ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1m21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK058937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 317 3e-83
2gb|U33283.1|OSU33283 Oryza sativa Ca2+ sensitive 3'(2'),5-diphos... 293 4e-76
3gb|AF288075.1|AF288075 Zea mays diphosphonucleotide phosphatase ... 291 2e-75
4gb|AY111987.1| Zea mays CL10219_1 mRNA sequence 210 4e-51
5gb|AY110005.1| Zea mays CL14808_1 mRNA sequence 170 4e-39
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
8emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 149 1e-32
9dbj|AB019227.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 6e-04
10ref|NM_125794.3| Arabidopsis thaliana SAL1; 3'(2'),5'-bisphospha... 50 0.010
11gb|AY034894.1| Arabidopsis thaliana inositol polyphosphate 1-pho... 50 0.010
12emb|BX830296.1|CNS0A02J Arabidopsis thaliana Full-length cDNA Co... 50 0.010
13emb|BX831292.1|CNS09ZDI Arabidopsis thaliana Full-length cDNA Co... 50 0.010
14emb|BX830691.1|CNS09ZGD Arabidopsis thaliana Full-length cDNA Co... 50 0.010
15emb|BX831522.1|CNS09ZLC Arabidopsis thaliana Full-length cDNA Co... 50 0.010
16gb|BT005993.1| Arabidopsis thaliana At5g63980 gene, complete cds 50 0.010
17gb|U40433.1|ATU40433 Arabidopsis thaliana 3'(2'),5'-bisphosphate... 50 0.010
18emb|AJ310755.1|GHI310755 Gossypium hirsutum partial mRNA for 3'(... 44 0.60
19gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 44 0.60
20gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete s... 44 0.60
21gb|U49095.1|IAU49095 Influenza A virus (A/duck/Hong Kong/717/197... 42 2.4
22emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chr... 42 2.4
23gb|AC130895.2| Homo sapiens 12 BAC RP11-115H15 (Roswell Park Can... 42 2.4
24emb|BX831628.1|CNS09ZO5 Arabidopsis thaliana Full-length cDNA Co... 42 2.4
25gb|AC073874.4| Homo sapiens BAC clone RP11-586M15 from 2, comple... 42 2.4
26gb|AC012666.7| Homo sapiens BAC clone RP11-219B1 from 2, complet... 42 2.4
27emb|AJ307061.1|INA307061 Influenza A virus (swine/Cotes d'Armor/... 42 2.4
28emb|Z46438.1|IVNPSH191 Influenza virus H1N1 mRNA for nucleoprote... 42 2.4
29dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.4
30gb|M30749.1|FLANPE Influenza A/swine/Netherlands/12/85 (H1N1) nu... 42 2.4
31dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 42 2.4
32gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hos... 40 9.3
33gb|M63781.1|FLANPAAI Influenza A virus (A/duck/england/1/1962(H4... 40 9.3
34gb|M76603.1|FLATYENG77 Influenza A virus (A/turkey/England/647/1... 40 9.3
35emb|AL590810.8| Human DNA sequence from clone RP11-727K2 on chro... 40 9.3
36emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chr... 40 9.3
37ref|XM_967565.1| PREDICTED: Tribolium castaneum similar to CG770... 40 9.3
38emb|CR293506.10| Zebrafish DNA sequence from clone CH211-144M15 ... 40 9.3
39gb|AY965681.1| Eptatretus stoutii nonfunctional variable lymphoc... 40 9.3
40gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, comple... 40 9.3
41gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, comple... 40 9.3
42emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, ... 40 9.3
43emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chr... 40 9.3
44gb|M27298.1|FLASA72NP Influenza A/shearwater/Australia/72 (H6N5)... 40 9.3
45gb|M24454.1|FLANPCG49 Influenza A/mink/Sweden/84 (H10N4) nucleop... 40 9.3 
>dbj|AK058937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-F07, full
           insert sequence
          Length = 848

 Score =  317 bits (160), Expect = 3e-83
 Identities = 343/404 (84%)
 Strand = Plus / Minus

                                                                       
Query: 221 atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
           ||||| ||||||||  ||||||||||||| ||||| |||||||| | |||||||||||| 
Sbjct: 517 atgatccctgtgtcgagatcaagaaatctccctttggagaaatccaaatcgtttcctgat 458

                                                                       
Query: 281 gcatctttaactacacctccagcttccgtgacgacaattgagccagctgcatgatcccat 340
           |||||| | || | |||||||||||| || ||||| ||||| ||||||||||||||||| 
Sbjct: 457 gcatctgtcaccagacctccagcttctgtcacgacgattgacccagctgcatgatcccag 398

