculus chromosome 8, clone RP24-146M21, com...	40	7.9
67	gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map...	40	7.9
68	emb|BX255895.6| Zebrafish DNA sequence from clone CH211-241M14 i...	40	7.9
69	gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cance...	40	7.9
70	dbj|AB012244.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	40	7.9
71	gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complet...	40	7.9
72	emb|AL672233.18| Mouse DNA sequence from clone RP23-54I20 on chr...	40	7.9

---

>dbj|AK066993.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091F02, full
           insert sequence
          Length = 3411

 Score =  371 bits (187), Expect = 2e-99
 Identities = 250/271 (92%)
 Strand = Plus / Minus

                                                                       
Query: 313 ctttcactttttgttcataagcagggcgatctcgcatcataagcgcagcagcctctccgt 372
           ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |
Sbjct: 626 ctttcactttttgttcataagcaggacgatcacgcatcatcagtgcagcagcctctccat 567

                                                                       
Query: 373 ttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacacat 432
           ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 566 ttaatgggtcagaaggatttgggtacaatagaagttgtggaaggaagacttcgaacacat 507

                                                                       
Query: 433 ttactagatcaaacattgggctccatgtctggttgataacatctaaacataccgaaccag 492
           | ||||||||||||||||||||||| |||||||| || ||||| ||||| || |||||||
Sbjct: 506 taactagatcaaacattgggctccacgtctggttaatgacatccaaacacacagaaccag 447

                                                                       
Query: 493 acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
           |||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 446 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 387

                                          
Query: 553 aaggatatgcatcaggcagttctactctaac 583
           |||||||||||||||||| ||||||||||||
Sbjct: 386 aaggatatgcatcaggcaattctactctaac 356



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 66/72 (91%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                        
Query: 19   tgctgcaaattcaattggtcaaactgaagnaaaacaacattggataagatacaagtacac 78
            |||||| |||||||||||||||  ||||| ||| |||||||||| |||||||||||||||
Sbjct: 3324 tgctgcgaattcaattggtcaat-tgaaggaaa-caacattggacaagatacaagtacac 3267

                        
Query: 79   ttatttacatga 90
            ||||||||||||
Sbjct: 3266 ttatttacatga 3255



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 94/111 (84%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                        
Query: 176  tgactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgct 235
            ||||||||||||||| ||||| | |||| | ||||| |||||||||||||| ||||| ||
Sbjct: 3143 tgactaaggatctgggttgccgagtatagcatcatccccggagtcatcttcatcttcact 3084

                                                               
Query: 236  aagctcctcttcgtcactagacttgtcttctggggttatgccagcatcctc 286
            |||    ||||| ||||| ||||| ||||| ||||||| ||||||||||||
Sbjct: 3083 aag---ttcttcatcactcgacttatcttcgggggttacgccagcatcctc 3036

---

>gb|AY111755.1| Zea mays CL20312_1 mRNA sequence
          Length = 907

 Score =  355 bits (179), Expect = 1e-94
 Identities = 350/408 (85%), Gaps = 3/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 176 tgactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgct 235
           |||||| || ||||||||||||| ||| |||||||| || ||||| ||||| ||||| ||
Sbjct: 662 tgactatgggtctggtttgcccattatctcctcatcacccgagtcgtcttcatcttcact 603

                                                                       
Query: 236 aagctcctcttcgtcactagacttgtcttctggggttatgccagcatcctctggtttcgc 295
            |||||   ||||||||| ||||  ||||||||||| |  ||||||||| ||||||| ||
Sbjct: 602 cagctc---ttcgtcactggactgctcttctggggtgacaccagcatcccctggtttggc 546

                                                                       
Query: 296 atacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataag 355
            ||     ||||  | |||||||| |||||||| |||||||||||||| |||||||| | 
Sbjct: 545 gtannnnncacagtactctttcaccttttgttcgtaagcagggcgatcacgcatcatcaa 486

                                                                       
Query: 356 cgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaag 415
           |||||| || ||||| |||||||||||||| ||||| || || |||||||||||||||||
Sbjct: 485 cgcagctgcatctccatttaatggatcagaaggattaggatataacagaagttgtggaag 426

                                                                       
Query: 416 gaagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataacatc 475
           |||||| ||||||||||| || |||||||||||||||||||||||||||||||| |||||
Sbjct: 425 gaagacctcgaacacattgacaagatcaaacattgggctccatgtctggttgatgacatc 366

                                                                       
Query: 476 taaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaacc 535
            ||||| || ||||||||||||||||| ||||| |||||||| |||||||| ||||||||
Sbjct: 365 caaacagactgaaccagacatttcatcgacatttgggtgatatatcttattgatgaaacc 306

                                                           
Query: 536 aattgacggagatttgtaaggatatgcatcaggcagttctactctaac 583
           ||| || || |||||||||||||| ||||| |||||||||||||||||
Sbjct: 305 aatcgatggggatttgtaaggatacgcatctggcagttctactctaac 258

---

>gb|BT016989.1| Zea mays clone EK07D2304F01.c mRNA sequence
          Length = 789

 Score =  349 bits (176), Expect = 6e-93
 Identities = 296/336 (88%)
 Strand = Plus / Minus

                                                                       
Query: 242 ctcttcgtcactagacttgtcttctggggttatgccagcatcctctggtttcgcatactt 301
           |||||| ||||| ||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 548 ctcttcatcactggacttgtcttccggggtgatgccagcgtcctctggtttagcatactt 489

                                                                       
Query: 302 atcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgcagc 361
            |||||| ||||||||||||| ||||||||| |||| ||||| |||||||| || || ||
Sbjct: 488 ttcacaatattctttcactttctgttcataaacaggccgatcacgcatcatcagtgctgc 429

                                                                       
Query: 362 agcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaagac 421
           |||||| || |||||||||||||| ||||||||||||| ||  || ||||||||||| ||
Sbjct: 428 agcctccccatttaatggatcagaaggatttgggtacagcaacagctgtggaaggaatac 369

                                                                       
Query: 422 ttcgaacacatttactagatcaaacattgggctccatgtctggttgataacatctaaaca 481
           ||| || |||||||||||||||||||||||||||||||||||||| || ||||| |||||
Sbjct: 368 ttcaaaaacatttactagatcaaacattgggctccatgtctggtttatgacatccaaaca 309

                                                                       
Query: 482 taccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaaccaattga 541
            || || |||||||| ||||| |||||||||||||||||||| || ||||| || || ||
Sbjct: 308 gacagagccagacatctcatcgacattcgggtgataaatcttgttgatgaagccgatgga 249

                                               
Query: 542 cggagatttgtaaggatatgcatcaggcagttctac 577
           ||| ||||||||||| ||||||||||||||||||||
Sbjct: 248 cggggatttgtaagggtatgcatcaggcagttctac 213



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 42/45 (93%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                        
Query: 50  aaacaacattggataagatacaa-gtacacttatttacatgacat 93
           ||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 766 aaacaacattggagaacatacaaagtacacttatttacatgacat 722

---

>dbj|AK120481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112B17, full
           insert sequence
          Length = 579

 Score =  333 bits (168), Expect = 4e-88
 Identities = 234/256 (91%)
 Strand = Plus / Minus

                                                                       
Query: 328 cataagcagggcgatctcgcatcataagcgcagcagcctctccgtttaatggatcagacg 387
           |||||||||| ||||| |||||||| || |||||||||||||| |||||||| ||||| |
Sbjct: 579 cataagcaggacgatcacgcatcatcagtgcagcagcctctccatttaatgggtcagaag 520

                                                                       
Query: 388 gatttgggtacaacagaagttgtggaaggaagacttcgaacacatttactagatcaaaca 447
           ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 519 gatttgggtacaatagaagttgtggaaggaagacttcgaacacattaactagatcaaaca 460

                                                                       
Query: 448 ttgggctccatgtctggttgataacatctaaacataccgaaccagacatttcatccacat 507
           |||||||||| |||||||| || ||||| ||||| || ||||||||||||||||||||||
Sbjct: 459 ttgggctccacgtctggttaatgacatccaaacacacagaaccagacatttcatccacat 400

