ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_493841.1| Oryza sativa (japonica cultivar-group), mRNA 176 6e-41
2dbj|AK101658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 176 6e-41
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 155 2e-34
4gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genom... 155 2e-34
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
6gb|AY112277.1| Zea mays CL32172_1 mRNA sequence 80 1e-11
7emb|AL355372.15| Human DNA sequence from clone RP11-691I13 on ch... 48 0.038
8gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 46 0.15
9gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete... 46 0.15
10emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in... 46 0.15
11ref|XM_419584.1| PREDICTED: Gallus gallus similar to angiotensin... 44 0.59
12emb|CR407474.1| Gallus gallus finished cDNA, clone ChEST141l17 44 0.59
13emb|BX950558.1| Gallus gallus finished cDNA, clone ChEST562d22 44 0.59
14gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome... 42 2.3
15gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, compl... 42 2.3
16gb|U80446.1| Caenorhabditis elegans cosmid F56A3, complete sequence 42 2.3
17emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in... 42 2.3
18gb|AC098591.4| Homo sapiens BAC clone RP11-333E13 from 4, comple... 42 2.3
19emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chr... 42 2.3
20gb|AY391419.1| Danio rerio differentially expressed in FDCP 6-li... 40 9.3
21gb|BC054935.1| Danio rerio zgc:63721, mRNA (cDNA clone MGC:63721... 40 9.3
22ref|NM_201040.1| Danio rerio zgc:63721 (zgc:63721), mRNA 40 9.3
23gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome 40 9.3
24emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in... 40 9.3
25gb|AY083997.1| Homo sapiens E2F transcription factor (E2F6) gene... 40 9.3
26emb|AJ493061.1|HSA493061 Homo sapiens E2F6 gene for transcriptio... 40 9.3
27emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in... 40 9.3
28gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-3... 40 9.3
29gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-30... 40 9.3
30gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 9.3
31gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, comple... 40 9.3
32gb|AC008794.8| Homo sapiens chromosome 19 clone CTD-2050I18, com... 40 9.3
33gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complet... 40 9.3
34gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Can... 40 9.3
35gb|AF150911.1|AF150911 Greya punctiferella cytochrome oxidase su... 40 9.3
36emb|BX004884.10| Zebrafish DNA sequence from clone DKEY-6N6 in l... 40 9.3
37gb|L22234.1|GYAMTCYTBU Greya enchrysa mitochondrial cytochrome o... 40 9.3
38gb|L22227.1|GYAMTCYTBT Greya punctiferella mitochondrial cytochr... 40 9.3 
>ref|XM_493841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 603

 Score =  176 bits (89), Expect = 6e-41
 Identities = 249/297 (83%), Gaps = 4/297 (1%)
 Strand = Plus / Minus

                                                                       
Query: 381 agaacgcttactattatgatcacagcaacagatgtcttcttggtttccacctccgagcct 440
           ||||| || ||||||||||| |||| ||| |||| ||| || |||||||| || |||| |
Sbjct: 455 agaacactgactattatgattacagtaacggatgactttttagtttccacttctgagc-t 397

                                                                       
Query: 441 agggtgatgggctgcagcatcaccagcagagacagtacagtttgggcatagcaaagtcgc 500
           ||  | ||||  ||||| |||||| |||||| |||| || ||||||||||| ||||| ||
Sbjct: 396 agaatcatggtttgcagaatcacccgcagaggcagtgcaatttgggcataggaaagtagc 337

                                                                       
Query: 501 attgaactgcccttccttgaaatgtatgtacttgccgtcttttgaagtcactagaacaca 560
           ||||||||| || |||||||||||  |||| || || | ||||||| |||||||||||||
Sbjct: 336 attgaactggccctccttgaaatgggtgtattttcc-ttttttgaaatcactagaacaca 278

                                                                       
Query: 561 gctcccattcatcaaacacatcattcctaaacatatccttcttcgtacaaaccacatcgc 620
           |||||||||||||| ||| |||||   ||||  ||||| ||||||||||||||||| | |
Sbjct: 277 gctcccattcatcatacaaatcatgtttaaatgtatcc-tcttcgtacaaaccacacctc 219