                                                                       
Query: 341 attgtttccctgtaaccctcgtgtgggaaacgccagtaaatggcaccatctccacgggcc 400
           ||  | || |||||||| | |||||| |||||| ||||||||||||| || || ||||| 
Sbjct: 397 atcttctctctgtaacctttgtgtggaaaacgcaagtaaatggcaccgtcacctcgggct 338

                                                                       
Query: 401 agagcaccatattttgcttggctatctattctgactggaggagcttggacaccaagtttc 460
           || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 337 agggcaccgtattttgcttggctatcaattctaactggaggagcttggacaccaagtttc 278

                                                                       
Query: 461 tccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaac 520
           ||||| | |||||| || ||||||||||  | |||||| ||||| ||||| |||||||| 
Sbjct: 277 tccgcaatggagcctgttaaatcacgcaaggagtgtgccccttcgtaggactcaaagaat 218

                                                                       
Query: 521 gaggcattgactggattgtcgatggtacaaacactaatcttttgtggtggagagccatcc 580
           || || | ||||||||||||||||| ||| |||||||||||||||| ||||||||| |  
Sbjct: 217 gaagcttcgactggattgtcgatggaacagacactaatcttttgtgctggagagccctgt 158

                                                       
Query: 581 aaagactgctcttcagcaccacaaccgattgcagctgaaaagag 624
           |||||||   ||||||| |||||||| || | ||| ||||||||
Sbjct: 157 aaagactctacttcagctccacaaccaatagtagcagaaaagag 114
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>gb|U33283.1|OSU33283 Oryza sativa Ca2+ sensitive 3'(2'),5-diphosphonucleoside 3'(2')
            phosphohydrolase mRNA, complete cds
          Length = 1480

 Score =  293 bits (148), Expect = 4e-76
 Identities = 340/404 (84%)
 Strand = Plus / Minus

                                                                        
Query: 221  atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
            ||||| ||||||||  ||||||||||||| ||||| |||||||| | |||||||||||| 
Sbjct: 1148 atgatccctgtgtcgagatcaagaaatctccctttggagaaatccaaatcgtttcctgat 1089

                                                                        
Query: 281  gcatctttaactacacctccagcttccgtgacgacaattgagccagctgcatgatcccat 340
            |||||| | || | |||||||||||| || ||||| ||||| ||||||||||||||||| 
Sbjct: 1088 gcatctgtcaccagacctccagcttctgtcacgacgattgacccagctgcatgatcccag 1029

                                                                        
Query: 341  attgtttccctgtaaccctcgtgtgggaaacgccagtaaatggcaccatctccacgggcc 400
            ||  | || |||||||| | |||||| |||||| ||||||||||||| || || ||||| 
Sbjct: 1028 atcttctctctgtaacctttgtgtggaaaacgcaagtaaatggcaccgtcacctcgggct 969

                                                                        
Query: 401  agagcaccatattttgcttggctatctattctgactggaggagcttggacaccaagtttc 460
            || ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 968  agggcaccgtattttgcttggctatcaattctaactggaggagcttggacaccaagtttc 909

                                                                        
Query: 461  tccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaac 520
            ||||| | |||||| || ||||||||||  | |||||| ||||| ||||| |||||||| 
Sbjct: 908  tccgcaatggagcctgttaaatcacgcaaggagtgtgccccttcgtaggactcaaagaat 849

                                                                        
Query: 521  gaggcattgactggattgtcgatggtacaaacactaatcttttgtggtggagagccatcc 580
            || || | |||||||||||||||||  || | |||||| ||||||| ||||||||| |  
Sbjct: 848  gaagcttcgactggattgtcgatggagcagagactaatgttttgtgctggagagccctgt 789

                                                        
Query: 581  aaagactgctcttcagcaccacaaccgattgcagctgaaaagag 624
            |||||||   ||||||| |||||||| || | ||| ||||||||
Sbjct: 788  aaagactctacttcagctccacaaccaatagtagcagaaaagag 745
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>gb|AF288075.1|AF288075 Zea mays diphosphonucleotide phosphatase 1 mRNA, complete cds
          Length = 1453

 Score =  291 bits (147), Expect = 2e-75
 Identities = 342/407 (84%)
 Strand = Plus / Minus

                                                                        
Query: 221  atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
            ||||||||||||||  |||| |||||||| ||||| |||||||| |  || ||||| |  
Sbjct: 1086 atgatgcctgtgtcgagatccagaaatctccctttggagaaatccaagtcctttcccgca 1027

