ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 355 1e-94
2dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 355 1e-94
3dbj|AK071080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
4dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic D... 355 1e-94
5dbj|AK067611.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
6emb|CR385024.10| Zebrafish DNA sequence from clone CH211-202G4 i... 46 0.14
7emb|CR352304.6| Zebrafish DNA sequence from clone CH211-192F24 i... 46 0.14
8emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 i... 44 0.54
9emb|BX321869.7| Zebrafish DNA sequence from clone CH211-265B24, ... 44 0.54
10gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, comp... 42 2.1
11emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D... 42 2.1
12emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encepha... 42 2.1
13ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2) mRNA... 40 8.4
14ref|XM_877144.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 8.4
15gb|BC056366.1| Mus musculus expressed sequence AU040829, mRNA (c... 40 8.4
16gb|BC059911.1| Mus musculus expressed sequence AU040829, mRNA (c... 40 8.4
17emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4,... 40 8.4
18emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome 5, BA... 40 8.4
19emb|BX957231.6| Zebrafish DNA sequence from clone DKEY-10O22 in ... 40 8.4
20emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chro... 40 8.4
21gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosom... 40 8.4
22gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc... 40 8.4
23dbj|AK079081.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 8.4
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.4
25gb|AF348157.1|AF348157 Mus musculus putative prostate cancer sus... 40 8.4
26emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cDNA Co... 40 8.4
27emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cDNA Co... 40 8.4
28gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270... 40 8.4
29emb|BX284636.7| Zebrafish DNA sequence from clone DKEYP-35F9 in ... 40 8.4
30ref|NM_175003.2| Mus musculus expressed sequence AU040829 (AU040... 40 8.4
31gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, com... 40 8.4
32dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for putative... 40 8.4
33dbj|AB073159.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 8.4
34gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, comple... 40 8.4
35gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (atj) ... 40 8.4 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  355 bits (179), Expect = 1e-94
 Identities = 378/443 (85%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                          
Query: 172    cttcatgcatcctctgattggcgcatgagttcaagtaagctagaagctttcctttttgcg 231
              |||||||| || | || |||| |||||||||| || | ||||||||||||||| ||||| 
Sbjct: 186890 cttcatgcctcatttgcttggtgcatgagttcgaggatgctagaagctttcctctttgca 186831

                                                                          
Query: 232    cggtctgtgccggtttcagacagctccttgagtgcatcttcccctccagctacctttgca 291
              || ||||| || ||||| |||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 186830 cgatctgttccagtttctgacagctccttgagtgcatcctccactccagctgcctttgca 186771

                                                                          
Query: 292    gccatggtttgttcagcatcggcagagcaaagagacaatagaatggctgctgcgttctct 351
              ||||  || || |||| ||| ||||| || ||  || ||||||||||||| |||||||| 
Sbjct: 186770 gccaatgtctgctcagtatcagcagaacagagcaaccatagaatggctgcagcgttctcc 186711

                                                                          
Query: 352    ctattgcgaggagacccggttctgaccacctcgattagtggaggcattggctctgattgt 411
              ||||||||||||||||| ||| |||  ||||| |  |||||||| ||||| |||||  | 
Sbjct: 186710 ctattgcgaggagaccctgttttgataacctcaacaagtggaggaattggttctgaccgc 186651

                                                                          
Query: 412    gtgattacagccttgccttcttggttaccggcaagaatcgacaaaagagtgagtgcctca 471
              |  ||||||  |||||||||| |||| || |||||||| |||| |||| | |||||||| 
Sbjct: 186650 gcaattacaatcttgccttctgggttgcctgcaagaattgacagaagactaagtgcctcg 186591

                                                                          
Query: 472    tcaatcatgcccccagtaggatccaccaagaagttcatcagatgggtgatgattccagct 531
              |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 186590 tcaatcattccccctgtaggatccaccaagaagttcatcagatggatgacgattccagct 186531

                                                                          
Query: 532    ttcaccgcccggaccttattaccctgatatatgcacaggttgaaaatttgccgttgccgc 591
              ||||| ||||||||||| || |||||||||||||||||||| |||| ||||||| || ||
Sbjct: 186530 ttcactgcccggaccttgtttccctgatatatgcacaggtt-aaaaattgccgtcgcagc 186472

