ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1m05 |
|---|---|
| Clone Library Name | barley_pub |
>INV6_ORYSA (Q56UD0) Beta-fructofuranosidase, insoluble isoenzyme 6 precursor| (EC 3.2.1.26) (Sucrose hydrolase 6) (Invertase 6) (Cell wall beta-fructosidase 6) (OsCIN6) Length = 596 Score = 66.2 bits (160), Expect(3) = 6e-21 Identities = 31/46 (67%), Positives = 39/46 (84%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P +G FVD+DIE + +ISLRTL+DHS+VESFGGGGRTC+TA+ P Sbjct: 497 PSHGGFVDIDIE-KDRAISLRTLIDHSIVESFGGGGRTCMTARVYP 541 Score = 37.4 bits (85), Expect(3) = 6e-21 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = -3 Query: 456 VKVSSLDAWEMATATVNVLPDGLIA 382 VKVS L+AWE+ATA+VN DGLI+ Sbjct: 561 VKVSKLEAWELATASVNAGDDGLIS 585 Score = 37.0 bits (84), Expect(3) = 6e-21 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 VYP+HV G+SHLYVFNN Sbjct: 539 VYPEHVATGSSHLYVFNN 556
>INV7_ORYSA (Q56UC9) Beta-fructofuranosidase, insoluble isoenzyme 7 precursor| (EC 3.2.1.26) (Sucrose hydrolase 7) (Invertase 7) (Cell wall beta-fructosidase 7) (OsCIN7) Length = 596 Score = 67.4 bits (163), Expect(3) = 8e-20 Identities = 33/46 (71%), Positives = 37/46 (80%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P YG FVDMDI+ +ISLRTL+DHSVVESFGGGGR CITA+ P Sbjct: 493 PAYGGFVDMDIDDHK-TISLRTLIDHSVVESFGGGGRACITARVYP 537 Score = 37.0 bits (84), Expect(3) = 8e-20 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP+HV +SHLYVFNNG Sbjct: 535 VYPEHVATSSSHLYVFNNG 553 Score = 32.3 bits (72), Expect(3) = 8e-20 Identities = 13/19 (68%), Positives = 18/19 (94%) Frame = -3 Query: 456 VKVSSLDAWEMATATVNVL 400 VKV+ L+AW++ATATVNV+ Sbjct: 557 VKVAKLEAWDLATATVNVV 575
>INV5_ORYSA (Q56UD1) Beta-fructofuranosidase, insoluble isoenzyme 5 (EC| 3.2.1.26) (Sucrose hydrolase 5) (Invertase 5) (Cell wall beta-fructosidase 5) (OsCIN5) (Fragment) Length = 526 Score = 62.4 bits (150), Expect(3) = 9e-18 Identities = 29/44 (65%), Positives = 36/44 (81%) Frame = -1 Query: 647 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 YG FVD+DI+ + SISLRTL+DHS++ESFGGGGR CIT + P Sbjct: 437 YGGFVDVDIQ-KDKSISLRTLIDHSMIESFGGGGRACITTRVYP 479 Score = 35.4 bits (80), Expect(3) = 9e-18 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP+H +SHLYVFNNG Sbjct: 477 VYPEHAATSSSHLYVFNNG 495 Score = 32.0 bits (71), Expect(3) = 9e-18 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -3 Query: 456 VKVSSLDAWEMATATVN 406 V VS L+AWEMATATVN Sbjct: 499 VNVSKLEAWEMATATVN 515
>INV4_ORYSA (Q5JJV0) Beta-fructofuranosidase, insoluble isoenzyme 4 precursor| (EC 3.2.1.26) (Sucrose hydrolase 4) (Invertase 4) (Cell wall beta-fructosidase 4) (OsCIN4) Length = 590 Score = 56.2 bits (134), Expect(3) = 4e-13 Identities = 27/47 (57%), Positives = 33/47 (70%) Frame = -1 Query: 656 SPPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 +P YG F + D+E + ISLRTL+D S VESFGGGGR CI A+ P Sbjct: 505 TPAYGGFFEYDLEKEK-KISLRTLIDRSAVESFGGGGRACIMARVYP 550 Score = 31.2 bits (69), Expect(3) = 4e-13 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP VV+G +H+Y FNNG Sbjct: 548 VYPAAVVDGATHMYAFNNG 566 Score = 26.2 bits (56), Expect(3) = 4e-13 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -3 Query: 456 VKVSSLDAWEMATATVNV 403 VKVS L AW M A VNV Sbjct: 570 VKVSQLKAWSMTRAQVNV 587
