ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd2b17 |
|---|---|
| Clone Library Name | barley_pub |
>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat| shock protein 26A) (G2-4) Length = 225 Score = 63.5 bits (153), Expect = 6e-10 Identities = 30/76 (39%), Positives = 47/76 (61%) Frame = -2 Query: 555 KEFFAGESVGLVDLSLGAMAYVVPMYEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKDHP 376 K+FF GE GLVD++ +A+ +P+++EI G++L T E+FP L W FL P V + Sbjct: 145 KKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVL 204 Query: 375 PPVERLIPRYRAMREA 328 PP + L ++A E+ Sbjct: 205 PPRDPLFAYFKARYES 220
>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT1/PCNT110) Length = 223 Score = 60.8 bits (146), Expect = 4e-09 Identities = 26/76 (34%), Positives = 45/76 (59%) Frame = -2 Query: 555 KEFFAGESVGLVDLSLGAMAYVVPMYEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKDHP 376 K+FF G+ G D++ +A+ + ++EE GV LVT E+FP+ W G ++ +K+ Sbjct: 139 KKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESL 198 Query: 375 PPVERLIPRYRAMREA 328 PP + L+ YR+ +A Sbjct: 199 PPRDELLAFYRSRCQA 214
>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT103) Length = 223 Score = 55.8 bits (133), Expect = 1e-07 Identities = 30/102 (29%), Positives = 51/102 (50%) Frame = -2 Query: 633 GEDQEAARGASXXXXXXXXXXLAVGGKEFFAGESVGLVDLSLGAMAYVVPMYEEIVGVRL 454 GE+QE +G + K+FF G+ G D++ + + + ++EE GV L Sbjct: 115 GEEQE--KGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVL 172 Query: 453 VTEERFPSLSAWMGRFLGSPPVKDHPPPVERLIPRYRAMREA 328 VT E+FP+ S W ++ VK+ P + L+ +RA +A Sbjct: 173 VTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQA 214
>GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PGNT35/PCNT111) Length = 223 Score = 53.5 bits (127), Expect = 6e-07 Identities = 29/102 (28%), Positives = 50/102 (49%) Frame = -2 Query: 633 GEDQEAARGASXXXXXXXXXXLAVGGKEFFAGESVGLVDLSLGAMAYVVPMYEEIVGVRL 454 GE+QE +G + K+FFAG+ G D++ + + + ++EE G L Sbjct: 115 GEEQE--KGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVL 172 Query: 453 VTEERFPSLSAWMGRFLGSPPVKDHPPPVERLIPRYRAMREA 328 V E+FP+ S W ++ V + PP + L+ +RA +A Sbjct: 173 VKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAFFRARFQA 214
>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 47.8 bits (112), Expect = 3e-05 Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 4/101 (3%) Frame = -2 Query: 663 PIWKWFTTAPGEDQEAARGASXXXXXXXXXXLAVG----GKEFFAGESVGLVDLSLGAMA 496 P W ++E A + A G GK FF G+ VG VD+ LG Sbjct: 114 PAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYL 173 Query: 495 YVVPMYEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKDHPP 373 ++++G RL+ R P+L+AW RF + K P Sbjct: 174 GWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVP 214
>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)| (Pathogenesis-related protein 1) Length = 217 Score = 47.0 bits (110), Expect = 6e-05 Identities = 30/107 (28%), Positives = 50/107 (46%) Frame = -2 Query: 660 IWKWFTTAPGEDQEAARGASXXXXXXXXXXLAVGGKEFFAGESVGLVDLSLGAMAYVVPM 481 +WK F + GE+QE A+ + K+ F G+ G D+ A + + Sbjct: 107 VWKSFFSK-GEEQEKAKEEAYEMLKILDNEFK--DKKCFVGDKFGFADIVANGAALYLGI 163 Query: 480 YEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKDHPPPVERLIPRYRA 340 EE+ G+ L T E+FP+ AW + +++ P + L+ RYRA Sbjct: 164 LEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDELLIRYRA 208
>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)| Length = 224 Score = 46.6 bits (109), Expect = 7e-05 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = -2 Query: 558 GKEFFAGESVGLVDLSLGAMA-YVVPMYEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKD 382 GK++F G++VG +D G++ + + E +G+ ++TEE+FP W+ VKD Sbjct: 143 GKDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEEKFPEFKRWVRNLEKVEIVKD 202 Query: 381 HPPPVERLIPRYRAMRE 331 PP E + M E Sbjct: 203 CVPPREEHVEHMNYMAE 219
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 43.1 bits (100), Expect = 8e-04 Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = +2 Query: 398 EPKNRPIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNS 577 EP + I + LSS TS PT +S T + +PS STSP+ + +S T+S+S Sbjct: 159 EPSSASIISPVTSTLSSTTSSNPTTTSLSST--STSPSSTSTSPSSTSTSSSSTSTSSSS 216 Query: 578 SRTCSCSTE-APRAASWSS 631 + T S ST +P + S SS Sbjct: 217 TSTSSSSTSTSPSSTSTSS 235 Score = 33.9 bits (76), Expect = 0.49 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 1/64 (1%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTE-APRAA 619 SS TS + + +S ++ + +PS STS +L+ +S T+ +S+ T S ST +P + Sbjct: 207 SSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSST 266 Query: 620 SWSS 631 S SS Sbjct: 267 STSS 270 Score = 32.7 bits (73), Expect = 1.1 Identities = 18/65 (27%), Positives = 36/65 (55%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S TS + + +S ++ + + S STSP+ + +S T+S+S+ T ST +++ Sbjct: 201 SSTSTSSSSTSTSSSSTSTSSSSTSTSPSSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTS 260 Query: 626 SSPGA 640 +SP + Sbjct: 261 TSPSS 265 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 SS TS + + +S ++ + +PS STS + + S T+++S+ T S ST + + Sbjct: 242 SSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYSTSTSPSLT 301 Query: 623 WSSP 634 SSP Sbjct: 302 SSSP 305 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 SS+TS + + +S ++ + + S STSP+ + +S T+ +S T + ST ++ Sbjct: 235 SSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTSTSSYST 294 Query: 623 WSSP 634 +SP Sbjct: 295 STSP 298
>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)| (Auxin-induced protein PCNT107) Length = 221 Score = 40.8 bits (94), Expect = 0.004 Identities = 30/106 (28%), Positives = 44/106 (41%) Frame = -2 Query: 642 TAPGEDQEAARGASXXXXXXXXXXLAVGGKEFFAGESVGLVDLSLGAMAYVVPMYEEIVG 463 T GE+QEAA+ A+G K +F GES G VD++L + Y Y Sbjct: 117 TTKGEEQEAAK--KDFIECLKVLEGALGDKPYFGGESFGFVDIAL--IGYYSWFYAYETF 172 Query: 462 VRLVTEERFPSLSAWMGRFLGSPPVKDHPPPVERLIPRYRAMREAF 325 TE P AW R + V P +++ + +R+ F Sbjct: 173 GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218
>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)| (Auxin-regulated protein parC) Length = 221 Score = 36.6 bits (83), Expect = 0.075 Identities = 27/103 (26%), Positives = 43/103 (41%) Frame = -2 Query: 633 GEDQEAARGASXXXXXXXXXXLAVGGKEFFAGESVGLVDLSLGAMAYVVPMYEEIVGVRL 454 GE+QEAA+ A+G + +F GES G VD++L + + Y Sbjct: 120 GEEQEAAK--KDFIECLKVLEGALGDRPYFGGESFGFVDIAL--IGFYSWFYAYETFGNF 175 Query: 453 VTEERFPSLSAWMGRFLGSPPVKDHPPPVERLIPRYRAMREAF 325 TE P AW R + V P +++ + +R+ F Sbjct: 176 STEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKF 218
