ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1l17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF129479.1| Hordeum vulgare subsp. vulgare cultivar Albacete HAK2 (HAK2) mRNA, complete cds Length = 2840 Score = 1439 bits (726), Expect = 0.0 Identities = 749/757 (98%) Strand = Plus / Minus Query: 1 tctaaaacgtggtgtatttacatgttcgccgagccccggnaaatcagaacggtggcagct 60 |||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||| Sbjct: 2744 tctaaaacgtggtgtatttacatgttcgccgaagccccggaaatcagaacggtggcagct 2685 Query: 61 tagcctgttcggccggccaccgaacatctttacatcgcctgaaagctcggcgacactaac 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2684 tagcctgttcggccggccaccgaacatctttacatcgcctgaaagctcggcgacactaac 2625 Query: 121 aggcatccaaaagaactgacgaaaaattacactaaacgtagtagatcatgccgacctcga 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2624 aggcatccaaaagaactgacgaaaaattacactaaacgtagtagatcatgccgacctcga 2565 Query: 181 tgaggctgatgtggggtatgtgcagcgtcaccgatgggcccctgcagttcttgcgaagga 240 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2564 tgaggctgatgtggggtatgtgcagcgtcaccgacgggcccctgcagttcttgcgaagga 2505 Query: 241 acgagtaggcgtagtcgatggcgaacgacttcaagaagttggagttcttcctcgccttca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2504 acgagtaggcgtagtcgatggcgaacgacttcaagaagttggagttcttcctcgccttca 2445 Query: 301 cgtaggagtggccaatgatgtacgccacgccggcctccttcgcctccaagaggtccgaca 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2444 cgtaggagtggccgatgatgtacgccacgccggcctccttcgcctccaagaggtccgaca 2385 Query: 361 gctcgtcacgcacctgcgggttgacctgctcctcctcggcgatctggaaacggacccttc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2384 gctcgtcacgcacctgcgggttgacctgctcctcctcggcgatctggaaacggacccttc 2325 Query: 421 ggcggctcaggctgcccgactcctgctcgtagatggactgcaggctctggagggtctccg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2324 ggcggctcaggctgcccgactcctgctcgtagatggactgcaggctctggagggtccccg 2265 Query: 481 acttgctgctcctggtcagggaggtgccttcgttggagtctctcatgaccagcccggttc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2264 acttgctgctcctggtcagggaggtgccttcgttggagtctctcatgaccagcccggttc 2205 Query: 541 cagttgcgtcagtggtgtgtatgaccgccattcttccttcattcgatgactcatagcttc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2204 cagttgcgtcagtggtgtgtatgaccgccattcttccttcattcgatgactcatagcttc 2145 Query: 601 tagaagaggcggcttcctccgcttccatttggatgaacttggcaatgctcataaccaggt 660 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2144 cagaagaggcggcttcctccgcttccatttggatgaacttggcaatgctcataaccaggt 2085 Query: 661 ggttctcgaagttctcgtcgtctttctgcacatccttataaccatatctcacaatgcacc 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2084 ggttctcgaagttctcgtcgtctttctgcacatccttataaccatatctcacaatgcacc 2025 Query: 721 ggtacatccggtactgcctgggtccgatgcgcccgat 757 ||||||||||||||||||||||||||||||||||||| Sbjct: 2024 ggtacatccggtactgcctgggtccgatgcgcccgat 1988
>dbj|AB256661.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Enchi Length = 2251 Score = 462 bits (233), Expect = e-127 Identities = 324/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 156 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 215 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2194 acgtagtagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2135 Query: 216 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 275 ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2134 gggcctctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2075 Query: 276 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 335 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2074 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2015 Query: 336 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 395 ||||||||||||| |||||| ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2014 tccttcgcctccaggaggtcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 1955 Query: 396 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 449 |||| ||||||||| || ||||| ||||||||||||| | ||||||||||||||| Sbjct: 1954 tcggagatctggaaccgcaccctccgccggcggctcaggccgccccccgactcctgctcg 1895 Query: 450 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 502 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct: 1894 tagatggactgcaggctccggagcgtctccgacttgctgctccgggtcaggga 1842 Score = 133 bits (67), Expect = 9e-28 Identities = 181/219 (82%) Strand = Plus / Minus Query: 530 cagcccggttccagttgcgtcagtggtgtgtatgaccgccattcttccttcattcgatga 589 ||||||||| || || | ||| |||||||| | ||||||||| || ||||| |||| || Sbjct: 1802 cagcccggtgcccgtcgtgtccgtggtgtgcacgaccgccatcctcccttccgtcgacga 1743 Query: 590 ctcatagcttctagaagaggcggcttcctccgcttccatttggatgaacttggcaatgct 649 ||| ||||| | || |||||||| ||||| || ||||| |||||||||||||| ||||| Sbjct: 1742 ctcgtagctccccgacgaggcggcctcctcggcctccatctggatgaacttggcgatgct 1683 Query: 650 cataaccaggtggttctcgaagttctcgtcgtctttctgcacatccttataaccatatct 709 ||| || || |||||||| |||||||||||||| |||||||| ||||| || || || || Sbjct: 1682 catcacgagatggttctcaaagttctcgtcgtccttctgcacgtccttgtacccgtacct 1623 Query: 710 cacaatgcaccggtacatccggtactgcctgggtccgat 748 || ||||| |||||||| ||||||| |||||| ||||| Sbjct: 1622 gacgatgcagcggtacatgcggtactccctggggccgat 1584