>INV1_ORYSA (Q6EU76) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) (OsCIN1) Length = 577 Score = 54.3 bits (129), Expect(3) = 6e-11 Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P + FVD DI + G ISLR+L+D SVVESFG GG+TCI ++ P Sbjct: 496 PTFAGFVDTDISS--GKISLRSLIDRSVVESFGAGGKTCILSRVYP 539 Score = 30.0 bits (66), Expect(3) = 6e-11 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP + +HLYVFNNG Sbjct: 537 VYPSMAIGDKAHLYVFNNG 555 Score = 21.9 bits (45), Expect(3) = 6e-11 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -3 Query: 456 VKVSSLDAWEMATATVN 406 +K+S L AWEM +N Sbjct: 559 IKISHLKAWEMKKPLMN 575
>INV2_DAUCA (Q39692) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) Length = 592 Score = 58.2 bits (139), Expect(2) = 7e-11 Identities = 30/73 (41%), Positives = 43/73 (58%) Frame = -1 Query: 734 FRQNDKVQGAHVHRPSRSRAPETACTSPPYGAFVDMDIEAQGGSISLRTLVDHSVVESFG 555 F+ DK++ RS PP+ +VD+D+ + ISLR+L+D+SVVESFG Sbjct: 483 FKTKDKLKVLMCSDAKRSSTTAEGLYKPPFAGYVDVDLSDK--KISLRSLIDNSVVESFG 540 Query: 554 GGGRTCITAKGVP 516 GRTCIT++ P Sbjct: 541 AHGRTCITSRVYP 553 Score = 28.5 bits (62), Expect(2) = 7e-11 Identities = 10/19 (52%), Positives = 14/19 (73%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP + N+H++VFNNG Sbjct: 551 VYPKIAIYNNAHVFVFNNG 569
>INV3_ORYSA (Q56UD3) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) (OsCIN3) Length = 586 Score = 56.2 bits (134), Expect(2) = 6e-10 Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 4/77 (5%) Frame = -1 Query: 734 FRQNDKVQGAHV----HRPSRSRAPETACTSPPYGAFVDMDIEAQGGSISLRTLVDHSVV 567 F+ ND +HV + P+RS + E+ P + FVD+DI A+ I+LRTL+DHSVV Sbjct: 476 FKANDS---SHVVLMCNDPTRS-SYESKIYRPTFAGFVDVDI-AKNKQIALRTLIDHSVV 530 Query: 566 ESFGGGGRTCITAKGVP 516 ESFG G+TCI + P Sbjct: 531 ESFGARGKTCILTRVYP 547 Score = 30.4 bits (67), Expect = 5.9 Identities = 22/85 (25%), Positives = 34/85 (40%) Frame = -2 Query: 721 TKYKVLMCTDPLEVEHQRRRVQARRTGPSWTWTSRRKGAASRSEHXXXXXXXXXXXXXXX 542 + + VLMC DP ++ + + G ++ K A R+ Sbjct: 481 SSHVVLMCNDPTRSSYESKIYRPTFAGFVDVDIAKNKQIALRT--LIDHSVVESFGARGK 538 Query: 541 XXXXXRVYPDHVVNGNSHLYVFNNG 467 RVYP V ++HL+VFNNG Sbjct: 539 TCILTRVYPRKAVGDDAHLFVFNNG 563 Score = 27.3 bits (59), Expect(2) = 6e-10 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = -3 Query: 456 VKVSSLDAWEMATATVN 406 VKV++LDAWEM T +N Sbjct: 567 VKVTNLDAWEMKTPKMN 583
>INVA_MAIZE (P49174) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) Length = 590 Score = 53.1 bits (126), Expect(2) = 7e-10 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P + FVD DI + G I+LR+L+D SVVESFG GG+TCI ++ P Sbjct: 509 PTFAGFVDADISS--GKITLRSLIDRSVVESFGAGGKTCILSRVYP 552 Score = 30.0 bits (66), Expect(2) = 7e-10 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP V ++HLYVFNNG Sbjct: 550 VYPSIAVGKDAHLYVFNNG 568
>INV1_DAUCA (P26792) Beta-fructofuranosidase, insoluble isoenzyme 1 precursor| (EC 3.2.1.26) (Sucrose hydrolase 1) (Invertase 1) (Cell wall beta-fructosidase 1) Length = 592 Score = 50.1 bits (118), Expect(2) = 4e-09 Identities = 24/46 (52%), Positives = 34/46 (73%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P + FVD+D+ A ISLR+L+D+SVVESFG G+TCI+++ P Sbjct: 511 PSFAGFVDVDL-ATDKKISLRSLIDNSVVESFGAKGKTCISSRVYP 555 Score = 30.8 bits (68), Expect(2) = 4e-09 Identities = 13/19 (68%), Positives = 14/19 (73%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP V N+HLYVFNNG Sbjct: 553 VYPTLAVYENAHLYVFNNG 571
