ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1l23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192422.1| Oryza sativa (japonica cultivar-group), predic... 474 e-130
2dbj|AK058593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
5ref|NM_102820.1| Arabidopsis thaliana ARPC2A/DIS2; structural mo... 50 0.010
6emb|BX816746.1|CNS0AAKR Arabidopsis thaliana Full-length cDNA Co... 50 0.010
7gb|BT005308.1| Arabidopsis thaliana At1g30825 mRNA, complete cds 50 0.010
8gb|AY084256.1| Arabidopsis thaliana clone 101351 mRNA, complete ... 50 0.010
9gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana... 50 0.010
10dbj|AK118475.1| Arabidopsis thaliana At1g30825 mRNA for unknown ... 50 0.010
11gb|AE006889.1| Sulfolobus solfataricus P2 section 248 of 272 of ... 46 0.15
12ref|XM_545514.2| PREDICTED: Canis familiaris similar to kelch-li... 42 2.4
13gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome... 42 2.4
14emb|AL365396.10| Human DNA sequence from clone RP11-338N12 on ch... 42 2.4
15dbj|BS000221.1| Pan troglodytes chromosome 22 clone:PTB-061I08, ... 42 2.4
16dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 2.4
17dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 42 2.4
18gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Canc... 40 9.5
19gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, co... 40 9.5
20gb|AE017308.1| Mycoplasma mobile 163K complete genome 40 9.5
21gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 9.5
22gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 40 9.5
23emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chr... 40 9.5
24gb|AC132442.3| Mus musculus BAC clone RP23-240K23 from chromosom... 40 9.5
25gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome... 40 9.5
26emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in... 40 9.5
27emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chr... 40 9.5
28emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chr... 40 9.5
29emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3... 40 9.5
30gb|AF381049.1| Synechococcus sp. PCC 7002 hypothetical protein (... 40 9.5
31emb|CR384090.7| Zebrafish DNA sequence from clone CH211-142J15 i... 40 9.5
32gb|AC018559.31| Mus musculus strain 129/Sv chromosome 6 clone ct... 40 9.5
33emb|CR385029.5| Opossum DNA sequence from clone XX-191G11, compl... 40 9.5
34gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Libra... 40 9.5
35emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in ... 40 9.5
36gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, co... 40 9.5
37ref|NM_164696.1| Drosophila melanogaster CG31635-RA (CG31635), mRNA 40 9.5
38gb|AD001502.1|CH19F21246 Homo sapiens DNA from chromosome 19-cos... 40 9.5
39gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, comple... 40 9.5
40gb|AY060875.1| Drosophila melanogaster GM03875 full length cDNA 40 9.5
41emb|BX470132.6| Zebrafish DNA sequence from clone DKEY-202L16 in... 40 9.5
42gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Canc... 40 9.5
43dbj|AK013698.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 9.5
44gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, r... 40 9.5
45gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Can... 40 9.5
46dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 9.5
47emb|BX276095.7| Zebrafish DNA sequence from clone CH211-225H17, ... 40 9.5
48emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, ... 40 9.5
49gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, comple... 40 9.5
50gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Can... 40 9.5
51gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23... 40 9.5
52emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, c... 40 9.5
53gb|AC004301.1|AC004301 Drosophila melanogaster DNA sequence (P1 ... 40 9.5 
>ref|NM_192422.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1287

 Score =  474 bits (239), Expect = e-130
 Identities = 405/458 (88%), Gaps = 3/458 (0%)
 Strand = Plus / Minus

                                                                        
Query: 233  accaacttcttcagcttctctgcatccgatttagcacggtccaaagcctggatcagagac 292
            ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| | |
Sbjct: 1181 accaacttcttcaacttctctgcatcagattttgcacgatccaaagcctggatcagcgtc 1122

                                                                        
Query: 293  tcaactctacgcctcatcctagtgtgcatgaatccttcagaacactttacatggtagctt 352
            ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1121 tcaactctacgtctcatcctggtgtgcatgaatccttcagaacacttcacatggtagctt 1062

