>DPO3A_UREPA (Q9PQ74) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 969

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -1

Query: 429 GEDPACSRSVSGNSIQDHITYLGVSMHAEAWSSCRIVMDYAELRY 295
           G D A   SV+   + D I YLG+ +++  +++ +  +DY +L+Y
Sbjct: 838 GLDYAKDMSVNDRYLDDEIQYLGIDLNSLNYANYKTEIDYNKLKY 882

>MTG8R_XENLA (Q9IAB2) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein|
           1)
          Length = 586

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = -2

Query: 224 EEDTAPSETHVNKLCIIIVAPRTQPVIPL---TASLFLHSEMG*HHHAGLED 78
           E +TAP+E  V ++C I  APR  P + L    ++   H       H  LED
Sbjct: 233 ERETAPAEPPVKRVCTISPAPRHSPALSLPLVNSTSHFHPTPPPLQHYSLED 284

>FGF10_HUMAN (O15520) Fibroblast growth factor 10 precursor (FGF-10)|
           (Keratinocyte growth factor 2)
          Length = 208

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 239 PGCCCCCF 262
           PGCCCCCF
Sbjct: 17  PGCCCCCF 24

>PROB_BORPA (Q7W1P3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 378

 Score = 29.3 bits (64), Expect = 7.1
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 292 LVPQLGVVHNDPAAAPGLRVHAHAQVGYVVLNAVA 396
           L  Q G+   DP   P  R  AHAQ G   L A+A
Sbjct: 178 LTDQRGLYEADPRCDPAARFVAHAQAGDAALEAMA 212

>YIAG_ECOLI (P0A9V5) Putative HTH-type transcriptional regulator yiaG|
          Length = 96

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 408 RSVSGNSIQDHITYLGVSMH-AEAWSSCRIVMDYAELRYKMDLHGNVVLSKQ 256
           R  +G  I D    LGVS+   + W S R+    AEL+    +  N  LSKQ
Sbjct: 42  RKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93

>YIAG_ECOL6 (P0A9V6) Putative HTH-type transcriptional regulator yiaG|
          Length = 96

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 408 RSVSGNSIQDHITYLGVSMH-AEAWSSCRIVMDYAELRYKMDLHGNVVLSKQ 256
           R  +G  I D    LGVS+   + W S R+    AEL+    +  N  LSKQ
Sbjct: 42  RKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93

>YIAG_ECO57 (P0A9V7) Putative HTH-type transcriptional regulator yiaG|
          Length = 96

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = -1

Query: 408 RSVSGNSIQDHITYLGVSMH-AEAWSSCRIVMDYAELRYKMDLHGNVVLSKQ 256
           R  +G  I D    LGVS+   + W S R+    AEL+    +  N  LSKQ
Sbjct: 42  RKGTGLKIDDFARVLGVSVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQ 93

>DPYL3_XENLA (O13022) Dihydropyrimidinase-related protein 3 (DRP-3)|
           (Neural-specific protein 1)
          Length = 571

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 12/91 (13%)
 Frame = +1

Query: 271 DVSMEVHLVPQLG-----------VVHNDPAAAPG-LRVHAHAQVGYVVLNAVAAHRSAA 414
           D+ ME  L+ Q+G           +  N     PG + VH H Q+ Y  +  V       
Sbjct: 34  DIYMEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHLQMPYRGMTTVDDFLQGT 93

Query: 415 CRVFSGVVADLLNRVYQAPEPDIVDPYLSWK 507
               +G    +++ V   PE  + + +  W+
Sbjct: 94  KAALAGGTTMIVDHVIPEPEASLTEAFEKWR 124

>PROB_BORPE (Q7VZX7) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 378

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 292 LVPQLGVVHNDPAAAPGLRVHAHAQVGYVVLNAVA 396
           L  Q G+   DP   P  R  AHAQ G   L A+A
Sbjct: 178 LTDQRGLYEADPRRDPAARFVAHAQAGDAALEAMA 212

>PROB_BORBR (Q7WQL9) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 378

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +1

Query: 292 LVPQLGVVHNDPAAAPGLRVHAHAQVGYVVLNAVA 396
           L  Q G+   DP   P  R  AHAQ G   L A+A
Sbjct: 178 LTDQRGLYEADPRRDPAARFVAHAQAGDAALEAMA 212


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,915,031
Number of Sequences: 219361
Number of extensions: 1670937
Number of successful extensions: 5364
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5345
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)