Clone Name | rbasd2a19 |
---|---|
Clone Library Name | barley_pub |
>gb|U20778.1|HVU20778 Hordeum vulgare catalase (Cat2) mRNA, complete cds Length = 1756 Score = 807 bits (407), Expect = 0.0 Identities = 419/423 (99%) Strand = Plus / Minus Query: 1 cactttagtttaagctagagtacatgcagtttactgtaacaaaagatggtaacttattag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1734 cactttagtttaagctagagtacatgcagtttactgtaacaaaagatggtaacttattag 1675 Query: 61 tagcatggtagctaatcgaccacatgatccacagtagctggcatgcatggtcccttattg 120 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1674 tagcatggtatctattcgaccacatgatccacagtagctggcatgcatggtcccttattg 1615 Query: 121 ctggctggttcatgatatagcacaaagtttacacagaatggtccatccatcatccatggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1614 ctggctggttcatgatatagcacaaagtttacacagaatggtccatccatcatccatggc 1555 Query: 181 agatacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcac 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1554 agatccatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcac 1495 Query: 241 gacttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1494 gacttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttg 1435 Query: 301 gggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccag 360 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1434 gggtgcgcgagcgcgtcggagaagcggcgcacgaacctgtcctggcggtcgggcgcccag 1375 Query: 361 ctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctcc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1374 ctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctcc 1315 Query: 421 ctc 423 ||| Sbjct: 1314 ctc 1312
>emb|AJ849640.1| Secale cereale mRNA for catalase (cat1b gene) Length = 1781 Score = 593 bits (299), Expect = e-166 Identities = 395/424 (93%), Gaps = 11/424 (2%) Strand = Plus / Minus Query: 1 cactttagtttaagctagagtacatgcagtttactgtaacaaaagatggtaacttattag 60 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1748 cactttagtttaagccgcagtacatgcagtttactgtaacaaaagatagtaacttattag 1689 Query: 61 tagcatggtagctaatcgaccacatgatccacagtagctggcatgcatggtcccttattg 120 ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 1688 tagcacagtagctaatcgaccacatgatccacagtagctggcatg----gtctcttattg 1633 Query: 121 ctggctggttcatgatatagcacaaagtttacaca--gaatggtccatccatcatccatg 178 |||| | ||||||||||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 1632 ctgg----tccatgatatagcacaaagtttacacacagaacggtccattcatcatccatg 1577 Query: 179 gcagatacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgc 238 |||| | |||| ||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 1576 gcaggtccatc-atcacatgcttggcttcacgttgagacggtttgccaccttcatcccgc 1518 Query: 239 acgacttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgacct 298 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 1517 acgacttgtcacacttggagaggaagtcgatccagatgacgcgtagctcgtggctgacct 1458 Query: 299 tggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgccc 358 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1457 tggggtgggcgagggcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgccc 1398 Query: 359 agctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 agctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttct 1338 Query: 419 ccct 422 |||| Sbjct: 1337 ccct 1334
>emb|AJ234405.1|HVU234405 Hordeum vulgare partial mRNA; clone cMWG0652.rev Length = 357 Score = 581 bits (293), Expect = e-163 Identities = 299/301 (99%) Strand = Plus / Plus Query: 123 ggctggttcatgatatagcacaaagtttacacagaatggtccatccatcatccatggcag 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggctggttcatgatatagcacaaagtttacacagaatggtccatccatcatccatggcag 61 Query: 183 atacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacga 242 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atccatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacga 121 Query: 243 cttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggg 181 Query: 303 gtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagct 362 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gtgcgcgagcgcgtcggagaagcggcgcacgaacctgtcctggcggtcgggcgcccagct 241 Query: 363 gcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctccct 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctccct 301 Query: 423 c 423 | Sbjct: 302 c 302