                                                                        
Query: 353  acataagcatgaaaggttaacaaactccaaactgttttgtctagctttctaccctcaaca 412
            |||||||||||||| || ||||||||||||||||||||||| |  ||| |||||||||||
Sbjct: 1061 acataagcatgaaaagtcaacaaactccaaactgttttgtccaattttttaccctcaaca 1002

                                                                        
Query: 413  tgccgagggaaaacaacaaaagtaacaaaaccagcgtttgcatcaagtgcatcagcattc 472
            ||||| |||||||||||||||||||||||||| || |||||||  |||||||||| |   
Sbjct: 1001 tgccgcgggaaaacaacaaaagtaacaaaaccggcatttgcatttagtgcatcagaaggt 942

                                                                        
Query: 473  acgccttttaactcaagaggtggtactggagaccacatacacgaaggagcattattaagt 532
            || ||||||||||||||||||||||||||||||||||  || ||||| || || ||||| 
Sbjct: 941  actccttttaactcaagaggtggtactggagaccacaagcaggaaggggcgttgttaaga 882

                                                                        
Query: 533  gcagcagtccgccttgcttctacaaattcctgcaaaaacgaagttgctaggacaatatca 592
            ||   ||||||||||||||| ||||||||||||| ||| ||||||||||  || ||||||
Sbjct: 881  gcgctagtccgccttgcttccacaaattcctgcagaaaggaagttgctaaaactatatca 822

                                                                        
Query: 593  attgaatcctggaacctcattgggtacacaaccgtaactttgtctgcctggggagcaagg 652
            || ||||||||||||||||| ||||| || || ||||||||||||||||||||||||| |
Sbjct: 821  atggaatcctggaacctcatagggtatactactgtaactttgtctgcctggggagcaacg 762

                                                  
Query: 653  gaagaagggattcattagggacggtgaacaagggcaac 690
              | || |||||||||| |||||||||||||| |||||
Sbjct: 761  --aaaaaggattcatta-ggacggtgaacaagagcaac 727
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>dbj|AK058593.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G12, full
           insert sequence
          Length = 610

 Score =  202 bits (102), Expect = 1e-48
 Identities = 135/146 (92%)
 Strand = Plus / Minus

                                                                       
Query: 233 accaacttcttcagcttctctgcatccgatttagcacggtccaaagcctggatcagagac 292
           ||||||||||||| |||||||||||| ||||| ||||| ||||||||||||||||| | |
Sbjct: 146 accaacttcttcaacttctctgcatcagattttgcacgatccaaagcctggatcagcgtc 87

                                                                       
Query: 293 tcaactctacgcctcatcctagtgtgcatgaatccttcagaacactttacatggtagctt 352
           ||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 86  tcaactctacgtctcatcctggtgtgcatgaatccttcagaacacttcacatggtagctt 27

                                     
Query: 353 acataagcatgaaaggttaacaaact 378
           |||||||||||||| || ||||||||
Sbjct: 26  acataagcatgaaaagtcaacaaact 1



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                          
Query: 3   aatatcctcccggnaacaaacaaacaagcga 33
           ||||||||||||| || ||| ||||||||||
Sbjct: 325 aatatcctcccggaaaaaaagaaacaagcga 295
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                            
Query: 341      acatggtagcttacataagcatgaaaggttaacaaactccaaactgttttgtctagcttt 400
                |||||||||||||||||||||||||| || ||||||||||||||||||||||| |  |||
Sbjct: 26523574 acatggtagcttacataagcatgaaaagtcaacaaactccaaactgttttgtccaatttt 26523515

                                             
Query: 401      ctaccctcaacatgccgagggaaaacaac 429
                 |||||||||||||||| |||||||||||
Sbjct: 26523514 ttaccctcaacatgccgcgggaaaacaac 26523486



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/135 (85%)
 Strand = Plus / Minus

                                                                            
Query: 429      caaaagtaacaaaaccagcgtttgcatcaagtgcatcagcattcacgccttttaactcaa 488
                |||||||||||||||| || |||||||  |||||||||| |   || |||||||||||||
Sbjct: 26523403 caaaagtaacaaaaccggcatttgcatttagtgcatcagaaggtactccttttaactcaa 26523344