>INV1_PEA (Q43089) Beta-fructofuranosidase, cell wall isozyme precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Acid invertase) Length = 555 Score = 55.5 bits (132), Expect = 2e-07 Identities = 27/44 (61%), Positives = 33/44 (75%) Frame = -1 Query: 647 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 YG FVD+D + +SLRTL+DHSVVESFGG GR C+TA+ P Sbjct: 498 YGTFVDVDPLHE--KLSLRTLIDHSVVESFGGEGRACVTARVYP 539
>INV2_ORYSA (Q56UD4) Beta-fructofuranosidase, insoluble isoenzyme 2 precursor| (EC 3.2.1.26) (Sucrose hydrolase 2) (Invertase 2) (Cell wall beta-fructosidase 2) (OsCIN2) Length = 598 Score = 51.6 bits (122), Expect(2) = 6e-07 Identities = 25/46 (54%), Positives = 31/46 (67%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P + FVD DI G ISLR+L+D SVVESFG GG+ CI ++ P Sbjct: 516 PTFAGFVDTDIT--NGKISLRSLIDRSVVESFGAGGKACILSRVYP 559 Score = 21.6 bits (44), Expect(2) = 6e-07 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -3 Query: 456 VKVSSLDAWEM 424 +KVS L AWEM Sbjct: 579 IKVSQLTAWEM 589
>INVA_VICFA (Q43857) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 642 Score = 48.5 bits (114), Expect(2) = 1e-06 Identities = 24/44 (54%), Positives = 31/44 (70%) Frame = -1 Query: 647 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 YG+ V + +G +SLR LVDHS+VESF GGRTCIT++ P Sbjct: 555 YGSVVPV---LEGEKLSLRILVDHSIVESFAQGGRTCITSRVYP 595 Score = 23.5 bits (49), Expect(2) = 1e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 VYP + G + L++FNN Sbjct: 593 VYPTRAIYGAARLFLFNN 610
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 39.7 bits (91), Expect(3) = 1e-06 Identities = 20/46 (43%), Positives = 31/46 (67%) Frame = -1 Query: 653 PPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 P + FVD+D+ + ISLR+L+D+SVVESFG + I+++ P Sbjct: 503 PSFRGFVDVDLSDK--KISLRSLIDNSVVESFGAQRKNLISSRVYP 546 Score = 29.6 bits (65), Expect(3) = 1e-06 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNNG 467 VYP + N+HL+VFNNG Sbjct: 544 VYPTLAIYNNAHLFVFNNG 562 Score = 21.6 bits (44), Expect(3) = 1e-06 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = -3 Query: 732 QAERQSTRCSCAPTLSKSSTRDGVYKPA 649 +AE Q + +SS +G+YKP+ Sbjct: 477 KAEDQKLKVLMCSDAKRSSLAEGLYKPS 504
>INVA_PHAVU (O24509) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 651 Score = 46.6 bits (109), Expect(2) = 6e-06 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -1 Query: 614 QGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 +G SLR LVDHS+VESF GGRTC+T++ P Sbjct: 573 EGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYP 605 Score = 23.1 bits (48), Expect(2) = 6e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 VYP + G + L++FNN Sbjct: 603 VYPTKAIYGAARLFLFNN 620
>INVA_PHAAU (P29001) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) [Contains: Acid beta-fructofuranosidase 30 kDa subunit; Acid beta-fructofuranosidase 38 kDa subunit] Length = 649 Score = 46.2 bits (108), Expect(2) = 8e-06 Identities = 20/33 (60%), Positives = 25/33 (75%) Frame = -1 Query: 614 QGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 +G SLR LVDHS+VESF GGRTC+T++ P Sbjct: 571 KGEKFSLRMLVDHSIVESFAQGGRTCVTSRVYP 603 Score = 23.1 bits (48), Expect(2) = 8e-06 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 VYP + G + L++FNN Sbjct: 601 VYPTKAIYGAARLFLFNN 618