>dbj|AB256660.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Nanpi Length = 2423 Score = 462 bits (233), Expect = e-127 Identities = 324/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 156 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 215 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2366 acgtaatagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2307 Query: 216 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 275 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2306 gggcccctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2247 Query: 276 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 335 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2246 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2187 Query: 336 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 395 ||||||||||||| |||||| ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2186 tccttcgcctccaggaggtcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 2127 Query: 396 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 449 |||| ||||||||| || ||||| ||||||||||||| | ||||||||||||||| Sbjct: 2126 tcggagatctggaaccgcaccctccgccggcggctcaggccgccccccgactcctgctcg 2067 Query: 450 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 502 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct: 2066 tagatggactgcaggctccggagcgtctccgacttgctgctccgggtcaggga 2014 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Minus Query: 552 gtggtgtgtatgaccgccattcttccttcattcgatgactcatagcttctagaagaggcg 611 |||||||| | ||||||||| || ||||| |||| ||||| ||||| | || |||||| Sbjct: 1952 gtggtgtgcacgaccgccatcctcccttccgtcgacgactcgtagctccccgacgaggcg 1893 Query: 612 gcttcctccgcttccatttggatgaacttggcaatgctcataaccaggtggttctcgaag 671 || ||||| || ||||| |||||||||||||| |||||||| || ||||||||||||||| Sbjct: 1892 gcctcctcggcctccatctggatgaacttggctatgctcatcacgaggtggttctcgaag 1833 Query: 672 ttctcgtcgtctttctgcacatccttataaccatatctcacaatgcaccggtacatccgg 731 ||||||||||| |||||||| ||||| || || || || || ||||| |||||||| ||| Sbjct: 1832 ttctcgtcgtccttctgcacgtccttgtacccgtacctgacgatgcagcggtacatgcgg 1773 Query: 732 tactgcctgggtccgat 748 |||| |||||| ||||| Sbjct: 1772 tactccctggggccgat 1756
>dbj|AB256659.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Utsunomiya Length = 2431 Score = 446 bits (225), Expect = e-122 Identities = 322/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 156 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 215 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2372 acgtagtagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2313 Query: 216 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 275 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2312 gggcccctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2253 Query: 276 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 335 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2252 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2193 Query: 336 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 395 ||||||||||||| ||| || ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2192 tccttcgcctccaggagatcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 2133 Query: 396 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 449 |||| ||||||||| | ||||| ||||||||||||| | ||||||||||||||| Sbjct: 2132 tcggagatctggaactgcaccctccgccggcggctcaggccgccccccgactcctgctcg 2073 Query: 450 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 502 |||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 2072 tagatggactgcaggctccagagcgtctccgacttgctgctccgggtcaggga 2020 Score = 145 bits (73), Expect = 2e-31 Identities = 184/221 (83%) Strand = Plus / Minus Query: 528 accagcccggttccagttgcgtcagtggtgtgtatgaccgccattcttccttcattcgat 587 ||||||||||| || || | ||| |||||||| | ||||||||| || ||||| |||| Sbjct: 1982 accagcccggtgcccgtcgtgtctgtggtgtgcacgaccgccatcctcccttccgtcgac 1923 Query: 588 gactcatagcttctagaagaggcggcttcctccgcttccatttggatgaacttggcaatg 647 ||||| ||||| | || |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct: 1922 gactcgtagctccccgacgaggcggcctcctcggcctccatctggatgaacttggctatg 1863 Query: 648 ctcataaccaggtggttctcgaagttctcgtcgtctttctgcacatccttataaccatat 707 ||||| || ||||||||||| |||||||||||||| |||||||| ||||| || || || Sbjct: 1862 ctcatcacgaggtggttctcaaagttctcgtcgtccttctgcacgtccttgtacccgtac 1803 Query: 708 ctcacaatgcaccggtacatccggtactgcctgggtccgat 748 || || ||||| |||||||| ||||||| |||||| ||||| Sbjct: 1802 ctgacgatgcagcggtacatgcggtactccctggggccgat 1762
>ref|XM_479449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2346 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Minus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 2339 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 2280 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 2279 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 2220 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 2219 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 2160 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 2159 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 2100 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 2099 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 2040 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 2039 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 1980 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 1979 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 1920 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 1919 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 1863 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 1862 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 1803 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 1802 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 1743 Query: 747 at 748 || Sbjct: 1742 at 1741