                                     
Query: 592    atctttcttgcctcttgggctcc 614
              |||||||||||||||||||||||
Sbjct: 186471 atctttcttgcctcttgggctcc 186449
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075G19
          Length = 163558

 Score =  355 bits (179), Expect = 1e-94
 Identities = 378/443 (85%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                         
Query: 172   cttcatgcatcctctgattggcgcatgagttcaagtaagctagaagctttcctttttgcg 231
             |||||||| || | || |||| |||||||||| || | ||||||||||||||| ||||| 
Sbjct: 51786 cttcatgcctcatttgcttggtgcatgagttcgaggatgctagaagctttcctctttgca 51727

                                                                         
Query: 232   cggtctgtgccggtttcagacagctccttgagtgcatcttcccctccagctacctttgca 291
             || ||||| || ||||| |||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 51726 cgatctgttccagtttctgacagctccttgagtgcatcctccactccagctgcctttgca 51667

                                                                         
Query: 292   gccatggtttgttcagcatcggcagagcaaagagacaatagaatggctgctgcgttctct 351
             ||||  || || |||| ||| ||||| || ||  || ||||||||||||| |||||||| 
Sbjct: 51666 gccaatgtctgctcagtatcagcagaacagagcaaccatagaatggctgcagcgttctcc 51607

                                                                         
Query: 352   ctattgcgaggagacccggttctgaccacctcgattagtggaggcattggctctgattgt 411
             ||||||||||||||||| ||| |||  ||||| |  |||||||| ||||| |||||  | 
Sbjct: 51606 ctattgcgaggagaccctgttttgataacctcaacaagtggaggaattggttctgaccgc 51547

                                                                         
Query: 412   gtgattacagccttgccttcttggttaccggcaagaatcgacaaaagagtgagtgcctca 471
             |  ||||||  |||||||||| |||| || |||||||| |||| |||| | |||||||| 
Sbjct: 51546 gcaattacaatcttgccttctgggttgcctgcaagaattgacagaagactaagtgcctcg 51487

                                                                         
Query: 472   tcaatcatgcccccagtaggatccaccaagaagttcatcagatgggtgatgattccagct 531
             |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 51486 tcaatcattccccctgtaggatccaccaagaagttcatcagatggatgacgattccagct 51427

                                                                         
Query: 532   ttcaccgcccggaccttattaccctgatatatgcacaggttgaaaatttgccgttgccgc 591
             ||||| ||||||||||| || |||||||||||||||||||| |||| ||||||| || ||
Sbjct: 51426 ttcactgcccggaccttgtttccctgatatatgcacaggtt-aaaaattgccgtcgcagc 51368

                                    
Query: 592   atctttcttgcctcttgggctcc 614
             |||||||||||||||||||||||
Sbjct: 51367 atctttcttgcctcttgggctcc 51345
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>dbj|AK071080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078K06, full
            insert sequence
          Length = 2171

 Score =  355 bits (179), Expect = 1e-94
 Identities = 378/443 (85%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                        
Query: 172  cttcatgcatcctctgattggcgcatgagttcaagtaagctagaagctttcctttttgcg 231
            |||||||| || | || |||| |||||||||| || | ||||||||||||||| ||||| 
Sbjct: 1925 cttcatgcctcatttgcttggtgcatgagttcgaggatgctagaagctttcctctttgca 1866

                                                                        
Query: 232  cggtctgtgccggtttcagacagctccttgagtgcatcttcccctccagctacctttgca 291
            || ||||| || ||||| |||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 1865 cgatctgttccagtttctgacagctccttgagtgcatcctccactccagctgcctttgca 1806

                                                                        
Query: 292  gccatggtttgttcagcatcggcagagcaaagagacaatagaatggctgctgcgttctct 351
            ||||  || || |||| ||| ||||| || ||  || ||||||||||||| |||||||| 
Sbjct: 1805 gccaatgtctgctcagtatcagcagaacagagcaaccatagaatggctgcagcgttctcc 1746

