ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
2dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
3dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic D... 222 9e-55
4dbj|AK067622.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
5gb|AC007743.3| Homo sapiens BAC clone RP11-481J13 from 2, comple... 44 0.45
6emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on ch... 44 0.45
7gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, comple... 42 1.8
8gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, co... 40 7.1
9ref|XM_324024.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
10ref|XM_954119.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.1
11gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complet... 40 7.1
12gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complet... 40 7.1
13gb|AC008071.2| Homo sapiens BAC clone RP11-388L11 from 7, comple... 40 7.1
14emb|BX294013.1|NCX4G11 Neurospora crassa DNA linkage group V Cos... 40 7.1
15emb|AL117390.1|SPAC1805 S.pombe chromosome I cosmid c1805 40 7.1
16gb|AC095049.3| Homo sapiens BAC clone RP11-263F19 from 4, comple... 40 7.1
17gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 m... 40 7.1
18gb|AC073880.5|AC073880 Homo sapiens BAC clone RP11-1136L22 from ... 40 7.1
19gb|AY967522.1| Schmidtea mediterranea clone HE.3.07A mRNA sequence 40 7.1
20ref|XM_232102.3| PREDICTED: Rattus norvegicus similar to chromos... 40 7.1
21dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 40 7.1
22gb|AC006415.11|AC006415 Drosophila melanogaster, chromosome 2L, ... 40 7.1
23gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81... 40 7.1
24emb|AL133157.1|SPAC1B2 S.pombe chromosome I cosmid c1B2 40 7.1
25gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complet... 40 7.1
26gb|AY066996.1| Schmidtea mediterranea clone H.19.8f unknown mRNA... 40 7.1
27emb|AL772290.3| Mouse DNA sequence from clone RP23-66O4 on chrom... 40 7.1 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  222 bits (112), Expect = 9e-55
 Identities = 259/308 (84%)
 Strand = Plus / Plus

                                                                            
Query: 77       gcataatcagcaggtccatatggctggaaccattcagcgaggaatcctttctttcttcta 136
                |||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||| ||
Sbjct: 21384984 gcataatcagcaggcccatatggctggaaccattcagccagtactcctttcttcctttta 21385043

                                                                            
Query: 137      ggattgcatccgatatcttggcacaacaaatcattaaaccaaatattcacagtgcttaaa 196
                || |||||||| || |||||||| || | ||| ||||||||||| || || ||||||| |
Sbjct: 21385044 gggttgcatccaatgtcttggcataagatatcgttaaaccaaatgttaacggtgcttata 21385103

                                                                            
Query: 197      caagatcgtctaaaatactttccattgtaaagattcttgtactttgcccactctgctaca 256
                || || |  | ||| |||||||| |||||||||| ||| || || |||||||||||||||
Sbjct: 21385104 caggacctgcgaaagtactttccgttgtaaagatccttatatttagcccactctgctaca 21385163

                                                                            
Query: 257      ctcccttccatgcgtcttatgcttggcaactggaagccaccagccaggaaatggattacc 316
                ||| ||||||| | |||||||||||| || | ||||| |||| ||||||||||  | |||
Sbjct: 21385164 ctctcttccatacatcttatgcttggtaatttgaagcgaccacccaggaaatgcgtaacc 21385223

                                                                            
Query: 317      caattagctatcctctctgagacatatatgtcggtaaggctctcggaatatccgactatt 376
                ||||| || ||||| |||||| ||||||||| |||||||||||| || ||||| || |||
Sbjct: 21385224 caattggccatcctttctgaggcatatatgttggtaaggctctcagagtatccaacaatt 21385283

                        
Query: 377      gccaactg 384
                || |||||
Sbjct: 21385284 gctaactg 21385291