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Plus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 28258904 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 28258963 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 28258964 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 28259023 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 28259024 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 28259083 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 28259084 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 28259143 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 28259144 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 28259203 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 28259204 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 28259263 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 28259264 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 28259323 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 28259324 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 28259380 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 28259381 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 28259440 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 28259441 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 28259500 Query: 747 at 748 || Sbjct: 28259501 at 28259502
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Plus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 114449 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 114508 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 114509 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 114568 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 114569 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 114628 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 114629 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 114688 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 114689 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 114748 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 114749 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 114808 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 114809 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 114868 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 114869 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 114925 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 114926 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 114985 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 114986 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 115045 Query: 747 at 748 || Sbjct: 115046 at 115047
>emb|AJ427976.1|OSA427976 Oryza sativa HAK7 gene for putative potasium transporter, exons 1-8 Length = 5189 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Minus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 4686 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 4627 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 4626 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 4567 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 4566 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 4507 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 4506 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 4447 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 4446 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 4387 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 4386 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 4327 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 4326 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 4267 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 4266 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 4210 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 4209 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 4150 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 4149 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 4090 Query: 747 at 748 || Sbjct: 4089 at 4088
>emb|AJ427971.1|OSA427971 Oryza sativa mRNA for putative potasium transporter (HAK7 gene) Length = 2436 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Minus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 2429 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 2370 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 2369 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 2310 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 2309 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 2250 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 2249 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 2190 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 2189 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 2130 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 2129 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 2070 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 2069 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 2010 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 2009 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 1953 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 1952 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 1893 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 1892 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 1833 Query: 747 at 748 || Sbjct: 1832 at 1831