                                                                        
Query: 281  gcatctttaactacacctccagcttccgtgacgacaattgagccagctgcatgatcccat 340
            |||||| | ||||  ||||||||||| || ||||||||||| ||  ||||||| ||||||
Sbjct: 1026 gcatctgttactatgcctccagcttctgtcacgacaattgatcctcctgcatggtcccat 967

                                                                        
Query: 341  attgtttccctgtaaccctcgtgtgggaaacgccagtaaatggcaccatctccacgggcc 400
            ||| | || || ||||| | |||||| || ||| |||||||||| ||||| || ||||||
Sbjct: 966  attttctctctataacctttgtgtggaaagcgcaagtaaatggcgccatcacctcgggcc 907

                                                                        
Query: 401  agagcaccatattttgcttggctatctattctgactggaggagcttggacaccaagtttc 460
            ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 906  agagcaccatattttgcttggctgtcgattctaactggaggagcttggacaccaagtttc 847

                                                                        
Query: 461  tccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaac 520
            || || |  |||| ||| |||||| |||| | |||||| | ||||||||||||||| || 
Sbjct: 846  tctgcaatagagcgagtcaaatcatgcatggagtgtgcactttcataggattcaaaaaat 787

                                                                        
Query: 521  gaggcattgactggattgtcgatggtacaaacactaatcttttgtggtggagagccatcc 580
            || |||||||| |||||||||||||  |||||||||||||||||||||||||||||||| 
Sbjct: 786  gatgcattgacaggattgtcgatggagcaaacactaatcttttgtggtggagagccatct 727

                                                           
Query: 581  aaagactgctcttcagcaccacaaccgattgcagctgaaaagagggc 627
            || ||||   ||| ||| |||||||| |||| ||| ||||| |||||
Sbjct: 726  aaggactctacttgagccccacaaccaattgtagcagaaaacagggc 680
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>gb|AY111987.1| Zea mays CL10219_1 mRNA sequence
          Length = 771

 Score =  210 bits (106), Expect = 4e-51
 Identities = 235/278 (84%)
 Strand = Plus / Plus

                                                                       
Query: 221 atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
           ||||||||||||||  |||| |||||||| ||||| |||||||| |  |||||||| |  
Sbjct: 440 atgatgcctgtgtcgagatcgagaaatctccctttggagaaatccaagtcgtttcccgca 499

                                                                       
Query: 281 gcatctttaactacacctccagcttccgtgacgacaattgagccagctgcatgatcccat 340
           |||||| | ||||  ||||||||||| || ||||||||||| || |||||||| ||||||
Sbjct: 500 gcatctgttactatgcctccagcttctgtcacgacaattgatcctgctgcatggtcccat 559

                                                                       
Query: 341 attgtttccctgtaaccctcgtgtgggaaacgccagtaaatggcaccatctccacgggcc 400
           ||| | || || ||||| | |||||| || ||| |||||||||| ||||| || ||||||
Sbjct: 560 attttctctctataacctttgtgtggaaagcgcaagtaaatggcgccatcacctcgggcc 619

                                                                       
Query: 401 agagcaccatattttgcttggctatctattctgactggaggagcttggacaccaagtttc 460
           ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 620 agagcaccatattttgcttggctgtcgattctaactggaggagcttggacaccaagtttc 679

                                                 
Query: 461 tccgctacggagccagtaaaatcacgcatcgtgtgtgc 498
           || || |  |||||||| |||||| |||| | ||||||
Sbjct: 680 tctgcaatagagccagtcaaatcatgcatggagtgtgc 717
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>gb|AY110005.1| Zea mays CL14808_1 mRNA sequence
          Length = 1272

 Score =  170 bits (86), Expect = 4e-39
 Identities = 286/356 (80%)
 Strand = Plus / Plus

                                                                       
Query: 212 tttgtagcaatgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcg 271
           ||||| ||||| || ||| |||||||||||||| |||| |||||       || | ||||
Sbjct: 266 tttgttgcaataattcctctgtcacgatcaagatatctacctttgcnnnnntccaaatcg 325

                                                                       
Query: 272 tttcctgaggcatctttaactacacctccagcttccgtgacgacaattgagccagctgca 331
           ||||||| ||||||||| || |  || |||||||| ||||| | |||||| |||||||||
Sbjct: 326 tttcctgcggcatcttttaccatgccaccagcttctgtgacaataattgatccagctgca 385

