ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1m13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473246.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 636 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 577 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 576 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 517 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 516 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 457 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 456 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 397 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 396 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 337 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 336 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 277 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 276 cacgccgcctgcctggaggattctcgcgcc 247
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 97648 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 97707 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 97708 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 97767 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 97768 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 97827 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 97828 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 97887 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 97888 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 97947 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 97948 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 98007 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 98008 cacgccgcctgcctggaggattctcgcgcc 98037 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 327 cctcctcagcgggacggccaccttgtacggcacacgcaccgtgtcgcccttgggcgaggt 386 |||||| |||||||| |||||||||| ||||| ||| | ||||||||||| |||||| Sbjct: 92902 cctcctgagcgggaccaccaccttgtagggcacccgcgcgacgtcgcccttggccgaggt 92961 Query: 387 cagctccagcgaccggtcgctgcggaaggccaccctctccgacgatacgaagagcactcc 446 | | | || |||||||||||||||||| ||| ||| | || |||||||||| || Sbjct: 92962 gaccgtgaccggccggtcgctgcggaaggcgaccttcttggtggagacgaagagcatccc 93021 Query: 447 ggcgatcggtccggcggtggtggacaggtagcactgc 483 |||||| || ||| |||||||| |||||||||||||| Sbjct: 93022 ggcgatgggcccgccggtggtgtacaggtagcactgc 93058 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtc 257 ||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 92791 ctggtagctcacgaaccccatgaaccagaactcgaagccgtc 92832 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ccaaaaacgacaagcaatccacca 37 ||||||||| |||||||||||||| Sbjct: 97496 ccaaaaacgccaagcaatccacca 97519
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 26321071 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 26321130 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 26321131 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 26321190 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 26321191 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 26321250 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 26321251 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 26321310 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 26321311 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 26321370 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 26321371 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 26321430 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 26321431 cacgccgcctgcctggaggattctcgcgcc 26321460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 327 cctcctcagcgggacggccaccttgtacggcacacgcaccgtgtcgcccttgggcgaggt 386 |||||| |||||||| |||||||||| ||||| ||| | ||||||||||| |||||| Sbjct: 26316325 cctcctgagcgggaccaccaccttgtagggcacccgcgcgacgtcgcccttggccgaggt 26316384 Query: 387 cagctccagcgaccggtcgctgcggaaggccaccctctccgacgatacgaagagcactcc 446 | | | || |||||||||||||||||| ||| ||| | || |||||||||| || Sbjct: 26316385 gaccgtgaccggccggtcgctgcggaaggcgaccttcttggtggagacgaagagcatccc 26316444 Query: 447 ggcgatcggtccggcggtggtggacaggtagcactgc 483 |||||| || ||| |||||||| |||||||||||||| Sbjct: 26316445 ggcgatgggcccgccggtggtgtacaggtagcactgc 26316481 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtc 257 ||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 26316214 ctggtagctcacgaaccccatgaaccagaactcgaagccgtc 26316255 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 ccaaaaacgacaagcaatccacca 37 ||||||||| |||||||||||||| Sbjct: 26320919 ccaaaaacgccaagcaatccacca 26320942
