>gb|AC117693.9| Mus musculus chromosome 1, clone RP23-448D22, complete sequence
          Length = 193386

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     ctttcacatgctaatncatatccag 59
              ||||||||||||||| |||||||||
Sbjct: 125249 ctttcacatgctaatgcatatccag 125225

>gb|AC110909.10| Mus musculus chromosome 7, clone RP24-186G5, complete sequence
          Length = 161738

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   gaggtctctccaaggcaacc 301
             ||||||||||||||||||||
Sbjct: 12633 gaggtctctccaaggcaacc 12652

>gb|AC149779.3| Bos taurus  BAC CH240-5F6 (Children's Hospital Oakland Research Institute
              Bovine BAC Library (male)) complete sequence
          Length = 181013

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      tgtaacagcttacaaatata 23
              ||||||||||||||||||||
Sbjct: 102105 tgtaacagcttacaaatata 102086

>gb|AC165244.2| Mus musculus BAC clone RP24-498C9 from chromosome 14, complete
            sequence
          Length = 191747

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 273  ttcatgttggaggtctctcc 292
            ||||||||||||||||||||
Sbjct: 8807 ttcatgttggaggtctctcc 8788

>gb|AC132315.4| Mus musculus BAC clone RP24-234J3 from chromosome 12, complete sequence
          Length = 181828

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    tatccagctcagacctctag 72
             ||||||||||||||||||||
Sbjct: 37051 tatccagctcagacctctag 37070

>gb|AC156033.6| Mus musculus BAC clone RP23-377G8 from chromosome 12, complete
            sequence
          Length = 216718

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   tatccagctcagacctctag 72
            ||||||||||||||||||||
Sbjct: 4393 tatccagctcagacctctag 4374

>gb|AC142245.14| Mus musculus chromosome 15, clone RP23-82J20, complete sequence
          Length = 242954

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tgtttattgttcatgttgga 283
             ||||||||||||||||||||
Sbjct: 66065 tgtttattgttcatgttgga 66046

>gb|AC005948.14| Homo sapiens chromosome 13 clone 460f10 map 13q14, complete sequence
          Length = 154065

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 252    ggtaaagngttgtgtttattgttcatg 278
              ||||||| | |||||||||||||||||
Sbjct: 125690 ggtaaagaggtgtgtttattgttcatg 125664

>emb|BX469891.9| Zebrafish DNA sequence from clone CH211-226B21 in linkage group 2,
             complete sequence
          Length = 175261

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   ttgtgtttattgttcatgtt 280
             ||||||||||||||||||||
Sbjct: 40150 ttgtgtttattgttcatgtt 40131

>gb|AC114988.21| Mus musculus chromosome 7, clone RP23-207N5, complete sequence
          Length = 196013

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    gaggtctctccaaggcaacc 301
              ||||||||||||||||||||
Sbjct: 189427 gaggtctctccaaggcaacc 189446


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,106,319
Number of Sequences: 3902068
Number of extensions: 2106319
Number of successful extensions: 36182
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36168
Number of HSP's gapped (non-prelim): 14
length of query: 321
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 299
effective length of database: 17,147,199,772
effective search space: 5127012731828
effective search space used: 5127012731828
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)