>RPB1_YEAST (P04050) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) (B220) Length = 1733 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ A +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1646 SYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSP 1705 Query: 626 SSPG 637 +SPG Sbjct: 1706 TSPG 1709 Score = 33.5 bits (75), Expect = 0.64 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + A S Sbjct: 1604 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSP 1663 Query: 626 SSP 634 +SP Sbjct: 1664 TSP 1666 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1611 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSP 1670 Query: 626 SSP 634 +SP Sbjct: 1671 TSP 1673 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT +Y T+ + +P+ S TSP+ SP S+ PT+ N S T + S Sbjct: 1653 SYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSP 1712 Query: 626 SSP 634 SP Sbjct: 1713 GSP 1715 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1597 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1656 Query: 626 SSP 634 +SP Sbjct: 1657 TSP 1659 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1590 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649 Query: 626 SSP 634 +SP Sbjct: 1650 TSP 1652 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1583 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1642 Query: 626 SSP 634 +SP Sbjct: 1643 TSP 1645 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1576 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1635 Query: 626 SSP 634 +SP Sbjct: 1636 TSP 1638 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1569 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1628 Query: 626 SSP 634 +SP Sbjct: 1629 TSP 1631 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1562 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1621 Query: 626 SSP 634 +SP Sbjct: 1622 TSP 1624 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP SP S+ PT+ + S T + + S Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691 Query: 626 SSP 634 +SP Sbjct: 1692 TSP 1694 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRA 616 S +PT +Y T+ A +P+ S TSP+ SP S+ PT+ + S T + + Sbjct: 1538 SSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1597 Query: 617 ASWSSP 634 S +SP Sbjct: 1598 YSPTSP 1603 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ + S T + + S Sbjct: 1625 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1684 Query: 626 SSP 634 +SP Sbjct: 1685 TSP 1687 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ S T + + S Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSP 1677 Query: 626 SSP 634 +SP Sbjct: 1678 TSP 1680
>VGP3_EBV (P03200) Envelope glycoprotein GP340/GP220 (Membrane antigen) (MA)| Length = 907 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 3/69 (4%) Frame = +2 Query: 425 DRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPT---LSPAKNSFPPTASNSSRTCSC 595 D + S VT+ TP +S T P+ +TSPT +P N+ PT +S T + Sbjct: 505 DMTSSTSPVTTPTPNATS--PTPAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAV 562 Query: 596 STEAPRAAS 622 +T P A S Sbjct: 563 TTPTPNATS 571 Score = 34.7 bits (78), Expect = 0.29 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 14/85 (16%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRSTSPTL----------SPAKNSFPPTASNSSRTCSCSTEAP 610 +PT+ T+ P+ +TSPTL +P N+ PT +S T + +T P Sbjct: 550 SPTLGKTSPTSAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTLGKTSPTSAVTTPTP 609 Query: 611 RA----ASWSSPGAVVNHFQIGGES 673 A +SP A + +GG S Sbjct: 610 NATGPTVGETSPQANATNHTLGGTS 634 Score = 32.3 bits (72), Expect = 1.4 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 10/64 (15%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRSTSPTL----------SPAKNSFPPTASNSSRTCSCSTEAP 610 TPT ++ T P+ +TSPTL +P N+ PT +S T + +T P Sbjct: 529 TPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTLGKTSPTSAVTTPTP 588 Query: 611 RAAS 622 A S Sbjct: 589 NATS 592
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 35.0 bits (79), Expect = 0.22 Identities = 21/72 (29%), Positives = 43/72 (59%) Frame = +2 Query: 416 IHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSC 595 ++ +G L + S + ++SS ++ + +PS ST+ T SP+ +S ++S+SS + S Sbjct: 115 VYLTGNGVLQTTVS-SSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSS 173 Query: 596 STEAPRAASWSS 631 S+ + ++S SS Sbjct: 174 SSSSSSSSSSSS 185
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ N S T T + S Sbjct: 202 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 261 Query: 626 SSP 634 +SP Sbjct: 262 TSP 264 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S Sbjct: 124 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 183 Query: 581 RTCSCSTEAPRAASWSSP 634 T + + S +SP Sbjct: 184 PTSPSYSPTSPSYSPTSP 201 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + + TPT SY T+ + +P+ + TSP SP S+ PT+ + S Sbjct: 236 PSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYS 295 Query: 581 RTC-SCSTEAPR 613 T S S +PR Sbjct: 296 PTSPSYSPSSPR 307 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 181 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 240 Query: 626 SSP 634 +SP Sbjct: 241 TSP 243 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 174 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 233 Query: 626 SSP 634 +SP Sbjct: 234 TSP 236 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 167 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 226 Query: 626 SSP 634 +SP Sbjct: 227 TSP 229 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 160 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 219 Query: 626 SSP 634 +SP Sbjct: 220 TSP 222 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 153 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 212 Query: 626 SSP 634 +SP Sbjct: 213 TSP 215 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 146 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 205 Query: 626 SSP 634 +SP Sbjct: 206 TSP 208 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ N + T + + S Sbjct: 209 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 268 Query: 626 SSP 634 +SP Sbjct: 269 TSP 271 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 118 SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 177 Query: 626 SSP 634 +SP Sbjct: 178 TSP 180 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ + TSP+ SP S+ PT+ + S T + + S Sbjct: 111 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 170 Query: 626 SSP 634 +SP Sbjct: 171 TSP 173 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSD---RSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +PS SPT +P+ S+ P++ + S T T + S Sbjct: 286 SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP 345 Query: 626 SSP 634 SSP Sbjct: 346 SSP 348 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT +Y T+ P+ S TSP+ SP ++ PT+ N S T + + S Sbjct: 237 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 296 Query: 626 SSP 634 +SP Sbjct: 297 TSP 299 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ + TSP+ SP S+ PT+ N + T + + S Sbjct: 230 SYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 289 Query: 626 SSP 634 +SP Sbjct: 290 TSP 292