>emb|Z54143.2|SSCATMR Secale cereale mRNA for catalase (cat1a gene) Length = 1747 Score = 561 bits (283), Expect = e-157 Identities = 394/424 (92%), Gaps = 14/424 (3%) Strand = Plus / Minus Query: 1 cactttagtttaagctagagtacatgcagtttactgtaacaaaagatggtaacttattag 60 |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1741 cactttagtttaagctgcagtacatgcagtttactgtaacaaaagatagtaacttattag 1682 Query: 61 tagcatggtagctaatcgaccacatgatccacagtagctggcatgcatggtcccttattg 120 ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 1681 tagcacagtagctaatcgaccacatgatccacagtagctggcatg----gtctcttattg 1626 Query: 121 ctggctggttcatgatatagcacaaagtttacaca--gaatggtccatccatcatccatg 178 |||| | |||||||||||||||| |||||||| ||| ||||||| ||||||||||| Sbjct: 1625 ctgg----tccatgatatagcacaaattttacacacagaacggtccattcatcatccatg 1570 Query: 179 gcagatacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgc 238 |||| | |||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1569 gcaggtccatc-atcacatgcttggcttcacgttgagacggttcgccaccttcatcccgc 1511 Query: 239 acgacttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgacct 298 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 1510 acgacttgtcacacttggagaggaagtcgatccagatgacgcggagctcgtggctgacct 1451 Query: 299 tggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgccc 358 ||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 1450 tggggtgggcgag-gcgtcggcgaag-ggcg-acgaacctgtcctggcggtcgggcgccc 1394 Query: 359 agctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttct 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 agctgcggtacctctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttct 1334 Query: 419 ccct 422 |||| Sbjct: 1333 ccct 1330
>gb|AF021939.1|AF021939 Hordeum vulgare catalase 2 (CAT2) gene, partial cds Length = 1326 Score = 333 bits (168), Expect = 3e-88 Identities = 171/172 (99%) Strand = Plus / Minus Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1125 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 1066 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1065 cgcgtcggagaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 1006 Query: 372 ctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctccctc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1005 ctccccgggctgcacgaagtcgttctccttcttgatcctcgtcttctccctc 954 Score = 151 bits (76), Expect = 2e-33 Identities = 79/80 (98%) Strand = Plus / Minus Query: 174 ccatggcagatacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcat 233 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 ccatggcagatccatccatcacatgcttggcttcacgttgaggcggttcgccaccttcat 1267 Query: 234 cccgcacgacttgtcacact 253 |||||||||||||||||||| Sbjct: 1266 cccgcacgacttgtcacact 1247
>emb|AJ251894.1|SCE251894 Secale cereale partial mRNA for catalase (cat1 gene) Length = 369 Score = 278 bits (140), Expect = 1e-71 Identities = 220/242 (90%), Gaps = 11/242 (4%) Strand = Plus / Minus Query: 68 gtagctaatcgaccacatgatccacagtag--ctggcatgcatggtcccttattgctggc 125 ||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||||| Sbjct: 237 gtagctaatcgaccacacgatccacagtagagctggcat--atggtctcttattgctgg- 181 Query: 126 tggttcatgatatagcacaaagtttacaca--gaatggtccatccatcatccatggcaga 183 | ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| Sbjct: 180 ---tccatgatatagcacaaagtttacacacagaacggtccattcatcatccatggcagg 124 Query: 184 tacatccatcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgac 243 | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 123 tccatc-atcacatgcttggcttcacgttgagccggttcgccaccttcatcccgcaagac 65 Query: 244 ttgtcacacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttgggg 303 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 64 ttgtcacacttggagaggaagtcgatccagatgacgcgtagctcgtggctgaccttgggg 5 Query: 304 tg 305 || Sbjct: 4 tg 3
>ref|XM_507430.1| PREDICTED Oryza sativa (japonica cultivar-group), P0036E06.27-1 mRNA Length = 1874 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1551 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1492 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1491 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1432 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1431 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1372 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1371 ctccccgggctgcttgaagtcgttct 1346
