>ref|NM_188144.1| Oryza sativa (japonica cultivar-group), Ozsa8576 predicted mRNA
          Length = 1248

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
            |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 1189 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 1131

              
Query: 258  tt 259
            ||
Sbjct: 1130 tt 1129

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                            
Query: 198      ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
                |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 10006276 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 10006218

                  
Query: 258      tt 259
                ||
Sbjct: 10006217 tt 10006216

>dbj|AP003103.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1085F09
          Length = 132713

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                         
Query: 198   ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
             |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 86558 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 86500

               
Query: 258   tt 259
             ||
Sbjct: 86499 tt 86498

>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0003H10
          Length = 142418

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                          
Query: 198    ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
              |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 142042 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 141984

                
Query: 258    tt 259
              ||
Sbjct: 141983 tt 141982

>dbj|AK069448.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020G14, full
           insert sequence
          Length = 890

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                       
Query: 198 ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
           |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 425 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 367

             
Query: 258 tt 259
           ||
Sbjct: 366 tt 365

>dbj|AK064952.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A01, full
            insert sequence
          Length = 2351

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
            |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 1907 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 1849

              
Query: 258  tt 259
            ||
Sbjct: 1848 tt 1847

>dbj|AP002804.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0021A04
          Length = 50487

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                         
Query: 198   ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
             |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 33833 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 33775

               
Query: 258   tt 259
             ||
Sbjct: 33774 tt 33773

>dbj|AP002862.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0036E02
          Length = 145931

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 55/62 (88%), Gaps = 1/62 (1%)
 Strand = Plus / Minus

                                                                          
Query: 198    ggagcttccttattccaccgtagaatccatcgctctcgtttgccttcttccctgtggtcc 257
              |||||||||| |||||||||||||| || |||| |||  ||||| |||||||||||||||
Sbjct: 100769 ggagcttcctgattccaccgtagaaaccgtcgccctc-attgccctcttccctgtggtcc 100711

                
Query: 258    tt 259
              ||
Sbjct: 100710 tt 100709

>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 230    ctctcgtttgccttcttccctgtggtcctttc 261
              |||| ||||||||||||||||||| |||||||
Sbjct: 667524 ctcttgtttgccttcttccctgtgctcctttc 667493

>gb|AC087180.2| Sus scrofa clone RP44-338P10, complete sequence
          Length = 117818

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 230   ctctcgtttgccttcttccctgtggtcctttc 261
             |||| ||||||||||||||||||| |||||||
Sbjct: 89886 ctcttgtttgccttcttccctgtgctcctttc 89855

>ref|XM_456588.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A06138g)
            partial mRNA
          Length = 2949

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 103  ttgattgaggagtcaataacg 123
            |||||||||||||||||||||
Sbjct: 2521 ttgattgaggagtcaataacg 2501

>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
              hansenii
          Length = 1249565

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 103    ttgattgaggagtcaataacg 123
              |||||||||||||||||||||
Sbjct: 497272 ttgattgaggagtcaataacg 497252

>gb|AC073325.9| Homo sapiens BAC clone RP11-351I12 from 7, complete sequence
          Length = 168872

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    gagggtgtggctgatggtgg 58
             ||||||||||||||||||||
Sbjct: 65760 gagggtgtggctgatggtgg 65779

>gb|AC145090.1| Pan troglodytes BAC clone RP43-2G11 from 7, complete sequence
          Length = 173759

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   gagggtgtggctgatggtgg 58
            ||||||||||||||||||||
Sbjct: 4967 gagggtgtggctgatggtgg 4986


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,741,659
Number of Sequences: 3902068
Number of extensions: 1741659
Number of successful extensions: 27783
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 27742
Number of HSP's gapped (non-prelim): 33
length of query: 268
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 246
effective length of database: 17,147,199,772
effective search space: 4218211143912
effective search space used: 4218211143912
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)