ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd2a18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469455.1| Oryza sativa (japonica cultivar-group), mRNA 325 1e-85
2dbj|AK065804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 1e-85
3gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 geno... 228 2e-56
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 228 2e-56
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
6gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, p... 200 4e-48
7gb|AC009660.15| Homo sapiens chromosome 15, clone RP11-424J10, c... 46 0.14
8gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome... 44 0.56
9gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosom... 44 0.56
10gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosom... 44 0.56
11gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, comp... 44 0.56
12ref|NM_128656.2| Arabidopsis thaliana oxysterol binding AT2G3102... 42 2.2
13gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, com... 42 2.2
14gb|AC151759.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.2
15gb|AC168268.2| Mus musculus BAC clone RP23-339K12 from chromosom... 42 2.2
16gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosom... 42 2.2
17gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 ma... 42 2.2
18gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, co... 42 2.2
19gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, co... 42 2.2
20emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in... 42 2.2
21gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, comple... 42 2.2
22gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complet... 42 2.2
23gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete se... 42 2.2
24gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s... 42 2.2
25gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334... 42 2.2
26gb|AC007846.12| Homo sapiens chromosome 17, clone CTC-803F22, co... 42 2.2
27gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map ... 42 2.2
28gb|AC154497.2| Mus musculus BAC clone RP24-112C15 from chromosom... 42 2.2
29gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, comple... 42 2.2
30gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, ... 42 2.2
31gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, com... 42 2.2
32emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chr... 42 2.2
33emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in l... 42 2.2
34gb|BC072570.1| Mus musculus cDNA clone IMAGE:5719559 42 2.2
35emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chro... 42 2.2
36gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 8.8
37gb|AC150653.5| Bos taurus BAC CH240-226L9 (Children's Hospital ... 40 8.8
38gb|AC150694.2| Bos taurus BAC CH240-144A17 (Children's Hospital... 40 8.8
39gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete... 40 8.8
40gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome... 40 8.8
41gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome... 40 8.8
42gb|BC056062.1| Xenopus laevis chronic myelogenous leukemia tumor... 40 8.8
43gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genom... 40 8.8
44gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete s... 40 8.8
45emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chro... 40 8.8
46gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer... 40 8.8
47emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, ... 40 8.8
48emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, B... 40 8.8
49gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, comp... 40 8.8
50gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, comp... 40 8.8
51gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, R... 40 8.8
52gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 gen... 40 8.8
53gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, com... 40 8.8
54dbj|AK163197.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 8.8
55emb|CR338865.2| Gallus gallus finished cDNA, clone ChEST1020f23 40 8.8
56dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
58gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, com... 40 8.8
59gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B... 40 8.8
60gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, com... 40 8.8
61dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
62gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38... 40 8.8
63gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.8
64gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosom... 40 8.8
65gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
66gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 ... 40 8.8
67gb|M79353.1|HIVENVMA7 Human immunodeficiency virus type 1 (clone... 40 8.8
68emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chro... 40 8.8
69gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 8.8
70emb|AL731811.24| Mouse DNA sequence from clone RP23-60A1 on chro... 40 8.8

>ref|XM_469455.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2735

 Score =  325 bits (164), Expect = 1e-85
 Identities = 251/276 (90%), Gaps = 3/276 (1%)
 Strand = Plus / Minus

                                                                        
Query: 345  cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 403
            ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 2467 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 2408

                                                                        
Query: 404  gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 463
            ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 2407 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 2348

                                                                        
Query: 464  aaccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggttt 523
            |||||||  |||||||||||||||||| || ||||||| || |||||||||| |||||||
Sbjct: 2347 aaccacca-aggtagcggtatgtgtcggtagctttatcttttgcaaaccacc-gaggttt 2290

                                                                        
Query: 524  ccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaacttctc 583
            |||||| |||||||||||||| |||||||| |||||||| || |||||||||||||||||
Sbjct: 2289 ccacccgctctcctgcatcttccgtgcctgtcgttgtctctgttcaagcctcaacttctc 2230

                                                
Query: 584  agcatttgctctttcatattcaccattctctaggca 619
            |||||||||||||||||| |||||||||||||||||
Sbjct: 2229 agcatttgctctttcatactcaccattctctaggca 2194



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 288  tttaattgctctagtataaaccactaaaaa 317
            ||||||||||||| |||||||| |||||||
Sbjct: 2533 tttaattgctctaatataaaccgctaaaaa 2504