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                            
Query: 382      ctgtatagtggaaccgatgtatctgatgatcctgccactatatttctgcaccagtttgct 441
                |||||||| || ||||  ||| ||||||| ||||||||| | | | ||||||||||||||
Sbjct: 21385659 ctgtatagagggaccgcagtagctgatgaccctgccactttctctttgcaccagtttgct 21385718

                                                                            
Query: 442      gtgaagatgtccctgagcttctggtctcctttgaatcctgttgctagaattacgatatca 501
                ||||||||||| || || ||||| |||||  | |||||||||||||||||||| || |||
Sbjct: 21385719 gtgaagatgtctctaagtttctgatctcccctaaatcctgttgctagaattacaatgtca 21385778

                         
Query: 502      ctctttatg 510
                |||||||||
Sbjct: 21385779 ctctttatg 21385787
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>dbj|AP005862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0038K02
          Length = 118635

 Score =  222 bits (112), Expect = 9e-55
 Identities = 259/308 (84%)
 Strand = Plus / Plus

                                                                          
Query: 77     gcataatcagcaggtccatatggctggaaccattcagcgaggaatcctttctttcttcta 136
              |||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||| ||
Sbjct: 117363 gcataatcagcaggcccatatggctggaaccattcagccagtactcctttcttcctttta 117422

                                                                          
Query: 137    ggattgcatccgatatcttggcacaacaaatcattaaaccaaatattcacagtgcttaaa 196
              || |||||||| || |||||||| || | ||| ||||||||||| || || ||||||| |
Sbjct: 117423 gggttgcatccaatgtcttggcataagatatcgttaaaccaaatgttaacggtgcttata 117482

                                                                          
Query: 197    caagatcgtctaaaatactttccattgtaaagattcttgtactttgcccactctgctaca 256
              || || |  | ||| |||||||| |||||||||| ||| || || |||||||||||||||
Sbjct: 117483 caggacctgcgaaagtactttccgttgtaaagatccttatatttagcccactctgctaca 117542

                                                                          
Query: 257    ctcccttccatgcgtcttatgcttggcaactggaagccaccagccaggaaatggattacc 316
              ||| ||||||| | |||||||||||| || | ||||| |||| ||||||||||  | |||
Sbjct: 117543 ctctcttccatacatcttatgcttggtaatttgaagcgaccacccaggaaatgcgtaacc 117602

                                                                          
Query: 317    caattagctatcctctctgagacatatatgtcggtaaggctctcggaatatccgactatt 376
              ||||| || ||||| |||||| ||||||||| |||||||||||| || ||||| || |||
Sbjct: 117603 caattggccatcctttctgaggcatatatgttggtaaggctctcagagtatccaacaatt 117662

                      
Query: 377    gccaactg 384
              || |||||
Sbjct: 117663 gctaactg 117670



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                          
Query: 382    ctgtatagtggaaccgatgtatctgatgatcctgccactatatttctgcaccagtttgct 441
              |||||||| || ||||  ||| ||||||| ||||||||| | | | ||||||||||||||
Sbjct: 118038 ctgtatagagggaccgcagtagctgatgaccctgccactttctctttgcaccagtttgct 118097

                                                                          
Query: 442    gtgaagatgtccctgagcttctggtctcctttgaatcctgttgctagaattacgatatca 501
              ||||||||||| || || ||||| |||||  | |||||||||||||||||||| || |||
Sbjct: 118098 gtgaagatgtctctaagtttctgatctcccctaaatcctgttgctagaattacaatgtca 118157

                       
Query: 502    ctctttatg 510
              |||||||||
Sbjct: 118158 ctctttatg 118166
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>dbj|AP005679.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1210_A07
          Length = 131394

 Score =  222 bits (112), Expect = 9e-55
 Identities = 259/308 (84%)
 Strand = Plus / Plus

                                                                        
Query: 77   gcataatcagcaggtccatatggctggaaccattcagcgaggaatcctttctttcttcta 136
            |||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||| ||
Sbjct: 2089 gcataatcagcaggcccatatggctggaaccattcagccagtactcctttcttcctttta 2148