                                                                    
Query: 621 ttgcacttcttttcttggaggttccgttaagggctgccatgactcttcacccttaaa 677
           ||||| |||||||| |||| |||| ||||||||||||||||| ||||| ||||||||
Sbjct: 218 ttgcatttcttttc-tggaagttctgttaagggctgccatgattcttcgcccttaaa 163



 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Minus

                                                                       
Query: 233 tcagagttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagctt 292
           |||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||| ||
Sbjct: 603 tcagagttcattgccaaggcccagttcgtcttcaatgtcgtctccctcttcgaagagttt 544

                                                                 
Query: 293 gagaaatcgtaactgatcccgctccctcttcttcctcagccagtacttgtagcc 346
           ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 543 gaggaatcgtaactgatcccgctccctcttcttcttcagccagtacttgtagcc 490
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>dbj|AK101658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I20, full
           insert sequence
          Length = 1065

 Score =  176 bits (89), Expect = 6e-41
 Identities = 249/297 (83%), Gaps = 4/297 (1%)
 Strand = Plus / Minus

                                                                       
Query: 381 agaacgcttactattatgatcacagcaacagatgtcttcttggtttccacctccgagcct 440
           ||||| || ||||||||||| |||| ||| |||| ||| || |||||||| || |||| |
Sbjct: 682 agaacactgactattatgattacagtaacggatgactttttagtttccacttctgagc-t 624

                                                                       
Query: 441 agggtgatgggctgcagcatcaccagcagagacagtacagtttgggcatagcaaagtcgc 500
           ||  | ||||  ||||| |||||| |||||| |||| || ||||||||||| ||||| ||
Sbjct: 623 agaatcatggtttgcagaatcacccgcagaggcagtgcaatttgggcataggaaagtagc 564

                                                                       
Query: 501 attgaactgcccttccttgaaatgtatgtacttgccgtcttttgaagtcactagaacaca 560
           ||||||||| || |||||||||||  |||| || || | ||||||| |||||||||||||
Sbjct: 563 attgaactggccctccttgaaatgggtgtattttcc-ttttttgaaatcactagaacaca 505

                                                                       
Query: 561 gctcccattcatcaaacacatcattcctaaacatatccttcttcgtacaaaccacatcgc 620
           |||||||||||||| ||| |||||   ||||  ||||| ||||||||||||||||| | |
Sbjct: 504 gctcccattcatcatacaaatcatgtttaaatgtatcc-tcttcgtacaaaccacacctc 446

                                                                    
Query: 621 ttgcacttcttttcttggaggttccgttaagggctgccatgactcttcacccttaaa 677
           ||||| |||||||| |||| |||| ||||||||||||||||| ||||| ||||||||
Sbjct: 445 ttgcatttcttttc-tggaagttctgttaagggctgccatgattcttcgcccttaaa 390



 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Minus

                                                                       
Query: 233 tcagagttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagctt 292
           |||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||| ||
Sbjct: 830 tcagagttcattgccaaggcccagttcgtcttcaatgtcgtctccctcttcgaagagttt 771

                                                                 
Query: 293 gagaaatcgtaactgatcccgctccctcttcttcctcagccagtacttgtagcc 346
           ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 770 gaggaatcgtaactgatcccgctccctcttcttcttcagccagtacttgtagcc 717
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                           
Query: 233     tcagagttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagctt 292
               |||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||| ||
Sbjct: 9672741 tcagagttcattgccaaggcccagttcgtcttcaatgtcgtctccctcttcgaagagttt 9672800

                                                                     
Query: 293     gagaaatcgtaactgatcccgctccctcttcttcctcagccagtacttgtagcc 346
               ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9672801 gaggaatcgtaactgatcccgctccctcttcttcttcagccagtacttgtagcc 9672854



 Score =  139 bits (70), Expect = 1e-29
 Identities = 166/194 (85%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                           
Query: 466     gcagagacagtacagtttgggcatagcaaagtcgcattgaactgcccttccttgaaatgt 525
               |||||| |||| || ||||||||||| ||||| ||||||||||| || ||||||||||| 
Sbjct: 9673187 gcagaggcagtgcaatttgggcataggaaagtagcattgaactggccctccttgaaatgg 9673246