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>dbj|AK065804.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037L05, full
            insert sequence
          Length = 2353

 Score =  325 bits (164), Expect = 1e-85
 Identities = 251/276 (90%), Gaps = 3/276 (1%)
 Strand = Plus / Minus

                                                                        
Query: 345  cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 403
            ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 2085 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 2026

                                                                        
Query: 404  gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 463
            ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 2025 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 1966

                                                                        
Query: 464  aaccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggttt 523
            |||||||  |||||||||||||||||| || ||||||| || |||||||||| |||||||
Sbjct: 1965 aaccacca-aggtagcggtatgtgtcggtagctttatcttttgcaaaccacc-gaggttt 1908

                                                                        
Query: 524  ccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaacttctc 583
            |||||| |||||||||||||| |||||||| |||||||| || |||||||||||||||||
Sbjct: 1907 ccacccgctctcctgcatcttccgtgcctgtcgttgtctctgttcaagcctcaacttctc 1848

                                                
Query: 584  agcatttgctctttcatattcaccattctctaggca 619
            |||||||||||||||||| |||||||||||||||||
Sbjct: 1847 agcatttgctctttcatactcaccattctctaggca 1812



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>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete
              sequence
          Length = 139074

 Score =  228 bits (115), Expect = 2e-56
 Identities = 190/211 (90%), Gaps = 3/211 (1%)
 Strand = Plus / Plus

                                                                          
Query: 345    cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 403
              ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 109136 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 109195

                                                                          
Query: 404    gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 463
              ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 109196 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 109255

                                                                          
Query: 464    aaccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggttt 523
              ||||| || |||||||||||||||||| || ||||||| || |||||||| |||||||||
Sbjct: 109256 aacca-ccaaggtagcggtatgtgtcggtagctttatcttttgcaaacca-ccgaggttt 109313

                                             
Query: 524    ccacccactctcctgcatctttcgtgcctgc 554
              |||||| |||||||||||||| |||||||||
Sbjct: 109314 ccacccgctctcctgcatcttccgtgcctgc 109344



 Score =  107 bits (54), Expect = 5e-20
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                          
Query: 550    cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 609
              |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 109871 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 109930

                        
Query: 610    tctctaggca 619
              ||||||||||
Sbjct: 109931 tctctaggca 109940



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 288    tttaattgctctagtataaaccactaaaaa 317
              ||||||||||||| |||||||| |||||||
Sbjct: 109070 tttaattgctctaatataaaccgctaaaaa 109099



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  228 bits (115), Expect = 2e-56
 Identities = 190/211 (90%), Gaps = 3/211 (1%)
 Strand = Plus / Minus

                                                                            
Query: 345      cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 403
                ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 28043971 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 28043912

                                                                            
Query: 404      gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 463
                ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 28043911 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 28043852

                                                                            
Query: 464      aaccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggttt 523
                ||||| || |||||||||||||||||| || ||||||| || |||||||| |||||||||
Sbjct: 28043851 aacca-ccaaggtagcggtatgtgtcggtagctttatcttttgcaaacca-ccgaggttt 28043794

                                               
Query: 524      ccacccactctcctgcatctttcgtgcctgc 554
                |||||| |||||||||||||| |||||||||
Sbjct: 28043793 ccacccgctctcctgcatcttccgtgcctgc 28043763



 Score =  107 bits (54), Expect = 5e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 550      cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 609
                |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28043236 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 28043177

                          
Query: 610      tctctaggca 619
                ||||||||||
Sbjct: 28043176 tctctaggca 28043167



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 288      tttaattgctctagtataaaccactaaaaa 317
                ||||||||||||| |||||||| |||||||
Sbjct: 28044037 tttaattgctctaatataaaccgctaaaaa 28044008



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      atgtacggaaaaacaatgta 248
                ||||||||||||||||||||
Sbjct: 20494425 atgtacggaaaaacaatgta 20494444



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  228 bits (115), Expect = 2e-56
 Identities = 190/211 (90%), Gaps = 3/211 (1%)
 Strand = Plus / Minus

                                                                            
Query: 345      cagagaaccagaagacctgtaacctacttgaa-cctagtcagttatcattagatcgtttg 403
                ||||||||||||||||||||||||||||  || |||||||||||||||| | |||||| |
Sbjct: 28135295 cagagaaccagaagacctgtaacctactcaaagcctagtcagttatcatcaaatcgttag 28135236