                                                                        
Query: 137  ggattgcatccgatatcttggcacaacaaatcattaaaccaaatattcacagtgcttaaa 196
            || |||||||| || |||||||| || | ||| ||||||||||| || || ||||||| |
Sbjct: 2149 gggttgcatccaatgtcttggcataagatatcgttaaaccaaatgttaacggtgcttata 2208

                                                                        
Query: 197  caagatcgtctaaaatactttccattgtaaagattcttgtactttgcccactctgctaca 256
            || || |  | ||| |||||||| |||||||||| ||| || || |||||||||||||||
Sbjct: 2209 caggacctgcgaaagtactttccgttgtaaagatccttatatttagcccactctgctaca 2268

                                                                        
Query: 257  ctcccttccatgcgtcttatgcttggcaactggaagccaccagccaggaaatggattacc 316
            ||| ||||||| | |||||||||||| || | ||||| |||| ||||||||||  | |||
Sbjct: 2269 ctctcttccatacatcttatgcttggtaatttgaagcgaccacccaggaaatgcgtaacc 2328

                                                                        
Query: 317  caattagctatcctctctgagacatatatgtcggtaaggctctcggaatatccgactatt 376
            ||||| || ||||| |||||| ||||||||| |||||||||||| || ||||| || |||
Sbjct: 2329 caattggccatcctttctgaggcatatatgttggtaaggctctcagagtatccaacaatt 2388

                    
Query: 377  gccaactg 384
            || |||||
Sbjct: 2389 gctaactg 2396



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Plus

                                                                        
Query: 382  ctgtatagtggaaccgatgtatctgatgatcctgccactatatttctgcaccagtttgct 441
            |||||||| || ||||  ||| ||||||| ||||||||| | | | ||||||||||||||
Sbjct: 2764 ctgtatagagggaccgcagtagctgatgaccctgccactttctctttgcaccagtttgct 2823

                                                                        
Query: 442  gtgaagatgtccctgagcttctggtctcctttgaatcctgttgctagaattacgatatca 501
            ||||||||||| || || ||||| |||||  | |||||||||||||||||||| || |||
Sbjct: 2824 gtgaagatgtctctaagtttctgatctcccctaaatcctgttgctagaattacaatgtca 2883

                     
Query: 502  ctctttatg 510
            |||||||||
Sbjct: 2884 ctctttatg 2892
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>dbj|AK067622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108A19, full
            insert sequence
          Length = 1856

 Score =  222 bits (112), Expect = 9e-55
 Identities = 259/308 (84%)
 Strand = Plus / Minus

                                                                        
Query: 77   gcataatcagcaggtccatatggctggaaccattcagcgaggaatcctttctttcttcta 136
            |||||||||||||| ||||||||||||||||||||||| || | ||||||||| ||| ||
Sbjct: 1573 gcataatcagcaggcccatatggctggaaccattcagccagtactcctttcttcctttta 1514

                                                                        
Query: 137  ggattgcatccgatatcttggcacaacaaatcattaaaccaaatattcacagtgcttaaa 196
            || |||||||| || |||||||| || | ||| ||||||||||| || || ||||||| |
Sbjct: 1513 gggttgcatccaatgtcttggcataagatatcgttaaaccaaatgttaacggtgcttata 1454

                                                                        
Query: 197  caagatcgtctaaaatactttccattgtaaagattcttgtactttgcccactctgctaca 256
            || || |  | ||| |||||||| |||||||||| ||| || || |||||||||||||||
Sbjct: 1453 caggacctgcgaaagtactttccgttgtaaagatccttatatttagcccactctgctaca 1394

                                                                        
Query: 257  ctcccttccatgcgtcttatgcttggcaactggaagccaccagccaggaaatggattacc 316
            ||| ||||||| | |||||||||||| || | ||||| |||| ||||||||||  | |||
Sbjct: 1393 ctctcttccatacatcttatgcttggtaatttgaagcgaccacccaggaaatgcgtaacc 1334