>dbj|AK104433.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-C06, full insert sequence Length = 1054 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 753 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 694 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 693 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 634 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 633 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 574 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 573 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 514 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 513 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 454 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 453 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 394 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 393 cacgccgcctgcctggaggattctcgcgcc 364 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ccaaaaacgacaagcaatccacca 37 ||||||||| |||||||||||||| Sbjct: 905 ccaaaaacgccaagcaatccacca 882
>dbj|AK099545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033A11, full insert sequence Length = 1073 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 754 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 695 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 694 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 635 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 634 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 575 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 574 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 515 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 514 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 455 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 454 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 395 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 394 cacgccgcctgcctggaggattctcgcgcc 365 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ccaaaaacgacaagcaatccacca 37 ||||||||| |||||||||||||| Sbjct: 906 ccaaaaacgccaagcaatccacca 883
>dbj|AK070324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051E03, full insert sequence Length = 1057 Score = 432 bits (218), Expect = e-118 Identities = 347/390 (88%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| |||| |||| |||| || ||||| | ||||| |||||||||| ||||||||||| Sbjct: 753 cgcgacggccagctccaggttcttcagggtcacctggaagctgacgaatcccatgaacca 694 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 693 gaactcgaagccgtcgtcggtcaccacctggacgtacttctgctccggccggtgcttgtt 634 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 633 ctcgctcggcttggccgtcttcaccctcctcagagggatggccaccttgtacggcacacg 574 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||||||||||| | || | ||||||| |||||||||||||||| ||||| || | ||| Sbjct: 573 caccgtgtcgccgctcggggtggtcagcgccagcgaccggtcgctccggaacgcgatcct 514 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct: 513 ctccgtcgatatgaagagcatgccggcgatcgggccggccgtggtggacaggtagcactg 454 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 |||||| | ||||||||||||||||| | |||||||||||||| |||||||| ||||| Sbjct: 453 ggaggccctcaggagcttctcgcccttgccgacggcgaaccaccggcggaagaccttctc 394 Query: 543 cacgccgccggcctggatgatccttgcgcc 572 ||||||||| ||||||| ||| || ||||| Sbjct: 393 cacgccgcctgcctggaggattctcgcgcc 364 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 ccaaaaacgacaagcaatccacca 37 ||||||||| |||||||||||||| Sbjct: 905 ccaaaaacgccaagcaatccacca 882
>ref|XM_466939.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1157 Score = 283 bits (143), Expect = 3e-73 Identities = 323/383 (84%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 792 cgcgacggcctgctccaggtggtgcagcgagcggtggtagctgacgaagcccatgaacca 733 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 ||||||||||||||||| ||| || | || || |||||||||||| ||| ||||| ||| Sbjct: 732 gaactcgaagccgtcgttggtgacgacctcgatgtacttctgctcgggcttgtgcttgtt 673 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||| ||||||||| ||| |||||||| || |||||||||||| || || Sbjct: 672 ctcgctcggcttggcggccttcaccttccgcagcgggatggtcaccttgtacgggacgcg 613 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||| ||||||| || | || || | |||||| ||||||||||||||| || |||| Sbjct: 612 caccttgtcgccgcccggggcggacaccgccagcggccggtcgctgcggaacgcgacccg 553 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||| ||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 552 ctccgtcgacacgaacagcatgccggcgatcggcccggccgtcgtcgacaggtagcactg 493 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 ||| ||| |||| ||||||||| ||| ||||||| ||||||| ||||||| || ||||| Sbjct: 492 cgacgccctgagcagcttctcgttcttgtccacggagaaccactgccggaacaccttctc 433 Query: 543 cacgccgccggcctggatgatcc 565 ||||||||||||||||| ||||| Sbjct: 432 cacgccgccggcctggaggatcc 410