                                                                       
Query: 332 tgatcccatattgtttccctgtaaccctcgtgtgggaaacgccagtaaatggcaccatct 391
           |||||||| | ||||||  ||||||  | ||| ||||  |||       |||||||||| 
Sbjct: 386 tgatcccaaactgtttctatgtaacttttgtgcgggatgcgcagnnnnntggcaccatca 445

                                                                       
Query: 392 ccacgggccagagcaccatattttgcttggctatctattctgactggaggagcttggaca 451
           ||||| || || ||||||||||||||||||||||| ||||| || ||||||||| |||||
Sbjct: 446 ccacgtgctagggcaccatattttgcttggctatccattctaacaggaggagctcggaca 505

                                                                       
Query: 452 ccaagtttctccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggat 511
           ||||||||||| || | ||||| ||| ||||||||| | | ||||| | ||||| |||||
Sbjct: 506 ccaagtttctctgcaatggagctagttaaatcacgcttggagtgtgatgcttcaaaggat 565

                                                                   
Query: 512 tcaaagaacgaggcattgactggattgtcgatggtacaaacactaatcttttgtgg 567
           |||||||| ||||| |  |||||||| | | |||  ||||||||||||||||||||
Sbjct: 566 tcaaagaatgaggcgtcaactggattattggtggagcaaacactaatcttttgtgg 621
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Plus

                                                                           
Query: 311     acgacaattgagccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaa 370
               ||||| ||||| ||||||||||||||||| ||  | || |||||||| | |||||| |||
Sbjct: 4216173 acgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtggaaaa 4216232

                                                                           
Query: 371     cgccagtaaatggcaccatctccacgggccagagcaccatattttgcttggctatctatt 430
               ||| ||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||
Sbjct: 4216233 cgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctatcaatt 4216292

                                              
Query: 431     ctgactggaggagcttggacaccaagtttct 461
               || ||||||||||||||||||||||||||||
Sbjct: 4216293 ctaactggaggagcttggacaccaagtttct 4216323



 Score =  109 bits (55), Expect = 1e-20
 Identities = 118/139 (84%)
 Strand = Plus / Plus

                                                                           
Query: 323     ccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaacgccagtaaatg 382
               ||||||||||||||||||| || |||  || |||  | |||||| || ||||| ||||||
Sbjct: 4212493 ccagctgcatgatcccatactgcttctttggaacgtttgtgtggaaatcgccaataaatg 4212552

                                                                           
Query: 383     gcaccatctccacgggccagagcaccatattttgcttggctatctattctgactggagga 442
               || ||||| ||  |||| | |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4212553 gcgccatcaccttgggctacagcaccatattttgcttggctatcaattctaactggagga 4212612

                                  
Query: 443     gcttggacaccaagtttct 461
               ||||| | |||||||||||
Sbjct: 4212613 gcttgaataccaagtttct 4212631



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                           
Query: 195     atggcatcaactgtttatttgtagcaatgatgcctgtgtcacgatcaagaaatcttcctt 254
               |||||||||| | ||||||||| ||||| ||||| |  |||||||||||| |||| ||||
Sbjct: 4212259 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 4212318

                                                                   
Query: 255     tcgagaaatcgagatcgtttcctgaggcatctttaactacacctccagcttc 306
               | |||||||| | |||||||||||| |||||||| || | ||||||||||||
Sbjct: 4212319 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttc 4212370



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                           
Query: 221     atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
               ||||| ||||||||  ||||||||||||| ||||| |||||||| | |||||||||||| 
Sbjct: 4215921 atgatccctgtgtcgagatcaagaaatctccctttggagaaatccaaatcgtttcctgat 4215980

                                         
Query: 281     gcatctttaactacacctccagcttc 306
               |||||| | || | ||||||||||||
Sbjct: 4215981 gcatctgtcaccagacctccagcttc 4216006



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                           
Query: 460     ctccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaa 519
               |||||| | |||||| || ||||||||||  | |||||| ||||| ||||| ||||||||
Sbjct: 4216399 ctccgcaatggagcctgttaaatcacgcaaggagtgtgccccttcgtaggactcaaagaa 4216458

                                                        
Query: 520     cgaggcattgactggattgtcgatggtacaaacactaatct 560
                || || | ||||||||||||||||| ||| ||||||||||
Sbjct: 4216459 tgaagcttcgactggattgtcgatggaacagacactaatct 4216499



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 502     ttcataggattcaaagaacgaggcattgactggattg 538
               |||||| ||||||||||| |||||||  |||||||||
Sbjct: 4212755 ttcataagattcaaagaatgaggcatccactggattg 4212791
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Plus