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ N S T T + S Sbjct: 1705 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764 Query: 626 SSP 634 +SP Sbjct: 1765 TSP 1767 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686 Query: 581 RTCSCSTEAPRAASWSSP 634 T + + S +SP Sbjct: 1687 PTSPSYSPTSPSYSPTSP 1704 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + + TPT SY T+ + +P+ + TSP SP S+ PT+ + S Sbjct: 1739 PSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYS 1798 Query: 581 RTC-SCSTEAPR 613 T S S +PR Sbjct: 1799 PTSPSYSPSSPR 1810 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743 Query: 626 SSP 634 +SP Sbjct: 1744 TSP 1746 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736 Query: 626 SSP 634 +SP Sbjct: 1737 TSP 1739 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729 Query: 626 SSP 634 +SP Sbjct: 1730 TSP 1732 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722 Query: 626 SSP 634 +SP Sbjct: 1723 TSP 1725 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1715 Query: 626 SSP 634 +SP Sbjct: 1716 TSP 1718 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708 Query: 626 SSP 634 +SP Sbjct: 1709 TSP 1711 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ N + T + + S Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771 Query: 626 SSP 634 +SP Sbjct: 1772 TSP 1774 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1621 SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680 Query: 626 SSP 634 +SP Sbjct: 1681 TSP 1683 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ + TSP+ SP S+ PT+ + S T + + S Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673 Query: 626 SSP 634 +SP Sbjct: 1674 TSP 1676 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSD---RSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +PS SPT +P+ S+ P++ + S T T + S Sbjct: 1789 SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP 1848 Query: 626 SSP 634 SSP Sbjct: 1849 SSP 1851 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT +Y T+ P+ S TSP+ SP ++ PT+ N S T + + S Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799 Query: 626 SSP 634 +SP Sbjct: 1800 TSP 1802 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ + TSP+ SP S+ PT+ N + T + + S Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792 Query: 626 SSP 634 +SP Sbjct: 1793 TSP 1795
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 35.0 bits (79), Expect = 0.22 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ N S T T + S Sbjct: 1705 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSP 1764 Query: 626 SSP 634 +SP Sbjct: 1765 TSP 1767 Score = 32.7 bits (73), Expect = 1.1 Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S Sbjct: 1627 PSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1686 Query: 581 RTCSCSTEAPRAASWSSP 634 T + + S +SP Sbjct: 1687 PTSPSYSPTSPSYSPTSP 1704 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = +2 Query: 413 PIHADRDGNLSSVT-SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSS 580 P ++ N S + + TPT SY T+ + +P+ + TSP SP S+ PT+ + S Sbjct: 1739 PSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYS 1798 Query: 581 RTC-SCSTEAPR 613 T S S +PR Sbjct: 1799 PTSPSYSPSSPR 1810 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1684 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1743 Query: 626 SSP 634 +SP Sbjct: 1744 TSP 1746 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1677 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1736 Query: 626 SSP 634 +SP Sbjct: 1737 TSP 1739 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729 Query: 626 SSP 634 +SP Sbjct: 1730 TSP 1732 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1722 Query: 626 SSP 634 +SP Sbjct: 1723 TSP 1725 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1715 Query: 626 SSP 634 +SP Sbjct: 1716 TSP 1718 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708 Query: 626 SSP 634 +SP Sbjct: 1709 TSP 1711 Score = 32.0 bits (71), Expect = 1.9 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ N + T + + S Sbjct: 1712 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSP 1771 Query: 626 SSP 634 +SP Sbjct: 1772 TSP 1774 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1621 SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680 Query: 626 SSP 634 +SP Sbjct: 1681 TSP 1683 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ + TSP+ SP S+ PT+ + S T + + S Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673 Query: 626 SSP 634 +SP Sbjct: 1674 TSP 1676 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSD---RSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +PS SPT +P+ S+ P++ + S T T + S Sbjct: 1789 SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSP 1848 Query: 626 SSP 634 SSP Sbjct: 1849 SSP 1851 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT +Y T+ P+ S TSP+ SP ++ PT+ N S T + + S Sbjct: 1740 SYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSP 1799 Query: 626 SSP 634 +SP Sbjct: 1800 TSP 1802 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ + TSP+ SP S+ PT+ N + T + + S Sbjct: 1733 SYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792 Query: 626 SSP 634 +SP Sbjct: 1793 TSP 1795
>RPB1_ARATH (P18616) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1840 Score = 34.7 bits (78), Expect = 0.29 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSS 631 +PT +Y T+ A +P+ S TSP+ SP S+ PT+ + S T + A S +S Sbjct: 1644 SPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTS 1703 Query: 632 PG 637 PG Sbjct: 1704 PG 1705 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ S T + A S Sbjct: 1600 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSP 1659 Query: 626 SSP 634 +SP Sbjct: 1660 TSP 1662 Score = 32.7 bits (73), Expect = 1.1 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSS 631 +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + A S +S Sbjct: 1595 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTS 1654 Query: 632 P 634 P Sbjct: 1655 P 1655 Score = 32.0 bits (71), Expect = 1.9 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ A +P+ + TSP SP S+ PT+ + S T + + S Sbjct: 1628 SYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1687 Query: 626 SSP 634 +SP Sbjct: 1688 TSP 1690 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT +Y T+ A +P+ + TSP+ SP S+ PT+ + S T + + S Sbjct: 1635 SYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694 Query: 626 SSP 634 +SP Sbjct: 1695 TSP 1697 Score = 30.4 bits (67), Expect = 5.4 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ S T + + S Sbjct: 1607 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSP 1666 Query: 626 SSP 634 +SP Sbjct: 1667 TSP 1669 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/58 (34%), Positives = 28/58 (48%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSSP 634 +PT SY T+ PS TSP+ SP S+ PT+ + S T + S +SP Sbjct: 1658 SPTSPSYSPTS----PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSP 1711 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 3/47 (6%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRT 586 S +PT SY T+ + +P+ S TSP+ SP ++ PT+ S T Sbjct: 1663 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPT 1709 Score = 29.6 bits (65), Expect = 9.2 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP SP ++ PT+ S T + + S Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSP 1673 Query: 626 SSP 634 +SP Sbjct: 1674 TSP 1676