                                                                        
Query: 317  caattagctatcctctctgagacatatatgtcggtaaggctctcggaatatccgactatt 376
            ||||| || ||||| |||||| ||||||||| |||||||||||| || ||||| || |||
Sbjct: 1333 caattggccatcctttctgaggcatatatgttggtaaggctctcagagtatccaacaatt 1274

                    
Query: 377  gccaactg 384
            || |||||
Sbjct: 1273 gctaactg 1266



 Score =  105 bits (53), Expect = 1e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                        
Query: 382  ctgtatagtggaaccgatgtatctgatgatcctgccactatatttctgcaccagtttgct 441
            |||||||| || ||||  ||| ||||||| ||||||||| | | | ||||||||||||||
Sbjct: 1240 ctgtatagagggaccgcagtagctgatgaccctgccactttctctttgcaccagtttgct 1181

                                                                        
Query: 442  gtgaagatgtccctgagcttctggtctcctttgaatcctgttgctagaattacgatatca 501
            ||||||||||| || || ||||| |||||  | |||||||||||||||||||| || |||
Sbjct: 1180 gtgaagatgtctctaagtttctgatctcccctaaatcctgttgctagaattacaatgtca 1121

                     
Query: 502  ctctttatg 510
            |||||||||
Sbjct: 1120 ctctttatg 1112
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>gb|AC007743.3| Homo sapiens BAC clone RP11-481J13 from 2, complete sequence
          Length = 141836

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 10    cttttgtcttattcttttgcta 31
             ||||||||||||||||||||||
Sbjct: 32341 cttttgtcttattcttttgcta 32320
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>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete
             sequence
          Length = 150791

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 430   caccagtttgctgtgaagatgt 451
             ||||||||||||||||||||||
Sbjct: 72670 caccagtttgctgtgaagatgt 72691
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>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence
          Length = 207960

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 453    cctgagcttctggtctccttt 473
              |||||||||||||||||||||
Sbjct: 155473 cctgagcttctggtctccttt 155493
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>gb|AC133465.12| Mus musculus chromosome 1, clone RP24-469B15, complete sequence
          Length = 166435

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 466   tctcctttgaatcctgttgc 485
             ||||||||||||||||||||
Sbjct: 41501 tctcctttgaatcctgttgc 41482
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>ref|XM_324024.1| Neurospora crassa OR74A hypothetical protein (NCU04669.1) partial
           mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 ccaggaaatggattacccaa 319
           ||||||||||||||||||||
Sbjct: 269 ccaggaaatggattacccaa 288
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>ref|XM_954119.1| Neurospora crassa OR74A hypothetical protein (NCU04669.1) partial
           mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 300 ccaggaaatggattacccaa 319
           ||||||||||||||||||||
Sbjct: 269 ccaggaaatggattacccaa 288
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>gb|AC005997.3| Homo sapiens PAC clone RP4-558L10 from 7, complete sequence
          Length = 143250

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     caagtgacagatatgctact 59
              ||||||||||||||||||||
Sbjct: 104476 caagtgacagatatgctact 104495
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>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence
          Length = 165179

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 502    ctctttatgctttcttctcc 521
              ||||||||||||||||||||
Sbjct: 162621 ctctttatgctttcttctcc 162602
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>gb|AC008071.2| Homo sapiens BAC clone RP11-388L11 from 7, complete sequence
          Length = 129938

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    cttttgtcttattcttttgc 29
             ||||||||||||||||||||
Sbjct: 33250 cttttgtcttattcttttgc 33269
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>emb|BX294013.1|NCX4G11 Neurospora crassa DNA linkage group V Cosmid contig X4G11
          Length = 119154