                                                                           
Query: 311     acgacaattgagccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaa 370
               ||||| ||||| ||||||||||||||||| ||  | || |||||||| | |||||| |||
Sbjct: 4216160 acgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtggaaaa 4216219

                                                                           
Query: 371     cgccagtaaatggcaccatctccacgggccagagcaccatattttgcttggctatctatt 430
               ||| ||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||
Sbjct: 4216220 cgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctatcaatt 4216279

                                              
Query: 431     ctgactggaggagcttggacaccaagtttct 461
               || ||||||||||||||||||||||||||||
Sbjct: 4216280 ctaactggaggagcttggacaccaagtttct 4216310



 Score =  109 bits (55), Expect = 1e-20
 Identities = 118/139 (84%)
 Strand = Plus / Plus

                                                                           
Query: 323     ccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaacgccagtaaatg 382
               ||||||||||||||||||| || |||  || |||  | |||||| || ||||| ||||||
Sbjct: 4212480 ccagctgcatgatcccatactgcttctttggaacgtttgtgtggaaatcgccaataaatg 4212539

                                                                           
Query: 383     gcaccatctccacgggccagagcaccatattttgcttggctatctattctgactggagga 442
               || ||||| ||  |||| | |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 4212540 gcgccatcaccttgggctacagcaccatattttgcttggctatcaattctaactggagga 4212599

                                  
Query: 443     gcttggacaccaagtttct 461
               ||||| | |||||||||||
Sbjct: 4212600 gcttgaataccaagtttct 4212618



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Plus

                                                                           
Query: 195     atggcatcaactgtttatttgtagcaatgatgcctgtgtcacgatcaagaaatcttcctt 254
               |||||||||| | ||||||||| ||||| ||||| |  |||||||||||| |||| ||||
Sbjct: 4212246 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 4212305

                                                                   
Query: 255     tcgagaaatcgagatcgtttcctgaggcatctttaactacacctccagcttc 306
               | |||||||| | |||||||||||| |||||||| || | ||||||||||||
Sbjct: 4212306 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttc 4212357



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                           
Query: 221     atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
               ||||| ||||||||  ||||||||||||| ||||| |||||||| | |||||||||||| 
Sbjct: 4215908 atgatccctgtgtcgagatcaagaaatctccctttggagaaatccaaatcgtttcctgat 4215967

                                         
Query: 281     gcatctttaactacacctccagcttc 306
               |||||| | || | ||||||||||||
Sbjct: 4215968 gcatctgtcaccagacctccagcttc 4215993



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Plus

                                                                           
Query: 460     ctccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaa 519
               |||||| | |||||| || ||||||||||  | |||||| ||||| ||||| ||||||||
Sbjct: 4216386 ctccgcaatggagcctgttaaatcacgcaaggagtgtgccccttcgtaggactcaaagaa 4216445

                                                        
Query: 520     cgaggcattgactggattgtcgatggtacaaacactaatct 560
                || || | ||||||||||||||||| ||| ||||||||||
Sbjct: 4216446 tgaagcttcgactggattgtcgatggaacagacactaatct 4216486



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                    
Query: 502     ttcataggattcaaagaacgaggcattgactggattg 538
               |||||| ||||||||||| |||||||  |||||||||
Sbjct: 4212742 ttcataagattcaaagaatgaggcatccactggattg 4212778
to top
>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score =  149 bits (75), Expect = 1e-32
 Identities = 132/151 (87%)
 Strand = Plus / Minus

                                                                         
Query: 311   acgacaattgagccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaa 370
             ||||| ||||| ||||||||||||||||| ||  | || |||||||| | |||||| |||
Sbjct: 67610 acgacgattgacccagctgcatgatcccagatcttctctctgtaacctttgtgtggaaaa 67551

                                                                         
Query: 371   cgccagtaaatggcaccatctccacgggccagagcaccatattttgcttggctatctatt 430
             ||| ||||||||||||| || || ||||| || ||||| ||||||||||||||||| |||
Sbjct: 67550 cgcaagtaaatggcaccgtcacctcgggctagggcaccgtattttgcttggctatcaatt 67491

                                            
Query: 431   ctgactggaggagcttggacaccaagtttct 461
             || ||||||||||||||||||||||||||||
Sbjct: 67490 ctaactggaggagcttggacaccaagtttct 67460



 Score =  109 bits (55), Expect = 1e-20
 Identities = 118/139 (84%)
 Strand = Plus / Minus