                                                                        
Query: 352  ctattgcgaggagacccggttctgaccacctcgattagtggaggcattggctctgattgt 411
            ||||||||||||||||| ||| |||  ||||| |  |||||||| ||||| |||||  | 
Sbjct: 1745 ctattgcgaggagaccctgttttgataacctcaacaagtggaggaattggttctgaccgc 1686

                                                                        
Query: 412  gtgattacagccttgccttcttggttaccggcaagaatcgacaaaagagtgagtgcctca 471
            |  ||||||  |||||||||| |||| || |||||||| |||| |||| | |||||||| 
Sbjct: 1685 gcaattacaatcttgccttctgggttgcctgcaagaattgacagaagactaagtgcctcg 1626

                                                                        
Query: 472  tcaatcatgcccccagtaggatccaccaagaagttcatcagatgggtgatgattccagct 531
            |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 1625 tcaatcattccccctgtaggatccaccaagaagttcatcagatggatgacgattccagct 1566

                                                                        
Query: 532  ttcaccgcccggaccttattaccctgatatatgcacaggttgaaaatttgccgttgccgc 591
            ||||| ||||||||||| || |||||||||||||||||||| |||| ||||||| || ||
Sbjct: 1565 ttcactgcccggaccttgtttccctgatatatgcacaggtt-aaaaattgccgtcgcagc 1507

                                   
Query: 592  atctttcttgcctcttgggctcc 614
            |||||||||||||||||||||||
Sbjct: 1506 atctttcttgcctcttgggctcc 1484
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>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0681G01, complete sequence
          Length = 184118

 Score =  355 bits (179), Expect = 1e-94
 Identities = 378/443 (85%), Gaps = 1/443 (0%)
 Strand = Plus / Plus

                                                                         
Query: 172   cttcatgcatcctctgattggcgcatgagttcaagtaagctagaagctttcctttttgcg 231
             |||||||| || | || |||| |||||||||| || | ||||||||||||||| ||||| 
Sbjct: 33652 cttcatgcctcatttgcttggtgcatgagttcgaggatgctagaagctttcctctttgca 33711

                                                                         
Query: 232   cggtctgtgccggtttcagacagctccttgagtgcatcttcccctccagctacctttgca 291
             || ||||| || ||||| |||||||||||||||||||| ||| |||||||| ||||||||
Sbjct: 33712 cgatctgttccagtttctgacagctccttgagtgcatcctccactccagctgcctttgca 33771

                                                                         
Query: 292   gccatggtttgttcagcatcggcagagcaaagagacaatagaatggctgctgcgttctct 351
             ||||  || || |||| ||| ||||| || ||  || ||||||||||||| |||||||| 
Sbjct: 33772 gccaatgtctgctcagtatcagcagaacagagcaaccatagaatggctgcagcgttctcc 33831

                                                                         
Query: 352   ctattgcgaggagacccggttctgaccacctcgattagtggaggcattggctctgattgt 411
             ||||||||||||||||| ||| |||  ||||| |  |||||||| ||||| |||||  | 
Sbjct: 33832 ctattgcgaggagaccctgttttgataacctcaacaagtggaggaattggttctgaccgc 33891

                                                                         
Query: 412   gtgattacagccttgccttcttggttaccggcaagaatcgacaaaagagtgagtgcctca 471
             |  ||||||  |||||||||| |||| || |||||||| |||| |||| | |||||||| 
Sbjct: 33892 gcaattacaatcttgccttctgggttgcctgcaagaattgacagaagactaagtgcctcg 33951

                                                                         
Query: 472   tcaatcatgcccccagtaggatccaccaagaagttcatcagatgggtgatgattccagct 531
             |||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 33952 tcaatcattccccctgtaggatccaccaagaagttcatcagatggatgacgattccagct 34011

                                                                         
Query: 532   ttcaccgcccggaccttattaccctgatatatgcacaggttgaaaatttgccgttgccgc 591
             ||||| ||||||||||| || |||||||||||||||||||| |||| ||||||| || ||
Sbjct: 34012 ttcactgcccggaccttgtttccctgatatatgcacaggtt-aaaaattgccgtcgcagc 34070