>ref|XM_463869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1874 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1551 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1492 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1491 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1432 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1431 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1372 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1371 ctccccgggctgcttgaagtcgttct 1346
>ref|XM_506682.2| PREDICTED Oryza sativa (japonica cultivar-group), P0036E06.27-1 mRNA Length = 1876 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1553 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1494 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1493 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1434 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1433 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1374 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1373 ctccccgggctgcttgaagtcgttct 1348
>ref|XM_463870.1| Oryza sativa (japonica cultivar-group), mRNA Length = 977 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 691 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 632 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 631 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 572 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 571 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 512 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 511 ctccccgggctgcttgaagtcgttct 486
>dbj|AK099923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116M08, full insert sequence Length = 1875 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1552 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1493 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1492 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1433 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1432 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1373 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1372 ctccccgggctgcttgaagtcgttct 1347
>dbj|AK099231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095I04, full insert sequence Length = 1873 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1550 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1491 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1490 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1431 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1430 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1371 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1370 ctccccgggctgcttgaagtcgttct 1345
>dbj|AK071061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079C18, full insert sequence Length = 977 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 691 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 632 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 631 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 572 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 571 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 512 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 511 ctccccgggctgcttgaagtcgttct 486
>dbj|AK065094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M08, full insert sequence Length = 1873 Score = 115 bits (58), Expect = 1e-22 Identities = 169/206 (82%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1550 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1491 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 1490 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 1431 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||||||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1430 ctcgccggcgaagcggcggatgaacctctcctgtctatccggcgcccacgacctgtacct 1371 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1370 ctccccgggctgcttgaagtcgttct 1345
>dbj|AK061923.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-B11, full insert sequence Length = 483 Score = 97.6 bits (49), Expect = 3e-17 Identities = 127/153 (83%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 155 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 96 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || |||||||||||||||||| Sbjct: 95 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcgag 36 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctg 344 | || ||||||||||||| | |||||| ||||| Sbjct: 35 ctcgccggcgaagcggcggatgaacctctcctg 3