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 34.7 bits (78), Expect = 0.29 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = +2 Query: 443 SSVTSLT--PTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRA 616 S+VTS T PT +S + T + + S STS T+ +F TAS S+ + S +T+ + Sbjct: 288 STVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTS-TTQQSSS 346 Query: 617 ASWSSPGA 640 SSP + Sbjct: 347 TITSSPSS 354 Score = 30.0 bits (66), Expect = 7.1 Identities = 18/60 (30%), Positives = 32/60 (53%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 SS T TPT + T +PS T+ T +P+ ++ P++S+S+ + + S+ AS Sbjct: 468 SSTTVTTPTSTESTST----SPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTAS 523
>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor| Length = 317 Score = 34.7 bits (78), Expect = 0.29 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 6/72 (8%) Frame = +2 Query: 434 GNLSSVTSLTP------TISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSC 595 G +SS TS+ P T SSY T+ + PS S+S + SP+ +S +S+SS++ S Sbjct: 125 GTISS-TSIAPSMIGTRTSSSYFITSSSSTPSSSSSSSSSSPSSSS--SKSSSSSKSSSS 181 Query: 596 STEAPRAASWSS 631 S+ + +++S SS Sbjct: 182 SSSSSKSSSSSS 193
>RPB1_CAEBR (P35074) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1853 Score = 34.7 bits (78), Expect = 0.29 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Frame = +2 Query: 401 PKNRPIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTAS 571 P P G S +PT SY T+ + +P+ S TSP+ SP S+ PT+ Sbjct: 1597 PSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1656 Query: 572 NSSRTCSCSTEAPRAASWSSP 634 + S T + + S SSP Sbjct: 1657 SYSPTSPSYSPTSPSYSPSSP 1677 Score = 33.1 bits (74), Expect = 0.83 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTC-SCSTEAPR 613 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T S S +PR Sbjct: 1622 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPR 1678 Score = 32.0 bits (71), Expect = 1.9 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSD---RSTSPTLSPAKNSFPPTA---SNSSRTCSCSTEAPRA 616 S +PT SY T+ + +PS TSPT SP ++ PT+ S +S T S ++ + Sbjct: 1657 SYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYEG 1716 Query: 617 ASWSSP 634 S SSP Sbjct: 1717 YSPSSP 1722 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP+ + PT+ S T T +P + ++ Sbjct: 1643 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPT--SPTYSPTSPTY 1700 Query: 626 S 628 S Sbjct: 1701 S 1701 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ P++ S T T +P + ++ Sbjct: 1636 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPT--SPTYSPTSPTY 1693 Query: 626 S 628 S Sbjct: 1694 S 1694
>PO2F1_PIG (Q29076) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 745 Score = 34.7 bits (78), Expect = 0.29 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAP--SDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAA 619 SVT T T S+ T + AP S TSP+LSP+ P+AS S+ S ++E Sbjct: 495 SVTGTTDTTSNNTATVISTAPPASSAVTSPSLSPS-----PSASGSTSEVSSASETSTTQ 549 Query: 620 SWSSP 634 + S+P Sbjct: 550 TTSTP 554
>RPB1_DICDI (P35084) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (Fragment) Length = 902 Score = 33.9 bits (76), Expect = 0.49 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + + S Sbjct: 811 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSP 870 Query: 626 SSP 634 SSP Sbjct: 871 SSP 873 Score = 33.5 bits (75), Expect = 0.64 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 804 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 863 Query: 626 SSP 634 SSP Sbjct: 864 SSP 866 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S + + + + S Sbjct: 818 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSP 877 Query: 626 SSP 634 SSP Sbjct: 878 SSP 880 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 797 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 856 Query: 626 SSP 634 +SP Sbjct: 857 TSP 859 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 790 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 849 Query: 626 SSP 634 +SP Sbjct: 850 TSP 852 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 783 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 842 Query: 626 SSP 634 +SP Sbjct: 843 TSP 845 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 762 SYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 821 Query: 626 SSP 634 +SP Sbjct: 822 TSP 824 Score = 31.2 bits (69), Expect = 3.2 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRSTSPT---LSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S SPT SP S+ PT+ + S T + + S Sbjct: 748 SYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 807 Query: 626 SSP 634 +SP Sbjct: 808 TSP 810 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ P++ + S + + + + S Sbjct: 825 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSP 884 Query: 626 SSP 634 SSP Sbjct: 885 SSP 887 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSD---RSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ TSP+ SP S+ PT+ + S T + + S Sbjct: 755 SYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 814 Query: 626 SSP 634 +SP Sbjct: 815 TSP 817 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ S T + + S Sbjct: 734 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSP 793 Query: 626 SSP 634 +SP Sbjct: 794 TSP 796 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSS 631 +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S +S Sbjct: 729 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTS 788 Query: 632 P 634 P Sbjct: 789 P 789 Score = 30.0 bits (66), Expect = 7.1 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP + PT+ + S T + + S Sbjct: 741 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSP 800 Query: 626 SSP 634 +SP Sbjct: 801 TSP 803
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 33.9 bits (76), Expect = 0.49 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%) Frame = +2 Query: 401 PKNRPIHADRDGNLSSVTSLTPT--ISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASN 574 P+ +P+ G S V + P+ S + G++ ++PS S SPT SP K TA Sbjct: 1453 PREKPL----SGGDSEVGAPQPSRGYSYFTGSSPPLSPSTPSESPTFSPGKLGPRATAEF 1508 Query: 575 SSRTCS--CSTEAPRAASWSSP 634 S++T S S++ PR+ SP Sbjct: 1509 STQTPSLTLSSDIPRSPGPPSP 1530
