ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd1l15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009213.1| Triticum aestivum clone wle1n.pk0057.g6:fis, full insert mRNA sequence Length = 1405 Score = 753 bits (380), Expect = 0.0 Identities = 537/586 (91%), Gaps = 10/586 (1%) Strand = Plus / Minus Query: 99 agaatcttcggtttcccttcgtgatctcgggtacgaatgctacaaacacataggcaccgg 158 |||||| || ||||| |||| ||||||||||||||||||||| || |||||||||||||| Sbjct: 1276 agaatcctcagtttcgcttc-tgatctcgggtacgaatgctataagcacataggcaccgg 1218 Query: 159 tgtccgctgtttctggcactacaggtttagttcagtctggcga--catcaaagccagtag 216 |||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||| Sbjct: 1217 tgtctgctgtttctggtactacaggttcagttcagtctggcgagacatcaaagccagta- 1159 Query: 217 tacattttattgtggagcacgacgatgcctcgatgccccacggcataaccggattggggg 276 |||||||||| |||||||||||| ||||||||||||| | ||| |||||| || || | Sbjct: 1158 --cattttattgcggagcacgacgacgcctcgatgccccgcagcacaaccgggtttggag 1101 Query: 277 gcaacggaagcggtcgaacaaaaattgcatgagttcaagtgtgaaccatt----ataggc 332 |||||| |||||| ||||||||||||||||||||||||||||||||| || |||||| Sbjct: 1100 gcaacgaaagcggccgaacaaaaattgcatgagttcaagtgtgaaccgttcgatataggc 1041 Query: 333 tgggcaggtcgccgcctagctctcctgcgcaaacttgacacccttctcgatggaagacag 392 || ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1040 tgagcaggtcgccgcctagctctcctgcgcgaacttgacccccttctcgatggaagacag 981 Query: 393 cagctcgcccttgaggctttccagcccctccttctccaaggccgatagctcgcccagccc 452 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 980 cagctcgcccttgaggctctccagcccctccttctccaaggccgacagctcgcccagccc 921 Query: 453 aagcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactc 512 | ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| Sbjct: 920 catcacttcctccactccactcttgcccagcctcaccttggaggcaaagaatggcagctc 861 Query: 513 tgttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagcccctt 572 |||||| ||||||||||||||||||||||||| ||||||||||| || ||||||||||| Sbjct: 860 tgttacggttgattggacaaaagagcactctacaatgtcaggaacaccgttgagcccctt 801 Query: 573 caagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagccctt 632 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 caagcatgcatctccaaaaactgcaccagcatatgccatcgacaatgttgctgagccctt 741 Query: 633 tccagcttttgcttcaacaacttccgtcccaccatcctgtgtcctc 678 |||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 740 tccagccttcgcttcaacaacttccgtcccaccatcttgtgtcctc 695
>ref|XM_475913.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 297 bits (150), Expect = 2e-77 Identities = 276/318 (86%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 1010 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 951 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| || | || |||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 950 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 891 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||||||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||| Sbjct: 890 agccttacctttgaggcgaagaatggcagctctgttactgttgattgcacaaaagagcac 831 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 |||| | |||||||||||||| |||||||||||||| || ||| | || || |||||| Sbjct: 830 tctacaacatcaggaactccattaagccccttcaagcacgcatctgcaaataccgcacca 771 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 770 gcatatgccatagacaatgttgcagaaccctttccagcctttgcttcaacaacttccgtc 711 Query: 661 ccaccatcctgtgtcctc 678 |||||||| ||||||||| Sbjct: 710 ccaccatcttgtgtcctc 693
>dbj|AK073698.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057I02, full insert sequence Length = 1303 Score = 297 bits (150), Expect = 2e-77 Identities = 276/318 (86%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 1067 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 1008 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| || | || |||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 1007 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 948 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||||||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||| Sbjct: 947 agccttacctttgaggcgaagaatggcagctctgttactgttgattgcacaaaagagcac 888 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 |||| | |||||||||||||| |||||||||||||| || ||| | || || |||||| Sbjct: 887 tctacaacatcaggaactccattaagccccttcaagcacgcatctgcaaataccgcacca 828 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 827 gcatatgccatagacaatgttgcagaaccctttccagcctttgcttcaacaacttccgtc 768 Query: 661 ccaccatcctgtgtcctc 678 |||||||| ||||||||| Sbjct: 767 ccaccatcttgtgtcctc 750
>gb|BT016719.1| Zea mays clone Contig552 mRNA sequence Length = 1581 Score = 289 bits (146), Expect = 6e-75 Identities = 275/318 (86%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1179 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1120 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 | |||||| || | ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 1119 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1060 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1059 agccgaaccttggaggcaaagaatggcaactctgtcacagttgattgcacaaaagagcac 1000 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 |||| ||||| ||||||||||| || |||||||| ||||| ||| | ||||| |||||| Sbjct: 999 tctacaatgtctggaactccattcagacccttcaaacatgcatctgcaaaaacagcacca 940 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||||||||| ||||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 939 gcatatgccatggacaacgttgcagagccttttcccgcctttgcttcaaccacctctgtc 880 Query: 661 ccaccatcctgtgtcctc 678 |||||||| ||||||||| Sbjct: 879 ccaccatcttgtgtcctc 862