                                                                       
Query: 508 tcgggtgataaatcttattaatgaaaccaattgacggagatttgtaaggatatgcatcag 567
           | || ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 399 taggatgataaatcttgttaacgaaaccaatcgacggagatttgtaaggatatgcatcag 340

                           
Query: 568 gcagttctactctaac 583
           ||| | ||||||||||
Sbjct: 339 gcaatcctactctaac 324

---

>gb|AY103864.1| Zea mays PCO154745 mRNA sequence
          Length = 906

 Score =  323 bits (163), Expect = 4e-85
 Identities = 342/401 (85%), Gaps = 3/401 (0%)
 Strand = Plus / Minus

                                                                       
Query: 177 gactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgcta 236
           ||||| ||||| || ||||| | |||| | ||||| |||||||| ||||| || ||||||
Sbjct: 747 gactagggatcaggattgccaagtatagcttcatcaccggagtcgtcttcctcctcgcta 688

                                                                       
Query: 237 agctcctcttcgtcactagacttgtcttctggggttatgccagcatcctctggtttcgca 296
           |||||   ||| ||||| ||||||||||| || || || ||||| ||||||||||| |||
Sbjct: 687 agctc---ttcatcactggacttgtcttccggagtgataccagcgtcctctggtttggca 631

                                                                       
Query: 297 tacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagc 356
           ||||| |||||| ||||||||||||| ||||||||| |||| ||||| |||||||| || 
Sbjct: 630 tacttctcacaatattctttcactttctgttcataaacaggacgatcacgcatcatcagt 571

                                                                       
Query: 357 gcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaagg 416
           || |||||||| || |||||||||||||| |||||||| || |  |  || |||||||||
Sbjct: 570 gctgcagcctccccatttaatggatcagaaggatttggatatagtaacagctgtggaagg 511

                                                                       
Query: 417 aagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataacatct 476
           || ||||| || |||||||||||||||||||||||||||||||||||||| || ||||| 
Sbjct: 510 aatacttcaaaaacatttactagatcaaacattgggctccatgtctggtttatgacatcc 451

                                                                       
Query: 477 aaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaacca 536
           ||||| || || |||||||| ||||| |||||||||||||||||||| || ||||| || 
Sbjct: 450 aaacagacagagccagacatctcatcgacattcgggtgataaatcttgttgatgaagccg 391

                                                    
Query: 537 attgacggagatttgtaaggatatgcatcaggcagttctac 577
           || ||||| ||||||||||| ||||||||||||||||||||
Sbjct: 390 atggacggggatttgtaagggtatgcatcaggcagttctac 350



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 48/53 (90%), Gaps = 1/53 (1%)
 Strand = Plus / Minus

                                                                
Query: 50  aaacaacattggataagatacaag-tacacttatttacatgacatacaaagtt 101
           ||||||||||||| || ||||||| |||||||||||||||| ||| |||||||
Sbjct: 882 aaacaacattggagaacatacaaggtacacttatttacatgccatccaaagtt 830

---

>ref|NM_196743.1| Oryza sativa (japonica cultivar-group) putative acetohydroxyacid
           isomeroreductase (OSJNBa0094K20.18), mRNA
          Length = 588

 Score =  258 bits (130), Expect = 2e-65
 Identities = 231/264 (87%), Gaps = 3/264 (1%)
 Strand = Plus / Minus

                                                                       
Query: 179 ctaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgctaag 238
           |||||||||||| ||||| | |||| | ||||| |||||||||||||| ||||| |||||
Sbjct: 588 ctaaggatctgggttgccgagtatagcatcatccccggagtcatcttcatcttcactaag 529

                                                                       
Query: 239 ctcctcttcgtcactagacttgtcttctggggttatgccagcatcctctggtttcgcata 298
            ||   ||| ||||| ||||| ||||| ||||||| |||||||||||| || || |||||
Sbjct: 528 ttc---ttcatcactcgacttatcttcgggggttacgccagcatcctcgggctttgcata 472

                                                                       
Query: 299 cttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgc 358
            || || ||| |||||||||||||||||||||||||||| ||||| |||||||| || ||
Sbjct: 471 tttttcgcaatattctttcactttttgttcataagcaggacgatcacgcatcatcagtgc 412

                                                                       
Query: 359 agcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaa 418
           |||||||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||
Sbjct: 411 agcagcctctccatttaatgggtcagaaggatttgggtacaatagaagttgtggaaggaa 352

                                   
Query: 419 gacttcgaacacatttactagatc 442
           ||||||||||||||| ||||||||
Sbjct: 351 gacttcgaacacattaactagatc 328



 Score =  186 bits (94), Expect = 5e-44
 Identities = 130/142 (91%)
 Strand = Plus / Minus

                                                                       
Query: 442 caaacattgggctccatgtctggttgataacatctaaacataccgaaccagacatttcat 501
           |||||||||||||||| |||||||| || ||||| ||||| || ||||||||||||||||
Sbjct: 292 caaacattgggctccacgtctggttaatgacatccaaacacacagaaccagacatttcat 233

                                                                       
Query: 502 ccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgtaaggatatg 561
           ||||||| || ||||||||||| |||| ||||||||| ||||||||||||||||||||||
Sbjct: 232 ccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgtaaggatatg 173

                                 
Query: 562 catcaggcagttctactctaac 583
           ||||||||| ||||||||||||
Sbjct: 172 catcaggcaattctactctaac 151

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  186 bits (94), Expect = 5e-44
 Identities = 121/130 (93%)
 Strand = Plus / Minus

                                                                            
Query: 313      ctttcactttttgttcataagcagggcgatctcgcatcataagcgcagcagcctctccgt 372
                ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |
Sbjct: 15667978 ctttcactttttgttcataagcaggacgatcacgcatcatcagtgcagcagcctctccat 15667919

                                                                            
Query: 373      ttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacacat 432
                ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 15667918 ttaatgggtcagaaggatttgggtacaatagaagttgtggaaggaagacttcgaacacat 15667859

                          
Query: 433      ttactagatc 442
                | ||||||||
Sbjct: 15667858 taactagatc 15667849



 Score =  133 bits (67), Expect = 7e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                            
Query: 493      acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
                |||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 15667606 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 15667547

                                               
Query: 553      aaggatatgcatcaggcagttctactctaac 583
                |||||||||||||||||| ||||||||||||
Sbjct: 15667546 aaggatatgcatcaggcaattctactctaac 15667516



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 66/72 (91%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                            
Query: 19       tgctgcaaattcaattggtcaaactgaagnaaaacaacattggataagatacaagtacac 78
                |||||| |||||||||||||||  ||||| ||| |||||||||| |||||||||||||||
Sbjct: 15670676 tgctgcgaattcaattggtcaat-tgaaggaaa-caacattggacaagatacaagtacac 15670619

                            
Query: 79       ttatttacatga 90
                ||||||||||||
Sbjct: 15670618 ttatttacatga 15670607



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 94/111 (84%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                            
Query: 176      tgactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgct 235
                ||||||||||||||| ||||| | |||| | ||||| |||||||||||||| ||||| ||
Sbjct: 15670495 tgactaaggatctgggttgccgagtatagcatcatccccggagtcatcttcatcttcact 15670436

                                                                   
Query: 236      aagctcctcttcgtcactagacttgtcttctggggttatgccagcatcctc 286
                |||    ||||| ||||| ||||| ||||| ||||||| ||||||||||||
Sbjct: 15670435 aag---ttcttcatcactcgacttatcttcgggggttacgccagcatcctc 15670388



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 442      caaacattgggctccatgtctggttgataacatctaaacataccgaaccagac 494
                |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 15667750 caaacattgggctccacgtctggttaatgacatccaaacacacagaaccagac 15667698

---

>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
              complete sequence
          Length = 193119

 Score =  186 bits (94), Expect = 5e-44
 Identities = 121/130 (93%)
 Strand = Plus / Minus