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 33.9 bits (76), Expect = 0.49 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Frame = +2 Query: 473 SSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSC--STEAPRAASWSSP 634 S + G++ ++PS S SPT SP+K TA S++T S S++ PR+ SP Sbjct: 1463 SYFTGSSPPLSPSTPSESPTFSPSKLGPRATAEFSTQTPSLTPSSDIPRSVGTPSP 1518
>HMEN_DROVI (P09145) Segmentation polarity homeobox protein engrailed| Length = 584 Score = 33.5 bits (75), Expect = 0.64 Identities = 23/65 (35%), Positives = 36/65 (55%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 S++ SL T+S IG + P T+P+ P++ + PP ASN+S S S+ A ++ Sbjct: 331 SALGSLCKTVSQ-IGQAQSTTPV---TTPSSRPSQLASPPPASNASTISSSSSTAASCSA 386 Query: 623 WSSPG 637 SS G Sbjct: 387 SSSSG 391
>RPB1_SCHPO (P36594) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1752 Score = 33.1 bits (74), Expect = 0.83 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1598 SYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657 Query: 626 SSP 634 +SP Sbjct: 1658 TSP 1660 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1689 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1748 Query: 626 SSP 634 +SP Sbjct: 1749 TSP 1751 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1682 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1741 Query: 626 SSP 634 +SP Sbjct: 1742 TSP 1744 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1675 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1734 Query: 626 SSP 634 +SP Sbjct: 1735 TSP 1737 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1668 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1727 Query: 626 SSP 634 +SP Sbjct: 1728 TSP 1730 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1720 Query: 626 SSP 634 +SP Sbjct: 1721 TSP 1723 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713 Query: 626 SSP 634 +SP Sbjct: 1714 TSP 1716 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1647 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1706 Query: 626 SSP 634 +SP Sbjct: 1707 TSP 1709 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1640 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699 Query: 626 SSP 634 +SP Sbjct: 1700 TSP 1702 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1633 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1692 Query: 626 SSP 634 +SP Sbjct: 1693 TSP 1695 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1626 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1685 Query: 626 SSP 634 +SP Sbjct: 1686 TSP 1688 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1619 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1678 Query: 626 SSP 634 +SP Sbjct: 1679 TSP 1681 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1612 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1671 Query: 626 SSP 634 +SP Sbjct: 1672 TSP 1674 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTT---YAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ A +PS TSP+ SP S+ PT+ + S T + + S Sbjct: 1591 SYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650 Query: 626 SSP 634 +SP Sbjct: 1651 TSP 1653 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1584 SYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1643 Query: 626 SSP 634 +SP Sbjct: 1644 TSP 1646 Score = 30.4 bits (67), Expect = 5.4 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +2 Query: 413 PIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSR 583 P ++ + S S +PT SY T+ + +P+ S TSP+ S S+ PT+ + S Sbjct: 1563 PGYSTSPAYMPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSP 1622 Query: 584 TCSCSTEAPRAASWSSP 634 T + + S +SP Sbjct: 1623 TSPSYSPTSPSYSPTSP 1639 Score = 30.0 bits (66), Expect = 7.1 Identities = 21/74 (28%), Positives = 34/74 (45%) Frame = +2 Query: 413 PIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS 592 P ++ S+ + P+ SY T+ PS TSP+ SP S+ PT+ + S T Sbjct: 1556 PSYSPSSPGYSTSPAYMPSSPSYSPTS----PSYSPTSPSYSPTSPSYSPTSPSYSATSP 1611 Query: 593 CSTEAPRAASWSSP 634 + + S +SP Sbjct: 1612 SYSPTSPSYSPTSP 1625
>RPB1_ASHGO (Q75A34) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1745 Score = 33.1 bits (74), Expect = 0.83 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T +PR+ S+ Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT--SPQYSPRSPSY 1727 Query: 626 S 628 S Sbjct: 1728 S 1728 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1715 Query: 626 SSP 634 +SP Sbjct: 1716 TSP 1718 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708 Query: 626 SSP 634 +SP Sbjct: 1709 TSP 1711 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1642 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1701 Query: 626 SSP 634 +SP Sbjct: 1702 TSP 1704 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1635 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694 Query: 626 SSP 634 +SP Sbjct: 1695 TSP 1697 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1628 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1687 Query: 626 SSP 634 +SP Sbjct: 1688 TSP 1690 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1621 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1680 Query: 626 SSP 634 +SP Sbjct: 1681 TSP 1683 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1614 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1673 Query: 626 SSP 634 +SP Sbjct: 1674 TSP 1676 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1607 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1666 Query: 626 SSP 634 +SP Sbjct: 1667 TSP 1669 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1600 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1659 Query: 626 SSP 634 +SP Sbjct: 1660 TSP 1662 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1593 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1652 Query: 626 SSP 634 +SP Sbjct: 1653 TSP 1655 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1586 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1645 Query: 626 SSP 634 +SP Sbjct: 1646 TSP 1648 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1579 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1638 Query: 626 SSP 634 +SP Sbjct: 1639 TSP 1641 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1572 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1631 Query: 626 SSP 634 +SP Sbjct: 1632 TSP 1634 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1565 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1624 Query: 626 SSP 634 +SP Sbjct: 1625 TSP 1627 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1558 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1617 Query: 626 SSP 634 +SP Sbjct: 1618 TSP 1620 Score = 30.0 bits (66), Expect = 7.1 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = +2 Query: 434 GNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPR 613 G++SS +PT +Y T+ PS TSP+ SP S+ PT+ + S T + Sbjct: 1538 GDVSS-PGFSPTSPAYSPTS----PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1592 Query: 614 AASWSSP 634 + S +SP Sbjct: 1593 SYSPTSP 1599