>dbj|AK059797.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E12, full insert sequence Length = 1057 Score = 438 bits (221), Expect = e-119 Identities = 508/602 (84%), Gaps = 15/602 (2%) Strand = Plus / Minus Query: 159 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 218 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 807 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 748 Query: 219 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 278 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 747 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 688 Query: 279 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 338 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 687 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 628 Query: 339 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 398 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 627 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 568 Query: 399 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 455 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 567 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 508 Query: 456 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct------ 509 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 507 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcctgaagcc 448 Query: 510 tcg---ttggagtctctcatgaccagcccggttccagttgcgtcagtggtgtgtatgacc 566 ||| |||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 447 tcgttattggagtccctcatcaccagaccggtgccggttgtgtcctctgtgtgtatgaca 388 Query: 567 gccattcttccttcattcgatgactcatagcttctagaagaggcggcttcctccgcttcc 626 ||||| || ||||| ||| || || ||||| | ||| ||||| || ||||| |||||| Sbjct: 387 gccatcctcccttc---cgaagattcgtagctcccagaggaggctgcctcctcggcttcc 331 Query: 627 atttggatgaacttggcaatgctcataaccaggtggttctcgaagttctcgtcgtctttc 686 |||||||||||||||||||||||||| |||| ||||||||| ||||||||||| |||||| Sbjct: 330 atttggatgaacttggcaatgctcatcaccaagtggttctcaaagttctcgtcatctttc 271 Query: 687 tgcacatccttataaccatatctcacaatgcaccggtacatccggtactgcctgggtccg 746 |||||||| || || ||||| ||||| |||||||||||||| ||||| | |||||| ||| Sbjct: 270 tgcacatctttgtagccatacctcacgatgcaccggtacatacggtattccctggggccg 211 Query: 747 at 748 || Sbjct: 210 at 209
>gb|AY104525.1| Zea mays PCO106353 mRNA sequence Length = 1115 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 152 ctaaacgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcac 211 |||||| |||||||||||||| || || || || || ||||| || ||||||||||| || Sbjct: 842 ctaaacatagtagatcatgcccacttctatcagactaatgtgtggaatgtgcagcgtaac 783 Query: 212 cgatgggcccctgcagttcttgcgaaggaacgagtag 248 ||||| || ||||||||||| || ||||| |||||| Sbjct: 782 tgatggacctctgcagttcttccggaggaaagagtag 746 Score = 50.1 bits (25), Expect = 0.011 Identities = 40/45 (88%) Strand = Plus / Minus Query: 686 ctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 ||||||||| || ||||||||||| || ||||| ||||||||||| Sbjct: 299 ctgcacatctttgtaaccatatctaacgatgcaacggtacatccg 255
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 150545 actagacgtagtagatcatgccgacttcgataaggctgatgtg 150587 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 150680 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 150739 Query: 346 cca 348 ||| Sbjct: 150740 cca 150742
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 88155 actagacgtagtagatcatgccgacttcgataaggctgatgtg 88197 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 88290 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 88349 Query: 346 cca 348 ||| Sbjct: 88350 cca 88352
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 15134493 actagacgtagtagatcatgccgacttcgataaggctgatgtg 15134535 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 15134628 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 15134687 Query: 346 cca 348 ||| Sbjct: 15134688 cca 15134690 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Minus Query: 198 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 248 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 41058572 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 41058522 Score = 44.1 bits (22), Expect = 0.67 Identities = 40/46 (86%) Strand = Plus / Minus Query: 685 tctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 |||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 41058076 tctgaacatctttgtaaccatacctaacaatgcagcggtacatccg 41058031
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 106459 actagacgtagtagatcatgccgacttcgataaggctgatgtg 106501 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 106594 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 106653 Query: 346 cca 348 ||| Sbjct: 106654 cca 106656