                                                                            
Query: 404      gaagttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagt 463
                ||| ||||||||| || || || |||||||||||||||| ||||||||||||||||||||
Sbjct: 28135235 gaacttgtccgaagatatctggacagccttcccagctgcccttttctctggattcccagt 28135176

                                                                            
Query: 464      aaccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggttt 523
                ||||| || |||||||||||||||||| || ||||||| || |||||||| |||||||||
Sbjct: 28135175 aacca-ccaaggtagcggtatgtgtcggtagctttatcttttgcaaacca-ccgaggttt 28135118

                                               
Query: 524      ccacccactctcctgcatctttcgtgcctgc 554
                |||||| |||||||||||||| |||||||||
Sbjct: 28135117 ccacccgctctcctgcatcttccgtgcctgc 28135087



 Score =  107 bits (54), Expect = 5e-20
 Identities = 66/70 (94%)
 Strand = Plus / Minus

                                                                            
Query: 550      cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 609
                |||| |||||||| || ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 28134560 cctgtcgttgtctctgttcaagcctcaacttctcagcatttgctctttcatactcaccat 28134501

                          
Query: 610      tctctaggca 619
                ||||||||||
Sbjct: 28134500 tctctaggca 28134491



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 288      tttaattgctctagtataaaccactaaaaa 317
                ||||||||||||| |||||||| |||||||
Sbjct: 28135361 tttaattgctctaatataaaccgctaaaaa 28135332



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      atgtacggaaaaacaatgta 248
                ||||||||||||||||||||
Sbjct: 20487454 atgtacggaaaaacaatgta 20487473



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>gb|AF466646.1| Zea mays putative transposase (Z195D10.1) gene, partial cds;
             glycyl-tRNA synthetase (Z195D10.2), ornithine
             carbamoyltransferase (Z195D10.3), putative gag protein
             (Z195D10.5), putative SET-domain transcriptional regulator
             (Z195D10.7), putative oxysterol-binding protein
             (Z195D10.8), putative polyprotein (Z195D10.9), putative
             oxysterol-binding protein (Z195D10.10), putative gag-pol
             polyprotein (Z195D10.11), putative
             phosphatidylinositol-4-phosphate-5-kinase (Z195D10.12),
             hypothetical protein (Z195D10.15), putative gag-pol
             polyprotein (Z195D10.16), putative polyprotein
             (Z195D10.17), putative retrotransposon protein
             (Z195D10.18), and prpol (Z195D10.19) genes, complete cds;
             and putative teosinte branched2 (Z195D10.20) gene, partial
             cds
          Length = 141939

 Score =  200 bits (101), Expect = 4e-48
 Identities = 184/209 (88%), Gaps = 2/209 (0%)
 Strand = Plus / Minus

                                                                         
Query: 346   agagaaccagaagacctgtaacctacttgaacctagtcagttatcattagatcgtttgga 405
             ||||||||| ||||||| |||||||||  ||||||||||| |||||| |||||||| || 
Sbjct: 63865 agagaaccaaaagacctataacctactcaaacctagtcagctatcatcagatcgttaggg 63806

                                                                         
Query: 406   agttgtccgaaaatgtcagggcagccttcccagctgctcttttctctggattcccagtaa 465
               ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 63805 tcttgcccgaagatgtcggggcagccttcccagctgctcttttctctggattcccagtac 63746

                                                                         
Query: 466   ccacccgaggtagcggtatgtgtcgctacctttatccttcgcaaaccacccgaggtttcc 525
             ||| |||||||| |||||||||||  || |||||||||| |||||||| |||||| ||||
Sbjct: 63745 cca-ccgaggtaacggtatgtgtcagtagctttatcctttgcaaacca-ccgaggcttcc 63688

                                          
Query: 526   acccactctcctgcatctttcgtgcctgc 554
             | || || |||||||||||||||||||||
Sbjct: 63687 atccgctatcctgcatctttcgtgcctgc 63659



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 82/94 (87%), Gaps = 1/94 (1%)
 Strand = Plus / Minus

                                                                         
Query: 550   cctgccgttgtctttgctcaagcctcaacttctcagcatttgctctttcatattcaccat 609
             ||||||| ||| | || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 60938 cctgccgctgtttctgttcaagcctcaacttctcagcatttgccctttcatattcacctt 60879