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 283 bits (143), Expect = 3e-73 Identities = 323/383 (84%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 25546560 cgcgacggcctgctccaggtggtgcagcgagcggtggtagctgacgaagcccatgaacca 25546619 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 ||||||||||||||||| ||| || | || || |||||||||||| ||| ||||| ||| Sbjct: 25546620 gaactcgaagccgtcgttggtgacgacctcgatgtacttctgctcgggcttgtgcttgtt 25546679 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||| ||||||||| ||| |||||||| || |||||||||||| || || Sbjct: 25546680 ctcgctcggcttggcggccttcaccttccgcagcgggatggtcaccttgtacgggacgcg 25546739 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||| ||||||| || | || || | |||||| ||||||||||||||| || |||| Sbjct: 25546740 caccttgtcgccgcccggggcggacaccgccagcggccggtcgctgcggaacgcgacccg 25546799 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||| ||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 25546800 ctccgtcgacacgaacagcatgccggcgatcggcccggccgtcgtcgacaggtagcactg 25546859 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 ||| ||| |||| ||||||||| ||| ||||||| ||||||| ||||||| || ||||| Sbjct: 25546860 cgacgccctgagcagcttctcgttcttgtccacggagaaccactgccggaacaccttctc 25546919 Query: 543 cacgccgccggcctggatgatcc 565 ||||||||||||||||| ||||| Sbjct: 25546920 cacgccgccggcctggaggatcc 25546942 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtcgtcggtcaccagctggac 275 ||||||||| ||||| |||||||||||||||||||| |||||| |||| ||| || | Sbjct: 25542001 ctggtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtggccacgtgtat 25542060 Query: 276 gtacttctgctccggc 291 |||||||||||||||| Sbjct: 25542061 gtacttctgctccggc 25542076 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 433 acgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 |||||||||| |||||||| || ||| |||||||| | ||||||||||| Sbjct: 25542221 acgaagagcatcccggcgatggggccgccggtggtgtagaggtagcactg 25542270 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 540 ctccacgccgccggcctggatgatccttgcgcc 572 |||||||||||||||||| | |||||| ||||| Sbjct: 25542328 ctccacgccgccggcctgcaggatcctcgcgcc 25542360 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gaccggtcgctgcggaaggc 416 |||||||||||||||||||| Sbjct: 25542185 gaccggtcgctgcggaaggc 25542204
>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014E22 Length = 157627 Score = 283 bits (143), Expect = 3e-73 Identities = 323/383 (84%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 16607 cgcgacggcctgctccaggtggtgcagcgagcggtggtagctgacgaagcccatgaacca 16666 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 ||||||||||||||||| ||| || | || || |||||||||||| ||| ||||| ||| Sbjct: 16667 gaactcgaagccgtcgttggtgacgacctcgatgtacttctgctcgggcttgtgcttgtt 16726 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||| ||||||||| ||| |||||||| || |||||||||||| || || Sbjct: 16727 ctcgctcggcttggcggccttcaccttccgcagcgggatggtcaccttgtacgggacgcg 16786 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||| ||||||| || | || || | |||||| ||||||||||||||| || |||| Sbjct: 16787 caccttgtcgccgcccggggcggacaccgccagcggccggtcgctgcggaacgcgacccg 16846 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||| ||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 16847 ctccgtcgacacgaacagcatgccggcgatcggcccggccgtcgtcgacaggtagcactg 16906 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 ||| ||| |||| ||||||||| ||| ||||||| ||||||| ||||||| || ||||| Sbjct: 16907 cgacgccctgagcagcttctcgttcttgtccacggagaaccactgccggaacaccttctc 16966 Query: 543 cacgccgccggcctggatgatcc 565 ||||||||||||||||| ||||| Sbjct: 16967 cacgccgccggcctggaggatcc 16989 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtcgtcggtcaccagctggac 275 ||||||||| ||||| |||||||||||||||||||| |||||| |||| ||| || | Sbjct: 12048 ctggtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtggccacgtgtat 12107 Query: 276 gtacttctgctccggc 291 |||||||||||||||| Sbjct: 12108 gtacttctgctccggc 12123 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 433 acgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 |||||||||| |||||||| || ||| |||||||| | ||||||||||| Sbjct: 12268 acgaagagcatcccggcgatggggccgccggtggtgtagaggtagcactg 12317 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 540 ctccacgccgccggcctggatgatccttgcgcc 572 |||||||||||||||||| | |||||| ||||| Sbjct: 12375 ctccacgccgccggcctgcaggatcctcgcgcc 12407 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gaccggtcgctgcggaaggc 416 |||||||||||||||||||| Sbjct: 12232 gaccggtcgctgcggaaggc 12251