                                                                            
Query: 489      gaggtggtactggagaccacatacacgaaggagcattattaagtgcagcagtccgccttg 548
                |||||||||||||||||||||  || ||||| || || ||||| ||   |||||||||||
Sbjct: 26523343 gaggtggtactggagaccacaagcaggaaggggcgttgttaagagcgctagtccgccttg 26523284

                               
Query: 549      cttctacaaattcct 563
                |||| ||||||||||
Sbjct: 26523283 cttccacaaattcct 26523269



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                            
Query: 279      cctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttcagaacact 338
                |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 26524245 cctggatcagcgtctcaactctacgtctcatcctggtgtgcatgaatccttcagaacact 26524186



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 556      aaattcctgcaaaaacgaagttgctaggacaatatcaattgaatcctggaacctcattgg 615
                |||| |||||| ||| ||||||||||  || |||||||| ||||||||||||||||| ||
Sbjct: 26522987 aaatacctgcagaaaggaagttgctaaaactatatcaatggaatcctggaacctcatagg 26522928

                                           
Query: 616      gtacacaaccgtaactttgtctgcctg 642
                ||| || || |||||||||||||||||
Sbjct: 26522927 gtatactactgtaactttgtctgcctg 26522901



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 233      accaacttcttcagcttctctgcatccgatttagcacggtccaaagcctg 282
                ||||||||||||| |||||||||||| ||||| ||||| |||||||||||
Sbjct: 26524772 accaacttcttcaacttctctgcatcagattttgcacgatccaaagcctg 26524723



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                               
Query: 3        aatatcctcccggnaacaaacaaacaagcga 33
                ||||||||||||| || ||| ||||||||||
Sbjct: 26525021 aatatcctcccggaaaaaaagaaacaagcga 26524991
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>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBb0006H05
          Length = 154821

 Score =  121 bits (61), Expect = 3e-24
 Identities = 82/89 (92%)
 Strand = Plus / Minus

                                                                          
Query: 341    acatggtagcttacataagcatgaaaggttaacaaactccaaactgttttgtctagcttt 400
              |||||||||||||||||||||||||| || ||||||||||||||||||||||| |  |||
Sbjct: 132193 acatggtagcttacataagcatgaaaagtcaacaaactccaaactgttttgtccaatttt 132134

                                           
Query: 401    ctaccctcaacatgccgagggaaaacaac 429
               |||||||||||||||| |||||||||||
Sbjct: 132133 ttaccctcaacatgccgcgggaaaacaac 132105



 Score =  109 bits (55), Expect = 1e-20
 Identities = 115/135 (85%)
 Strand = Plus / Minus

                                                                          
Query: 429    caaaagtaacaaaaccagcgtttgcatcaagtgcatcagcattcacgccttttaactcaa 488
              |||||||||||||||| || |||||||  |||||||||| |   || |||||||||||||
Sbjct: 132022 caaaagtaacaaaaccggcatttgcatttagtgcatcagaaggtactccttttaactcaa 131963

                                                                          
Query: 489    gaggtggtactggagaccacatacacgaaggagcattattaagtgcagcagtccgccttg 548
              |||||||||||||||||||||  || ||||| || || ||||| ||   |||||||||||
Sbjct: 131962 gaggtggtactggagaccacaagcaggaaggggcgttgttaagagcgctagtccgccttg 131903

                             
Query: 549    cttctacaaattcct 563
              |||| ||||||||||
Sbjct: 131902 cttccacaaattcct 131888



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 56/60 (93%)
 Strand = Plus / Minus

                                                                          
Query: 279    cctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttcagaacact 338
              |||||||||| | |||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 132864 cctggatcagcgtctcaactctacgtctcatcctggtgtgcatgaatccttcagaacact 132805



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                          
Query: 556    aaattcctgcaaaaacgaagttgctaggacaatatcaattgaatcctggaacctcattgg 615
              |||| |||||| ||| ||||||||||  || |||||||| ||||||||||||||||| ||
Sbjct: 131606 aaatacctgcagaaaggaagttgctaaaactatatcaatggaatcctggaacctcatagg 131547

                                         
Query: 616    gtacacaaccgtaactttgtctgcctg 642
              ||| || || |||||||||||||||||
Sbjct: 131546 gtatactactgtaactttgtctgcctg 131520