                                                                           
Query: 526     atgtacttgccgtcttttgaagtcactagaacacagctcccattcatcaaacacatcatt 585
                |||| || || | ||||||| ||||||||||||||||||||||||||| ||| ||||| 
Sbjct: 9673247 gtgtattttcctt-ttttgaaatcactagaacacagctcccattcatcatacaaatcatg 9673305

                                                                           
Query: 586     cctaaacatatccttcttcgtacaaaccacatcgcttgcacttcttttcttggaggttcc 645
                 ||||  ||||| ||||||||||||||||| | |||||| |||||||| |||| |||| 
Sbjct: 9673306 tttaaatgtatcc-tcttcgtacaaaccacacctcttgcatttcttttc-tggaagttct 9673363

                             
Query: 646     gttaagggctgcca 659
               ||||||||||||||
Sbjct: 9673364 gttaagggctgcca 9673377
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>gb|AC084405.6| Oryza sativa chromosome 3 BAC OSJNBa0044H10 genomic sequence, complete
             sequence
          Length = 165113

 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                         
Query: 233   tcagagttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagctt 292
             |||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||| ||
Sbjct: 93640 tcagagttcattgccaaggcccagttcgtcttcaatgtcgtctccctcttcgaagagttt 93699

                                                                   
Query: 293   gagaaatcgtaactgatcccgctccctcttcttcctcagccagtacttgtagcc 346
             ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 93700 gaggaatcgtaactgatcccgctccctcttcttcttcagccagtacttgtagcc 93753



 Score =  139 bits (70), Expect = 1e-29
 Identities = 166/194 (85%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                         
Query: 466   gcagagacagtacagtttgggcatagcaaagtcgcattgaactgcccttccttgaaatgt 525
             |||||| |||| || ||||||||||| ||||| ||||||||||| || ||||||||||| 
Sbjct: 94086 gcagaggcagtgcaatttgggcataggaaagtagcattgaactggccctccttgaaatgg 94145

                                                                         
Query: 526   atgtacttgccgtcttttgaagtcactagaacacagctcccattcatcaaacacatcatt 585
              |||| || || | ||||||| ||||||||||||||||||||||||||| ||| ||||| 
Sbjct: 94146 gtgtattttcctt-ttttgaaatcactagaacacagctcccattcatcatacaaatcatg 94204

                                                                         
Query: 586   cctaaacatatccttcttcgtacaaaccacatcgcttgcacttcttttcttggaggttcc 645
               ||||  ||||| ||||||||||||||||| | |||||| |||||||| |||| |||| 
Sbjct: 94205 tttaaatgtatcc-tcttcgtacaaaccacacctcttgcatttcttttc-tggaagttct 94262

                           
Query: 646   gttaagggctgcca 659
             ||||||||||||||
Sbjct: 94263 gttaagggctgcca 94276
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  155 bits (78), Expect = 2e-34
 Identities = 105/114 (92%)
 Strand = Plus / Plus

                                                                           
Query: 233     tcagagttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagctt 292
               |||||||||||||| ||||||||| ||||| || |||||||| ||||| |||||||| ||
Sbjct: 9670862 tcagagttcattgccaaggcccagttcgtcttcaatgtcgtctccctcttcgaagagttt 9670921

                                                                     
Query: 293     gagaaatcgtaactgatcccgctccctcttcttcctcagccagtacttgtagcc 346
               ||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9670922 gaggaatcgtaactgatcccgctccctcttcttcttcagccagtacttgtagcc 9670975



 Score =  139 bits (70), Expect = 1e-29
 Identities = 166/194 (85%), Gaps = 3/194 (1%)
 Strand = Plus / Plus

                                                                           
Query: 466     gcagagacagtacagtttgggcatagcaaagtcgcattgaactgcccttccttgaaatgt 525
               |||||| |||| || ||||||||||| ||||| ||||||||||| || ||||||||||| 
Sbjct: 9671308 gcagaggcagtgcaatttgggcataggaaagtagcattgaactggccctccttgaaatgg 9671367