                                                                          
Query: 313    ctttcactttttgttcataagcagggcgatctcgcatcataagcgcagcagcctctccgt 372
              ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |
Sbjct: 155344 ctttcactttttgttcataagcaggacgatcacgcatcatcagtgcagcagcctctccat 155285

                                                                          
Query: 373    ttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacacat 432
              ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 155284 ttaatgggtcagaaggatttgggtacaatagaagttgtggaaggaagacttcgaacacat 155225

                        
Query: 433    ttactagatc 442
              | ||||||||
Sbjct: 155224 taactagatc 155215



 Score =  133 bits (67), Expect = 7e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                          
Query: 493    acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
              |||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 154972 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 154913

                                             
Query: 553    aaggatatgcatcaggcagttctactctaac 583
              |||||||||||||||||| ||||||||||||
Sbjct: 154912 aaggatatgcatcaggcaattctactctaac 154882



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 66/72 (91%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                          
Query: 19     tgctgcaaattcaattggtcaaactgaagnaaaacaacattggataagatacaagtacac 78
              |||||| |||||||||||||||  ||||| ||| |||||||||| |||||||||||||||
Sbjct: 158042 tgctgcgaattcaattggtcaat-tgaaggaaa-caacattggacaagatacaagtacac 157985

                          
Query: 79     ttatttacatga 90
              ||||||||||||
Sbjct: 157984 ttatttacatga 157973



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 94/111 (84%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                          
Query: 176    tgactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgct 235
              ||||||||||||||| ||||| | |||| | ||||| |||||||||||||| ||||| ||
Sbjct: 157861 tgactaaggatctgggttgccgagtatagcatcatccccggagtcatcttcatcttcact 157802

                                                                 
Query: 236    aagctcctcttcgtcactagacttgtcttctggggttatgccagcatcctc 286
              |||    ||||| ||||| ||||| ||||| ||||||| ||||||||||||
Sbjct: 157801 aag---ttcttcatcactcgacttatcttcgggggttacgccagcatcctc 157754



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 442    caaacattgggctccatgtctggttgataacatctaaacataccgaaccagac 494
              |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 155116 caaacattgggctccacgtctggttaatgacatccaaacacacagaaccagac 155064

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  186 bits (94), Expect = 5e-44
 Identities = 121/130 (93%)
 Strand = Plus / Minus

                                                                            
Query: 313      ctttcactttttgttcataagcagggcgatctcgcatcataagcgcagcagcctctccgt 372
                ||||||||||||||||||||||||| ||||| |||||||| || |||||||||||||| |
Sbjct: 15676219 ctttcactttttgttcataagcaggacgatcacgcatcatcagtgcagcagcctctccat 15676160

                                                                            
Query: 373      ttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacacat 432
                ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 15676159 ttaatgggtcagaaggatttgggtacaatagaagttgtggaaggaagacttcgaacacat 15676100

                          
Query: 433      ttactagatc 442
                | ||||||||
Sbjct: 15676099 taactagatc 15676090



 Score =  133 bits (67), Expect = 7e-28
 Identities = 85/91 (93%)
 Strand = Plus / Minus

                                                                            
Query: 493      acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
                |||||||||||||||| || ||||||||||| |||| ||||||||| |||||||||||||
Sbjct: 15675847 acatttcatccacattaggatgataaatcttgttaacgaaaccaatcgacggagatttgt 15675788

                                               
Query: 553      aaggatatgcatcaggcagttctactctaac 583
                |||||||||||||||||| ||||||||||||
Sbjct: 15675787 aaggatatgcatcaggcaattctactctaac 15675757



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 66/72 (91%), Gaps = 2/72 (2%)
 Strand = Plus / Minus

                                                                            
Query: 19       tgctgcaaattcaattggtcaaactgaagnaaaacaacattggataagatacaagtacac 78
                |||||| |||||||||||||||  ||||| ||| |||||||||| |||||||||||||||
Sbjct: 15678917 tgctgcgaattcaattggtcaat-tgaaggaaa-caacattggacaagatacaagtacac 15678860

                            
Query: 79       ttatttacatga 90
                ||||||||||||
Sbjct: 15678859 ttatttacatga 15678848



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 94/111 (84%), Gaps = 3/111 (2%)
 Strand = Plus / Minus

                                                                            
Query: 176      tgactaaggatctggtttgcccactatatcctcatcgccggagtcatcttcgtcttcgct 235
                ||||||||||||||| ||||| | |||| | ||||| |||||||||||||| ||||| ||
Sbjct: 15678736 tgactaaggatctgggttgccgagtatagcatcatccccggagtcatcttcatcttcact 15678677

                                                                   
Query: 236      aagctcctcttcgtcactagacttgtcttctggggttatgccagcatcctc 286
                |||    ||||| ||||| ||||| ||||| ||||||| ||||||||||||
Sbjct: 15678676 aag---ttcttcatcactcgacttatcttcgggggttacgccagcatcctc 15678629



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                     
Query: 442      caaacattgggctccatgtctggttgataacatctaaacataccgaaccagac 494
                |||||||||||||||| |||||||| || ||||| ||||| || |||||||||
Sbjct: 15675991 caaacattgggctccacgtctggttaatgacatccaaacacacagaaccagac 15675939

---

>ref|NM_105055.2| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme AT1G63800 mRNA, complete cds
          Length = 907

 Score =  131 bits (66), Expect = 3e-27
 Identities = 225/278 (80%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgcagca 362
           |||||| | ||||| ||| | |||||||| | ||| ||||| |||||||| |  ||||| 
Sbjct: 508 tcacaatactctttaactctctgttcataggtaggacgatcacgcatcatcaatgcagct 449

                                                                       
Query: 363 gcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaagact 422
           || || || || |||||||| |||||||| || ||||  |||||||| ||||| ||    
Sbjct: 448 gcttcaccattcaatggatctgacggattcggatacagaagaagttgcggaagaaatgtc 389

                                                                       
Query: 423 tcgaacacatttactagatcaaacattgggctccatgtctggttgataacatctaaacat 482
           ||||||||||| || || || ||||| |||||||| |||||||| |||||||||| ||| 
Sbjct: 388 tcgaacacattcaccaggtcgaacatcgggctccaggtctggttaataacatctagacaa 329

                                                                       
Query: 483 accgaaccagacatttcatccacattcgggtgataaatcttattaatgaaaccaattgac 542
           || ||||| ||||||||||| ||||| ||||| || || ||  ||||||||||||  || 
Sbjct: 328 acagaacctgacatttcatcgacattagggtggtatattttggtaatgaaaccaacagat 269

                                                 
Query: 543 ggagatttgtaaggatatgcatcaggcagttctactct 580
           |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 268 ggagatttataaggataagcatcaggaagttcaactct 231

---

>ref|NM_130166.2| Arabidopsis thaliana UBC6 (UBIQUITIN-CONJUGATING ENZYME 6);
           ubiquitin conjugating enzyme AT2G46030 (UBC6) mRNA,
           complete cds
          Length = 1482

 Score =  131 bits (66), Expect = 3e-27
 Identities = 198/242 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 tcctctggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcga 341
           ||||||||||| ||||| || |||||| |||||||||||||  | ||||| || |  || 
Sbjct: 530 tcctctggttttgcatatttctcacaatattctttcactttgagctcataggctgcacgg 471

                                                                       
Query: 342 tctcgcatcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaac 401
           ||||||||||  || | ||| || ||||| || |||||||| || || ||||| || |  
Sbjct: 470 tctcgcatcaacagagaagcggcttctccattaaatggatctgatgggtttggatataga 411

                                                                       
Query: 402 agaagttgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtc 461
           || ||||| |||||||||  ||||||||||||||  |||||||||||||||||||| |||
Sbjct: 410 agcagttgcggaaggaaggattcgaacacatttataagatcaaacattgggctccaagtc 351

                                                                       
Query: 462 tggttgataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatc 521
           ||||| ||||||||||| || || | ||||||   |||||| ||||| ||||||||||||
Sbjct: 350 tggtttataacatctaagcaaacagcaccagaagattcatcgacattagggtgataaatc 291