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                
Query: 233    accaacttcttcagcttctctgcatccgatttagcacggtccaaagcctg 282
              ||||||||||||| |||||||||||| ||||| ||||| |||||||||||
Sbjct: 133391 accaacttcttcaacttctctgcatcagattttgcacgatccaaagcctg 133342



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                             
Query: 3      aatatcctcccggnaacaaacaaacaagcga 33
              ||||||||||||| || ||| ||||||||||
Sbjct: 133640 aatatcctcccggaaaaaaagaaacaagcga 133610
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>ref|NM_102820.1| Arabidopsis thaliana ARPC2A/DIS2; structural molecule AT1G30825
           (ARPC2A/DIS2) mRNA, complete cds
          Length = 1301

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 515 gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
           ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 782 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 734



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 272  tccaaagcctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttca 331
            |||| |||||| |||| ||| || || | ||||| |||||| |||||||| ||||| || 
Sbjct: 1025 tccagagcctgaatcatagattccacgcgacgccgcatcctggtgtgcataaatccctct 966

                                                  
Query: 332  gaacactttacatggtagcttacataagcatgaaaggt 369
            ||  |||| || || || || |||||||||||||||||
Sbjct: 965  gagaacttgacgtgataactaacataagcatgaaaggt 928
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>emb|BX816746.1|CNS0AAKR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH66ZF07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1428

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 515 gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
           ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 867 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 819



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 272  tccaaagcctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttca 331
            |||| |||||| |||| ||| || || | ||||| |||||| |||||||| ||||| || 
Sbjct: 1110 tccagagcctgaatcatagattccacgcgacgccgcatcctggtgtgcataaatccctct 1051

                                                  
Query: 332  gaacactttacatggtagcttacataagcatgaaaggt 369
            ||  |||| || || || || |||||||||||||||||
Sbjct: 1050 gagaacttgacgtgataactaacataagcatgaaaggt 1013
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>gb|BT005308.1| Arabidopsis thaliana At1g30825 mRNA, complete cds
          Length = 957

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 515 gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
           ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 620 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 572



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                       
Query: 272 tccaaagcctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttca 331
           |||| |||||| |||| ||| || || | ||||| |||||| |||||||| ||||| || 
Sbjct: 863 tccagagcctgaatcatagattccacgcgacgccgcatcctggtgtgcataaatccctct 804

                                                 
Query: 332 gaacactttacatggtagcttacataagcatgaaaggt 369
           ||  |||| || || || || |||||||||||||||||
Sbjct: 803 gagaacttgacgtgataactaacataagcatgaaaggt 766
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>gb|AY084256.1| Arabidopsis thaliana clone 101351 mRNA, complete sequence
          Length = 1301

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 515 gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
           ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 782 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 734



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 272  tccaaagcctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttca 331
            |||| |||||| |||| ||| || || | ||||| |||||| |||||||| ||||| || 
Sbjct: 1025 tccagagcctgaatcatagattccacgcgacgccgcatcctggtgtgcataaatccctct 966

                                                  
Query: 332  gaacactttacatggtagcttacataagcatgaaaggt 369
            ||  |||| || || || || |||||||||||||||||
Sbjct: 965  gagaacttgacgtgataactaacataagcatgaaaggt 928
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>gb|AC004135.1|AC004135 Genomic sequence for Arabidopsis thaliana BAC T17H7 from Chromosome 1,
             complete sequence
          Length = 73805

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 515   gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
             ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 42351 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 42303
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>dbj|AK118475.1| Arabidopsis thaliana At1g30825 mRNA for unknown protein, complete
           cds, clone: RAFL19-71-C24
          Length = 1251

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 515 gaaggagcattattaagtgcagcagtccgccttgcttctacaaattcct 563
           ||||||||| ||||||| |||||||  ||||| || |||||||||||||
Sbjct: 782 gaaggagcagtattaagcgcagcagcacgcctcgcctctacaaattcct 734



 Score = 44.1 bits (22), Expect = 0.61
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                        
Query: 272  tccaaagcctggatcagagactcaactctacgcctcatcctagtgtgcatgaatccttca 331
            |||| |||||| |||| ||| || || | ||||| |||||| |||||||| ||||| || 
Sbjct: 1025 tccagagcctgaatcatagattccacgcgacgccgcatcctggtgtgcataaatccctct 966