>dbj|AP004067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1581_H09 Length = 86699 Score = 283 bits (143), Expect = 3e-73 Identities = 323/383 (84%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 37959 cgcgacggcctgctccaggtggtgcagcgagcggtggtagctgacgaagcccatgaacca 38018 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 ||||||||||||||||| ||| || | || || |||||||||||| ||| ||||| ||| Sbjct: 38019 gaactcgaagccgtcgttggtgacgacctcgatgtacttctgctcgggcttgtgcttgtt 38078 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||| ||||||||| ||| |||||||| || |||||||||||| || || Sbjct: 38079 ctcgctcggcttggcggccttcaccttccgcagcgggatggtcaccttgtacgggacgcg 38138 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||| ||||||| || | || || | |||||| ||||||||||||||| || |||| Sbjct: 38139 caccttgtcgccgcccggggcggacaccgccagcggccggtcgctgcggaacgcgacccg 38198 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||| ||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 38199 ctccgtcgacacgaacagcatgccggcgatcggcccggccgtcgtcgacaggtagcactg 38258 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 ||| ||| |||| ||||||||| ||| ||||||| ||||||| ||||||| || ||||| Sbjct: 38259 cgacgccctgagcagcttctcgttcttgtccacggagaaccactgccggaacaccttctc 38318 Query: 543 cacgccgccggcctggatgatcc 565 ||||||||||||||||| ||||| Sbjct: 38319 cacgccgccggcctggaggatcc 38341 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtcgtcggtcaccagctggac 275 ||||||||| ||||| |||||||||||||||||||| |||||| |||| ||| || | Sbjct: 33400 ctggtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtggccacgtgtat 33459 Query: 276 gtacttctgctccggc 291 |||||||||||||||| Sbjct: 33460 gtacttctgctccggc 33475 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 433 acgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 |||||||||| |||||||| || ||| |||||||| | ||||||||||| Sbjct: 33620 acgaagagcatcccggcgatggggccgccggtggtgtagaggtagcactg 33669 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 540 ctccacgccgccggcctggatgatccttgcgcc 572 |||||||||||||||||| | |||||| ||||| Sbjct: 33727 ctccacgccgccggcctgcaggatcctcgcgcc 33759 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 gaccggtcgctgcggaaggc 416 |||||||||||||||||||| Sbjct: 33584 gaccggtcgctgcggaaggc 33603
>dbj|AK069779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H22, full insert sequence Length = 1157 Score = 283 bits (143), Expect = 3e-73 Identities = 323/383 (84%) Strand = Plus / Minus Query: 183 cgcgatggcctgctcgaggtgctgcagggacgcctggtagctgacgaagcccatgaacca 242 ||||| ||||||||| ||||| ||||| || |||||||||||||||||||||||||| Sbjct: 792 cgcgacggcctgctccaggtggtgcagcgagcggtggtagctgacgaagcccatgaacca 733 Query: 243 gaactcgaagccgtcgtcggtcaccagctggacgtacttctgctccggccggtgctggtt 302 ||||||||||||||||| ||| || | || || |||||||||||| ||| ||||| ||| Sbjct: 732 gaactcgaagccgtcgttggtgacgacctcgatgtacttctgctcgggcttgtgcttgtt 673 Query: 303 ctcgctcggcctggccgccttcaccctcctcagcgggacggccaccttgtacggcacacg 362 |||||||||| |||| ||||||||| ||| |||||||| || |||||||||||| || || Sbjct: 672 ctcgctcggcttggcggccttcaccttccgcagcgggatggtcaccttgtacgggacgcg 613 Query: 363 caccgtgtcgcccttgggcgaggtcagctccagcgaccggtcgctgcggaaggccaccct 422 |||| ||||||| || | || || | |||||| ||||||||||||||| || |||| Sbjct: 612 caccttgtcgccgcccggggcggacaccgccagcggccggtcgctgcggaatgcgacccg 553 Query: 423 ctccgacgatacgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 ||||| ||| ||||| |||| ||||||||||| ||||| || || |||||||||||||| Sbjct: 552 ctccgtcgacacgaacagcatgccggcgatcggcccggccgtcgtcgacaggtagcactg 493 Query: 483 cgaggccttgaggagcttctcgcccttctccacggcgaaccaccgccggaagactttctc 542 ||| ||| |||| ||||||||| ||| ||||||| ||||||| ||||||| || ||||| Sbjct: 492 cgacgccctgagcagcttctcgttcttgtccacggagaaccactgccggaacaccttctc 433 Query: 543 cacgccgccggcctggatgatcc 565 ||||||||||||||||| ||||| Sbjct: 432 cacgccgccggcctggaggatcc 410
>ref|XM_473245.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 702 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 327 cctcctcagcgggacggccaccttgtacggcacacgcaccgtgtcgcccttgggcgaggt 386 |||||| |||||||| |||||||||| ||||| ||| | ||||||||||| |||||| Sbjct: 546 cctcctgagcgggaccaccaccttgtagggcacccgcgcgacgtcgcccttggccgaggt 487 Query: 387 cagctccagcgaccggtcgctgcggaaggccaccctctccgacgatacgaagagcactcc 446 | | | || |||||||||||||||||| ||| ||| | || |||||||||| || Sbjct: 486 gaccgtgaccggccggtcgctgcggaaggcgaccttcttggtggagacgaagagcatccc 427 Query: 447 ggcgatcggtccggcggtggtggacaggtagcactgc 483 |||||| || ||| |||||||| |||||||||||||| Sbjct: 426 ggcgatgggcccgccggtggtgtacaggtagcactgc 390 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtc 257 ||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 657 ctggtagctcacgaaccccatgaaccagaactcgaagccgtc 616