                                    
Query: 592   atctttcttgcctcttgggctcc 614
             |||||||||||||||||||||||
Sbjct: 34071 atctttcttgcctcttgggctcc 34093
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>dbj|AK067611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G15, full
            insert sequence
          Length = 2969

 Score =  353 bits (178), Expect = 4e-94
 Identities = 365/426 (85%), Gaps = 1/426 (0%)
 Strand = Plus / Minus

                                                                        
Query: 189  ttggcgcatgagttcaagtaagctagaagctttcctttttgcgcggtctgtgccggtttc 248
            |||| |||||||||| || | ||||||||||||||| ||||| || ||||| || |||||
Sbjct: 1885 ttggtgcatgagttcgaggatgctagaagctttcctctttgcacgatctgttccagtttc 1826

                                                                        
Query: 249  agacagctccttgagtgcatcttcccctccagctacctttgcagccatggtttgttcagc 308
             |||||||||||||||||||| ||| |||||||| ||||||||||||  || || |||| 
Sbjct: 1825 tgacagctccttgagtgcatcctccactccagctgcctttgcagccaatgtctgctcagt 1766

                                                                        
Query: 309  atcggcagagcaaagagacaatagaatggctgctgcgttctctctattgcgaggagaccc 368
            ||| ||||| || ||  || ||||||||||||| |||||||| |||||||||||||||||
Sbjct: 1765 atcagcagaacagagcaaccatagaatggctgcagcgttctccctattgcgaggagaccc 1706

                                                                        
Query: 369  ggttctgaccacctcgattagtggaggcattggctctgattgtgtgattacagccttgcc 428
             ||| |||  ||||| |  |||||||| ||||| |||||  | |  ||||||  ||||||
Sbjct: 1705 tgttttgataacctcaacaagtggaggaattggttctgaccgcgcaattacaatcttgcc 1646

                                                                        
Query: 429  ttcttggttaccggcaagaatcgacaaaagagtgagtgcctcatcaatcatgcccccagt 488
            |||| |||| || |||||||| |||| |||| | |||||||| |||||||| ||||| ||
Sbjct: 1645 ttctgggttgcctgcaagaattgacagaagactaagtgcctcgtcaatcattccccctgt 1586

                                                                        
Query: 489  aggatccaccaagaagttcatcagatgggtgatgattccagctttcaccgcccggacctt 548
            |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||
Sbjct: 1585 aggatccaccaagaagttcatcagatggatgacgattccagctttcactgcccggacctt 1526

                                                                        
Query: 549  attaccctgatatatgcacaggttgaaaatttgccgttgccgcatctttcttgcctcttg 608
             || |||||||||||||||||||| |||| ||||||| || |||||||||||||||||||
Sbjct: 1525 gtttccctgatatatgcacaggtt-aaaaattgccgtcgcagcatctttcttgcctcttg 1467

                  
Query: 609  ggctcc 614
            ||||||
Sbjct: 1466 ggctcc 1461
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>emb|CR385024.10| Zebrafish DNA sequence from clone CH211-202G4 in linkage group 8,
             complete sequence
          Length = 207510

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 84    aagtcaaacactattcagaagca 106
             |||||||||||||||||||||||
Sbjct: 37506 aagtcaaacactattcagaagca 37484
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>emb|CR352304.6| Zebrafish DNA sequence from clone CH211-192F24 in linkage group 8,
            complete sequence
          Length = 19850

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 84   aagtcaaacactattcagaagca 106
            |||||||||||||||||||||||
Sbjct: 2694 aagtcaaacactattcagaagca 2672
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>emb|CR382378.12| Zebrafish DNA sequence from clone DKEYP-40G12 in linkage group 7,
             complete sequence
          Length = 198471

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 571   ttgaaaatttgccgttgccgca 592
             ||||||||||||||||||||||
Sbjct: 17972 ttgaaaatttgccgttgccgca 17951
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>emb|BX321869.7| Zebrafish DNA sequence from clone CH211-265B24, complete sequence
          Length = 146012