                                               
Query: 610   tctctaggcaccttctggtccggtcgcaatcttg 643
             |||| || || | ||||||| ||||| |||||||
Sbjct: 60878 tctccagacatc-tctggtctggtcgtaatcttg 60846



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>gb|AC009660.15| Homo sapiens chromosome 15, clone RP11-424J10, complete sequence
          Length = 214166

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 559   gtctttgctcaagcctcaacttctcag 585
             |||||||||||||||||| ||||||||
Sbjct: 19058 gtctttgctcaagcctcaccttctcag 19032



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>gb|AC166653.5| Mus musculus BAC clone RP24-84J23 from chromosome 14, complete sequence
          Length = 223142

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 330   attccaaaagaagaacagagaa 351
             ||||||||||||||||||||||
Sbjct: 67515 attccaaaagaagaacagagaa 67536



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>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence
          Length = 186860

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 330    attccaaaagaagaacagagaa 351
              ||||||||||||||||||||||
Sbjct: 160217 attccaaaagaagaacagagaa 160238



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>gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosome 6, complete sequence
          Length = 179032

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 330    attccaaaagaagaacagagaa 351
              ||||||||||||||||||||||
Sbjct: 121756 attccaaaagaagaacagagaa 121735



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>gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, complete sequence
          Length = 209705

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 330   attccaaaagaagaacagagaa 351
             ||||||||||||||||||||||
Sbjct: 63050 attccaaaagaagaacagagaa 63071



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>ref|NM_128656.2| Arabidopsis thaliana oxysterol binding AT2G31020 mRNA, complete cds
          Length = 2422

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                        
Query: 519  ggtttccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaac 578
            |||||||| || ||||| ||||||| ||  ||||| | ||||||||| || | |||||||
Sbjct: 2153 ggtttccaacctctctcttgcatctctctcgcctgtctttgtctttgttccaacctcaac 2094

                 
Query: 579  ttctc 583
            |||||
Sbjct: 2093 ttctc 2089



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>gb|AC121298.10| Mus musculus chromosome 5, clone RP23-377E6, complete sequence
          Length = 194045

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   caagcctcaacttctcagcat 588
             |||||||||||||||||||||
Sbjct: 13248 caagcctcaacttctcagcat 13268



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>gb|AC151759.1| Ornithorhynchus anatinus chromosome UNK clone OABb-454P24, complete
              sequence
          Length = 147999

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 551    ctgccgttgtctttgctcaag 571
              |||||||||||||||||||||
Sbjct: 147854 ctgccgttgtctttgctcaag 147874



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>gb|AC168268.2| Mus musculus BAC clone RP23-339K12 from chromosome 17, complete
             sequence
          Length = 184085

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 586   catttgctctttcatattcaccattctct 614
             |||||||||||||| | ||||||||||||
Sbjct: 83423 catttgctctttcaaactcaccattctct 83395



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>gb|AC160993.5| Mus musculus BAC clone RP23-159D11 from chromosome 16, complete sequence
          Length = 187536

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 318    tggaaccaacagattccaaaagaag 342
              ||||||||||||| |||||||||||
Sbjct: 149638 tggaaccaacagagtccaaaagaag 149614



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>gb|AC151667.1| Pan troglodytes chromosome X clone RP43-007H19 map human ortholog q28,
             complete sequence
          Length = 200796

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 442   ctcttttctctggattcccag 462
             |||||||||||||||||||||
Sbjct: 50742 ctcttttctctggattcccag 50762



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>gb|AC120413.20| Mus musculus chromosome 5, clone RP24-458L16, complete sequence
          Length = 163011

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 568   caagcctcaacttctcagcat 588
             |||||||||||||||||||||
Sbjct: 76307 caagcctcaacttctcagcat 76287



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>gb|AC145689.4| Pan troglodytes BAC clone CH251-184I22 from X, complete sequence
          Length = 181915

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 442    ctcttttctctggattcccag 462
              |||||||||||||||||||||
Sbjct: 165530 ctcttttctctggattcccag 165550



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>emb|CR388131.10| Zebrafish DNA sequence from clone DKEY-114G9 in linkage group 1, complete
              sequence
          Length = 169443

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    cagctgctcttttctctggat 456
              |||||||||||||||||||||
Sbjct: 161206 cagctgctcttttctctggat 161186