>gb|AY104630.1| Zea mays PCO080157 mRNA sequence Length = 1960 Score = 83.8 bits (42), Expect = 4e-13 Identities = 165/206 (80%) Strand = Plus / Minus Query: 190 catcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtca 249 ||||||||| ||| ||||| |||||| ||| | || | ||||||||| |||| ||| Sbjct: 1661 catcacatgtttgccttcatgttgagccgggtggcaatcttcatccccagcgacgcgtcg 1602 Query: 250 cacttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcg 309 ||||||| ||||| ||| ||||||||| | ||||| ||||||||||| ||||| || Sbjct: 1601 cacttggcgaggaggtctatccagatggacctgagctcctggctgacctttgggtgtccg 1542 Query: 310 agcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtac 369 |||| ||||||||| || | |||||| | |||||| ||||||| ||||| ||||||| Sbjct: 1541 agcgagtcggcgaatcgcctcacgaatcggtcctgtcggtcggcgtcccaggagcggtac 1482 Query: 370 ctctccccgggctgcacgaagtcgtt 395 |||||||| |||||| ||||||||| Sbjct: 1481 ctctcccctggctgcttgaagtcgtt 1456
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 79.8 bits (40), Expect = 7e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 294 gaccttggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcggg 353 ||||||||||||||||||| || ||||||||||||| | |||||| ||||| | || || Sbjct: 825820 gaccttggggtgcgcgagctcgccggcgaagcggcggatgaacctctcctgtctatccgg 825879 Query: 354 cgcccagctgcggtacctctccccgggctgcacgaagtcgttct 397 |||||| | ||||||||||||||||||| ||||||||||| Sbjct: 825880 cgcccacgacctgtacctctccccgggctgcttgaagtcgttct 825923 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 192 tcacatgcttggcttcacgttgag 215 |||||||||||||||||||||||| Sbjct: 825369 tcacatgcttggcttcacgttgag 825392
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 79.8 bits (40), Expect = 7e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 294 gaccttggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcggg 353 ||||||||||||||||||| || ||||||||||||| | |||||| ||||| | || || Sbjct: 35028 gaccttggggtgcgcgagctcgccggcgaagcggcggatgaacctctcctgtctatccgg 35087 Query: 354 cgcccagctgcggtacctctccccgggctgcacgaagtcgttct 397 |||||| | ||||||||||||||||||| ||||||||||| Sbjct: 35088 cgcccacgacctgtacctctccccgggctgcttgaagtcgttct 35131 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 192 tcacatgcttggcttcacgttgag 215 |||||||||||||||||||||||| Sbjct: 34577 tcacatgcttggcttcacgttgag 34600
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 79.8 bits (40), Expect = 7e-12 Identities = 88/104 (84%) Strand = Plus / Plus Query: 294 gaccttggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcctggcggtcggg 353 ||||||||||||||||||| || ||||||||||||| | |||||| ||||| | || || Sbjct: 103951 gaccttggggtgcgcgagctcgccggcgaagcggcggatgaacctctcctgtctatccgg 104010 Query: 354 cgcccagctgcggtacctctccccgggctgcacgaagtcgttct 397 |||||| | ||||||||||||||||||| ||||||||||| Sbjct: 104011 cgcccacgacctgtacctctccccgggctgcttgaagtcgttct 104054 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Plus Query: 192 tcacatgcttggcttcacgttgag 215 |||||||||||||||||||||||| Sbjct: 103500 tcacatgcttggcttcacgttgag 103523
>emb|X61626.1|OSCATAL O.sativa mRNA for catalase Length = 1865 Score = 75.8 bits (38), Expect = 1e-10 Identities = 167/206 (81%), Gaps = 3/206 (1%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 1507 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 1448 Query: 252 cttggagaggaagtcgatccagatgacacgcagctcgtggctgaccttggggtgcgcgag 311 || ||||||| ||| || ||||||| | || ||||| || ||||||||||||||||| Sbjct: 1447 ctgggagaggtagttgacccagatggcgcggagctcaggggagaccttggggtgcgcga- 1389 Query: 312 cgcgtcggcgaagcggcgcacgaacctgtcctggcggtcgggcgcccagctgcggtacct 371 | || ||||||| ||||| | |||||| ||||| | || |||||||| | |||||| Sbjct: 1388 ctcgccggcgaa-cggcg-atgaacctctcctgtctatccggcgcccacgacctgtacct 1331 Query: 372 ctccccgggctgcacgaagtcgttct 397 ||||||||||||| ||||||||||| Sbjct: 1330 ctccccgggctgcttgaagtcgttct 1305
>gb|L05934.1|MZECAT3GN Zea mays catalase (Cat3) gene, complete cds Length = 6041 Score = 73.8 bits (37), Expect = 4e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 283 agctcgtggctgaccttggggtgcgcgagcgcgtcggcgaagcggcgcacgaacctgtcc 342 ||||| ||||||||||| ||||| |||||| ||||||||| || | |||||| | |||| Sbjct: 4085 agctcctggctgacctttgggtgtccgagcgagtcggcgaatcgcctcacgaatcggtcc 4026 Query: 343 tggcggtcgggcgcccagctgcggtacctctccccgggctgcacgaagtcgtt 395 || ||||||| ||||| ||||||||||||||| |||||| ||||||||| Sbjct: 4025 tgtcggtcggcgtcccaggagcggtacctctcccctggctgcttgaagtcgtt 3973