             
Query: 522 tt 523
           ||
Sbjct: 290 tt 289

---

>gb|AY114061.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5
           (At1g63800) mRNA, complete cds
          Length = 589

 Score =  131 bits (66), Expect = 3e-27
 Identities = 225/278 (80%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgcagca 362
           |||||| | ||||| ||| | |||||||| | ||| ||||| |||||||| |  ||||| 
Sbjct: 431 tcacaatactctttaactctctgttcataggtaggacgatcacgcatcatcaatgcagct 372

                                                                       
Query: 363 gcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaagact 422
           || || || || |||||||| |||||||| || ||||  |||||||| ||||| ||    
Sbjct: 371 gcttcaccattcaatggatctgacggattcggatacagaagaagttgcggaagaaatgtc 312

                                                                       
Query: 423 tcgaacacatttactagatcaaacattgggctccatgtctggttgataacatctaaacat 482
           ||||||||||| || || || ||||| |||||||| |||||||| |||||||||| ||| 
Sbjct: 311 tcgaacacattcaccaggtcgaacatcgggctccaggtctggttaataacatctagacaa 252

                                                                       
Query: 483 accgaaccagacatttcatccacattcgggtgataaatcttattaatgaaaccaattgac 542
           || ||||| ||||||||||| ||||| ||||| || || ||  ||||||||||||  || 
Sbjct: 251 acagaacctgacatttcatcgacattagggtggtatattttggtaatgaaaccaacagat 192

                                                 
Query: 543 ggagatttgtaaggatatgcatcaggcagttctactct 580
           |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 191 ggagatttataaggataagcatcaggaagttcaactct 154

---

>gb|AY074347.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC5
           (At1g63800) mRNA, complete cds
          Length = 915

 Score =  131 bits (66), Expect = 3e-27
 Identities = 225/278 (80%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgcagca 362
           |||||| | ||||| ||| | |||||||| | ||| ||||| |||||||| |  ||||| 
Sbjct: 510 tcacaatactctttaactctctgttcataggtaggacgatcacgcatcatcaatgcagct 451

                                                                       
Query: 363 gcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaagact 422
           || || || || |||||||| |||||||| || ||||  |||||||| ||||| ||    
Sbjct: 450 gcttcaccattcaatggatctgacggattcggatacagaagaagttgcggaagaaatgtc 391

                                                                       
Query: 423 tcgaacacatttactagatcaaacattgggctccatgtctggttgataacatctaaacat 482
           ||||||||||| || || || ||||| |||||||| |||||||| |||||||||| ||| 
Sbjct: 390 tcgaacacattcaccaggtcgaacatcgggctccaggtctggttaataacatctagacaa 331

                                                                       
Query: 483 accgaaccagacatttcatccacattcgggtgataaatcttattaatgaaaccaattgac 542
           || ||||| ||||||||||| ||||| ||||| || || ||  ||||||||||||  || 
Sbjct: 330 acagaacctgacatttcatcgacattagggtggtatattttggtaatgaaaccaacagat 271

                                                 
Query: 543 ggagatttgtaaggatatgcatcaggcagttctactct 580
           |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 270 ggagatttataaggataagcatcaggaagttcaactct 233

---

>emb|BX819316.1|CNS0A9TY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZG03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 661

 Score =  131 bits (66), Expect = 3e-27
 Identities = 198/242 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 tcctctggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcga 341
           ||||||||||| ||||| || |||||| |||||||||||||  | ||||| || |  || 
Sbjct: 350 tcctctggttttgcatatttctcacaatattctttcactttgagctcataggctgcacgg 291

                                                                       
Query: 342 tctcgcatcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaac 401
           ||||||||||  || | ||| || ||||| || |||||||| || || ||||| || |  
Sbjct: 290 tctcgcatcaacagagaagcggcttctccattaaatggatctgatgggtttggatataga 231

                                                                       
Query: 402 agaagttgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtc 461
           || ||||| |||||||||  ||||||||||||||  |||||||||||||||||||| |||
Sbjct: 230 agcagttgcggaaggaaggattcgaacacatttataagatcaaacattgggctccaagtc 171

                                                                       
Query: 462 tggttgataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatc 521
           ||||| ||||||||||| || || | ||||||   |||||| ||||| ||||||||||||
Sbjct: 170 tggtttataacatctaagcaaacagcaccagaagattcatcgacattagggtgataaatc 111

             
Query: 522 tt 523
           ||
Sbjct: 110 tt 109

---

>gb|BT005208.1| Arabidopsis thaliana At2g46030 mRNA, complete cds
          Length = 552

 Score =  131 bits (66), Expect = 3e-27
 Identities = 198/242 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 tcctctggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcga 341
           ||||||||||| ||||| || |||||| |||||||||||||  | ||||| || |  || 
Sbjct: 452 tcctctggttttgcatatttctcacaatattctttcactttgagctcataggctgcacgg 393

                                                                       
Query: 342 tctcgcatcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaac 401
           ||||||||||  || | ||| || ||||| || |||||||| || || ||||| || |  
Sbjct: 392 tctcgcatcaacagagaagcggcttctccattaaatggatctgatgggtttggatataga 333

                                                                       
Query: 402 agaagttgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtc 461
           || ||||| |||||||||  ||||||||||||||  |||||||||||||||||||| |||
Sbjct: 332 agcagttgcggaaggaaggattcgaacacatttataagatcaaacattgggctccaagtc 273

                                                                       
Query: 462 tggttgataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatc 521
           ||||| ||||||||||| || || | ||||||   |||||| ||||| ||||||||||||
Sbjct: 272 tggtttataacatctaagcaaacagcaccagaagattcatcgacattagggtgataaatc 213

             
Query: 522 tt 523
           ||
Sbjct: 212 tt 211

---

>gb|DQ027021.1| Arabidopsis thaliana ubiquitinating enzyme (At2g46030) mRNA,
           complete cds
          Length = 552

 Score =  131 bits (66), Expect = 3e-27
 Identities = 198/242 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 tcctctggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcga 341
           ||||||||||| ||||| || |||||| |||||||||||||  | ||||| || |  || 
Sbjct: 452 tcctctggttttgcatatttctcacaatattctttcactttgagctcataggctgcacgg 393

                                                                       
Query: 342 tctcgcatcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaac 401
           ||||||||||  || | ||| || ||||| || |||||||| || || ||||| || |  
Sbjct: 392 tctcgcatcaacagagaagcggcttctccattaaatggatctgatgggtttggatataga 333

                                                                       
Query: 402 agaagttgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtc 461
           || ||||| |||||||||  ||||||||||||||  |||||||||||||||||||| |||
Sbjct: 332 agcagttgcggaaggaaggattcgaacacatttataagatcaaacattgggctccaagtc 273

                                                                       
Query: 462 tggttgataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatc 521
           ||||| ||||||||||| || || | ||||||   |||||| ||||| ||||||||||||
Sbjct: 272 tggtttataacatctaagcaaacagcaccagaagattcatcgacattagggtgataaatc 213

             
Query: 522 tt 523
           ||
Sbjct: 212 tt 211

---

>gb|DQ027020.1| Arabidopsis thaliana ubiquitinating enzyme (At1g63800) mRNA,
           complete cds
          Length = 558

 Score =  131 bits (66), Expect = 3e-27
 Identities = 225/278 (80%)
 Strand = Plus / Minus

                                                                       
Query: 303 tcacaaaattctttcactttttgttcataagcagggcgatctcgcatcataagcgcagca 362
           |||||| | ||||| ||| | |||||||| | ||| ||||| |||||||| |  ||||| 
Sbjct: 431 tcacaatactctttaactctctgttcataggtaggacgatcacgcatcatcaatgcagct 372

                                                                       
Query: 363 gcctctccgtttaatggatcagacggatttgggtacaacagaagttgtggaaggaagact 422
           || || || || |||||||| |||||||| || ||||  |||||||| ||||| ||    
Sbjct: 371 gcttcaccattcaatggatctgacggattcggatacagaagaagttgcggaagaaatgtc 312