                                                  
Query: 332  gaacactttacatggtagcttacataagcatgaaaggt 369
            ||  |||| || || || || |||||||||||||||||
Sbjct: 965  gagaacttgacgtgataactaacataagcatgaaaggt 928
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>gb|AE006889.1| Sulfolobus solfataricus P2 section 248 of 272 of the complete genome
          Length = 9921

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 229  atgtaccaacttcttcagcttct 251
            |||||||||||||||||||||||
Sbjct: 3274 atgtaccaacttcttcagcttct 3296
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>ref|XM_545514.2| PREDICTED: Canis familiaris similar to kelch-like 23 (LOC488392),
            mRNA
          Length = 2088

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  aatagcacccatgatggaaag 133
            |||||||||||||||||||||
Sbjct: 1596 aatagcacccatgatggaaag 1616
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>gb|AC126055.4| Mus musculus BAC clone RP23-368O6 from chromosome 16, complete sequence
          Length = 197096

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 324   atccttcagaacactttacat 344
             |||||||||||||||||||||
Sbjct: 24848 atccttcagaacactttacat 24868
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>emb|AL365396.10| Human DNA sequence from clone RP11-338N12 on chromosome 9 Contains a
             phosphoribosyl pyrophosphate synthetase 2 (PRPS2)
             pseudogene, complete sequence
          Length = 114016

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 422   aaaacaacaaaagtaacaaaa 442
             |||||||||||||||||||||
Sbjct: 79539 aaaacaacaaaagtaacaaaa 79559
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>dbj|BS000221.1| Pan troglodytes chromosome 22 clone:PTB-061I08, map 22, complete
            sequences
          Length = 17817

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 52   ctcatgttgtctcaacggttg 72
            |||||||||||||||||||||
Sbjct: 7236 ctcatgttgtctcaacggttg 7216
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>dbj|AP001700.1| Homo sapiens genomic DNA, chromosome 21q, section 44/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     ctcatgttgtctcaacggttg 72
              |||||||||||||||||||||
Sbjct: 182683 ctcatgttgtctcaacggttg 182663
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>dbj|AP001608.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1919E1, APP-D21S292
             region, complete sequence
          Length = 158485

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    ctcatgttgtctcaacggttg 72
             |||||||||||||||||||||
Sbjct: 88440 ctcatgttgtctcaacggttg 88420
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>gb|AC159381.10| Mus musculus 6 BAC RP24-460E4 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 211463

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   gggagcaagggaagaaggga 662
             ||||||||||||||||||||
Sbjct: 29007 gggagcaagggaagaaggga 28988
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>gb|AC120871.12| Mus musculus chromosome 16, clone RP23-121E8, complete sequence
          Length = 218995

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ttgcttgtccgagtcttcct 174
             ||||||||||||||||||||
Sbjct: 39555 ttgcttgtccgagtcttcct 39574
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 371   aacaaactccaaactgtttt 390
             ||||||||||||||||||||
Sbjct: 93242 aacaaactccaaactgtttt 93261
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 517     aggagcattattaagtgcag 536
               ||||||||||||||||||||
Sbjct: 2919820 aggagcattattaagtgcag 2919839
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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    caacaaaagtaacaaaacca 445
              ||||||||||||||||||||
Sbjct: 116502 caacaaaagtaacaaaacca 116521
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>emb|CT010512.8| Mouse DNA sequence from clone RP23-283M18 on chromosome 16, complete
            sequence
          Length = 202415

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  ttgcttgtccgagtcttcct 174
            ||||||||||||||||||||
Sbjct: 2450 ttgcttgtccgagtcttcct 2469
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>gb|AC132442.3| Mus musculus BAC clone RP23-240K23 from chromosome 10, complete sequence
          Length = 201145

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     agttgaaacaagtgttctac 111
              ||||||||||||||||||||
Sbjct: 107827 agttgaaacaagtgttctac 107846
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>gb|AC126676.3| Mus musculus BAC clone RP23-445H7 from chromosome 7, complete sequence
          Length = 190059