>dbj|D86327.1| Triticum aestivum mRNA for catalase, complete cds Length = 1573 Score = 60.0 bits (30), Expect = 6e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctccttcttgatc 408 |||||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 1330 gcggtacctctccccgggctgcttgaagttgttctccttctcgatc 1285
>dbj|AK068433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156D16, full insert sequence Length = 1064 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgaggcggttcgccaccttcatcccgcacgacttgtcaca 251 |||||||||||||||||||||||| | ||||| | ||||| ||| |||||| ||||| Sbjct: 779 tcacatgcttggcttcacgttgagcctattcgcaatcttcacccccaacgactcatcaca 720 Query: 252 cttggagaggaagtcgatccagatg 276 || ||||||| ||| || ||||||| Sbjct: 719 ctgggagaggtagttgacccagatg 695
>emb|X12539.1|ZMCAT3 Maize cat-3 mRNA for catalase-3 isoenzyme (EC 1.11.1.6) Length = 1801 Score = 56.0 bits (28), Expect = 1e-04 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 289 tggctgaccttggggtgcgcgagcgcgtcggcgaagcggcg-cacgaacctgtcctggcg 347 ||||||||||| ||||| |||||| ||||||||| || | |||||| | |||||| || Sbjct: 1413 tggctgacctttgggtgtccgagcgagtcggcgaatcgccttcacgaatcggtcctgtcg 1354 Query: 348 gtcgggcgcccagctgcggtacctctccccgggctgcacgaagtcgtt 395 ||||| ||||| ||||||||||||||| |||||| ||||||||| Sbjct: 1353 gtcggcgtcccaggagcggtacctctcccctggctgcttgaagtcgtt 1306
>emb|X54819.1|ZMCAT2R Maize mRNA for catalase 2 Length = 1778 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||||||||||| ||||| ||||||||| Sbjct: 1344 gcggtacctctccccgggctgcttgaagttgttctcctt 1306
>emb|Z54358.1|ZMCAT2GN Z.mays cat2 gene Length = 3662 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||||||||||| ||||| ||||||||| Sbjct: 3300 gcggtacctctccccgggctgcttgaagttgttctcctt 3262
>gb|AY110648.1| Zea mays CL1739_1 mRNA sequence Length = 1813 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||||||||||| ||||| ||||||||| Sbjct: 1358 gcggtacctctccccgggctgcttgaagttgttctcctt 1320
>gb|AY107763.1| Zea mays PCO104975 mRNA sequence Length = 1200 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||||||||||| ||||| ||||||||| Sbjct: 560 gcggtacctctccccgggctgcttgaagttgttctcctt 522
>gb|J02976.1|MZECAT2 Maize catalase (Cat2) mRNA, 3' end Length = 1793 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||||||||||| ||||| ||||||||| Sbjct: 1356 gcggtacctctccccgggctgcttgaagttgttctcctt 1318
>gb|M33103.1|MZECAT3 Z.mays catalase isozyme 3 (CAT-3) mRNA, complete cds Length = 1790 Score = 48.1 bits (24), Expect = 0.023 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 289 tggctgaccttggggtgcgcgagcgcgtcggcgaagcggcg-cacgaacctgtcctggcg 347 |||||||| || ||||| |||||| ||||||||| || | |||||| | |||||| || Sbjct: 1413 tggctgacgtttgggtgtccgagcgagtcggcgaatcgccttcacgaatcggtcctgtcg 1354 Query: 348 gtcgggcgcccagctgcggtacctctccccgggctgcacgaagtcgtt 395 ||||| ||||| ||||||||||||||| |||||| ||||||||| Sbjct: 1353 gtcggcgtcccaggagcggtacctctcccctggctgcttgaagtcgtt 1306
>dbj|D29966.1|RICCA Rice CatA gene for catalase, complete cds Length = 4670 Score = 48.1 bits (24), Expect = 0.023 Identities = 24/24 (100%) Strand = Plus / Minus Query: 192 tcacatgcttggcttcacgttgag 215 |||||||||||||||||||||||| Sbjct: 3789 tcacatgcttggcttcacgttgag 3766 Score = 48.1 bits (24), Expect = 0.023 Identities = 30/32 (93%) Strand = Plus / Minus Query: 366 gtacctctccccgggctgcacgaagtcgttct 397 ||||||||||||||||||| ||||||||||| Sbjct: 3269 gtacctctccccgggctgcttgaagtcgttct 3238
>emb|X59694.1|RCCATAL R.communis mRNA for catalase, C.-term Length = 456 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 196 atgcttggcttcacgttgaggcg 218 ||||||||||||||||||||||| Sbjct: 269 atgcttggcttcacgttgaggcg 247
>gb|AF083323.1|AF083323 Plasmodium falciparum DNA replication licensing factor MCM4 (mcm4) gene, complete cds Length = 3570 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Minus Query: 399 cttcttgatcctcgtcttctccctcct 425 |||||||||||||||||||| |||||| Sbjct: 2671 cttcttgatcctcgtcttcttcctcct 2645
>emb|X59383.1|RCCAT R.communis mRNA for catalase Length = 456 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 196 atgcttggcttcacgttgaggcg 218 ||||||||||||||||||||||| Sbjct: 269 atgcttggcttcacgttgaggcg 247
>dbj|D21161.1|RCCCATALAA Ricinus communis gene for catalase CAT1, complete cds (exon 1-8) Length = 3711 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 196 atgcttggcttcacgttgaggcg 218 ||||||||||||||||||||||| Sbjct: 3379 atgcttggcttcacgttgaggcg 3357