                                                                         
Query: 323   ccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaacgccagtaaatg 382
             ||||||||||||||||||| || |||  || |||  | |||||| || ||||| ||||||
Sbjct: 71290 ccagctgcatgatcccatactgcttctttggaacgtttgtgtggaaatcgccaataaatg 71231

                                                                         
Query: 383   gcaccatctccacgggccagagcaccatattttgcttggctatctattctgactggagga 442
             || ||||| ||  |||| | |||||||||||||||||||||||| ||||| |||||||||
Sbjct: 71230 gcgccatcaccttgggctacagcaccatattttgcttggctatcaattctaactggagga 71171

                                
Query: 443   gcttggacaccaagtttct 461
             ||||| | |||||||||||
Sbjct: 71170 gcttgaataccaagtttct 71152



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                         
Query: 195   atggcatcaactgtttatttgtagcaatgatgcctgtgtcacgatcaagaaatcttcctt 254
             |||||||||| | ||||||||| ||||| ||||| |  |||||||||||| |||| ||||
Sbjct: 71524 atggcatcaaatatttatttgttgcaataatgccagcatcacgatcaagatatctacctt 71465

                                                                 
Query: 255   tcgagaaatcgagatcgtttcctgaggcatctttaactacacctccagcttc 306
             | |||||||| | |||||||||||| |||||||| || | ||||||||||||
Sbjct: 71464 tggagaaatccaaatcgtttcctgaagcatcttttaccaaacctccagcttc 71413



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 74/86 (86%)
 Strand = Plus / Minus

                                                                         
Query: 221   atgatgcctgtgtcacgatcaagaaatcttcctttcgagaaatcgagatcgtttcctgag 280
             ||||| ||||||||  ||||||||||||| ||||| |||||||| | |||||||||||| 
Sbjct: 67862 atgatccctgtgtcgagatcaagaaatctccctttggagaaatccaaatcgtttcctgat 67803

                                       
Query: 281   gcatctttaactacacctccagcttc 306
             |||||| | || | ||||||||||||
Sbjct: 67802 gcatctgtcaccagacctccagcttc 67777



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 85/101 (84%)
 Strand = Plus / Minus

                                                                         
Query: 460   ctccgctacggagccagtaaaatcacgcatcgtgtgtgctccttcataggattcaaagaa 519
             |||||| | |||||| || ||||||||||  | |||||| ||||| ||||| ||||||||
Sbjct: 67384 ctccgcaatggagcctgttaaatcacgcaaggagtgtgccccttcgtaggactcaaagaa 67325

                                                      
Query: 520   cgaggcattgactggattgtcgatggtacaaacactaatct 560
              || || | ||||||||||||||||| ||| ||||||||||
Sbjct: 67324 tgaagcttcgactggattgtcgatggaacagacactaatct 67284



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 502   ttcataggattcaaagaacgaggcattgactggattg 538
             |||||| ||||||||||| |||||||  |||||||||
Sbjct: 71028 ttcataagattcaaagaatgaggcatccactggattg 70992
to top
>dbj|AB019227.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBM17
          Length = 52717

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 407   ccatattttgcttggctatctattctgactggaggagcttggacaccaagtttct 461
             ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||||
Sbjct: 37554 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagtttct 37500
to top
>ref|NM_125794.3| Arabidopsis thaliana SAL1; 3'(2'),5'-bisphosphate nucleotidase/
           inositol or phosphatidylinositol phosphatase AT5G63980
           (SAL1) mRNA, complete cds
          Length = 1330

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 930 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 878
to top
>gb|AY034894.1| Arabidopsis thaliana inositol polyphosphate 1-phosphatase FIERY1
           (FRY1) mRNA, complete cds
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 791 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 739
to top
>emb|BX830296.1|CNS0A02J Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB71ZA10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1288

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 926 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 874
to top
>emb|BX831292.1|CNS09ZDI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS76ZB01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1297

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 931 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 879
to top
>emb|BX830691.1|CNS09ZGD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS14ZF01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 928 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 876
to top
>emb|BX831522.1|CNS09ZLC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH12ZC12 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1270

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 919 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 867
to top
>gb|BT005993.1| Arabidopsis thaliana At5g63980 gene, complete cds
          Length = 1062

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 791 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 739
to top
>gb|U40433.1|ATU40433 Arabidopsis thaliana 3'(2'),5'-bisphosphate nucleotidase (SAL1)
           mRNA, complete cds
          Length = 1328

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| ||||||| |||||| |||||
Sbjct: 898 ccatactttgcttggctatcaatacggactggtggagctttgacaccgagttt 846
to top
>emb|AJ310755.1|GHI310755 Gossypium hirsutum partial mRNA for 3'(2'),5'-bisphosphate
           nucleotidase (f1 gene)
          Length = 990