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 643   gggagcaagggaagaaggga 662
             ||||||||||||||||||||
Sbjct: 52611 gggagcaagggaagaaggga 52630
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>emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in linkage group 2,
              complete sequence
          Length = 177223

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    aaaacaacaaaagtaacaaa 441
              ||||||||||||||||||||
Sbjct: 115180 aaaacaacaaaagtaacaaa 115161
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>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete
              sequence
          Length = 119389

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    gggagcaagggaagaaggga 662
              ||||||||||||||||||||
Sbjct: 114659 gggagcaagggaagaaggga 114678
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>emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chromosome 13 Contains a
              novel gene and a eukaryotic translation initiation factor
              4A, variant 1 (EIF4A1) pseudogene, complete sequence
          Length = 150054

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 390    tgtctagctttctaccctcaacat 413
              ||||||||||||| ||||||||||
Sbjct: 110176 tgtctagctttcttccctcaacat 110153
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>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE
          Length = 136080

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   cgaaggagcattattaagtg 533
             ||||||||||||||||||||
Sbjct: 79464 cgaaggagcattattaagtg 79483
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>gb|AF381049.1| Synechococcus sp. PCC 7002 hypothetical protein (sll1485),
            hypothetical protein (sll1486), cytochrome oxidase II
            (ctaCII), cytochrome oxidase II large subunit (ctaDII),
            and cytochrome oxidase II small subunit (ctaEII) genes,
            complete cds
          Length = 5282

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  attcctgcaaaaacgaagtt 577
            ||||||||||||||||||||
Sbjct: 3507 attcctgcaaaaacgaagtt 3488
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>emb|CR384090.7| Zebrafish DNA sequence from clone CH211-142J15 in linkage group 5,
             complete sequence
          Length = 70119

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   aacaacaaaagtaacaaaac 443
             ||||||||||||||||||||
Sbjct: 50218 aacaacaaaagtaacaaaac 50199
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>gb|AC018559.31| Mus musculus strain 129/Sv chromosome 6 clone ct7-596k8, complete
             sequence
          Length = 111775

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   acaaaagtaacaaaaccagc 447
             ||||||||||||||||||||
Sbjct: 82617 acaaaagtaacaaaaccagc 82598
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>emb|CR385029.5| Opossum DNA sequence from clone XX-191G11, complete sequence
          Length = 123110

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   gggagcaagggaagaaggga 662
             ||||||||||||||||||||
Sbjct: 91161 gggagcaagggaagaaggga 91142



 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 643   gggagcaagggaagaaggga 662
             ||||||||||||||||||||
Sbjct: 89424 gggagcaagggaagaaggga 89405
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>gb|AC117489.3| Homo sapiens 3 BAC CTD-2006M22 (CalTech BAC Library D) complete
             sequence
          Length = 145729

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 545   cttgcttctacaaattcctg 564
             ||||||||||||||||||||
Sbjct: 93924 cttgcttctacaaattcctg 93943
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>emb|BX321920.7| Zebrafish DNA sequence from clone DKEY-43F15 in linkage group 16,
             complete sequence
          Length = 92059

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   gtttgcatcaagtgcatcag 467
             ||||||||||||||||||||
Sbjct: 65560 gtttgcatcaagtgcatcag 65579
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>gb|AC055777.12| Mus musculus chromosome 10, clone RP23-56K17, complete sequence
          Length = 186105

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 643    gggagcaagggaagaaggga 662
              ||||||||||||||||||||
Sbjct: 103738 gggagcaagggaagaaggga 103719
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>ref|NM_164696.1| Drosophila melanogaster CG31635-RA (CG31635), mRNA
          Length = 6807

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  aaacaacaaaagtaacaaaa 442
            ||||||||||||||||||||
Sbjct: 1738 aaacaacaaaagtaacaaaa 1757
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>gb|AD001502.1|CH19F21246 Homo sapiens DNA from chromosome 19-cosmid f21246, genomic sequence
          Length = 44679

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 643   gggagcaagggaagaaggga 662
             ||||||||||||||||||||
Sbjct: 10186 gggagcaagggaagaaggga 10205
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>gb|AC096634.2| Homo sapiens chromosome 1 clone RP11-66M7, complete sequence
          Length = 163926