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>gb|AC125313.2| Mus musculus BAC clone RP24-353A16 from 5, complete sequence
          Length = 152433

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 568    caagcctcaacttctcagcat 588
              |||||||||||||||||||||
Sbjct: 146622 caagcctcaacttctcagcat 146602



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>gb|AC125343.2| Mus musculus BAC clone RP24-537A5 from 5, complete sequence
          Length = 131476

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   caagcctcaacttctcagcat 588
             |||||||||||||||||||||
Sbjct: 90426 caagcctcaacttctcagcat 90446



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>gb|AC155955.2| Xenopus tropicalis clone CH216-151P9, complete sequence
          Length = 166977

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   atattcagatatacacaaatg 135
             |||||||||||||||||||||
Sbjct: 39889 atattcagatatacacaaatg 39909



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>gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete sequence
          Length = 113210

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 583   cagcatttgctctttcatatt 603
             |||||||||||||||||||||
Sbjct: 46146 cagcatttgctctttcatatt 46126



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>gb|AC087871.9| Genomic sequence for Mus musculus, clone RP23-334N23, complete sequence
          Length = 117000

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 297   tctagtataaaccactaaaaa 317
             |||||||||||||||||||||
Sbjct: 50376 tctagtataaaccactaaaaa 50396



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>gb|AC007846.12| Homo sapiens chromosome 17, clone CTC-803F22, complete sequence
          Length = 160034

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 324   caacagattccaaaagaagaa 344
             |||||||||||||||||||||
Sbjct: 81367 caacagattccaaaagaagaa 81347



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>gb|AC004669.3| Arabidopsis thaliana chromosome 2 clone F7F1 map m283, complete
             sequence
          Length = 89779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 519   ggtttccacccactctcctgcatctttcgtgcctgccgttgtctttgctcaagcctcaac 578
             |||||||| || ||||| ||||||| ||  ||||| | ||||||||| || | |||||||
Sbjct: 79010 ggtttccaacctctctcttgcatctctctcgcctgtctttgtctttgttccaacctcaac 78951

                  
Query: 579   ttctc 583
             |||||
Sbjct: 78950 ttctc 78946



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>gb|AC154497.2| Mus musculus BAC clone RP24-112C15 from chromosome 17, complete
             sequence
          Length = 176161

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 586   catttgctctttcatattcaccattctct 614
             |||||||||||||| | ||||||||||||
Sbjct: 35311 catttgctctttcaaactcaccattctct 35283



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>gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, complete sequence
          Length = 161955

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    catgctttactattctttggc 97
             |||||||||||||||||||||
Sbjct: 48704 catgctttactattctttggc 48684



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>gb|U82671.5| Homo sapiens chromosome X multiple clones map q28, complete sequence
          Length = 324604

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 442    ctcttttctctggattcccag 462
              |||||||||||||||||||||
Sbjct: 160940 ctcttttctctggattcccag 160960



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>gb|AC117622.10| Mus musculus chromosome 5, clone RP23-114L5, complete sequence
          Length = 185368

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 568    caagcctcaacttctcagcat 588
              |||||||||||||||||||||
Sbjct: 147067 caagcctcaacttctcagcat 147087



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>emb|AL928988.14| Mouse DNA sequence from clone RP23-402M7 on chromosome 2, complete
             sequence
          Length = 121977

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 568   caagcctcaacttctcagcat 588
             |||||||||||||||||||||
Sbjct: 50766 caagcctcaacttctcagcat 50786



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>emb|BX005220.7| Zebrafish DNA sequence from clone DKEY-82D4 in linkage group 1, complete
              sequence
          Length = 170985

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 436    cagctgctcttttctctggat 456
              |||||||||||||||||||||
Sbjct: 156667 cagctgctcttttctctggat 156647



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>gb|BC072570.1| Mus musculus cDNA clone IMAGE:5719559
          Length = 4255

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 568  caagcctcaacttctcagcat 588
            |||||||||||||||||||||
Sbjct: 1149 caagcctcaacttctcagcat 1129



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>emb|CT010467.6| Mouse DNA sequence from clone RP23-81C12 on chromosome 17, complete
            sequence
          Length = 216559

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 586  catttgctctttcatattcaccattctct 614
            |||||||||||||| | ||||||||||||
Sbjct: 9850 catttgctctttcaaactcaccattctct 9878