>dbj|AK061581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H09, full insert sequence Length = 1103 Score = 73.8 bits (37), Expect = 6e-10 Identities = 127/157 (80%) Strand = Plus / Minus Query: 327 cctcctcagcgggacggccaccttgtacggcacacgcaccgtgtcgcccttgggcgaggt 386 |||||| |||||||| |||||||||| ||||| ||| | ||||||||||| |||||| Sbjct: 669 cctcctgagcgggaccaccaccttgtagggcacccgcgcgacgtcgcccttggccgaggt 610 Query: 387 cagctccagcgaccggtcgctgcggaaggccaccctctccgacgatacgaagagcactcc 446 | | | || |||||||||||||||||| ||| ||| | || |||||||||| || Sbjct: 609 gaccgtgaccggccggtcgctgcggaaggcgaccttcttggtggagacgaagagcatccc 550 Query: 447 ggcgatcggtccggcggtggtggacaggtagcactgc 483 |||||| || ||| |||||||| |||||||||||||| Sbjct: 549 ggcgatgggcccgccggtggtgtacaggtagcactgc 513 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtc 257 ||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 780 ctggtagctcacgaaccccatgaaccagaactcgaagccgtc 739
>ref|XM_466938.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaagccgtcgtcggtcaccagctggac 275 ||||||||| ||||| |||||||||||||||||||| |||||| |||| ||| || | Sbjct: 648 ctggtagctcacgaatcccatgaaccagaactcgaacccgtcgacggtggccacgtgtat 589 Query: 276 gtacttctgctccggc 291 |||||||||||||||| Sbjct: 588 gtacttctgctccggc 573 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 433 acgaagagcactccggcgatcggtccggcggtggtggacaggtagcactg 482 |||||||||| |||||||| || ||| |||||||| | ||||||||||| Sbjct: 428 acgaagagcatcccggcgatggggccgccggtggtgtagaggtagcactg 379 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 540 ctccacgccgccggcctggatgatccttgcgcc 572 |||||||||||||||||| | |||||| ||||| Sbjct: 321 ctccacgccgccggcctgcaggatcctcgcgcc 289 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 gaccggtcgctgcggaaggc 416 |||||||||||||||||||| Sbjct: 464 gaccggtcgctgcggaaggc 445
>ref|NM_122241.2| Arabidopsis thaliana unknown protein AT5G23350 mRNA, complete cds Length = 1020 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaag 252 ||||||||| ||||| |||||||||||||| |||||| Sbjct: 795 ctggtagctcacgaatcccatgaaccagaagtcgaag 759
>ref|NM_122240.2| Arabidopsis thaliana unknown protein AT5G23340 mRNA, complete cds Length = 2634 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaag 252 ||||||||| ||||| |||||||||||||| |||||| Sbjct: 1950 ctggtagctcacgaatcccatgaaccagaagtcgaag 1986
>dbj|AB007648.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKD15 Length = 76329 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaag 252 ||||||||| ||||| |||||||||||||| |||||| Sbjct: 69722 ctggtagctcacgaatcccatgaaccagaagtcgaag 69758 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 217 tggtagctgacgaagcccatgaaccagaactcgaagccgtcg 258 |||||||| | ||| |||||||||||||| || ||||||||| Sbjct: 74723 tggtagctcaagaatcccatgaaccagaagtcaaagccgtcg 74764 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaa 245 ||||||||| ||||| |||||||||||||| Sbjct: 73530 ctggtagctcacgaatcccatgaaccagaa 73501
>dbj|AK118949.1| Arabidopsis thaliana At5g23350 mRNA for unknown protein, complete cds, clone: RAFL21-29-C05 Length = 1038 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaactcgaag 252 ||||||||| ||||| |||||||||||||| |||||| Sbjct: 698 ctggtagctcacgaatcccatgaaccagaagtcgaag 662
>ref|NM_187664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 795 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactc 248 ||||||||||||||||||||||| Sbjct: 728 acgaagcccatgaaccagaactc 706
>ref|XM_479184.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1000 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 687 gtagttgacgaagcccatgaaccagaa 661
>ref|XM_506479.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.123 mRNA Length = 1055 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 743 gtagttgacgaagcccatgaaccagaa 717
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactc 248 ||||||||||||||||||||||| Sbjct: 4576213 acgaagcccatgaaccagaactc 4576191 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 29906844 gacgaaccccatgaaccagaactcg 29906868
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 25625910 gtagttgacgaagcccatgaaccagaa 25625884
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactc 248 ||||||||||||||||||||||| Sbjct: 4576328 acgaagcccatgaaccagaactc 4576306 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 29998266 gacgaaccccatgaaccagaactcg 29998290
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 79883 gtagttgacgaagcccatgaaccagaa 79857