                                                                       
Query: 423 tcgaacacatttactagatcaaacattgggctccatgtctggttgataacatctaaacat 482
           ||||||||||| || || || ||||| |||||||| |||||||| |||||||||| ||| 
Sbjct: 311 tcgaacacattcaccaggtcgaacatcgggctccaggtctggttaataacatctagacaa 252

                                                                       
Query: 483 accgaaccagacatttcatccacattcgggtgataaatcttattaatgaaaccaattgac 542
           || ||||| ||||||||||| ||||| ||||| || || ||  ||||||||||||  || 
Sbjct: 251 acagaacctgacatttcatcgacattagggtggtatattttggtaatgaaaccaacagat 192

                                                 
Query: 543 ggagatttgtaaggatatgcatcaggcagttctactct 580
           |||||||| |||||||| |||||||| ||||| |||||
Sbjct: 191 ggagatttataaggataagcatcaggaagttcaactct 154

---

>ref|NM_123499.3| Arabidopsis thaliana UBC4 (UBIQUITIN CONJUGATING ENZYME 4);
           ubiquitin conjugating enzyme AT5G41340 (UBC4) mRNA,
           complete cds
          Length = 911

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 294 gcatacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcata 353
           |||||||| |||||  ||||||| |||  ||| ||||||||||| ||||| |||||||| 
Sbjct: 614 gcatacttctcacagtattctttaactcgttgctcataagcaggacgatcacgcatcatt 555

                                                                       
Query: 354 agcgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtgga 413
           | ||||||||| ||||| || |||||||| || || ||||| ||||  ||||| || |||
Sbjct: 554 aacgcagcagcttctccattcaatggatctgatgggtttggatacagaagaagctgagga 495

                                                                       
Query: 414 aggaagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataaca 473
           || ||    || |||||||| || || || ||||| || ||||| || ||||| || |||
Sbjct: 494 agaaatgtctcaaacacattcacaaggtcgaacataggactccaagtttggttaatcaca 435

                                                                       
Query: 474 tctaaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaa 533
           |||||||| || ||||| |||| |||||| ||||| || |||||||| ||| ||||||||
Sbjct: 434 tctaaacaaacagaacccgacagttcatcaacattaggatgataaattttagtaatgaaa 375

                                           
Query: 534 ccaattgacggagatttgtaaggatatgcatc 565
           ||||  || |||||||| |||||||| |||||
Sbjct: 374 ccaacagatggagatttataaggataagcatc 343

---

>gb|AY096587.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2-21 kD
           1 (At5g41340) mRNA, complete cds
          Length = 595

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 294 gcatacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcata 353
           |||||||| |||||  ||||||| |||  ||| ||||||||||| ||||| |||||||| 
Sbjct: 440 gcatacttctcacagtattctttaactcgttgctcataagcaggacgatcacgcatcatt 381

                                                                       
Query: 354 agcgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtgga 413
           | ||||||||| ||||| || |||||||| || || ||||| ||||  ||||| || |||
Sbjct: 380 aacgcagcagcttctccattcaatggatctgatgggtttggatacagaagaagctgagga 321

                                                                       
Query: 414 aggaagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataaca 473
           || ||    || |||||||| || || || ||||| || ||||| || ||||| || |||
Sbjct: 320 agaaatgtctcaaacacattcacaaggtcgaacataggactccaagtttggttaatcaca 261

                                                                       
Query: 474 tctaaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaa 533
           |||||||| || ||||| |||| |||||| ||||| || |||||||| ||| ||||||||
Sbjct: 260 tctaaacaaacagaacccgacagttcatcaacattaggatgataaattttagtaatgaaa 201

                                           
Query: 534 ccaattgacggagatttgtaaggatatgcatc 565
           ||||  || |||||||| |||||||| |||||
Sbjct: 200 ccaacagatggagatttataaggataagcatc 169

---

>gb|AY065360.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC4
           (At5g41340) mRNA, complete cds
          Length = 927

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 294 gcatacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcata 353
           |||||||| |||||  ||||||| |||  ||| ||||||||||| ||||| |||||||| 
Sbjct: 614 gcatacttctcacagtattctttaactcgttgctcataagcaggacgatcacgcatcatt 555

                                                                       
Query: 354 agcgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtgga 413
           | ||||||||| ||||| || |||||||| || || ||||| ||||  ||||| || |||
Sbjct: 554 aacgcagcagcttctccattcaatggatctgatgggtttggatacagaagaagctgagga 495

                                                                       
Query: 414 aggaagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataaca 473
           || ||    || |||||||| || || || ||||| || ||||| || ||||| || |||
Sbjct: 494 agaaatgtctcaaacacattcacaaggtcgaacataggactccaagtttggttaatcaca 435

                                                                       
Query: 474 tctaaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaa 533
           |||||||| || ||||| |||| |||||| ||||| || |||||||| ||| ||||||||
Sbjct: 434 tctaaacaaacagaacccgacagttcatcaacattaggatgataaattttagtaatgaaa 375

                                           
Query: 534 ccaattgacggagatttgtaaggatatgcatc 565
           ||||  || |||||||| |||||||| |||||
Sbjct: 374 ccaacagatggagatttataaggataagcatc 343

---

>gb|DQ027019.1| Arabidopsis thaliana ubiquitinating enzyme (At5g41340) mRNA,
           complete cds
          Length = 564

 Score =  127 bits (64), Expect = 4e-26
 Identities = 220/272 (80%)
 Strand = Plus / Minus

                                                                       
Query: 294 gcatacttatcacaaaattctttcactttttgttcataagcagggcgatctcgcatcata 353
           |||||||| |||||  ||||||| |||  ||| ||||||||||| ||||| |||||||| 
Sbjct: 440 gcatacttctcacagtattctttaactcgttgctcataagcaggacgatcacgcatcatt 381

                                                                       
Query: 354 agcgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagttgtgga 413
           | ||||||||| ||||| || |||||||| || || ||||| ||||  ||||| || |||
Sbjct: 380 aacgcagcagcttctccattcaatggatctgatgggtttggatacagaagaagctgagga 321

                                                                       
Query: 414 aggaagacttcgaacacatttactagatcaaacattgggctccatgtctggttgataaca 473
           || ||    || |||||||| || || || ||||| || ||||| || ||||| || |||
Sbjct: 320 agaaatgtctcaaacacattcacaaggtcgaacataggactccaagtttggttaatcaca 261

                                                                       
Query: 474 tctaaacataccgaaccagacatttcatccacattcgggtgataaatcttattaatgaaa 533
           |||||||| || ||||| |||| |||||| ||||| || |||||||| ||| ||||||||
Sbjct: 260 tctaaacaaacagaacccgacagttcatcaacattaggatgataaattttagtaatgaaa 201

                                           
Query: 534 ccaattgacggagatttgtaaggatatgcatc 565
           ||||  || |||||||| |||||||| |||||
Sbjct: 200 ccaacagatggagatttataaggataagcatc 169

---

>emb|BX821930.1|CNS0A94H Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL85ZE12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 745

 Score =  123 bits (62), Expect = 7e-25
 Identities = 197/242 (81%)
 Strand = Plus / Minus

                                                                       
Query: 282 tcctctggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcga 341
           ||||||||||| ||||| || |||||| |||||||||||||  | ||||| || |  || 
Sbjct: 503 tcctctggttttgcatatttctcacaatattctttcactttgagctcataggctgcacgg 444

                                                                       
Query: 342 tctcgcatcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaac 401
           ||||||||||  || | ||| || ||||| || ||||||||  | || ||||| || |  
Sbjct: 443 tctcgcatcaacagagaagcggcttctccattaaatggatctcatgggtttggatataga 384

                                                                       
Query: 402 agaagttgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtc 461
           || ||||| |||||||||  ||||||||||||||  |||||||||||||||||||| |||
Sbjct: 383 agcagttgcggaaggaaggattcgaacacatttataagatcaaacattgggctccaagtc 324