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 88/110 (80%)
 Strand = Plus / Minus

                                                                       
Query: 323 ccagctgcatgatcccatattgtttccctgtaaccctcgtgtgggaaacgccagtaaatg 382
           ||||| ||||||||||||||| |||| |  || || | |||||| | ||||   || |||
Sbjct: 475 ccagcagcatgatcccatattttttctcgataccctttgtgtggaagacgcagatatatg 416

                                                             
Query: 383 gcaccatctccacgggccagagcaccatattttgcttggctatctattct 432
           || |||||||| | ||  ||||||||||| ||||| |||||||| |||||
Sbjct: 415 gctccatctcctctggatagagcaccatactttgcctggctatcaattct 366
to top
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 119     ttaaaaaaccttttacaatgga 140
               ||||||||||||||||||||||
Sbjct: 1354992 ttaaaaaaccttttacaatgga 1355013
to top
>gb|AC150469.3| Atelerix albiventris clone LB4-498C22, complete sequence
          Length = 56862

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 119   ttaaaaaaccttttacaatgga 140
             ||||||||||||||||||||||
Sbjct: 42567 ttaaaaaaccttttacaatgga 42588
to top
>gb|U49095.1|IAU49095 Influenza A virus (A/duck/Hong Kong/717/1979(H1N3)) nucleoprotein
            (NP) mRNA, partial cds
          Length = 1387

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 242  agaaatcttcctttcgagaaatcga 266
            ||||||||||||||||||| |||||
Sbjct: 1246 agaaatcttcctttcgagagatcga 1270
to top
>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a
             pseudogene similar to part of eukaryotic translation
             initiation factor 3, subunit 5 (epsilon) Eif3s5, complete
             sequence
          Length = 160629

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 571   agagccatccaaagactgctc 591
             |||||||||||||||||||||
Sbjct: 31217 agagccatccaaagactgctc 31237
to top
>gb|AC130895.2| Homo sapiens 12 BAC RP11-115H15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 123162

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 206   tgtttatttgtagcaatgatg 226
             |||||||||||||||||||||
Sbjct: 87281 tgtttatttgtagcaatgatg 87301
to top
>emb|BX831628.1|CNS09ZO5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH1ZD02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 931

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 407 ccatattttgcttggctatctattctgactggaggagcttggacaccaagttt 459
           ||||| |||||||||||||| || | |||||| |||||||  ||||| |||||
Sbjct: 577 ccatactttgcttggctatcaatacggactggtggagcttttacacccagttt 525
to top
>gb|AC073874.4| Homo sapiens BAC clone RP11-586M15 from 2, complete sequence
          Length = 18461

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tacacataaacagtgtgaata 52
             |||||||||||||||||||||
Sbjct: 15207 tacacataaacagtgtgaata 15227
to top
>gb|AC012666.7| Homo sapiens BAC clone RP11-219B1 from 2, complete sequence
          Length = 106576

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 610   tgcagctgaaaagagggcccc 630
             |||||||||||||||||||||
Sbjct: 13885 tgcagctgaaaagagggcccc 13865
to top
>emb|AJ307061.1|INA307061 Influenza A virus (swine/Cotes d'Armor/800/00(H1N2)) NP gene for
           nucleoprotein, genomic RNA
          Length = 936

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 242 agaaatcttcctttcgagaaatcga 266
           ||||||||||||||||||| |||||
Sbjct: 798 agaaatcttcctttcgagagatcga 822
to top
>emb|Z46438.1|IVNPSH191 Influenza virus H1N1 mRNA for nucleoprotein (Schleswig-H/1/93)
          Length = 1554

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 242  agaaatcttcctttcgagaaa 262
            |||||||||||||||||||||
Sbjct: 1280 agaaatcttcctttcgagaaa 1300
to top
>dbj|AP002886.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1133J7, complete
              sequences
          Length = 168406

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 417    cttggctatctattctgactg 437
              |||||||||||||||||||||
Sbjct: 163222 cttggctatctattctgactg 163202
to top
>gb|M30749.1|FLANPE Influenza A/swine/Netherlands/12/85 (H1N1) nucleoprotein (seg 5)
            mRNA, complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 242  agaaatcttcctttcgagaaa 262
            |||||||||||||||||||||
Sbjct: 1291 agaaatcttcctttcgagaaa 1311
to top
>dbj|AP003775.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-206H19, complete
            sequences
          Length = 179680