>emb|AJ427974.1|OSA427974 Oryza sativa HAK3 gene for putative potasium transporter, exons 1-6 Length = 3777 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 3282 actagacgtagtagatcatgccgacttcgataaggctgatgtg 3240 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 3147 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 3088 Query: 346 cca 348 ||| Sbjct: 3087 cca 3085
>dbj|AK100340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N10, full insert sequence Length = 2159 Score = 61.9 bits (31), Expect = 3e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 151 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1947 actagacgtagtagatcatgccgacttcgataaggctgatgtg 1905 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 1812 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 1753 Query: 346 cca 348 ||| Sbjct: 1752 cca 1750
>ref|NM_193825.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 156 acgtagtagatcatgccgacctcgatgaggctgatgtg 193 |||||||||||||||||||| ||||| ||||||||||| Sbjct: 2417 acgtagtagatcatgccgacttcgataaggctgatgtg 2380 Score = 54.0 bits (27), Expect = 7e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 286 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 345 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 2287 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 2228 Query: 346 cca 348 ||| Sbjct: 2227 cca 2225
>emb|AJ427293.1|CNO427293 Cymodocea nodosa mRNA for putative potassium transporter (hak2 gene) Length = 2613 Score = 58.0 bits (29), Expect = 4e-05 Identities = 95/117 (81%) Strand = Plus / Minus Query: 612 gcttcctccgcttccatttggatgaacttggcaatgctcataaccaggtggttctcgaag 671 |||||||| |||||||| || ||||||| ||||||||||| ||||| || || || ||| Sbjct: 1933 gcttcctcggcttccatctgaatgaactctgcaatgctcatcaccagctgattttcaaag 1874 Query: 672 ttctcgtcgtctttctgcacatccttataaccatatctcacaatgcaccggtacatc 728 | || ||||| |||| || ||||| || |||||||| | |||||||| ||||||| Sbjct: 1873 tcatcatcgtccttctttacgtccttgtatccatatctaataatgcacctgtacatc 1817 Score = 50.1 bits (25), Expect = 0.011 Identities = 49/57 (85%) Strand = Plus / Minus Query: 438 gactcctgctcgtagatggactgcaggctctggagggtctccgacttgctgctcctg 494 |||||||||||||| | ||||||| |||||| | || |||||||||||||||||| Sbjct: 2122 gactcctgctcgtacagcgactgcaagctctgcaatgtttccgacttgctgctcctg 2066
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Plus Query: 294 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 337 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 24854829 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 24854872 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 318 atgtacgccacgccggcctccttcgcctcca 348 ||||||| |||||||||||||||| |||||| Sbjct: 27443314 atgtacgacacgccggcctccttctcctcca 27443284
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Plus Query: 294 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 337 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 65912 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 65955
>emb|AJ427979.1|OSA427979 Oryza sativa HAK10 gene for putative potasium transporter, exons 1-9 Length = 5051 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Minus Query: 294 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 337 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 4413 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 4370
>emb|AJ427972.1|OSA427972 Oryza sativa mRNA for putative potasium transporter (HAK10 gene) Length = 2532 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Minus Query: 294 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 337 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 2390 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 2347
>dbj|AK107132.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C06, full insert sequence Length = 1560 Score = 48.1 bits (24), Expect = 0.043 Identities = 39/44 (88%) Strand = Plus / Minus Query: 294 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 337 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 1415 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 1372
>ref|NM_190057.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2352 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Minus Query: 198 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 248 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2306 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2256 Score = 44.1 bits (22), Expect = 0.67 Identities = 40/46 (86%) Strand = Plus / Minus Query: 685 tctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 |||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 1810 tctgaacatctttgtaaccatacctaacaatgcagcggtacatccg 1765
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Minus Query: 198 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 248 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 95502 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 95452 Score = 44.1 bits (22), Expect = 0.67 Identities = 40/46 (86%) Strand = Plus / Minus Query: 685 tctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 |||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 95006 tctgaacatctttgtaaccatacctaacaatgcagcggtacatccg 94961
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 318 atgtacgccacgccggcctccttcgcctcca 348 ||||||| |||||||||||||||| |||||| Sbjct: 12872 atgtacgacacgccggcctccttctcctcca 12842