                                                                       
Query: 462 tggttgataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatc 521
           ||||| ||||||||||| || || | ||||||   |||||| ||||| ||||||||||||
Sbjct: 323 tggtttataacatctaagcaaacagcaccagaagattcatcgacattagggtgataaatc 264

             
Query: 522 tt 523
           ||
Sbjct: 263 tt 262

---

>emb|BX832125.1|CNS0A0VV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZC03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1722

 Score =  117 bits (59), Expect = 4e-23
 Identities = 194/239 (81%)
 Strand = Plus / Minus

                                                                       
Query: 327 tcataagcagggcgatctcgcatcataagcgcagcagcctctccgtttaatggatcagac 386
           ||||||||||| ||||| |||||||| | ||||||||| ||||| || |||||||| || 
Sbjct: 961 tcataagcaggacgatcacgcatcattaacgcagcagcttctccattcaatggatctgat 902

                                                                       
Query: 387 ggatttgggtacaacagaagttgtggaaggaagacttcgaacacatttactagatcaaac 446
           || ||||| ||||  ||||| || ||||| ||    || |||||||| || || || |||
Sbjct: 901 gggtttggatacagaagaagctgaggaagaaatgtctcaaacacattcacaaggtcgaac 842

                                                                       
Query: 447 attgggctccatgtctggttgataacatctaaacataccgaaccagacatttcatccaca 506
           || || ||||| || ||||| || ||||||||||| || ||||| |||| |||||| |||
Sbjct: 841 ataggactccaagtttggttaattacatctaaacaaacagaacccgacagttcatcaaca 782

                                                                      
Query: 507 ttcgggtgataaatcttattaatgaaaccaattgacggagatttgtaaggatatgcatc 565
           || || |||||||| ||| ||||||||||||  || |||||||| |||||||| |||||
Sbjct: 781 ttaggatgataaattttagtaatgaaaccaacagatggagatttataaggataagcatc 723

---

>emb|BX832123.1|CNS0A0V3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH53ZB04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1728

 Score =  101 bits (51), Expect = 3e-18
 Identities = 171/211 (81%)
 Strand = Plus / Minus

                                                                       
Query: 327 tcataagcagggcgatctcgcatcataagcgcagcagcctctccgtttaatggatcagac 386
           ||||||||||| ||||| |||||||| | ||||||||| ||||| || |||||||| || 
Sbjct: 962 tcataagcaggacgatcacgcatcattaacgcagcagcttctccattcaatggatctgat 903

                                                                       
Query: 387 ggatttgggtacaacagaagttgtggaaggaagacttcgaacacatttactagatcaaac 446
           || ||||| ||||  ||||| || ||||| ||    || |||||||| || || || |||
Sbjct: 902 gggtttggatacagaagaagctgaggaagaaatgtctcaaacacattcacaaggtcgaac 843

                                                                       
Query: 447 attgggctccatgtctggttgataacatctaaacataccgaaccagacatttcatccaca 506
           || || ||||| || ||||| || ||||||||||| || ||||| |||| |||||| |||
Sbjct: 842 ataggactccaagtttggttaatcacatctaaacaaacagaacccgacagttcatcaaca 783

                                          
Query: 507 ttcgggtgataaatcttattaatgaaaccaa 537
           || || |||||||| ||| ||||||||||||
Sbjct: 782 ttaggatgataaattttagtaatgaaaccaa 752

---

>gb|AF180143.1|AF180143 Glycine max ubiquitin carrier protein 4 (UBC4) mRNA, complete cds
          Length = 757

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 225/284 (79%)
 Strand = Plus / Minus

                                                                       
Query: 288 ggtttcgcatacttatcacaaaattctttcactttttgttcataagcagggcgatctcgc 347
           ||||| |||||||| |||||  | ||||| ||  ||||||||||||  |  ||||| |||
Sbjct: 462 ggtttagcatacttctcacagtactctttaaccctttgttcataagtggctcgatcccgc 403

                                                                       
Query: 348 atcataagcgcagcagcctctccgtttaatggatcagacggatttgggtacaacagaagt 407
           ||||| |  || ||||| || || ||||| || || || ||||| || ||||  ||||||
Sbjct: 402 atcattaaagctgcagcttcaccatttaaggggtctgatggattgggatacagaagaagt 343

                                                                       
Query: 408 tgtggaaggaagacttcgaacacatttactagatcaaacattgggctccatgtctggttg 467
           ||||| || || || || |||||||| || ||||||||||| || ||||| || || |||
Sbjct: 342 tgtggtagaaacacctcaaacacattgacaagatcaaacatgggactccaggtttgattg 283

                                                                       
Query: 468 ataacatctaaacataccgaaccagacatttcatccacattcgggtgataaatcttatta 527
           |||||||| | ||| || || || ||||| ||||| ||||| |||||||| |||||||| 
Sbjct: 282 ataacatcaagacaaactgatcctgacatctcatcaacatttgggtgatagatcttattg 223

                                                       
Query: 528 atgaaaccaattgacggagatttgtaaggatatgcatcaggcag 571
           || || || || || |||||||| |||||||| ||||| |||||
Sbjct: 222 ataaagcctatggaaggagatttataaggataagcatctggcag 179

---

>gb|M28059.1|WHTUBE2 Wheat ubiquitin carrier protein (E2) mRNA, complete cds
          Length = 965

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 98/116 (84%)
 Strand = Plus / Minus

                                                                       
Query: 441 tcaaacattgggctccatgtctggttgataacatctaaacataccgaaccagacatttca 500
           |||||||| |||||||||||||| ||||| ||||| || || || ||||||||||| |||
Sbjct: 344 tcaaacatcgggctccatgtctgattgatcacatccaagcagacagaaccagacatctca 285

                                                                   
Query: 501 tccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgtaagg 556
           || ||||| |||||||| ||||| ||  |||| ||||| || || |||||||||||
Sbjct: 284 tcgacattggggtgatagatcttgttggtgaagccaatggaaggggatttgtaagg 229

---

>gb|BT012754.1| Lycopersicon esculentum clone 113694F, mRNA sequence
          Length = 955

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 117/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 372 tttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacaca 431
           ||||||||||| || ||||| || || | || ||| ||||| || || || ||||| || 
Sbjct: 517 tttaatggatccgaaggattcggatatagcaaaagctgtggcagaaaaacctcgaaaacg 458

                                                                       
Query: 432 tttactagatcaaacattgggctccatgtctggttgataacatctaaacataccgaacca 491
           ||||  ||||||||||| |||||||||| ||| ||||| ||||| |||||||| || |||
Sbjct: 457 tttaagagatcaaacatagggctccatgactgattgatgacatccaaacatacagagcca 398

                                  
Query: 492 gacatttcatccacattcgggtg 514
           ||||  ||||||||||| |||||
Sbjct: 397 gacagctcatccacattagggtg 375

---

>ref|XM_636144.1| Dictyostelium discoideum hypothetical protein (DDB0206370), partial
           mRNA
          Length = 558

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 149/188 (79%)
 Strand = Plus / Minus

                                                                       
Query: 372 tttaatggatcagacggatttgggtacaacagaagttgtggaaggaagacttcgaacaca 431
           |||||||| ||||  ||||||||||| || || | |||||| |  |||| ||| || | |
Sbjct: 362 tttaatgggtcagttggatttgggtataaaagtaattgtggtaaaaagatttcaaaaata 303

                                                                       
Query: 432 tttactagatcaaacattgggctccatgtctggttgataacatctaaacataccgaacca 491
           ||||  || ||||||||||| ||||| || || || |||||||||||||| || ||||||
Sbjct: 302 tttataaggtcaaacattggactccaagtttgattaataacatctaaacaaactgaacca 243

                                                                       
Query: 492 gacatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttg 551
           ||   |  ||| ||||| || |||||||| |||||  ||||||||||||| || ||||| 
Sbjct: 242 gaagctaaatcgacatttggatgataaattttatttgtgaaaccaattgaaggtgattta 183

                   
Query: 552 taaggata 559
           || |||||
Sbjct: 182 tatggata 175

---

>gb|AC010852.7|AC010852 Arabidopsis thaliana chromosome 1 BAC T12P18 genomic sequence, complete
             sequence
          Length = 79469