>dbj|AK071567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100G12, full insert sequence Length = 1055 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 743 gtagttgacgaagcccatgaaccagaa 717
>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full insert sequence Length = 1136 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactc 248 ||||||||||||||||||||||| Sbjct: 879 acgaagcccatgaaccagaactc 857
>dbj|AK059824.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-E06, full insert sequence Length = 1000 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gtagctgacgaagcccatgaaccagaa 245 |||| |||||||||||||||||||||| Sbjct: 687 gtagttgacgaagcccatgaaccagaa 661
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactc 248 ||||||||||||||||||||||| Sbjct: 17168 acgaagcccatgaaccagaactc 17146
>ref|NM_122242.3| Arabidopsis thaliana unknown protein AT5G23360 mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaa 245 ||||||||| ||||| |||||||||||||| Sbjct: 662 ctggtagctcacgaatcccatgaaccagaa 633
>ref|NM_122243.2| Arabidopsis thaliana unknown protein AT5G23370 mRNA, complete cds Length = 941 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Minus Query: 217 tggtagctgacgaagcccatgaaccagaactcgaagccgtcg 258 |||||||| | ||| |||||||||||||| || ||||||||| Sbjct: 678 tggtagctcaagaatcccatgaaccagaagtcaaagccgtcg 637
>gb|BT011297.1| Arabidopsis thaliana At5g23360 gene, complete cds Length = 633 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaa 245 ||||||||| ||||| |||||||||||||| Sbjct: 585 ctggtagctcacgaatcccatgaaccagaa 556
>gb|BT010826.1| Arabidopsis thaliana At5g23360 mRNA, complete cds Length = 751 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaa 245 ||||||||| ||||| |||||||||||||| Sbjct: 610 ctggtagctcacgaatcccatgaaccagaa 581
>emb|BX830405.1|CNS0A03A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB78ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 958 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 216 ctggtagctgacgaagcccatgaaccagaa 245 ||||||||| ||||| |||||||||||||| Sbjct: 662 ctggtagctcacgaatcccatgaaccagaa 633
>ref|XM_469636.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1239 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 897 gacgaaccccatgaaccagaactcg 873
>gb|M93010.1|HUMMAMEPI Human epithelial cell marker protein 1 (HMe1) mRNA, complete cds Length = 1245 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 118 gagctcctcgcccttctccacggcg 94
>ref|XM_866327.1| PREDICTED: Bos taurus similar to reprimo, TP53 dependant G2 arrest mediator candidate (LOC614739), mRNA Length = 1120 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 308 cgaagccgtcgtcggtcacca 288
>gb|BC000995.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:5018 IMAGE:3445915), complete cds Length = 1309 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 156 gagctcctcgcccttctccacggcg 132
>gb|BC000329.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:8516 IMAGE:2822397), complete cds Length = 1312 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 159 gagctcctcgcccttctccacggcg 135
>gb|BC023552.2| Homo sapiens stratifin, mRNA (cDNA clone MGC:19713 IMAGE:3534328), complete cds Length = 1417 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 183 gagctcctcgcccttctccacggcg 159
>ref|NM_006142.3| Homo sapiens stratifin (SFN), mRNA Length = 1336 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 179 gagctcctcgcccttctccacggcg 155
>ref|XM_754135.1| Ustilago maydis 521 hypothetical protein (UM03081.1) partial mRNA Length = 4047 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 actcgaagccgtcgtcggtca 265 ||||||||||||||||||||| Sbjct: 1583 actcgaagccgtcgtcggtca 1603
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 103762 gacgaaccccatgaaccagaactcg 103738
>emb|CR712619.2|CNS0GCT3 Tetraodon nigroviridis full-length cDNA Length = 616 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 342 cgaagccgtcgtcggtcacca 322
>emb|CR711083.2|CNS0GBMF Tetraodon nigroviridis full-length cDNA Length = 620 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 342 cgaagccgtcgtcggtcacca 322
>emb|CR700034.2|CNS0G33I Tetraodon nigroviridis full-length cDNA Length = 987 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 285 cgaagccgtcgtcggtcacca 265
>emb|CR694070.2|CNS0FYHU Tetraodon nigroviridis full-length cDNA Length = 970 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 303 cgaagccgtcgtcggtcacca 283
>emb|CR691418.2|CNS0FWG6 Tetraodon nigroviridis full-length cDNA Length = 996 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 306 cgaagccgtcgtcggtcacca 286