>ref|XM_470174.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1626 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1307 cggtacctctcccctggctgcttgaagttgttctcctt 1270
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1768024 cggtacctctcccctggctgcttgaagttgttctcctt 1768061
>gb|AY339372.1| Oryza sativa (japonica cultivar-group) catalase mRNA, complete cds Length = 1861 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1390 cggtacctctcccctggctgcttgaagttgttctcctt 1353
>gb|DQ118681.1| Oryza sativa (indica cultivar-group) catalase-C mRNA, complete cds Length = 1503 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1331 cggtacctctcccctggctgcttgaagttgttctcctt 1294
>gb|AC098693.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1004C08, complete sequence Length = 133090 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 66338 cggtacctctcccctggctgcttgaagttgttctcctt 66301
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1768022 cggtacctctcccctggctgcttgaagttgttctcctt 1768059
>dbj|AK066378.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060B21, full insert sequence Length = 1945 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1516 cggtacctctcccctggctgcttgaagttgttctcctt 1479
>dbj|AK062174.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C11, full insert sequence Length = 1763 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1368 cggtacctctcccctggctgcttgaagttgttctcctt 1331
>emb|AJ634002.1| Schedonorus arundinaceus mRNA for catalase (cat1 gene) Length = 1735 Score = 44.1 bits (22), Expect = 0.37 Identities = 40/46 (86%) Strand = Plus / Minus Query: 363 gcggtacctctccccgggctgcacgaagtcgttctccttcttgatc 408 ||||||||||||||| || ||| ||||| ||||||||||| |||| Sbjct: 1311 gcggtacctctcccctggttgcttgaagttgttctccttctcgatc 1266
>dbj|AB020502.1| Oryza sativa mRNA for catalase, complete cds Length = 1778 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 1341 cggtacctctcccctggctgcttgaagttgttctcctt 1304
>dbj|D86611.1| Oryza sativa (japonica cultivar-group) CatC gene for catalase, complete cds Length = 4167 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctcctt 401 |||||||||||||| |||||| ||||| ||||||||| Sbjct: 3471 cggtacctctcccctggctgcttgaagttgttctcctt 3434
>gb|DQ005601.1| Caryota mitis PISTILLATA-like protein (PI-1) mRNA, partial cds Length = 737 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcct 410 ||||||||||||||||||||| Sbjct: 194 gtcgttctccttcttgatcct 174
>gb|DQ005593.1| Alstroemeria ligtu PISTILLATA-like protein (PI) mRNA, partial cds Length = 750 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcct 410 ||||||||||||||||||||| Sbjct: 194 gtcgttctccttcttgatcct 174
>gb|AY436718.1| Saruma henryi PISTILLATA-like protein PI mRNA, partial cds Length = 748 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcct 410 ||||||||||||||||||||| Sbjct: 231 gtcgttctccttcttgatcct 211
>gb|AF230707.1|AF230707 Asarum europaeum MADS box containing protein PI mRNA, partial cds Length = 755 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcct 410 ||||||||||||||||||||| Sbjct: 222 gtcgttctccttcttgatcct 202
>dbj|AB094967.1| Tulipa gesneriana TGGLO mRNA for MADS-box transcription factor, complete cds Length = 876 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcct 410 ||||||||||||||||||||| Sbjct: 316 gtcgttctccttcttgatcct 296
>ref|XM_508227.1| PREDICTED: Pan troglodytes similar to Nucleosome assembly protein 1-like 4 (Nucleosome assembly protein 2) (NAP2) (LOC450961), mRNA Length = 2979 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1326 atcctcgtcttctccctcct 1307
>ref|NM_005969.3| Homo sapiens nucleosome assembly protein 1-like 4 (NAP1L4), mRNA Length = 2564 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1242 atcctcgtcttctccctcct 1223
>gb|BT019352.1| Synthetic construct Homo sapiens nucleosome assembly protein 1-like 4 mRNA, partial cds Length = 1128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1101 atcctcgtcttctccctcct 1082
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 gtcggcgaagcggcgcacga 334 |||||||||||||||||||| Sbjct: 514612 gtcggcgaagcggcgcacga 514631
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 59666 gcgcgagcgcgtcggcgaag 59685
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 cgtcggcgaagcggcgcacg 333 |||||||||||||||||||| Sbjct: 3086011 cgtcggcgaagcggcgcacg 3086030