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                         
Query: 493   acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
             |||||||||| ||||| ||||| || || ||  ||||||||||||  || |||||||| |
Sbjct: 72245 acatttcatcgacattagggtggtatattttggtaatgaaaccaacagatggagatttat 72186

                                         
Query: 553   aaggatatgcatcaggcagttctactct 580
             ||||||| |||||||| ||||| |||||
Sbjct: 72185 aaggataagcatcaggaagttcaactct 72158

---

>gb|AC011622.6|AC011622 Arabidopsis thaliana chromosome 1 BAC F24D7 genomic sequence,
           complete sequence
          Length = 87575

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                       
Query: 493 acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
           |||||||||| ||||| ||||| || || ||  ||||||||||||  || |||||||| |
Sbjct: 313 acatttcatcgacattagggtggtatattttggtaatgaaaccaacagatggagatttat 254

                                       
Query: 553 aaggatatgcatcaggcagttctactct 580
           ||||||| |||||||| ||||| |||||
Sbjct: 253 aaggataagcatcaggaagttcaactct 226

---

>gb|L19356.1|ATHUBIQUF Arabidopsis thaliana ubiquitin conjugating enzyme (UBC5) gene,
            complete cds
          Length = 1888

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                        
Query: 493  acatttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgt 552
            |||||||||| ||||| ||||| || || ||  ||||||||||||  || |||||||| |
Sbjct: 1094 acatttcatcgacattagggtggtatattttggtaatgaaaccaacagatggagatttat 1035

                                        
Query: 553  aaggatatgcatcaggcagttctactct 580
            ||||||| |||||||| ||||| |||||
Sbjct: 1034 aaggataagcatcaggaagttcaactct 1007

---

>emb|X71381.1|ATUBC6 A.thaliana gene for ubiquitin carrier protein
          Length = 1548

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 442  caaacattgggctccatgtctggttgataacatctaa 478
            |||||||||||||||| |||||||| |||||||||||
Sbjct: 1044 caaacattgggctccaagtctggtttataacatctaa 1008

---

>gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map CIC02E07, complete
             sequence
          Length = 110149

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                  
Query: 442   caaacattgggctccatgtctggttgataacatctaa 478
             |||||||||||||||| |||||||| |||||||||||
Sbjct: 90910 caaacattgggctccaagtctggtttataacatctaa 90874

---

>dbj|AB006707.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MYC6
          Length = 82315

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 497   ttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgtaagg 556
             |||||| ||||| || |||||||| ||| ||||||||||||  || |||||||| |||||
Sbjct: 20052 ttcatcaacattaggatgataaattttagtaatgaaaccaacagatggagatttataagg 20111

                      
Query: 557   atatgcatc 565
             ||| |||||
Sbjct: 20112 ataagcatc 20120



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 327   tcataagcagggcgatctcgcatcataagcgcagcagcctctccgtttaatggatcagac 386
             ||||||||||| ||||| |||||||| | ||||||||| ||||| || |||||||| || 
Sbjct: 19699 tcataagcaggacgatcacgcatcattaacgcagcagcttctccattcaatggatctgat 19758

                          
Query: 387   ggatttgggtaca 399
             || ||||| ||||
Sbjct: 19759 gggtttggataca 19771

---

>gb|L19355.1|ATHUBIQUE Arabidopsis thaliana ubiquitin conjugating enzyme (UBC6) gene,
            complete cds
          Length = 1987

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 442  caaacattgggctccatgtctggttgataacatctaa 478
            |||||||||||||||| |||||||| |||||||||||
Sbjct: 1483 caaacattgggctccaagtctggtttataacatctaa 1447

---

>gb|L19354.1|ATHUBIQUD Arabidopsis thaliana ubiquitin conjugating enzyme (UBC4) gene,
            complete cds and flanking regions
          Length = 2278

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                        
Query: 497  ttcatccacattcgggtgataaatcttattaatgaaaccaattgacggagatttgtaagg 556
            |||||| ||||| || |||||||| ||| ||||||||||||  || |||||||| |||||
Sbjct: 1202 ttcatcaacattaggatgataaattttagtaatgaaaccaacagatggagatttataagg 1143

                     
Query: 557  atatgcatc 565
            ||| |||||
Sbjct: 1142 ataagcatc 1134



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 61/73 (83%)
 Strand = Plus / Minus

                                                                        
Query: 327  tcataagcagggcgatctcgcatcataagcgcagcagcctctccgtttaatggatcagac 386
            |||||||||||  |||| |||||||| | ||||||||| ||||| || |||||||| || 
Sbjct: 1555 tcataagcaggatgatcacgcatcattaacgcagcagcttctccattcaatggatctgat 1496

                         
Query: 387  ggatttgggtaca 399
            || ||||| ||||
Sbjct: 1495 gggtttggataca 1483

---

>ref|NM_201489.1| Danio rerio ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast)
           (ube2h), mRNA
          Length = 2790

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 454 tccatgtctggttgataacatctaaaca 481
           |||||||||||||||| |||||||||||
Sbjct: 406 tccatgtctggttgatcacatctaaaca 379

---

>gb|BC049139.1| Danio rerio ubiquitin-conjugating enzyme E2H (UBC8 homolog, yeast),
           mRNA (cDNA clone MGC:55756 IMAGE:3816572), complete cds
          Length = 2790

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 454 tccatgtctggttgataacatctaaaca 481
           |||||||||||||||| |||||||||||
Sbjct: 406 tccatgtctggttgatcacatctaaaca 379

---

>emb|AL590150.2| Zebrafish DNA sequence from clone RP71-3C13 in linkage group 4 Contains
              the 3' end of the ube2h gene for ubiquitin-conjugating
              enzyme E2H (UBC8 homolog, yeast), a novel gene, the nrf1
              gene for nuclear respiratory factor 1 and two CpG islands,
              complete sequence
          Length = 148777

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 454    tccatgtctggttgataacatctaaaca 481
              |||||||||||||||| |||||||||||
Sbjct: 129373 tccatgtctggttgatcacatctaaaca 129400

---

>ref|XM_696043.1| PREDICTED: Danio rerio similar to Ubiquitin-conjugating enzyme E2H
           (UBC8 homolog, yeast) (LOC572334), mRNA
          Length = 2588

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 454 tccatgtctggttgataacatctaaaca 481
           |||||||||||||||| |||||||||||
Sbjct: 376 tccatgtctggttgatcacatctaaaca 349

---

>ref|XM_697420.1| PREDICTED: Danio rerio hypothetical protein LOC554472 (LOC554472),
           mRNA
          Length = 2758

 Score = 48.1 bits (24), Expect = 0.033
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 454 tccatgtctggttgataacatctaaaca 481
           |||||||||||||||| |||||||||||
Sbjct: 405 tccatgtctggttgatcacatctaaaca 378

---

>ref|XM_754023.1| Ustilago maydis 521 hypothetical protein (UM02969.1) partial mRNA
          Length = 1119

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 517 aaatcttattaatgaaaccaattgacggagatttgtaaggata 559
           ||||||| || |||||||| ||||| || ||||||||||||||
Sbjct: 775 aaatcttgttcatgaaaccgattgagggcgatttgtaaggata 733

---

>gb|AC135238.4| Mus musculus BAC clone RP23-314I1 from chromosome 3, complete sequence
          Length = 247498

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 511    ggtgataaatcttattaatgaa 532
              ||||||||||||||||||||||
Sbjct: 241446 ggtgataaatcttattaatgaa 241467

---

>gb|AC122038.3| Mus musculus BAC clone RP24-427G24 from chromosome 3, complete sequence
          Length = 188751

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 511    ggtgataaatcttattaatgaa 532
              ||||||||||||||||||||||
Sbjct: 158577 ggtgataaatcttattaatgaa 158598

---

>gb|AC115919.14| Mus musculus chromosome 3, clone RP24-493L18, complete sequence
          Length = 195790