>gb|AY103861.1| Zea mays PCO062153 mRNA sequence Length = 1633 Score = 289 bits (146), Expect = 6e-75 Identities = 275/318 (86%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||| |||||||||||| ||||||||||||||| ||||||||||| Sbjct: 1178 gcaaacttgatacccttgtcgatggaagacttgagctcgcccttgaggttttccagcccc 1119 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 | |||||| || | ||||| ||||| |||||||||||||||||||| ||||||| Sbjct: 1118 ttcttctcgaactcgttgagctcacccagaccaagcacttcctccactccattcttgccg 1059 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 |||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1058 agccgaaccttggaggcaaagaatggcaactctgtcacagttgattgcacaaaagagcac 999 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 |||| ||||| ||||||||||| || |||||||| ||||| ||| | ||||| |||||| Sbjct: 998 tctacaatgtctggaactccattcagacccttcaaacatgcatctgcaaaaacagcacca 939 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||||||||| ||||| ||||| ||||| ||||| || ||||||||||| || || ||| Sbjct: 938 gcatatgccatggacaacgttgcagagccttttcccgcctttgcttcaaccacctctgtc 879 Query: 661 ccaccatcctgtgtcctc 678 |||||||| ||||||||| Sbjct: 878 ccaccatcttgtgtcctc 861
>gb|BT016218.1| Zea mays clone Contig51 mRNA sequence Length = 1263 Score = 234 bits (118), Expect = 3e-58 Identities = 268/318 (84%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| ||||||||| || |||||| ||||||| |||||| | |||| ||| Sbjct: 973 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 914 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 || ||||| ||| |||| ||||| || | |||||||||||||| ||||| |||| || Sbjct: 913 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 854 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||||||||| || ||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 853 agccttaccttagatgcaaagaatggaagctctgttacagttgattgaacaaaagagcac 794 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | || || |||||||||||||| |||||||||||||| ||| | ||||| |||||| Sbjct: 793 tcaacaatatccggaactccattgagacccttcaagcatgcatctgcaaaaacagcacca 734 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 733 gcatacgccatggacaaggttgcagagcccttcccagcctttgcctcgacaacttcagtt 674 Query: 661 ccaccatcctgtgtcctc 678 |||||||||||||||||| Sbjct: 673 ccaccatcctgtgtcctc 656
>gb|AY108006.1| Zea mays PCO144615 mRNA sequence Length = 701 Score = 234 bits (118), Expect = 3e-58 Identities = 268/318 (84%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| ||||||||| || |||||| ||||||| |||||| | |||| ||| Sbjct: 423 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 364 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 || ||||| ||| |||| ||||| || | |||||||||||||| ||||| |||| || Sbjct: 363 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 304 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||||||||| || ||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 303 agccttaccttagatgcaaagaatggaagctctgttacagttgattgaacaaaagagcac 244 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | || || |||||||||||||| |||||||||||||| ||| | ||||| |||||| Sbjct: 243 tcaacaatatccggaactccattgagacccttcaagcatgcatctgcaaaaacagcacca 184 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 183 gcatacgccatggacaaggttgcagagcccttcccagcctttgcctcgacaacttcagtt 124 Query: 661 ccaccatcctgtgtcctc 678 |||||||||||||||||| Sbjct: 123 ccaccatcctgtgtcctc 106
>gb|BT017838.1| Zea mays clone EL01N0509G03.c mRNA sequence Length = 1337 Score = 226 bits (114), Expect = 7e-56 Identities = 267/318 (83%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| ||||||||| || |||||| ||||||| |||||| | |||| ||| Sbjct: 1039 gcaaacttgatacccttctcaatcgaagacttgagctcgctcttgagcttctccaaccct 980 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 || ||||| ||| |||| ||||| || | |||||||||||||| ||||| |||| || Sbjct: 979 tctttctcaaagtccgacagctcacctaatccaagcacttcctcaactccattcttccca 920 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||||||||| | ||||||||||| | |||||||||||||||||| |||||||||||| Sbjct: 919 agccttaccttaaatgcaaagaatggaagctctgttacagttgattgaacaaaagagcac 860 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | || || |||||||||||||| |||||||||||||| ||| | ||||| |||||| Sbjct: 859 tcaacaatatccggaactccattgagacccttcaagcatgcatctgcaaaaacagcacca 800 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||| ||||| ||||| || |||||||| || Sbjct: 799 gcatacgccatggacaaggttgcagagcccttcccagcctttgcctcgacaacttcagtt 740 Query: 661 ccaccatcctgtgtcctc 678 |||||||||||||||||| Sbjct: 739 ccaccatcctgtgtcctc 722