>gb|BC001550.1| Homo sapiens stratifin, mRNA (cDNA clone MGC:5019 IMAGE:3457665), complete cds Length = 1222 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 161 gagctcctcgcccttctccacggcg 137
>gb|BC114727.1| Bos taurus cDNA clone MGC:138015 IMAGE:8083333, complete cds Length = 1472 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 330 cgaagccgtcgtcggtcacca 310
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 32912 gagctcctcgcccttctccacggcg 32936
>emb|X57348.1|HS9112 H.sapiens mRNA (clone 9112) Length = 1450 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 273 gagctcctcgcccttctccacggcg 249
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 442 actccggcgatcggtccggcggtgg 466 |||||||||||||||||||| |||| Sbjct: 4110043 actccggcgatcggtccggcagtgg 4110067
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 307 ctcggcctggccgccttcaccctcc 331 ||||||||||||||| ||||||||| Sbjct: 207574 ctcggcctggccgccgtcaccctcc 207550
>emb|CR610159.1| full-length cDNA clone CS0DF022YC03 of Fetal brain of Homo sapiens (human) Length = 1405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 303 cgaagccgtcgtcggtcacca 283
>emb|CR609982.1| full-length cDNA clone CS0DF013YO17 of Fetal brain of Homo sapiens (human) Length = 1244 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 203 cgaagccgtcgtcggtcacca 183
>dbj|AK074808.1| Homo sapiens cDNA FLJ90327 fis, clone NT2RP2001915, highly similar to Candidate mediator of the p53-dependent G2 arrest Length = 1422 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 319 cgaagccgtcgtcggtcacca 299
>emb|CR596780.1| full-length cDNA clone CS0DF005YF04 of Fetal brain of Homo sapiens (human) Length = 1397 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 308 cgaagccgtcgtcggtcacca 288
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 49387 gagctcctcgcccttctccacggcg 49363
>emb|CR541926.1| Homo sapiens full open reading frame cDNA clone RZPDo834H1133D for gene SFN, stratifin; complete cds, without stopcodon Length = 744 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 108 gagctcctcgcccttctccacggcg 84
>emb|CR541905.1| Homo sapiens full open reading frame cDNA clone RZPDo834E0233D for gene SFN, stratifin; complete cds, incl. stopcodon Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 108 gagctcctcgcccttctccacggcg 84
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 72785 gacgaaccccatgaaccagaactcg 72809
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 540 ctccacgccgccggcctggatgatc 564 ||||| ||||||||||||||||||| Sbjct: 5025351 ctccatgccgccggcctggatgatc 5025327 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gttctcgctcggcctggccg 319 |||||||||||||||||||| Sbjct: 854970 gttctcgctcggcctggccg 854989
>gb|AC012501.7| Homo sapiens BAC clone RP11-440F15 from 2, complete sequence Length = 214838 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 118526 cgaagccgtcgtcggtcacca 118546
>ref|NM_019845.2| Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate (RPRM), mRNA Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 367 cgaagccgtcgtcggtcacca 347
>gb|AF152893.1|AF152893 Mus musculus 14-3-3 protein sigma (Mme1) mRNA, complete cds Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 108 gagctcctcgcccttctccacggcg 84
>gb|AY894114.1| Synthetic construct Homo sapiens clone FLH130877.01L stratifin (SFN) mRNA, partial cds Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 108 gagctcctcgcccttctccacggcg 84
>gb|AY893275.1| Synthetic construct Homo sapiens clone FLH130843.01X stratifin (SFN) mRNA, complete cds Length = 747 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 108 gagctcctcgcccttctccacggcg 84
>dbj|AK104642.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-F11, full insert sequence Length = 1045 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 866 gacgaaccccatgaaccagaactcg 842
>dbj|AK104415.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F03, full insert sequence Length = 1174 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 914 gacgaaccccatgaaccagaactcg 890
>dbj|AK073026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144G12, full insert sequence Length = 1210 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 868 gacgaaccccatgaaccagaactcg 844
>gb|BC002995.1| Homo sapiens stratifin, mRNA (cDNA clone MGC:3828 IMAGE:2822397), complete cds Length = 1312 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 159 gagctcctcgcccttctccacggcg 135
>dbj|AK060947.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F03, full insert sequence Length = 1226 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 913 gacgaaccccatgaaccagaactcg 889