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 571   ttgaaaatttgccgttgccgca 592
             ||||||||||||||||||||||
Sbjct: 47609 ttgaaaatttgccgttgccgca 47588
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>gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, complete sequence
          Length = 182261

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 309   atcggcagagcaaagagacaa 329
             |||||||||||||||||||||
Sbjct: 61473 atcggcagagcaaagagacaa 61493
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>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31
             Contains the 3' end of the gene for a novel DnaJ
             domain-containing protein (KIAA0962, FLJ13743, FLJ12468),
             the AGMAT gene for agmatine ureohydrolase (agmatinase), a
             novel gene (FLJ34180), a novel pseudogene similar to Mus
             musculus ethanol induced 6 (Etohi6), a CD24 antigen (small
             cell lung carcinoma cluster 4 antigen) (CD24) pseudogene,
             the gene for DNA-damage inducible protein 2 (DDI2), the
             RSC1A1 gene for regulatory solute carrier protein family 1
             member 1 and the 5' end of the gene for a novel RUN and PH
             domain-containing protein (KIAA0842), complete sequence
          Length = 170399

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 10    gagttcaatagtatacaacct 30
             |||||||||||||||||||||
Sbjct: 62917 gagttcaatagtatacaacct 62937
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>emb|AL590444.1|CNS07EGB chromosome IV of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 218329

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 586    tgccgcatctttcttgcctct 606
              |||||||||||||||||||||
Sbjct: 122064 tgccgcatctttcttgcctct 122044
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>ref|NM_122127.2| Arabidopsis thaliana ATJ2 AT5G22060 (ATJ2) mRNA, complete cds
          Length = 1565

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tccttgagtgcatcttcccc 275
           ||||||||||||||||||||
Sbjct: 371 tccttgagtgcatcttcccc 352
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>ref|XM_877144.1| PREDICTED: Bos taurus hypothetical protein LOC614362 (LOC614362),
           mRNA
          Length = 534

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 ggagacccggttctgaccac 380
           ||||||||||||||||||||
Sbjct: 212 ggagacccggttctgaccac 193
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>gb|BC056366.1| Mus musculus expressed sequence AU040829, mRNA (cDNA clone MGC:73418
            IMAGE:6825221), complete cds
          Length = 4098

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 514  tgggtgatgattccagcttt 533
            ||||||||||||||||||||
Sbjct: 2997 tgggtgatgattccagcttt 3016
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>gb|BC059911.1| Mus musculus expressed sequence AU040829, mRNA (cDNA clone MGC:69898
            IMAGE:6825221), complete cds
          Length = 4098

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 514  tgggtgatgattccagcttt 533
            ||||||||||||||||||||
Sbjct: 2997 tgggtgatgattccagcttt 3016
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>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12,
             complete sequence
          Length = 138715

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   tgattacagccttgccttct 432
             ||||||||||||||||||||
Sbjct: 97661 tgattacagccttgccttct 97642
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>emb|AL589883.1|ATT6G21 Arabidopsis thaliana DNA chromosome 5, BAC clone T6G21 (ESSA project)
          Length = 149788

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tccttgagtgcatcttcccc 275
             ||||||||||||||||||||
Sbjct: 72814 tccttgagtgcatcttcccc 72833
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>emb|BX957231.6| Zebrafish DNA sequence from clone DKEY-10O22 in linkage group 23,
              complete sequence
          Length = 115957

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     aaagtcaaacactattcagaagca 106
              ||||||||||| ||||||||||||
Sbjct: 101542 aaagtcaaacaatattcagaagca 101519
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>emb|AL663045.7| Mouse DNA sequence from clone RP23-219K7 on chromosome 11 Contains the
             Elac2 gene for elaC homolog 2 (E. coli), a novel gene, a
             peroxiredoxin 6 (Prdx6) pseudogene, a novel gene
             (1700086D15Rik), a novel pseudogene, and two CpG islands,
             complete sequence
          Length = 196566