>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RNA polymerase II subunit 1) Length = 1599 Score = 33.1 bits (74), Expect = 0.83 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +2 Query: 413 PIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSR 583 P H + + L+PT SY T+ + +P+ S TSP+ SP S+ PT+ + S Sbjct: 1451 PTHLEMAYSRDLGERLSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1510 Query: 584 TCSCSTEAPRAASWSSP 634 T + + S +SP Sbjct: 1511 TSPSYSPTSPSYSPTSP 1527 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1507 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1566 Query: 626 SSPGAVVN 649 +SP V+ Sbjct: 1567 TSPSYSVS 1574 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1500 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1559 Query: 626 SSP 634 +SP Sbjct: 1560 TSP 1562 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1493 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1552 Query: 626 SSP 634 +SP Sbjct: 1553 TSP 1555 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1486 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1545 Query: 626 SSP 634 +SP Sbjct: 1546 TSP 1548 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1479 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1538 Query: 626 SSP 634 +SP Sbjct: 1539 TSP 1541 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S T + + S Sbjct: 1472 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1531 Query: 626 SSP 634 +SP Sbjct: 1532 TSP 1534 Score = 30.4 bits (67), Expect = 5.4 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCS 592 S +PT SY T+ + +P+ S TSP+ SP S+ PT+ + S + S Sbjct: 1528 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSVSMS 1576
>PO2F1_CHICK (P15143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 739 Score = 33.1 bits (74), Expect = 0.83 Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 2/65 (3%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAP--SDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAA 619 SVT T T S+ T + AP S TSP+LSP+ P+AS S S ++E Sbjct: 489 SVTGTTETTSNNTATVISTAPPASSAVTSPSLSPS-----PSASASISEASSASETSTTQ 543 Query: 620 SWSSP 634 + S+P Sbjct: 544 TTSTP 548
>PO2F1_HUMAN (P14859) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) Length = 743 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAP--SDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAA 619 SVT + T S+ T + AP S TSP+LSP+ P+AS S+ S ++E Sbjct: 493 SVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPS-----PSASASTSEASSASETSTTQ 547 Query: 620 SWSSP 634 + S+P Sbjct: 548 TTSTP 552
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 32.7 bits (73), Expect = 1.1 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = +2 Query: 398 EPKNRPIHADRDGNLSSVTSLTPTISSYIGTTYA--IAPSDRSTSPTLSPAKNSFPPTAS 571 +P + P L+S S T +S+I +T + +P+ +TSPT SP ++ PT S Sbjct: 1404 QPTSSPTTLPTTSPLTS--SATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPTTS 1461 Query: 572 NSSRTCSCST 601 +S T S +T Sbjct: 1462 TTSPTPSPTT 1471 Score = 30.4 bits (67), Expect = 5.4 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 4/68 (5%) Frame = +2 Query: 443 SSVTSLT--PTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS--CSTEAP 610 +S TS T PT S+ TT +P+ T+ T SP + PT S +S T S ST +P Sbjct: 1442 TSTTSPTTSPTTSTTSPTTSTTSPTPSPTTSTTSPTPS---PTTSTTSPTPSPTTSTTSP 1498 Query: 611 RAASWSSP 634 + +SP Sbjct: 1499 TTSPITSP 1506
>RPB1_CAEEL (P16356) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1852 Score = 32.7 bits (73), Expect = 1.1 Identities = 22/60 (36%), Positives = 31/60 (51%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSSP 634 S +PT SY T+ PS TSP+ SP S+ PT+ + S T + + + S SSP Sbjct: 1611 SYSPTSPSYSPTS----PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1666 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 10/71 (14%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS----------TSPTLSPAKNSFPPTASNSSRTCSCSTE 604 S +PT SY ++ + +PS S TSPT SP ++ PT+ S T T Sbjct: 1646 SYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPT--SPTY 1703 Query: 605 APRAASWSSPG 637 +P + S+ S G Sbjct: 1704 SPTSPSYESGG 1714 Score = 31.6 bits (70), Expect = 2.4 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +2 Query: 461 TPTISSYIGTTYA-----IAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 +PT SY T+ A ++PS TSP+ SP S+ PT+ + S T + + S Sbjct: 1590 SPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1649 Query: 626 SSP 634 +SP Sbjct: 1650 TSP 1652 Score = 30.8 bits (68), Expect = 4.1 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTA-SNSSRTCSCSTEAPR 613 S +PT SY T+ + +P+ S TSP+ SP S+ P++ S S + S S +PR Sbjct: 1618 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPR 1674 Score = 29.6 bits (65), Expect = 9.2 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASW 625 S +PT SY T+ + +PS S +SP+ SP+ + PT+ S T T +P + ++ Sbjct: 1639 SYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPT--SPTYSPTSPTY 1696 Query: 626 S 628 S Sbjct: 1697 S 1697
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/95 (23%), Positives = 40/95 (42%) Frame = +2 Query: 413 PIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS 592 P G++SS +S SS+ GT+ + S+ T+ T + P + + T + Sbjct: 519 PTTVSTSGSVSSFSSSPSPTSSFSGTSALSSSSNEETTTTTQVTYTTSPEETTTTMTTTT 578 Query: 593 CSTEAPRAASWSSPGAVVNHFQIGGESFVVHKPHP 697 CS+ S S + V+ + G S + +P Sbjct: 579 CSSRPEETISTVSTTSTVS--ESGSSSASITSTYP 611
>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) (ARM-1) Length = 407 Score = 32.3 bits (72), Expect = 1.4 Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +2 Query: 434 GNLSSVTSLT-PTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAP 610 G L + +LT P ++S +G++ A S S+S + S A P++S SS + + AP Sbjct: 178 GGLGGLGALTGPGLASLLGSSGPPASSSSSSSRSQSAAVT---PSSSTSSARATPAPSAP 234 Query: 611 RAASWSSP 634 AAS +SP Sbjct: 235 AAASATSP 242
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Frame = +2 Query: 443 SSVTSLTPTISSYIGT-TYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCST 601 +S TS TPT S+ T T + AP+ +TS T + + S PT S +S T S S+ Sbjct: 251 TSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSS 304
>FLO5_YEAST (P38894) Flocculation protein FLO5 precursor (Flocculin-5)| Length = 1075 Score = 32.3 bits (72), Expect = 1.4 Identities = 21/63 (33%), Positives = 35/63 (55%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 SSVTS T SS+I ++ + + STS + +S PT+S++S + T + ++S Sbjct: 675 SSVTSSLVTSSSFISSSVISSSTTTSTSIFSESSTSSVIPTSSSTSGSSESKTSSASSSS 734 Query: 623 WSS 631 SS Sbjct: 735 SSS 737