                                                                           
Query: 526     atgtacttgccgtcttttgaagtcactagaacacagctcccattcatcaaacacatcatt 585
                |||| || || | ||||||| ||||||||||||||||||||||||||| ||| ||||| 
Sbjct: 9671368 gtgtattttcctt-ttttgaaatcactagaacacagctcccattcatcatacaaatcatg 9671426

                                                                           
Query: 586     cctaaacatatccttcttcgtacaaaccacatcgcttgcacttcttttcttggaggttcc 645
                 ||||  ||||| ||||||||||||||||| | |||||| |||||||| |||| |||| 
Sbjct: 9671427 tttaaatgtatcc-tcttcgtacaaaccacacctcttgcatttcttttc-tggaagttct 9671484

                             
Query: 646     gttaagggctgcca 659
               ||||||||||||||
Sbjct: 9671485 gttaagggctgcca 9671498
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>gb|AY112277.1| Zea mays CL32172_1 mRNA sequence
          Length = 893

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 606 tacaaaccacatcgcttgcacttcttttcttggaggttccgttaagggctgccatgactc 665
           |||||||||||||||||||| ||||||   |||| | || ||||||||||||||||| ||
Sbjct: 519 tacaaaccacatcgcttgcatttctttatctggaagctctgttaagggctgccatgattc 578

                       
Query: 666 ttcacccttaaa 677
           ||||||||||||
Sbjct: 579 ttcacccttaaa 590



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 478 cagtttgggcatagcaaagtcgcattgaactgcccttcctt 518
           |||||||||||||| || || ||||||||||| ||||||||
Sbjct: 390 cagtttgggcataggaatgttgcattgaactggccttcctt 430



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                  
Query: 375 gaagcgagaacgcttactattatgatcacagcaacagatgtcttcttggtttcca 429
           ||||| ||||| || ||||||||||| ||| |||  ||||||||||| |||||||
Sbjct: 291 gaagcaagaacactaactattatgatgacaacaattgatgtcttcttagtttcca 345



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 239 ttcattgctaaggcccagctcgtcgtccatgtcgtcaccctcctcgaagagcttgag 295
           ||||||| ||||||||||||| || || | ||| || ||||| || |||||||||||
Sbjct: 155 ttcattggtaaggcccagctcatcttcaaggtcatctccctcttcaaagagcttgag 211
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>emb|AL355372.15| Human DNA sequence from clone RP11-691I13 on chromosome 10 Contains 3'
             end of the gene for a novel protein
             (FLJ10817)(DKFZP434P1735), complete sequence
          Length = 87118

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 127   gctaaaactgaaaagagaaatgga 150
             ||||||||||||||||||||||||
Sbjct: 53611 gctaaaactgaaaagagaaatgga 53634
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 344     gcctccgaacaaggcgaggacga 366
               |||||||||||||||||||||||
Sbjct: 1083975 gcctccgaacaaggcgaggacga 1083953
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>gb|AC010872.8| Homo sapiens BAC clone RP11-83B6 from 2, complete sequence
          Length = 189507

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 129    taaaactgaaaagagaaatggaa 151
              |||||||||||||||||||||||
Sbjct: 104438 taaaactgaaaagagaaatggaa 104416
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>emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13,
             complete sequence
          Length = 121689

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 106   tatacatcacaagattttgaagc 128
             |||||||||||||||||||||||
Sbjct: 81210 tatacatcacaagattttgaagc 81232
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>ref|XM_419584.1| PREDICTED: Gallus gallus similar to angiotensinogen (LOC421543), mRNA
          Length = 2563

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 445  tgatgggctgcagcatcaccagcaga 470
            ||||||||||||||| ||||||||||
Sbjct: 1359 tgatgggctgcagcagcaccagcaga 1334
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>emb|CR407474.1| Gallus gallus finished cDNA, clone ChEST141l17
          Length = 1169