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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tacatattcagatatacaca 131
             ||||||||||||||||||||
Sbjct: 27749 tacatattcagatatacaca 27768



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>gb|AC150653.5| Bos taurus  BAC CH240-226L9 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 158246

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   atacacaaatggcctatata 144
             ||||||||||||||||||||
Sbjct: 54687 atacacaaatggcctatata 54706



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>gb|AC150694.2| Bos taurus  BAC CH240-144A17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 163920

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 125   atacacaaatggcctatata 144
             ||||||||||||||||||||
Sbjct: 15470 atacacaaatggcctatata 15451



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>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence
          Length = 186286

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 235   ggaaaaacaatgtatctgaaagggcagc 262
             |||||||||||||||||||  |||||||
Sbjct: 55303 ggaaaaacaatgtatctgattgggcagc 55276



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>gb|AC127361.4| Mus musculus BAC clone RP23-125M8 from chromosome 17, complete sequence
          Length = 201331

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    attccaaaagaagaacagag 349
              ||||||||||||||||||||
Sbjct: 155743 attccaaaagaagaacagag 155762



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>gb|AC154605.2| Mus musculus BAC clone RP23-348G3 from chromosome 16, complete sequence
          Length = 191050

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   attccaaaagaagaacagag 349
             ||||||||||||||||||||
Sbjct: 68557 attccaaaagaagaacagag 68576



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>gb|BC056062.1| Xenopus laevis chronic myelogenous leukemia tumor antigen 66, mRNA
           (cDNA clone MGC:69032 IMAGE:4964693), complete cds
          Length = 2026

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 595 tttcatattcaccattctct 614
           ||||||||||||||||||||
Sbjct: 752 tttcatattcaccattctct 733



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>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence,
            complete sequence
          Length = 101073

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 229  atgtacggaaaaacaatgta 248
            ||||||||||||||||||||
Sbjct: 8490 atgtacggaaaaacaatgta 8509



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>gb|AC146588.14| Medicago truncatula clone mth2-145c3, complete sequence
          Length = 116965

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 583    cagcatttgctctttcatat 602
              ||||||||||||||||||||
Sbjct: 107321 cagcatttgctctttcatat 107340



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>emb|AL583806.7| Human DNA sequence from clone RP11-10F17 on chromosome 6 Contains the
             C6orf58 gene and the 5' end of a novel gene, complete
             sequence
          Length = 114100

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 595   tttcatattcaccattctct 614
             ||||||||||||||||||||
Sbjct: 37519 tttcatattcaccattctct 37538



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>gb|AC164578.5| Mus musculus  BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 225564

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    aacagattccaaaagaagaa 344
              ||||||||||||||||||||
Sbjct: 166627 aacagattccaaaagaagaa 166608



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>emb|AL161571.2|ATCHRIV67 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 67
          Length = 200001

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 25     atgccatagattgataagagatat 48
              |||||||||| |||||||||||||
Sbjct: 105530 atgccatagactgataagagatat 105507



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>emb|AL035602.1|ATT29A15 Arabidopsis thaliana DNA chromosome 4, BAC clone T29A15 (ESSA project)
          Length = 95679

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 25    atgccatagattgataagagatat 48
             |||||||||| |||||||||||||
Sbjct: 44820 atgccatagactgataagagatat 44797



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>gb|AC101690.7| Mus musculus chromosome 7, clone RP23-218E6, complete sequence
          Length = 229964

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 517   gaggtttccacccactctcc 536
             ||||||||||||||||||||
Sbjct: 12268 gaggtttccacccactctcc 12287



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>gb|AC009930.7| Homo sapiens chromosome 8, clone RP11-114O8, complete sequence
          Length = 165662

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   attccaaaagaagaacagag 349
             ||||||||||||||||||||
Sbjct: 83042 attccaaaagaagaacagag 83023



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>gb|AC084823.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-290L7, Complete
              Sequence, complete sequence
          Length = 212133

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    gcagccttcccagctgctct 445
              ||||||||||||||||||||
Sbjct: 182775 gcagccttcccagctgctct 182756



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>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
             sequence
          Length = 135510

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 522   ttccacccactctcctgcatctttcgtgcctg 553
             ||||| ||||||||||||||||| | ||||||
Sbjct: 99235 ttccaaccactctcctgcatcttccttgcctg 99266