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 426  caacaaaagtaacaaaacca 445
            ||||||||||||||||||||
Sbjct: 5120 caacaaaagtaacaaaacca 5101
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>gb|AY060875.1| Drosophila melanogaster GM03875 full length cDNA
          Length = 1812

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 423  aaacaacaaaagtaacaaaa 442
            ||||||||||||||||||||
Sbjct: 1685 aaacaacaaaagtaacaaaa 1704
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>emb|BX470132.6| Zebrafish DNA sequence from clone DKEY-202L16 in linkage group 3,
             complete sequence
          Length = 163404

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tctacaaattcctgcaaaaa 570
             ||||||||||||||||||||
Sbjct: 67449 tctacaaattcctgcaaaaa 67430
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>gb|AC155719.11| Mus musculus 6 BAC RP24-236K6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 179419

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 643    gggagcaagggaagaaggga 662
              ||||||||||||||||||||
Sbjct: 174506 gggagcaagggaagaaggga 174487
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>dbj|AK013698.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:2900055F01 product:zinc finger
           protein 288, full insert sequence
          Length = 805

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 155 ttgcttgtccgagtcttcct 174
           ||||||||||||||||||||
Sbjct: 647 ttgcttgtccgagtcttcct 628
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>gb|AC092230.1|AC092230 Drosophila melanogaster, chromosome 2L, region 26F-27X, BAC clone
              BACR25K24, complete sequence
          Length = 174376

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    aaacaacaaaagtaacaaaa 442
              ||||||||||||||||||||
Sbjct: 123335 aaacaacaaaagtaacaaaa 123316
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>gb|AC159333.7| Mus musculus 10 BAC RP23-409C14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 201801

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 422    aaaacaacaaaagtaacaaaacca 445
              |||||||||||| |||||||||||
Sbjct: 159390 aaaacaacaaaaataacaaaacca 159367
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     aggagcattattaagtgcag 536
               ||||||||||||||||||||
Sbjct: 6102149 aggagcattattaagtgcag 6102130
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>emb|BX276095.7| Zebrafish DNA sequence from clone CH211-225H17, complete sequence
          Length = 197554

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 422  aaaacaacaaaagtaacaaa 441
            ||||||||||||||||||||
Sbjct: 4907 aaaacaacaaaagtaacaaa 4888
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>emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, complete sequence
          Length = 170274

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tctacaaattcctgcaaaaa 570
             ||||||||||||||||||||
Sbjct: 64627 tctacaaattcctgcaaaaa 64608
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>gb|AC154408.2| Mus musculus BAC clone RP24-259A5 from 16, complete sequence
          Length = 158312

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    ttgcttgtccgagtcttcct 174
              ||||||||||||||||||||
Sbjct: 147227 ttgcttgtccgagtcttcct 147246
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>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 230270

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 643    gggagcaagggaagaaggga 662
              ||||||||||||||||||||
Sbjct: 205513 gggagcaagggaagaaggga 205532
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>gb|AE003614.4| Drosophila melanogaster chromosome 2L, section 23 of 83 of the complete
              sequence
          Length = 259718

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    aaacaacaaaagtaacaaaa 442
              ||||||||||||||||||||
Sbjct: 149891 aaacaacaaaagtaacaaaa 149872
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>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence
          Length = 186487

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tctacaaattcctgcaaaaa 570
             ||||||||||||||||||||
Sbjct: 20948 tctacaaattcctgcaaaaa 20929
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>gb|AC004301.1|AC004301 Drosophila melanogaster DNA sequence (P1 DS07134 (D192)), complete
             sequence
          Length = 68620

 Score = 40.1 bits (20), Expect = 9.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   aaacaacaaaagtaacaaaa 442
             ||||||||||||||||||||
Sbjct: 12084 aaacaacaaaagtaacaaaa 12065


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,566,915
Number of Sequences: 3902068
Number of extensions: 6566915
Number of successful extensions: 132033
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131809
Number of HSP's gapped (non-prelim): 217
length of query: 693
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 670
effective length of database: 17,143,297,704
effective search space: 11486009461680
effective search space used: 11486009461680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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