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 445  tgatgggctgcagcatcaccagcaga 470
            ||||||||||||||| ||||||||||
Sbjct: 1096 tgatgggctgcagcagcaccagcaga 1071
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>emb|BX950558.1| Gallus gallus finished cDNA, clone ChEST562d22
          Length = 1129

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 445  tgatgggctgcagcatcaccagcaga 470
            ||||||||||||||| ||||||||||
Sbjct: 1056 tgatgggctgcagcagcaccagcaga 1031
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>gb|AC165141.4| Mus musculus BAC clone RP24-535G5 from chromosome 17, complete sequence
          Length = 187883

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 503    tgaactgcccttccttgaaatgtat 527
              |||||||||||||| ||||||||||
Sbjct: 143844 tgaactgcccttccctgaaatgtat 143868
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>gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, complete sequence
          Length = 192138

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 431    ctccgagcctagggtgatgggctgc 455
              |||||||||||||||| ||||||||
Sbjct: 178066 ctccgagcctagggtgctgggctgc 178042
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>gb|U80446.1| Caenorhabditis elegans cosmid F56A3, complete sequence
          Length = 26283

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 156   gaagaacactttttacacggc 176
             |||||||||||||||||||||
Sbjct: 13513 gaagaacactttttacacggc 13493
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>emb|CR847821.11| Zebrafish DNA sequence from clone DKEY-87I10 in linkage group 14,
              complete sequence
          Length = 167652

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    ggcaaagtgaactaatgtgag 194
              |||||||||||||||||||||
Sbjct: 167350 ggcaaagtgaactaatgtgag 167330
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>gb|AC098591.4| Homo sapiens BAC clone RP11-333E13 from 4, complete sequence
          Length = 179641

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 123    tgaagctaaaactgaaaagagaaat 147
              ||||||||||||||||| |||||||
Sbjct: 143969 tgaagctaaaactgaaaggagaaat 143945
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>emb|AL672242.12| Mouse DNA sequence from clone RP23-83P17 on chromosome 17, complete
              sequence
          Length = 222709

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 503    tgaactgcccttccttgaaatgtat 527
              |||||||||||||| ||||||||||
Sbjct: 120079 tgaactgcccttccctgaaatgtat 120055
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>gb|AY391419.1| Danio rerio differentially expressed in FDCP 6-like protein (DEF6)
            mRNA, complete cds
          Length = 2131

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  ctcttcttcctcagccagta 337
            ||||||||||||||||||||
Sbjct: 1399 ctcttcttcctcagccagta 1380
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>gb|BC054935.1| Danio rerio zgc:63721, mRNA (cDNA clone MGC:63721 IMAGE:2639122),
            complete cds
          Length = 2211

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  ctcttcttcctcagccagta 337
            ||||||||||||||||||||
Sbjct: 1478 ctcttcttcctcagccagta 1459
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>ref|NM_201040.1| Danio rerio zgc:63721 (zgc:63721), mRNA
          Length = 2211

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 318  ctcttcttcctcagccagta 337
            ||||||||||||||||||||
Sbjct: 1478 ctcttcttcctcagccagta 1459
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>gb|AF480884.1| Chimpanzee cytomegalovirus, complete genome
          Length = 241087

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    agctcgtcgtccatgtcgtc 274
              ||||||||||||||||||||
Sbjct: 204217 agctcgtcgtccatgtcgtc 204198



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   atcccgctccctcttcttcc 327
             ||||||||||||||||||||
Sbjct: 29877 atcccgctccctcttcttcc 29858
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>emb|CR626942.6| Zebrafish DNA sequence from clone DKEY-189F18 in linkage group 17,
             complete sequence
          Length = 113259

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   agaacactttttacacggca 177
             ||||||||||||||||||||
Sbjct: 29909 agaacactttttacacggca 29890
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>gb|AY083997.1| Homo sapiens E2F transcription factor (E2F6) gene, complete cds,
            alternatively spliced
          Length = 21544

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  cacagctcccattcatcaaa 576
            ||||||||||||||||||||
Sbjct: 1908 cacagctcccattcatcaaa 1927
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>emb|AJ493061.1|HSA493061 Homo sapiens E2F6 gene for transcription factor E2F6, exons 1-8
          Length = 20900

