Clone Name | rbasd1m02 |
---|---|
Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 pre... | 32 | 1.8 | 2 | ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precu... | 32 | 1.8 | 3 | TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylam... | 30 | 5.2 | 4 | FPS_DROME (P18106) Tyrosine-protein kinase Fps85D (EC 2.7.10.2) ... | 30 | 8.8 |
---|
>ERBB2_MESAU (Q60553) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) Length = 1254 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/75 (30%), Positives = 29/75 (38%) Frame = +2 Query: 206 APLFREPAPFVLLLPNGTQEYTGAESSSPVPSFGTSTCLTPGVSFTGPDLICTYRPLGEA 385 +PL R L LP T Y + SP P + + P T + RP G Sbjct: 1107 SPLQRYSEDPTLPLPTETDGYVAPLACSPQPEYVNQPEVRPQPPLTPEGPLPPVRPAGAT 1166 Query: 386 LELPRTALPTLLSVV 430 LE P+T P VV Sbjct: 1167 LERPKTLSPGKNGVV 1181
>ERBB2_RAT (P06494) Receptor tyrosine-protein kinase erbB-2 precursor (EC| 2.7.10.1) (p185erbB2) (C-erbB-2) (NEU proto-oncogene) (Epidermal growth factor receptor-related protein) Length = 1257 Score = 32.0 bits (71), Expect = 1.8 Identities = 23/75 (30%), Positives = 30/75 (40%) Frame = +2 Query: 206 APLFREPAPFVLLLPNGTQEYTGAESSSPVPSFGTSTCLTPGVSFTGPDLICTYRPLGEA 385 +PL R L LP T Y + SP P + + + P T + RP G Sbjct: 1109 SPLQRYSEDPTLPLPPETDGYVAPLACSPQPEYVNQSEVQPQPPLTPEGPLPPVRPAGAT 1168 Query: 386 LELPRTALPTLLSVV 430 LE P+T P VV Sbjct: 1169 LERPKTLSPGKNGVV 1183
>TRZA_RHOCO (Q52725) S-triazine hydrolase (EC 3.8.1.-) (N-ethylammeline| chlorohydrolase) Length = 476 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/85 (27%), Positives = 36/85 (42%) Frame = +2 Query: 224 PAPFVLLLPNGTQEYTGAESSSPVPSFGTSTCLTPGVSFTGPDLICTYRPLGEALELPRT 403 P PFVL P + T ++SP P PG FT + Y + + PR Sbjct: 111 PKPFVLASPLSSTTRTSDPTTSPAPG-------PPGSPFTDAGIRAIYARM--YFDAPRA 161 Query: 404 ALPTLLSVVLAEKVASLMLLEGAWT 478 L L++ + A+ ++ + E A T Sbjct: 162 ELEELVATIHAKAPGAVRMDESAST 186
>FPS_DROME (P18106) Tyrosine-protein kinase Fps85D (EC 2.7.10.2) (dFer)| Length = 1325 Score = 29.6 bits (65), Expect = 8.8 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 159 RFMQLQPSESSTKSIMLLCSENLHHLCSYFP-TEHRSTQARNRHHLSHRLAPVHALPQE 332 RF +LQP S S+ ++ N Y P T HR QA + H+L +A P + Sbjct: 477 RFNKLQPRSQSLGSLSVIRDGNGPSPARYEPITNHRLRQAASVHYLGEEIATSSTNPPD 535 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,832,129 Number of Sequences: 219361 Number of extensions: 2163555 Number of successful extensions: 4994 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4795 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4991 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)