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 417  cttggctatctattctgactg 437
            |||||||||||||||||||||
Sbjct: 8411 cttggctatctattctgactg 8391
to top
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 196424

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 280   ggcatctttaactacacctc 299
             ||||||||||||||||||||
Sbjct: 23740 ggcatctttaactacacctc 23721
to top
>gb|M63781.1|FLANPAAI Influenza A virus (A/duck/england/1/1962(H4N6)) nucleoprotein (NP)
            gene, complete cds
          Length = 1565

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  aagaaatcttcctttcgaga 260
            ||||||||||||||||||||
Sbjct: 1290 aagaaatcttcctttcgaga 1309
to top
>gb|M76603.1|FLATYENG77 Influenza A virus (A/turkey/England/647/1977(H1N1)) nucleoprotein
            mRNA, complete cds
          Length = 1565

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  aagaaatcttcctttcgaga 260
            ||||||||||||||||||||
Sbjct: 1290 aagaaatcttcctttcgaga 1309
to top
>emb|AL590810.8| Human DNA sequence from clone RP11-727K2 on chromosome X, complete
           sequence
          Length = 28731

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                      
Query: 97  caacttcagtaacagggnaaggttaaa 123
           |||||||||||||||||  ||||||||
Sbjct: 326 caacttcagtaacaggggtaggttaaa 352
to top
>emb|AL445586.6| Human DNA sequence from clone RP11-352F21 on chromosome 9, complete
              sequence
          Length = 198498

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cagtgtgaataaatgaacaa 61
              ||||||||||||||||||||
Sbjct: 163555 cagtgtgaataaatgaacaa 163574
to top
>ref|XM_967565.1| PREDICTED: Tribolium castaneum similar to CG7706-PA (LOC661407),
           mRNA
          Length = 1960

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 515 aagaacgaggcattgactgg 534
           ||||||||||||||||||||
Sbjct: 744 aagaacgaggcattgactgg 763
to top
>emb|CR293506.10| Zebrafish DNA sequence from clone CH211-144M15 in linkage group 1,
             complete sequence
          Length = 70042

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    aaacagtgtgaataaatgaa 58
             ||||||||||||||||||||
Sbjct: 26047 aaacagtgtgaataaatgaa 26028
to top
>gb|AY965681.1| Eptatretus stoutii nonfunctional variable lymphocyte receptor B (VLRB)
             gene, complete sequence
          Length = 76730

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    atcattattttggaccaatc 96
             ||||||||||||||||||||
Sbjct: 31982 atcattattttggaccaatc 32001
to top
>gb|AC091742.5| Homo sapiens BAC clone RP11-1220K2 from 7, complete sequence
          Length = 191041

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 405    caccatattttgcttggctatcta 428
              |||||||||||||||| |||||||
Sbjct: 151912 caccatattttgcttgcctatcta 151935
to top
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence
          Length = 170801

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 486    gcatcgtgtgtgctccttcatagg 509
              |||||||||||||| |||||||||
Sbjct: 136390 gcatcgtgtgtgcttcttcatagg 136367
to top
>emb|AL773601.11| Zebrafish DNA sequence from clone CH211-199O1, complete sequence
          Length = 201299

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     acagtgtgaataaatgaaca 60
              ||||||||||||||||||||
Sbjct: 197933 acagtgtgaataaatgaaca 197952
to top
>emb|AL732564.12| Mouse DNA sequence from clone RP23-442G9 on chromosome 2, complete
              sequence
          Length = 211657

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    ggcatctttaactacacctc 299
              ||||||||||||||||||||
Sbjct: 167127 ggcatctttaactacacctc 167146
to top
>gb|M27298.1|FLASA72NP Influenza A/shearwater/Australia/72 (H6N5), nucleoprotein (seg. 5),
            genomic RNA
          Length = 1565

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  aagaaatcttcctttcgaga 260
            ||||||||||||||||||||
Sbjct: 1290 aagaaatcttcctttcgaga 1309
to top
>gb|M24454.1|FLANPCG49 Influenza A/mink/Sweden/84 (H10N4) nucleoprotein (NP) gene (seg 5),
            complete cds
          Length = 1565

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  aagaaatcttcctttcgaga 260
            ||||||||||||||||||||
Sbjct: 1290 aagaaatcttcctttcgaga 1309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,791,213
Number of Sequences: 3902068
Number of extensions: 5791213
Number of successful extensions: 105972
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105800
Number of HSP's gapped (non-prelim): 168
length of query: 680
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 657
effective length of database: 17,143,297,704
effective search space: 11263146591528
effective search space used: 11263146591528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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