>CAAL2_STRAW (Q82PC4) Carboxylate-amine ligase SAV999 (EC 6.3.-.-)| Length = 366 Score = 31.6 bits (70), Expect = 2.4 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 402 GSPPVKDHPPPVERLIPRYRAMR 334 G+PP+K+ PP PRYRAMR Sbjct: 92 GTPPIKEESPPPLTNNPRYRAMR 114
>PO2F1_RAT (P31503) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (Fragment) Length = 632 Score = 31.6 bits (70), Expect = 2.4 Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 2/65 (3%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAP--SDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAA 619 S+T T + S+ T + AP S TSP+LSP+ P+AS S+ S ++E Sbjct: 382 SLTGTTDSTSNNTATVISTAPPASSAVTSPSLSPS-----PSASASTSEASSASETSTTQ 436 Query: 620 SWSSP 634 + S+P Sbjct: 437 TTSTP 441
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 31.6 bits (70), Expect = 2.4 Identities = 23/73 (31%), Positives = 34/73 (46%) Frame = +2 Query: 473 SSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSSPGAVVNH 652 S + ++ ++PS S SPT SP K TA S++T S AP + SPGA Sbjct: 1470 SYFASSSPPLSPSSPSESPTFSPGKMGPRATAEFSTQTPS---PAPASDMPRSPGAPTPS 1526 Query: 653 FQIGGESFVVHKP 691 + + H+P Sbjct: 1527 PMVAQGTQTPHRP 1539
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 425 DRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTL---SPAKNSFPPTASNSSRTCSC 595 D S+VT+ TP +S T P+ +TSPTL SP PT + +S T + Sbjct: 505 DMTSPTSAVTTPTPNATS--PTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAV 562 Query: 596 STEAPRA 616 +T P A Sbjct: 563 TTPTPNA 569 Score = 30.0 bits (66), Expect = 7.1 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS----WS 628 +PT + T A +P+ T+PT N+ PT +S T + +T P A S + Sbjct: 543 SPTSAVTTPTPNATSPTPAVTTPT----PNATIPTLGKTSPTSAVTTPTPNATSPTVGET 598 Query: 629 SPGAVVNHFQIGGES 673 SP A + +GG S Sbjct: 599 SPQANTTNHTLGGTS 613
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 425 DRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTL---SPAKNSFPPTASNSSRTCSC 595 D S+VT+ TP +S T P+ +TSPTL SP PT + +S T + Sbjct: 505 DMTSPTSAVTTPTPNATS--PTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTPAV 562 Query: 596 STEAPRA 616 +T P A Sbjct: 563 TTPTPNA 569 Score = 30.0 bits (66), Expect = 7.1 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%) Frame = +2 Query: 461 TPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS----WS 628 +PT + T A +P+ T+PT N+ PT +S T + +T P A S + Sbjct: 543 SPTSAVTTPTPNATSPTPAVTTPT----PNATIPTLGKTSPTSAVTTPTPNATSPTVGET 598 Query: 629 SPGAVVNHFQIGGES 673 SP A + +GG S Sbjct: 599 SPQANTTNHTLGGTS 613
>FLO9_YEAST (P39712) Flocculation protein FLO9 precursor| Length = 1322 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLS----PAKNSFPPTASNSSRTCSCSTEAP 610 SSVTS T S I +++ +P ST+ + S +K+S PT+S++S + T + Sbjct: 910 SSVTSSLVTSSPVISSSFISSPVISSTTTSASILSESSKSSVIPTSSSTSGSSESETGSA 969 Query: 611 RAASWSS 631 +AS SS Sbjct: 970 SSASSSS 976
>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 31.2 bits (69), Expect = 3.2 Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Frame = +2 Query: 434 GNLSSVTSLT-PTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAP 610 G L + +LT P ++S +G++ A S S+S + S A P+++ SS + + AP Sbjct: 178 GGLGGLGALTGPGLASLLGSSGPPASSSSSSSRSQSAAVT---PSSTTSSARATPAPSAP 234 Query: 611 RAASWSSP 634 AAS +SP Sbjct: 235 AAASATSP 242
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 31.2 bits (69), Expect = 3.2 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 S+ TS+TP SS +GTT + + T+S S P +++S + +S Sbjct: 4260 STATSVTPIPSSTLGTTGTLPEQTTTPVATMSTIHPSSTPETTHTSTVLTTKATTRATSS 4319 Query: 623 WSSPGA 640 S+P + Sbjct: 4320 TSTPSS 4325 Score = 31.2 bits (69), Expect = 3.2 Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +2 Query: 446 SVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPA-KNSFPPTASNSSRTCSCSTEAPRAAS 622 + TS+TP SS +GTT+ + + T+S A +S P TA S+ + +T S Sbjct: 2505 TATSVTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGS 2564 Query: 623 WSSPGA 640 ++P + Sbjct: 2565 VATPSS 2570 Score = 30.0 bits (66), Expect = 7.1 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAA- 619 S+ TS TP SS + TT+ + + T+S S P +++S + + RA Sbjct: 4686 STATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVLTTTATMTRATN 4745 Query: 620 SWSSPGAVVNHFQI 661 S ++P + + +I Sbjct: 4746 STATPSSTLGTTRI 4759 Score = 30.0 bits (66), Expect = 7.1 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 4/99 (4%) Frame = +2 Query: 410 RPIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPP----TASNS 577 +P+ SS T + T S I T I + +T+P+ +P PP TA+ Sbjct: 3866 QPVATGSMATPSSSTQTSGTPPSLITTATTITATGSTTNPSSTPGTTPIPPELTTTATTP 3925 Query: 578 SRTCSCSTEAPRAASWSSPGAVVNHFQIGGESFVVHKPH 694 + T S T + + +P G S PH Sbjct: 3926 AATSSTVTPSSALGTTHTPPVPNTTATTHGRSLSPSSPH 3964
>KLF12_MOUSE (O35738) Krueppel-like factor 12 (Transcriptional repressor| AP-2rep) Length = 402 Score = 30.8 bits (68), Expect = 4.1 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +2 Query: 452 TSLTPTISSYIGTT-YAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWS 628 TS T SS + T A +PS STS + S S P ++ SR S ST Sbjct: 91 TSPTAASSSPVSMTGSASSPSSTSTSSSSSSRPASSPTVITSVSRASSSSTVL------- 143 Query: 629 SPGAVV-NHFQIGGESFVVHKPHP 697 SPG +V + +GG+ F +H HP Sbjct: 144 SPGPLVASASGVGGQQF-LHIIHP 166
>SCW11_YEAST (P53189) Probable family 17 glucosidase SCW11 precursor (EC| 3.2.1.-) (Soluble cell wall protein 11) Length = 542 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/77 (25%), Positives = 38/77 (49%) Frame = +2 Query: 398 EPKNRPIHADRDGNLSSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNS 577 E N P + + SS TS + + S+ T+ + + STS + S + + T+ S Sbjct: 214 ESTNTPTSSSTSSSTSSSTSSSTSSSTSSSTS---SSTSSSTSSSTSSTQETAATTSEGS 270 Query: 578 SRTCSCSTEAPRAASWS 628 S + + T +P+A ++S Sbjct: 271 SSSSAAITSSPKAIAYS 287
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)| Length = 881 Score = 30.8 bits (68), Expect = 4.1 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS--CSTEAPRA 616 SSVT+ T SS + ++ A + + ++S S + S PT+S ++ + S S+ A + Sbjct: 249 SSVTTSYATSSSTVVSSDATSSTTTTSSVATSSSTTSSDPTSSTAAASSSDPASSSAAAS 308 Query: 617 ASWSSPGAVVNHFQIGGESFVVHKP 691 +S S+ A + I S +V P Sbjct: 309 SSASTENAASSSSAISSSSSMVSAP 333
>MAGL2_MOUSE (Q9QZ04) MAGE-like protein 2 (Protein nS7)| Length = 490 Score = 30.4 bits (67), Expect = 5.4 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +2 Query: 476 SYIGTTYAIAPSDRSTSPTLS---PAKNSFPPTASNSSRTCSCSTEAPRA 616 +Y+ T + P+ T P S P+ + F P +SN+ R S ++E+P++ Sbjct: 18 AYVPTAWKNLPATSETFPATSRVFPSTSHFQPASSNAFRGPSAASESPKS 67
>FTSK_ECOLI (P46889) DNA translocase ftsK| Length = 1329 Score = 30.4 bits (67), Expect = 5.4 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = +1 Query: 394 RRAQEPPHPRRQRRKPLLGDQPHADDLLVHRDHVRHRAERQVHEPNA-LPGEELL 555 ++ Q+P P++Q ++P P D L+H +R+ R +H+P LP +LL Sbjct: 792 QQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLL 846