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 557 cacagctcccattcatcaaa 576
           ||||||||||||||||||||
Sbjct: 804 cacagctcccattcatcaaa 823
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>emb|BX470121.7| Zebrafish DNA sequence from clone DKEY-267G17 in linkage group 7,
            complete sequence
          Length = 97476

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  cactttttacacggcaaagt 181
            ||||||||||||||||||||
Sbjct: 3780 cactttttacacggcaaagt 3761
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>gb|AC067964.18| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-337K7, complete sequence
          Length = 219769

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 476   tacagtttgggcatagcaaagtcg 499
             |||||| |||||||||||||||||
Sbjct: 90975 tacagtgtgggcatagcaaagtcg 90952
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>gb|AC077689.9| Mus Musculus Strain C57BL6/J Chromosome 5 RP23-301H20, complete sequence
          Length = 213462

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 476    tacagtttgggcatagcaaagtcg 499
              |||||| |||||||||||||||||
Sbjct: 195536 tacagtgtgggcatagcaaagtcg 195513
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    taaaactgaaaagagaaatg 148
              ||||||||||||||||||||
Sbjct: 222911 taaaactgaaaagagaaatg 222930
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>gb|AC182739.1| Gasterosteus aculeatus clone VMRC26-26K03, complete sequence
          Length = 171340

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 359 gaggacgatgataacggaag 378
           ||||||||||||||||||||
Sbjct: 538 gaggacgatgataacggaag 557
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>gb|AC008794.8| Homo sapiens chromosome 19 clone CTD-2050I18, complete sequence
          Length = 131972

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aactgaaaagagaaatggaa 151
             ||||||||||||||||||||
Sbjct: 79574 aactgaaaagagaaatggaa 79555
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>gb|AC099344.4| Homo sapiens BAC clone RP11-427E2 from 2, complete sequence
          Length = 135598

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 557    cacagctcccattcatcaaa 576
              ||||||||||||||||||||
Sbjct: 132463 cacagctcccattcatcaaa 132444
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>gb|AC119793.3| Homo sapiens 12 BAC RP11-390F17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 73625

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   ctatctcagagttcattgct 247
             ||||||||||||||||||||
Sbjct: 11938 ctatctcagagttcattgct 11919
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>gb|AF150911.1|AF150911 Greya punctiferella cytochrome oxidase subunit I (COI) gene, partial
            cds; tRNA-Leu gene, complete sequence; and cytochrome
            oxidase subunit II (COII) gene, partial cds;
            mitochondrial genes for mitochondrial products
          Length = 2104

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 393  attatgatcacagcaacagatgtc 416
            ||||| ||||||||||||||||||
Sbjct: 2036 attataatcacagcaacagatgtc 2059
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>emb|BX004884.10| Zebrafish DNA sequence from clone DKEY-6N6 in linkage group 8, complete
             sequence
          Length = 225442

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ctcttcttcctcagccagta 337
             ||||||||||||||||||||
Sbjct: 63704 ctcttcttcctcagccagta 63723
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>gb|L22234.1|GYAMTCYTBU Greya enchrysa mitochondrial cytochrome oxidase subunit I (3' end),
           transfer RNA-Leu, and cytochrome oxidase subunit II, (5'
           end)
          Length = 765

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 392 tattatgatcacagcaacagatgt 415
           |||||| |||||||||||||||||
Sbjct: 678 tattataatcacagcaacagatgt 701
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>gb|L22227.1|GYAMTCYTBT Greya punctiferella mitochondrial cytochrome oxidase subunit I (3'
           end), transfer RNA-Leu, and cytochrome oxidase subunit
           II, (5' end)
          Length = 764

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 393 attatgatcacagcaacagatgtc 416
           ||||| ||||||||||||||||||
Sbjct: 679 attataatcacagcaacagatgtc 702


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,875,396
Number of Sequences: 3902068
Number of extensions: 5875396
Number of successful extensions: 129060
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128850
Number of HSP's gapped (non-prelim): 193
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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