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgggtgatgattccagcttt 533
             ||||||||||||||||||||
Sbjct: 26796 tgggtgatgattccagcttt 26777
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>gb|AC163901.2| Mus musculus BAC clone RP23-269N21 from chromosome 17, complete sequence
          Length = 202092

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    gctgctgcgttctctctatt 356
              ||||||||||||||||||||
Sbjct: 104852 gctgctgcgttctctctatt 104871
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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   taccctgatatatgcacagg 570
             ||||||||||||||||||||
Sbjct: 62337 taccctgatatatgcacagg 62318
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>dbj|AK079081.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330160D12 product:hypothetical RhoGAP
            domain containing protein, full insert sequence
          Length = 3432

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 514  tgggtgatgattccagcttt 533
            ||||||||||||||||||||
Sbjct: 2317 tgggtgatgattccagcttt 2336
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 413     tgattacagccttgccttct 432
               ||||||||||||||||||||
Sbjct: 9499543 tgattacagccttgccttct 9499524
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>gb|AF348157.1|AF348157 Mus musculus putative prostate cancer susceptibility protein (Elac2)
             gene, complete cds, alternatively spliced
          Length = 34593

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgggtgatgattccagcttt 533
             ||||||||||||||||||||
Sbjct: 32526 tgggtgatgattccagcttt 32507
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>emb|BX831588.1|CNS0A0V0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH17ZB05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1489

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tccttgagtgcatcttcccc 275
           ||||||||||||||||||||
Sbjct: 335 tccttgagtgcatcttcccc 316
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>emb|BX830687.1|CNS0A0QX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS14ZE01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1491

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tccttgagtgcatcttcccc 275
           ||||||||||||||||||||
Sbjct: 330 tccttgagtgcatcttcccc 311
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>gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270N23 map 15q21, complete sequence
          Length = 148147

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     atcaaaagtcaaacactatt 98
              ||||||||||||||||||||
Sbjct: 103170 atcaaaagtcaaacactatt 103189
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>emb|BX284636.7| Zebrafish DNA sequence from clone DKEYP-35F9 in linkage group 14,
              complete sequence
          Length = 171311

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 83     aaagtcaaacactattcagaagca 106
              ||||||||||| ||||||||||||
Sbjct: 112807 aaagtcaaacaatattcagaagca 112784
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>ref|NM_175003.2| Mus musculus expressed sequence AU040829 (AU040829), mRNA
          Length = 4098

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 514  tgggtgatgattccagcttt 533
            ||||||||||||||||||||
Sbjct: 2997 tgggtgatgattccagcttt 3016
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>gb|AF273333.1|AF273333 Lycopersicon esculentum clone BAC 19, complete sequence
          Length = 105308

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    atatcaaaagtcaaacacta 96
             ||||||||||||||||||||
Sbjct: 25435 atatcaaaagtcaaacacta 25416
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>dbj|AK118386.1| Arabidopsis thaliana At5g22060 mRNA for putative DNAJ PROTEIN
           HOMOLOG ATJ, complete cds, clone: RAFL19-64-P10
          Length = 1451

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tccttgagtgcatcttcccc 275
           ||||||||||||||||||||
Sbjct: 317 tccttgagtgcatcttcccc 298
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>dbj|AB073159.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:T2P22
          Length = 81019

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 517   gtgatgattccagctttcac 536
             ||||||||||||||||||||
Sbjct: 58890 gtgatgattccagctttcac 58871
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>gb|AC151280.3| Mus musculus BAC clone RP24-79H13 from 17, complete sequence
          Length = 214433

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    gctgctgcgttctctctatt 356
              ||||||||||||||||||||
Sbjct: 198492 gctgctgcgttctctctatt 198473
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>gb|L36113.1|ATHATJ Arabidopsis thaliana chaperone protein (atj) mRNA, complete cds
          Length = 1443

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 tccttgagtgcatcttcccc 275
           ||||||||||||||||||||
Sbjct: 305 tccttgagtgcatcttcccc 286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,198,905
Number of Sequences: 3902068
Number of extensions: 5198905
Number of successful extensions: 92316
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92213
Number of HSP's gapped (non-prelim): 93
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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