>INV1_MAIZE (P49175) Beta-fructofuranosidase 1 precursor (EC 3.2.1.26) (Sucrose| 1) (Invertase 1) Length = 670 Score = 47.4 bits (111), Expect(2) = 2e-05 Identities = 23/44 (52%), Positives = 31/44 (70%) Frame = -1 Query: 647 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 YG+ V + G ++S+R LVDHS+VESF GGRTCIT++ P Sbjct: 584 YGSLVPV---LDGENLSVRILVDHSIVESFAQGGRTCITSRVYP 624 Score = 20.8 bits (42), Expect(2) = 2e-05 Identities = 6/18 (33%), Positives = 12/18 (66%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 VYP + ++ +++FNN Sbjct: 622 VYPTRAIYDSARVFLFNN 639
>INVA_LYCES (P29000) Acid beta-fructofuranosidase precursor (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) (AI) (Vacuolar invertase) Length = 636 Score = 40.4 bits (93), Expect(2) = 2e-05 Identities = 22/44 (50%), Positives = 28/44 (63%) Frame = -1 Query: 647 YGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 YG+ V + G S+R LVDHS+VESF GGRT IT++ P Sbjct: 553 YGSSVPV---LDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYP 593 Score = 27.3 bits (59), Expect(2) = 2e-05 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 +YP VNG + L+VFNN Sbjct: 591 IYPTKAVNGAARLFVFNN 608
>INV1_CAPAN (P93761) Acid beta-fructofuranosidase AIV-18 (EC 3.2.1.26) (Acid| sucrose hydrolase) (Acid invertase) Length = 640 Score = 38.9 bits (89), Expect(2) = 6e-05 Identities = 25/56 (44%), Positives = 31/56 (55%) Frame = -1 Query: 683 SRAPETACTSPPYGAFVDMDIEAQGGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 S AP A YG+ V + G +R LVDHS+VESF GGRT IT++ P Sbjct: 547 SEAPGVA--KQVYGSSVPV---LDGEKHRMRLLVDHSIVESFAQGGRTVITSRIYP 597 Score = 27.3 bits (59), Expect(2) = 6e-05 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 Query: 523 VYPDHVVNGNSHLYVFNN 470 +YP VNG + L+VFNN Sbjct: 595 IYPTKAVNGAARLFVFNN 612
>INVB_DAUCA (P80065) Beta-fructofuranosidase, soluble isoenzyme I precursor (EC| 3.2.1.26) (Sucrose hydrolase) (Invertase) (Saccharase) Length = 661 Score = 43.9 bits (102), Expect = 5e-04 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = -1 Query: 611 GGSISLRTLVDHSVVESFGGGGRTCITAKGVP 516 G S+S+R LVDHS+VESF GGRT IT++ P Sbjct: 587 GESLSMRLLVDHSIVESFAQGGRTVITSRVYP 618
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 31.6 bits (70), Expect = 2.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +1 Query: 550 PPPKLSTTEWSTSVLSEMLPPCASMSMSTKAPY 648 PPP ST+ +ST + M+P +S + +T +PY Sbjct: 190 PPPASSTSSFSTITNTSMIPSSSSFTTTTGSPY 222
>INVO_TARBA (P24711) Involucrin| Length = 387 Score = 30.0 bits (66), Expect = 7.7 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +1 Query: 259 PEPQLGRQIQSAVE--IHNGHPSTERKPSSRILIGLSSAHRARRDQPVGEHVH-GRRRHL 429 PE QLGR+ Q E +H G ++KP + AH ++ +P G+ VH G+++ Sbjct: 78 PELQLGRKQQEPQEQEVHPG--KQQQKPQEQ------EAHLGKKQEPQGQEVHLGKQQQK 129 Query: 430 PRVEAGHL 453 + + HL Sbjct: 130 TQEQEVHL 137 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,596,848 Number of Sequences: 219361 Number of extensions: 2052429 Number of successful extensions: 5650 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5433 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5642 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7649585595 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