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 318 atgtacgccacgccggcctccttcgcctcca 348 ||||||| |||||||||||||||| |||||| Sbjct: 62383 atgtacgacacgccggcctccttctcctcca 62353
>dbj|AK111663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156F08, full insert sequence Length = 2751 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 318 atgtacgccacgccggcctccttcgcctcca 348 ||||||| |||||||||||||||| |||||| Sbjct: 2429 atgtacgacacgccggcctccttctcctcca 2399
>emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for putative potasium transporter Length = 5989 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 318 atgtacgccacgccggcctccttcgcctcca 348 ||||||| |||||||||||||||| |||||| Sbjct: 5940 atgtacgacacgccggcctccttctcctcca 5910
>dbj|AK071411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091C23, full insert sequence Length = 2663 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Minus Query: 198 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 248 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2153 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2103 Score = 44.1 bits (22), Expect = 0.67 Identities = 40/46 (86%) Strand = Plus / Minus Query: 685 tctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 |||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 1657 tctgaacatctttgtaaccatacctaacaatgcagcggtacatccg 1612
>dbj|AK070575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A03, full insert sequence Length = 2941 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Minus Query: 198 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 248 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2405 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2355 Score = 44.1 bits (22), Expect = 0.67 Identities = 40/46 (86%) Strand = Plus / Minus Query: 685 tctgcacatccttataaccatatctcacaatgcaccggtacatccg 730 |||| ||||| || |||||||| || |||||||| ||||||||||| Sbjct: 1909 tctgaacatctttgtaaccatacctaacaatgcagcggtacatccg 1864
>gb|AF083397.1|AF083397 Tribonema intermixtum 18S small subunit ribosomal RNA gene, partial sequence Length = 1830 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 cggctcaggctgcccgactcctg 445 ||||||||||||||||||||||| Sbjct: 675 cggctcaggctgcccgactcctg 697
>gb|U41648.1|BSU41648 Botrydium stoloniferum nuclear 18S ribosomal RNA gene Length = 1807 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 423 cggctcaggctgcccgactcctg 445 ||||||||||||||||||||||| Sbjct: 667 cggctcaggctgcccgactcctg 689
>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence Length = 152722 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Plus Query: 622 cttccatttggatgaacttggcaatg 647 ||||||||||| |||||||||||||| Sbjct: 9332 cttccatttggttgaacttggcaatg 9357
>gb|AC009716.22| Homo sapiens chromosome 18, clone RP11-504I13, complete sequence Length = 211981 Score = 44.1 bits (22), Expect = 0.67 Identities = 25/26 (96%) Strand = Plus / Plus Query: 622 cttccatttggatgaacttggcaatg 647 ||||||||||| |||||||||||||| Sbjct: 206953 cttccatttggttgaacttggcaatg 206978
>ref|NM_111071.1| Arabidopsis thaliana KUP3; potassium ion transporter AT3G02050 (KUP3) mRNA, complete cds Length = 2656 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2486 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2446
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 55203 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 55243
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence Length = 195538 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 tctccgacttgctgctcctgg 495 ||||||||||||||||||||| Sbjct: 174598 tctccgacttgctgctcctgg 174618
>gb|AY062747.1| Arabidopsis thaliana putative potassium transporter (F1C9.17) mRNA, complete cds Length = 2779 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2568 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2528
>emb|BX822216.1|CNS0A4RD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2630 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2471 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2431
>gb|BT003375.1| Arabidopsis thaliana putative potassium transporter (At3g02050) mRNA, complete cds Length = 2534 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2369 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2329
>gb|AF207621.2|AF207621 Arabidopsis thaliana potassium transporter KUP3p (KUP3) mRNA, complete cds Length = 2697 Score = 42.1 bits (21), Expect = 2.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 153 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 193 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2489 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2449 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,725,221 Number of Sequences: 3902068 Number of extensions: 4725221 Number of successful extensions: 86455 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 45 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86208 Number of HSP's gapped (non-prelim): 235 length of query: 757 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 734 effective length of database: 17,143,297,704 effective search space: 12583180514736 effective search space used: 12583180514736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)