>CRTS1_ONCHC (Q52QW3) Carotenoid isomerase 1, chloroplast precursor (EC 5.-.-.-)| (CrtISO1) (OcrtISO22) Length = 587 Score = 30.0 bits (66), Expect = 7.1 Identities = 18/44 (40%), Positives = 23/44 (52%) Frame = +2 Query: 518 STSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSSPGAVVN 649 STSP SP +SF S S CS + + WSSP AV++ Sbjct: 10 STSPPKSPLHHSFS-RRSMRSWVCSPRVQRKKLGFWSSPKAVLS 52
>RPB1_DROME (P04052) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 1887 Score = 30.0 bits (66), Expect = 7.1 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Frame = +2 Query: 455 SLTPTISSYIGTTYAIAPSDRS---TSPTLSPAKNSFPPTASNSSRTCSCSTEAP 610 S +P+ SY T+ +P+ S TSP +P S+ PT+ N S + S +P Sbjct: 1691 SYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASP 1745
>SSRP_MYCTU (P0A612) SsrA-binding protein| Length = 160 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRR 399 WL AH+ + + HGS ++P R+++LHRR+ Sbjct: 62 WLRNAHIPE-YRHGSWTNHEPRRNRKLLLHRRQ 93
>SSRP_MYCBO (P0A613) SsrA-binding protein| Length = 160 Score = 30.0 bits (66), Expect = 7.1 Identities = 13/33 (39%), Positives = 22/33 (66%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRR 399 WL AH+ + + HGS ++P R+++LHRR+ Sbjct: 62 WLRNAHIPE-YRHGSWTNHEPRRNRKLLLHRRQ 93
>REQU_MOUSE (Q61103) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) (D4, zinc and double PHD fingers family 2) Length = 391 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRRAQEPPHPR 423 W++ H G A G + Y WR+ +RRA P PR Sbjct: 56 WMEKRHRGPGLASGQLYSYPARRWRK----KRRAHPPEDPR 92
>REQU_HUMAN (Q92785) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) (D4, zinc and double PHD fingers family 2) Length = 391 Score = 30.0 bits (66), Expect = 7.1 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRRAQEPPHPR 423 W++ H G A G + Y WR+ +RRA P PR Sbjct: 56 WMEKRHRGPGLASGQLYSYPARRWRK----KRRAHPPEDPR 92
>Y4XL_RHISN (P55704) Hypothetical protein y4xL| Length = 338 Score = 27.3 bits (59), Expect(2) = 7.2 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRRAQEPPHPRRQR--RKPLLGDQPHADD 471 +LD H + + P P W+ L+ R + PHP QR + L G H D Sbjct: 54 YLDTRHPYSQYLDSAYPYPSPCEWQH-DLYTRTRERSPHPSEQRPHARVLQGAPEHDQD 111 Score = 21.2 bits (43), Expect(2) = 7.2 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 506 PSDRSTSPTLSPAKNSFPPTASN 574 PS SP+ +P S PP A++ Sbjct: 133 PSQAGLSPSATPLNPSPPPHATD 155
>SYNPO_MOUSE (Q8CC35) Synaptopodin| Length = 929 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/50 (42%), Positives = 29/50 (58%) Frame = +2 Query: 494 YAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWSSPGAV 643 Y + PS + SP PAK S + + SSRT S T +PRAAS + P ++ Sbjct: 795 YQMRPSLYALSPVKEPAKAS---SRATSSRTPS-RTVSPRAASPAKPSSL 840
>MIER1_PONPY (Q5REE1) Mesoderm induction early response protein 1 (Mi-er1)| Length = 512 Score = 29.6 bits (65), Expect = 9.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +2 Query: 488 TTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS------CSTEAPRAASWSSPGAVVN 649 T Y D S S S A + PPTASNSS + S ST S + PG ++N Sbjct: 357 TDYMDRLLDESESAASSRAPSP-PPTASNSSNSQSEKEDGTVSTTNQNGVSSNGPGEILN 415 Query: 650 HFQIGGESFVVHKP 691 ++ E ++ P Sbjct: 416 KEEVKVEGLHINGP 429
>GSTA_PLEPL (P30568) Glutathione S-transferase A (EC 2.5.1.18) (GST-A) (GST| class-theta) Length = 225 Score = 29.6 bits (65), Expect = 9.2 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%) Frame = -2 Query: 549 FFAGESVGLVDLSL-GAMAYVVPMYEEIVGVRLVTEERFPSLSAWMGRFLGSPPVKDHPP 373 F AG+S L D+S+ +AY+ +TEER+P L+A+ P +K P Sbjct: 158 FVAGKSFSLADVSVFPGVAYLFRFG--------LTEERYPQLTAYYNSLKERPSIKASWP 209 Query: 372 P 370 P Sbjct: 210 P 210
>FLO1_YEAST (P32768) Flocculation protein FLO1 precursor (Flocculin-1)| Length = 1537 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/63 (33%), Positives = 33/63 (52%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 SSVTS T S I ++ + + STS +K+S PT+S++S + T + + S Sbjct: 1126 SSVTSSLFTSSPVISSSVISSSTTTSTSIFSESSKSSVIPTSSSTSGSSESETSSAGSVS 1185 Query: 623 WSS 631 SS Sbjct: 1186 SSS 1188
>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell| membrane glycoprotein) (Gp110) Length = 407 Score = 29.6 bits (65), Expect = 9.2 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Frame = +2 Query: 434 GNLSSVTSLT-PTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAP 610 G L + +LT P ++S +G++ S S+S + S A P+++ SS + + AP Sbjct: 178 GGLGGLGALTGPGLASLLGSSGPPGSSSSSSSRSQSAAVT---PSSTTSSTRATPAPSAP 234 Query: 611 RAASWSSP 634 AAS +SP Sbjct: 235 AAASATSP 242
>WSC4_YEAST (P38739) Cell wall integrity and stress response component 4| precursor Length = 605 Score = 29.6 bits (65), Expect = 9.2 Identities = 17/62 (27%), Positives = 34/62 (54%) Frame = +2 Query: 449 VTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAASWS 628 +++ T + SS TT + AP ST+ + S + ++ PT+S++ + S +T + + Sbjct: 231 ISTSTSSSSSSTPTTTSSAPISTSTTSSTSTSTSTTSPTSSSAPTSSSNTTPTSTTFTTT 290 Query: 629 SP 634 SP Sbjct: 291 SP 292
>SAMD6_RAT (P0C0T2) Sterile alpha motif domain-containing protein 6| (Polycystic kidney disease protein 1) (SamCystin) Length = 871 Score = 29.6 bits (65), Expect = 9.2 Identities = 21/75 (28%), Positives = 38/75 (50%) Frame = +2 Query: 443 SSVTSLTPTISSYIGTTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCSCSTEAPRAAS 622 S+VTS + + + + +STSPTL+P+ + TA SS + S S +++ Sbjct: 707 SNVTSSSKKLDPGKRPPSGTSATSKSTSPTLTPSPSPKGHTA-ESSVSSSSSHRQSKSSG 765 Query: 623 WSSPGAVVNHFQIGG 667 SS G + + ++ G Sbjct: 766 GSSSGTITDEDELTG 780
>MIER1_HUMAN (Q8N108) Mesoderm induction early response protein 1 (Mi-er1)| (hmi-er1) (Early response 1) (Er1) Length = 536 Score = 29.6 bits (65), Expect = 9.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Frame = +2 Query: 488 TTYAIAPSDRSTSPTLSPAKNSFPPTASNSSRTCS------CSTEAPRAASWSSPGAVVN 649 T Y D S S S A + PPTASNSS + S ST S + PG ++N Sbjct: 381 TDYMDRLLDESESAASSRAPSP-PPTASNSSNSQSEKEDGTVSTANQNGVSSNGPGEILN 439 Query: 650 HFQIGGESFVVHKP 691 ++ E ++ P Sbjct: 440 KEEVKVEGLHINGP 453
>REQU_CHICK (P58268) Zinc-finger protein ubi-d4 (Requiem) (Apoptosis response| zinc finger protein) Length = 405 Score = 29.6 bits (65), Expect = 9.2 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 301 WLDLAHLQKGFAHGSVPGYQPLHWRRVILHRRRAQEPPHPR 423 W++ H G A G + Y WR+ +RRA P PR Sbjct: 56 WMEKRHRGPGLAAGQLYSYPARRWRK----KRRAHPPEDPR 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79,754,077 Number of Sequences: 219361 Number of extensions: 1531806 Number of successful extensions: 6029 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 5055 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5691 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6969622431 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