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>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence
          Length = 166503

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 74    atgcatgctttactattctt 93
             ||||||||||||||||||||
Sbjct: 76326 atgcatgctttactattctt 76345



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>dbj|AK163197.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730084F04
            product:unclassifiable, full insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 577  acttctcagcatttgctctt 596
            ||||||||||||||||||||
Sbjct: 2271 acttctcagcatttgctctt 2252



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>emb|CR338865.2| Gallus gallus finished cDNA, clone ChEST1020f23
          Length = 893

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 acacaaatggcctatataac 146
           ||||||||||||||||||||
Sbjct: 281 acacaaatggcctatataac 300



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 522      ttccacccactctcctgcatctttcgtgcctg 553
                ||||| ||||||||||||||||| | ||||||
Sbjct: 21235124 ttccaaccactctcctgcatcttccttgcctg 21235093



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      atgtacggaaaaacaatgta 248
                ||||||||||||||||||||
Sbjct: 15942888 atgtacggaaaaacaatgta 15942869



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>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence
          Length = 179974

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 517    gaggtttccacccactctcc 536
              ||||||||||||||||||||
Sbjct: 173467 gaggtttccacccactctcc 173486



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>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete
              sequence
          Length = 152883

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    atgtacggaaaaacaatgta 248
              ||||||||||||||||||||
Sbjct: 138725 atgtacggaaaaacaatgta 138744



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>gb|AC104946.4| Homo sapiens chromosome 8, clone RP11-946L20, complete sequence
          Length = 200292

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  attccaaaagaagaacagag 349
            ||||||||||||||||||||
Sbjct: 4786 attccaaaagaagaacagag 4767



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>dbj|AP004131.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_F01
          Length = 120026

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   atgtacggaaaaacaatgta 248
             ||||||||||||||||||||
Sbjct: 86563 atgtacggaaaaacaatgta 86544



to top

>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete
              sequence
          Length = 255772

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 235    ggaaaaacaatgtatctgaaagggcagc 262
              |||||||||||||||||||  |||||||
Sbjct: 180160 ggaaaaacaatgtatctgattgggcagc 180133



to top

>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     aaaaatggaaccaacagatt 332
               ||||||||||||||||||||
Sbjct: 5976052 aaaaatggaaccaacagatt 5976033



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>gb|AC159275.6| Mus musculus BAC clone RP23-367C13 from chromosome 8, complete sequence
          Length = 195034

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    attccaaaagaagaacagag 349
              ||||||||||||||||||||
Sbjct: 103656 attccaaaagaagaacagag 103637



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 522      ttccacccactctcctgcatctttcgtgcctg 553
                ||||| ||||||||||||||||| | ||||||
Sbjct: 21246388 ttccaaccactctcctgcatcttccttgcctg 21246357



to top

>gb|AC004306.1|AC004306 Drosophila melanogaster DNA sequence (P1 DS01386 (D198)), complete
             sequence
          Length = 61849

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 235   ggaaaaacaatgtatctgaaagggcagc 262
             |||||||||||||||||||  |||||||
Sbjct: 15777 ggaaaaacaatgtatctgattgggcagc 15750



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>gb|M79353.1|HIVENVMA7 Human immunodeficiency virus type 1 (clone MA7) glycoprotein 120
           (env) gene, 5' end
          Length = 1566

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 589 ttgctctttcatattcacca 608
           ||||||||||||||||||||
Sbjct: 480 ttgctctttcatattcacca 499



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>emb|AL603837.8| Mouse DNA sequence from clone RP23-254F2 on chromosome 15, complete
              sequence
          Length = 202904

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 426    gcagccttcccagctgctct 445
              ||||||||||||||||||||
Sbjct: 194122 gcagccttcccagctgctct 194103



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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   tacatattcagatatacaca 131
             ||||||||||||||||||||
Sbjct: 95841 tacatattcagatatacaca 95860



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>emb|AL731811.24| Mouse DNA sequence from clone RP23-60A1 on chromosome X, complete
              sequence
          Length = 167102

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 577    acttctcagcatttgctctt 596
              ||||||||||||||||||||
Sbjct: 148000 acttctcagcatttgctctt 148019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,858,287
Number of Sequences: 3902068
Number of extensions: 5858287
Number of successful extensions: 117259
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116892
Number of HSP's gapped (non-prelim): 350
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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