>gb|BC022090.2| Homo sapiens nucleosome assembly protein 1-like 4, mRNA (cDNA clone MGC:4565 IMAGE:3029455), complete cds Length = 2455 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1152 atcctcgtcttctccctcct 1133
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 305 gcgcgagcgcgtcggcgaagcggc 328 |||||||||||||| ||||||||| Sbjct: 2357769 gcgcgagcgcgtcgacgaagcggc 2357746
>gb|DQ005580.1| Arum maculatum PISTILLATA-like protein (PI) mRNA, partial cds Length = 730 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 gtcgttctccttcttgatcc 409 |||||||||||||||||||| Sbjct: 194 gtcgttctccttcttgatcc 175
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 145839 gcgcgagcgcgtcggcgaag 145858
>gb|AC003977.1|HUAC003977 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-542B9, complete sequence Length = 130491 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gtacatgcagtttactgtaa 39 |||||||||||||||||||| Sbjct: 110259 gtacatgcagtttactgtaa 110278
>emb|AL591521.8| Human DNA sequence from clone RP5-965F6 on chromosome 1 Contains the 5' end of a novel gene and a thioredoxin (TXN) pseudogene, complete sequence Length = 97110 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 400 ttcttgatcctcgtcttctccctc 423 |||||||||||| ||||||||||| Sbjct: 82864 ttcttgatcctcttcttctccctc 82887
>emb|Z46913.1|SAPKSGENE S.ambofaciens gene for hypothetical polyketide gene Length = 3596 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 308 cgagcgcgtcggcgaagcgg 327 |||||||||||||||||||| Sbjct: 1251 cgagcgcgtcggcgaagcgg 1232
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 gggtgcgcgagcgcgtcggcgaag 324 ||||| |||||||||||||||||| Sbjct: 197644 gggtgggcgagcgcgtcggcgaag 197621
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaagcggc 328 |||||||||||||| ||||||||| Sbjct: 2026796 gcgcgagcgcgtcgacgaagcggc 2026819
>emb|CR858562.1| Pongo pygmaeus mRNA; cDNA DKFZp468A247 (from clone DKFZp468A247) Length = 2597 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1336 atcctcgtcttctccctcct 1317
>gb|AC012176.8| Homo sapiens chromosome 16 clone RP11-206F18, complete sequence Length = 162224 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gtacatgcagtttactgtaa 39 |||||||||||||||||||| Sbjct: 17592 gtacatgcagtttactgtaa 17611
>emb|BX510937.6| Zebrafish DNA sequence from clone DKEY-90G19 in linkage group 6, complete sequence Length = 92200 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tttaagctagagtacatgcagttt 32 |||||||||||||| ||||||||| Sbjct: 68848 tttaagctagagtaaatgcagttt 68825
>gb|AC171138.2| Helobdella robusta clone CH306-1A9, complete sequence Length = 97729 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 tgaccttggggtgcgcgagc 312 |||||||||||||||||||| Sbjct: 97681 tgaccttggggtgcgcgagc 97700
>emb|BX546446.15| Zebrafish DNA sequence from clone DKEY-7K24 in linkage group 6, complete sequence Length = 196818 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tttaagctagagtacatgcagttt 32 |||||||||||||| ||||||||| Sbjct: 127870 tttaagctagagtaaatgcagttt 127847
>emb|CR624939.1| full-length cDNA clone CS0DC013YH21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1662 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 421 atcctcgtcttctccctcct 402
>dbj|AK095320.1| Homo sapiens cDNA FLJ38001 fis, clone CTONG2012077 Length = 3453 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 729 atcctcgtcttctccctcct 710
>dbj|AK093928.1| Homo sapiens cDNA FLJ36609 fis, clone TRACH2015939 Length = 2255 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1025 atcctcgtcttctccctcct 1006
>gb|AC079603.11| Homo sapiens 12 BAC RP11-798I13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 tatagcacaaagtttacaca 155 |||||||||||||||||||| Sbjct: 10537 tatagcacaaagtttacaca 10518
>gb|AC001228.1|HSAC001228 244Kb Contig from Human Chromosome 11p15.5 spanning D11S1 through D11S25, complete sequence Length = 244254 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 129688 atcctcgtcttctccctcct 129707
>gb|BC114285.1| Danio rerio cDNA clone IMAGE:7267654 Length = 1274 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 cgttctccttcttgatcctc 411 |||||||||||||||||||| Sbjct: 531 cgttctccttcttgatcctc 512
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 1853818 gcgcgagcgcgtcggcgaag 1853837
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 1928009 gcgcgagcgcgtcggcgaag 1928028