>ref|NM_192352.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1023 Score = 218 bits (110), Expect = 2e-53 Identities = 263/314 (83%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 1013 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 954 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||| || Sbjct: 953 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 894 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 893 agcttcaccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcat 834 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | | ||| || |||||||| || ||||| ||||| || | | ||||||| |||||| Sbjct: 833 tcaacaacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcacca 774 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 773 gcatacgccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtc 714 Query: 661 ccaccatcctgtgt 674 |||||||||||||| Sbjct: 713 ccaccatcctgtgt 700
>gb|AF444195.1| Oryza sativa malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1257 Score = 218 bits (110), Expect = 2e-53 Identities = 263/314 (83%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 1029 gcaaatttgatacccttctcaattgaagccttaagctcgcccttaagattctccagtcct 970 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||| || Sbjct: 969 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 910 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 909 agcttcaccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcat 850 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | | ||| || |||||||| || ||||| ||||| || | | ||||||| |||||| Sbjct: 849 tcaacaacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcacca 790 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 789 gcatacgccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtc 730 Query: 661 ccaccatcctgtgt 674 |||||||||||||| Sbjct: 729 ccaccatcctgtgt 716
>dbj|AK104770.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A07, full insert sequence Length = 1279 Score = 218 bits (110), Expect = 2e-53 Identities = 263/314 (83%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 1071 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1012 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||| || Sbjct: 1011 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 952 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 951 agcttcaccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcat 892 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | | ||| || |||||||| || ||||| ||||| || | | ||||||| |||||| Sbjct: 891 tcaacaacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcacca 832 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 831 gcatacgccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtc 772 Query: 661 ccaccatcctgtgt 674 |||||||||||||| Sbjct: 771 ccaccatcctgtgt 758
>dbj|AK071699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108E15, full insert sequence Length = 1369 Score = 218 bits (110), Expect = 2e-53 Identities = 263/314 (83%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 1145 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 1086 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| |||| || Sbjct: 1085 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactccattcttccca 1026 Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||| | |||||||||||||||||||||| |||||||||||||||||| ||||||||||| Sbjct: 1025 agcttcaccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcat 966 Query: 541 tctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcacca 600 || | | ||| || |||||||| || ||||| ||||| || | | ||||||| |||||| Sbjct: 965 tcaacaacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcacca 906 Query: 601 gcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtc 660 ||||| ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 905 gcatacgccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtc 846 Query: 661 ccaccatcctgtgt 674 |||||||||||||| Sbjct: 845 ccaccatcctgtgt 832
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 111 bits (56), Expect = 3e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 487 accttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctatg 546 ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||||||| Sbjct: 182465 acctttgaggcgaagaatggcagctctgttactgttgattgcacaaaagagcactctaca 182524 Query: 547 atgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcatat 606 | |||||||||||||| |||||||||||||| || ||| | || || |||||||||||| Sbjct: 182525 acatcaggaactccattaagccccttcaagcacgcatctgcaaataccgcaccagcatat 182584 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 183457 gccatagacaatgttgcagaaccctttccagcctttgcttcaacaacttccgtcccacca 183516 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 183517 tcttgtgtcctc 183528 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 181852 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 181911 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| || | || |||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 181912 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 181971 Query: 481 agccttacct 490 |||||||||| Sbjct: 181972 agccttacct 181981