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 511   ggtgataaatcttattaatgaa 532
             ||||||||||||||||||||||
Sbjct: 15098 ggtgataaatcttattaatgaa 15119

---

>gb|AY299213.1| Schizolobium parahybum clone Sp4 microsatellite sequence
          Length = 661

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 442 caaacattgggctccatgtctggttgataacatctaa 478
           ||||||| || ||||| |||||||| |||||||||||
Sbjct: 178 caaacatgggactccaggtctggttaataacatctaa 214

---

>gb|AC114293.2| Homo sapiens chromosome 5 clone CTD-3219C5, complete sequence
          Length = 52128

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   acttatttacatgacatacaa 97
            |||||||||||||||||||||
Sbjct: 9057 acttatttacatgacatacaa 9037

---

>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4 Contains
              the gene for a novel protein similar to vertebrate TAFA
              protein 5 (TAFA5) and a CpG island, complete sequence
          Length = 174359

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 170    tggcagtgactaaggatctgg 190
              |||||||||||||||||||||
Sbjct: 158358 tggcagtgactaaggatctgg 158338

---

>gb|AC106740.3| Homo sapiens chromosome 5 clone RP11-100E22, complete sequence
          Length = 155443

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 77     acttatttacatgacatacaa 97
              |||||||||||||||||||||
Sbjct: 154946 acttatttacatgacatacaa 154926

---

>gb|AC091967.3| Homo sapiens chromosome 5 clone RP11-489I4, complete sequence
          Length = 187245

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 400   acagaagttgtggaaggaaga 420
             |||||||||||||||||||||
Sbjct: 94746 acagaagttgtggaaggaaga 94766

---

>ref|XM_940469.1| PREDICTED: Homo sapiens KIAA0947 protein (KIAA0947), mRNA
          Length = 8880

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 400 acagaagttgtggaaggaaga 420
           |||||||||||||||||||||
Sbjct: 428 acagaagttgtggaaggaaga 408

---

>ref|XM_029101.10| PREDICTED: Homo sapiens KIAA0947 protein (KIAA0947), mRNA
          Length = 8571

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 400 acagaagttgtggaaggaaga 420
           |||||||||||||||||||||
Sbjct: 428 acagaagttgtggaaggaaga 408

---

>gb|AC010253.5| Homo sapiens chromosome 5 clone CTC-432B14, complete sequence
          Length = 76440

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 400   acagaagttgtggaaggaaga 420
             |||||||||||||||||||||
Sbjct: 34457 acagaagttgtggaaggaaga 34437

---

>gb|AC091978.3| Homo sapiens chromosome 5 clone RP11-531A21, complete sequence
          Length = 192708

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 400    acagaagttgtggaaggaaga 420
              |||||||||||||||||||||
Sbjct: 183535 acagaagttgtggaaggaaga 183515

---

>ref|NM_122161.1| Arabidopsis thaliana unknown protein AT5G22555 mRNA, complete cds
          Length = 480

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   gcaaatgtatgcaatgctgc 24
           ||||||||||||||||||||
Sbjct: 197 gcaaatgtatgcaatgctgc 216

---

>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    ggtacaacagaagttgtgga 413
              ||||||||||||||||||||
Sbjct: 121332 ggtacaacagaagttgtgga 121351

---

>gb|AC186559.1| Gasterosteus aculeatus clone VMRC26-231K03, complete sequence
          Length = 150088

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 404    aagttgtggaaggaagactt 423
              ||||||||||||||||||||
Sbjct: 123247 aagttgtggaaggaagactt 123266

---

>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence
          Length = 197949

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   acaacagaagttgtggaagg 416
             ||||||||||||||||||||
Sbjct: 84712 acaacagaagttgtggaagg 84731

---

>gb|AC121936.2| Mus musculus BAC clone RP24-207J5 from 13, complete sequence
          Length = 157713

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tctttcccagattttctgga 122
             ||||||||||||||||||||
Sbjct: 83896 tctttcccagattttctgga 83915

---

>ref|XM_719516.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin-conjugating enzyme
           (PY00468) partial mRNA
          Length = 522

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 462 tggttgataacatctaaacataccgaaccaga 493
           ||||| ||||||||||||||||| || |||||
Sbjct: 224 tggttaataacatctaaacatacagatccaga 193

---

>ref|XM_735045.1| Plasmodium chabaudi chabaudi ubiquitin-conjugating enzyme,
           (PC000005.01.0) partial mRNA
          Length = 324

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 454 tccatgtctggttgataacatctaaaca 481
           ||||||| ||||| ||||||||||||||
Sbjct: 286 tccatgtttggttaataacatctaaaca 259

---

>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15,
             complete sequence
          Length = 166308

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    gtacacttatttacatgaca 92
             ||||||||||||||||||||
Sbjct: 21272 gtacacttatttacatgaca 21291

---

>emb|AL121713.24|HSBK211L9 Human DNA sequence from clone CTA-211L9 on chromosome 6 Contains the
             gene for KIAA0164 protein, the 5' end of a novel gene and
             two CpG Islands, complete sequence
          Length = 67575

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 517   aaatcttattaatgaaaccaattg 540
             |||| |||||||||||||||||||
Sbjct: 27369 aaatattattaatgaaaccaattg 27392

---

>emb|AL035608.11|HS479J7 Human DNA sequence from clone RP3-479J7 on chromosome Xq21.33-23
             Contains the gene for tenomodulin protein (TNMD), the
             TM4SF6 gene for transmembrane 4 superfamily member 6, the
             5' end of the gene for sushi-repeat protein (SRPUL) and
             two CpG islands, complete sequence
          Length = 97189

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 307   aaaattctttcactttttgttcat 330
             |||||||||||| |||||||||||
Sbjct: 61490 aaaattctttcagtttttgttcat 61467

---

>gb|AC162867.5| Mus musculus chromosome 8, clone RP24-363D7, complete sequence
          Length = 187070

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 516    taaatcttattaatgaaaccaatt 539
              ||||||||||| ||||||||||||
Sbjct: 182860 taaatcttattcatgaaaccaatt 182837

---

>gb|AC162519.4| Mus musculus chromosome 8, clone RP24-146M21, complete sequence
          Length = 150115

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 516    taaatcttattaatgaaaccaatt 539
              ||||||||||| ||||||||||||
Sbjct: 140890 taaatcttattcatgaaaccaatt 140913

---

>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete
             sequence
          Length = 90283

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    aagatacaagtacacttatttaca 87
             ||||||||||||||| ||||||||
Sbjct: 11834 aagatacaagtacacatatttaca 11811

---

>emb|BX255895.6| Zebrafish DNA sequence from clone CH211-241M14 in linkage group 6,
              complete sequence
          Length = 159627

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    acaaaattctttcacttttt 324
              ||||||||||||||||||||
Sbjct: 115120 acaaaattctttcacttttt 115101

---

>gb|AC092181.9| Homo sapiens 3 BAC RP11-735O9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183168

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 302   atcacaaaattctttcactttttg 325
             |||||||||| |||||||||||||
Sbjct: 65209 atcacaaaatactttcactttttg 65232

---

>dbj|AB012244.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQJ16
          Length = 57031

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     gcaaatgtatgcaatgctgc 24
             ||||||||||||||||||||
Sbjct: 43686 gcaaatgtatgcaatgctgc 43705

---

>gb|AC145211.3| Mus musculus BAC clone RP23-419G4 from 8, complete sequence
          Length = 191166

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 170    tggcagtgactaaggatctggttt 193
              |||||||||||||| |||||||||
Sbjct: 182757 tggcagtgactaagaatctggttt 182734

---

>emb|AL672233.18| Mouse DNA sequence from clone RP23-54I20 on chromosome X, complete
             sequence
          Length = 163349

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tctctttcccagattttctg 120
             ||||||||||||||||||||
Sbjct: 34342 tctctttcccagattttctg 34361


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,234,520
Number of Sequences: 3902068
Number of extensions: 5234520
Number of successful extensions: 101573
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101306
Number of HSP's gapped (non-prelim): 239
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---