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   ccaggaaatggattacccaa 319
             ||||||||||||||||||||
Sbjct: 64002 ccaggaaatggattacccaa 63983
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>emb|AL117390.1|SPAC1805 S.pombe chromosome I cosmid c1805
          Length = 36514

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aaatcattaaaccaaatatt 183
             ||||||||||||||||||||
Sbjct: 32162 aaatcattaaaccaaatatt 32143
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>gb|AC095049.3| Homo sapiens BAC clone RP11-263F19 from 4, complete sequence
          Length = 86308

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 9     tcttttgtcttattcttttgctat 32
             |||||||| |||||||||||||||
Sbjct: 82467 tcttttgtattattcttttgctat 82444
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>gb|AF240628.2|AF240628 Homo sapiens chromosome 21 clone B292N6 map 21q21, complete sequence
          Length = 177273

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tcttttgtcttattcttttg 28
              ||||||||||||||||||||
Sbjct: 176849 tcttttgtcttattcttttg 176830
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>gb|AC073880.5|AC073880 Homo sapiens BAC clone RP11-1136L22 from Y, complete sequence
          Length = 34210

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 244   ccactctgctacactcccttccat 267
             ||||||||||||||||| ||||||
Sbjct: 24704 ccactctgctacactccattccat 24681
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>gb|AY967522.1| Schmidtea mediterranea clone HE.3.07A mRNA sequence
          Length = 996

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 cacaacaaatcattaaaccaaata 181
           ||||||| ||||||||||||||||
Sbjct: 74  cacaacatatcattaaaccaaata 97
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>ref|XM_232102.3| PREDICTED: Rattus norvegicus similar to chromosome 2 open reading
            frame 3; transcription factor 9 (binds GC-rich sequences)
            (predicted) (LOC312474), mRNA
          Length = 2781

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    tcttttgtcttattcttttg 28
            ||||||||||||||||||||
Sbjct: 2688 tcttttgtcttattcttttg 2707
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     atttctgcaccagtttgctg 442
               ||||||||||||||||||||
Sbjct: 1321234 atttctgcaccagtttgctg 1321253
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>gb|AC006415.11|AC006415 Drosophila melanogaster, chromosome 2L, region 40B-40C, BAC clone
             BACR22A22, complete sequence
          Length = 162345

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tgtactttgcccactctgct 253
             ||||||||||||||||||||
Sbjct: 41094 tgtactttgcccactctgct 41113
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>gb|AE003782.4| Drosophila melanogaster chromosome 2L, section 81 of 83 of the complete
             sequence
          Length = 298116

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   tgtactttgcccactctgct 253
             ||||||||||||||||||||
Sbjct: 80508 tgtactttgcccactctgct 80527
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>emb|AL133157.1|SPAC1B2 S.pombe chromosome I cosmid c1B2
          Length = 13599

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 164 aaatcattaaaccaaatatt 183
           ||||||||||||||||||||
Sbjct: 363 aaatcattaaaccaaatatt 344
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>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence
          Length = 192911

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 502   ctctttatgctttcttctcc 521
             ||||||||||||||||||||
Sbjct: 48690 ctctttatgctttcttctcc 48709
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>gb|AY066996.1| Schmidtea mediterranea clone H.19.8f unknown mRNA sequence
          Length = 707

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 158 cacaacaaatcattaaaccaaata 181
           ||||||| ||||||||||||||||
Sbjct: 84  cacaacatatcattaaaccaaata 107
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>emb|AL772290.3| Mouse DNA sequence from clone RP23-66O4 on chromosome 4, complete
             sequence
          Length = 110623

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 208   aaaatactttccattgtaaagatt 231
             |||||||||||||||| |||||||
Sbjct: 39334 aaaatactttccattgcaaagatt 39311


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,264,718
Number of Sequences: 3902068
Number of extensions: 6264718
Number of successful extensions: 103380
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103306
Number of HSP's gapped (non-prelim): 74
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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