>gb|AE009708.1| Brucella melitensis 16M chromosome II, section 70 of 107 of the complete sequence Length = 11425 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcggcgaagcggcgcacga 334 |||||||||||||||||||| Sbjct: 6413 gtcggcgaagcggcgcacga 6394
>gb|AC117984.2| Homo sapiens chromosome 16 clone CTD-2503H21, complete sequence Length = 190454 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gtacatgcagtttactgtaa 39 |||||||||||||||||||| Sbjct: 157341 gtacatgcagtttactgtaa 157322
>gb|AE004808.1| Pseudomonas aeruginosa PAO1, section 369 of 529 of the complete genome Length = 10280 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 cgagcgcgtcggcgaagcgg 327 |||||||||||||||||||| Sbjct: 2951 cgagcgcgtcggcgaagcgg 2970
>gb|AY204467.1| Myxococcus xanthus clone C1164 hypothetical protein gene, partial cds; AgmH (agmH), hypothetical protein, and putative receptor protein genes, complete cds; and GTPase regulator gene, partial cds Length = 4328 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cgcgtcggcgaagcggcgca 331 |||||||||||||||||||| Sbjct: 94 cgcgtcggcgaagcggcgca 75
>gb|AC138305.2| Homo sapiens chromosome 16 clone RP11-2K6, complete sequence Length = 173695 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gtacatgcagtttactgtaa 39 |||||||||||||||||||| Sbjct: 152024 gtacatgcagtttactgtaa 152043
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 gtgcgcgagcgcgtcggcga 322 |||||||||||||||||||| Sbjct: 1961354 gtgcgcgagcgcgtcggcga 1961335
>gb|AC131971.9| Homo sapiens chromosome 11, clone CTC-343N3, complete sequence Length = 176226 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 145974 atcctcgtcttctccctcct 145955
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcggcgaagcggcgcacga 334 |||||||||||||||||||| Sbjct: 699631 gtcggcgaagcggcgcacga 699612
>gb|AY891170.1| Synthetic construct Homo sapiens clone FLH008707.01L nucleosome assembly protein 1-like 4 (NAP1L4) mRNA, partial cds Length = 1128 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1101 atcctcgtcttctccctcct 1082
>dbj|AK105237.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A03, full insert sequence Length = 2052 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 1519 gcgcgagcgcgtcggcgaag 1538
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 cggcgaagcggcgcacgaac 336 |||||||||||||||||||| Sbjct: 348454 cggcgaagcggcgcacgaac 348473
>dbj|AK112246.1| Ciona intestinalis cDNA, clone:cicl054g10, full insert sequence Length = 2143 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 atcatccatggcagatacatccat 192 |||||||||||||||||| ||||| Sbjct: 293 atcatccatggcagatacttccat 270
>gb|U77456.1|HSU77456 Human nucleosome assembly protein 2 mRNA, complete cds Length = 2534 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 1250 atcctcgtcttctccctcct 1231
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 1925731 gcgcgagcgcgtcggcgaag 1925750
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 1853796 gcgcgagcgcgtcggcgaag 1853815
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 gcgcgagcgcgtcggcgaag 324 |||||||||||||||||||| Sbjct: 48536 gcgcgagcgcgtcggcgaag 48555
>gb|AF035255.1|AF035255 Glycine max catalase (cat4) mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 5.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 364 cggtacctctccccgggctgcacgaagtcgttctccttct 403 ||||| ||||| ||||||||| ||||| ||||||||||| Sbjct: 1344 cggtatctctctccgggctgcttgaagttgttctccttct 1305
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 gtcggcgaagcggcgcacga 334 |||||||||||||||||||| Sbjct: 699619 gtcggcgaagcggcgcacga 699600
>gb|U51281.1|HSU51281 Human chromosome 11 cosmid cSRL-87f11 Length = 37972 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 406 atcctcgtcttctccctcct 425 |||||||||||||||||||| Sbjct: 33276 atcctcgtcttctccctcct 33257
>emb|X55036.1|MMLMRS M.musculus long mosaic repeated sequence (LMRS) Length = 15055 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ccatccatcatccatggcag 182 |||||||||||||||||||| Sbjct: 2792 ccatccatcatccatggcag 2811 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,184,080 Number of Sequences: 3902068 Number of extensions: 3184080 Number of successful extensions: 67105 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65821 Number of HSP's gapped (non-prelim): 1259 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)