>dbj|AK060219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-E07, full insert sequence Length = 366 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 gacgaagcccatgaaccagaactcg 249 |||||| |||||||||||||||||| Sbjct: 44 gacgaaccccatgaaccagaactcg 20
>gb|BC002908.2| Homo sapiens reprimo, TP53 dependent G2 arrest mediator candidate, mRNA (cDNA clone MGC:11260 IMAGE:3942270), complete cds Length = 1440 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 311 cgaagccgtcgtcggtcacca 291
>gb|AF029082.1|AF029082 Homo sapiens 14-3-3 sigma protein mRNA, complete cds Length = 1320 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 179 gagctcctcgcccttctccacggcg 155
>gb|AF029081.1|AF029081 Homo sapiens 14-3-3 sigma protein promoter and gene, complete cds Length = 10034 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 495 gagcttctcgcccttctccacggcg 519 ||||| ||||||||||||||||||| Sbjct: 8745 gagctcctcgcccttctccacggcg 8721
>dbj|AB043585.1| Homo sapiens mRNA for Reprimo, complete cds Length = 1510 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 cgaagccgtcgtcggtcacca 268 ||||||||||||||||||||| Sbjct: 367 cgaagccgtcgtcggtcacca 347
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactcg 249 ||||| |||||||||||||||||| Sbjct: 76996 acgaaccccatgaaccagaactcg 76973
>emb|Z81136.1|CEW02B8 Caenorhabditis elegans Cosmid W02B8, complete sequence Length = 32568 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 agaactcgaagccgtcgtcg 261 |||||||||||||||||||| Sbjct: 12882 agaactcgaagccgtcgtcg 12901
>emb|BX842650.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 5/11 Length = 349723 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 541 tccacgccgccggcctggat 560 |||||||||||||||||||| Sbjct: 248343 tccacgccgccggcctggat 248362
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 gccgccggcctggatgatcc 565 |||||||||||||||||||| Sbjct: 64261 gccgccggcctggatgatcc 64280
>emb|AJ308422.1|RFA308422 Rhodococcus fascians pgk gene for polyphosphate glucokinase and rofA gene for RNA polymerase sigma 70 Length = 2794 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 ggagcttctcgcccttctcc 513 |||||||||||||||||||| Sbjct: 1633 ggagcttctcgcccttctcc 1614
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 184 gcgatggcctgctcgaggtgctgcaggg 211 |||||||||| ||||| ||||||||||| Sbjct: 2804704 gcgatggcctcctcgaagtgctgcaggg 2804677
>gb|DQ397575.1| Cenarchaeum symbiosum clone C11D05, complete sequence Length = 41867 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 336 cgggacggccaccttgtacggcacacgcaccgtgtc 371 |||||||||||||| ||| ||| | ||||||||||| Sbjct: 949 cgggacggccacctcgtatggctcgcgcaccgtgtc 984
>gb|DQ397573.1| Cenarchaeum symbiosum clone C09C06, complete sequence Length = 39895 Score = 40.1 bits (20), Expect = 7.8 Identities = 32/36 (88%) Strand = Plus / Minus Query: 336 cgggacggccaccttgtacggcacacgcaccgtgtc 371 |||||||||||||| ||| ||| | ||||||||||| Sbjct: 20142 cgggacggccacctcgtatggctcgcgcaccgtgtc 20107
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gccgccggcctggatgatcc 565 |||||||||||||||||||| Sbjct: 4133365 gccgccggcctggatgatcc 4133346
>ref|NM_064513.2| Caenorhabditis elegans W02B8.2 (W02B8.2) mRNA, complete cds Length = 3843 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 agaactcgaagccgtcgtcg 261 |||||||||||||||||||| Sbjct: 2762 agaactcgaagccgtcgtcg 2781
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gccgccggcctggatgatcc 565 |||||||||||||||||||| Sbjct: 8718206 gccgccggcctggatgatcc 8718187
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 498 cttctcgcccttctccacggcgaa 521 ||||||||||||||||||| |||| Sbjct: 692597 cttctcgcccttctccacgacgaa 692574
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 cgcgatggcctgctcgaggt 202 |||||||||||||||||||| Sbjct: 3835095 cgcgatggcctgctcgaggt 3835114
>gb|AY109749.1| Zea mays CL65073_1 mRNA sequence Length = 828 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 226 acgaagcccatgaaccagaactcg 249 ||||| |||||||||||||||||| Sbjct: 801 acgaaacccatgaaccagaactcg 778
>emb|AL805903.12| Mouse DNA sequence from clone RP23-464N23 on chromosome 4, complete sequence Length = 136895 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gtgcgatttgatcaatcagt 160 |||||||||||||||||||| Sbjct: 120765 gtgcgatttgatcaatcagt 120746 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,790,041 Number of Sequences: 3902068 Number of extensions: 2790041 Number of successful extensions: 54290 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 53063 Number of HSP's gapped (non-prelim): 1219 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