>gb|AC098832.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1268_B08, complete sequence Length = 119500 Score = 111 bits (56), Expect = 3e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 487 accttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctatg 546 ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||||||| Sbjct: 33147 acctttgaggcgaagaatggcagctctgttactgttgattgcacaaaagagcactctaca 33206 Query: 547 atgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcatat 606 | |||||||||||||| |||||||||||||| || ||| | || || |||||||||||| Sbjct: 33207 acatcaggaactccattaagccccttcaagcacgcatctgcaaataccgcaccagcatat 33266 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 34139 gccatagacaatgttgcagaaccctttccagcctttgcttcaacaacttccgtcccacca 34198 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 34199 tcttgtgtcctc 34210 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 32534 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 32593 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| || | || |||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 32594 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 32653 Query: 481 agccttacct 490 |||||||||| Sbjct: 32654 agccttacct 32663
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 111 bits (56), Expect = 3e-21 Identities = 104/120 (86%) Strand = Plus / Plus Query: 487 accttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctatg 546 ||||| ||||| |||||||||| ||||||||| |||||||| |||||||||||||||| Sbjct: 28398223 acctttgaggcgaagaatggcagctctgttactgttgattgcacaaaagagcactctaca 28398282 Query: 547 atgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcatat 606 | |||||||||||||| |||||||||||||| || ||| | || || |||||||||||| Sbjct: 28398283 acatcaggaactccattaagccccttcaagcacgcatctgcaaataccgcaccagcatat 28398342 Score = 103 bits (52), Expect = 7e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| Sbjct: 28399215 gccatagacaatgttgcagaaccctttccagcctttgcttcaacaacttccgtcccacca 28399274 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 28399275 tcttgtgtcctc 28399286 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 28397610 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 28397669 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactccgctcttgccc 480 |||||||| || | || |||| |||||||||||| ||||||||||||||| ||||||| Sbjct: 28397670 tccttctcaaactcggaaagctggcccagcccaagtacttcctccactccgttcttgcca 28397729 Query: 481 agccttacct 490 |||||||||| Sbjct: 28397730 agccttacct 28397739
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 486 taccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctat 545 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || | Sbjct: 26186855 taccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcattcaac 26186796 Query: 546 gatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcata 605 | ||| || |||||||| || ||||| ||||| || | | ||||||| ||||||||||| Sbjct: 26186795 aacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcaccagcata 26186736 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 26186630 gccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtcccacca 26186571 Query: 667 tcctgtgt 674 |||||||| Sbjct: 26186570 tcctgtgt 26186563 Score = 44.1 bits (22), Expect = 0.59 Identities = 88/110 (80%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 26187887 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 26187828 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 470 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| Sbjct: 26187827 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 26187778
>dbj|AP003340.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1316_H05 Length = 105346 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 486 taccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctat 545 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || | Sbjct: 92272 taccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcattcaac 92213 Query: 546 gatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcata 605 | ||| || |||||||| || ||||| ||||| || | | ||||||| ||||||||||| Sbjct: 92212 aacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcaccagcata 92153 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 92047 gccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtcccacca 91988 Query: 667 tcctgtgt 674 |||||||| Sbjct: 91987 tcctgtgt 91980
>dbj|AP003053.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047B08 Length = 57846 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 486 taccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcactctat 545 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| || | Sbjct: 27985 taccttggaggcaaagaatggcagctctgttacagttgattgcacaaaagagcattcaac 27926 Query: 546 gatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaactgcaccagcata 605 | ||| || |||||||| || ||||| ||||| || | | ||||||| ||||||||||| Sbjct: 27925 aacgtccggcactccattcagaccctttaagcaagcatttgcgaaaacagcaccagcata 27866 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 27760 gccatggacaaggttgcagagccctttccagcctttgcttcaacaacttcagtcccacca 27701 Query: 667 tcctgtgt 674 |||||||| Sbjct: 27700 tcctgtgt 27693 Score = 44.1 bits (22), Expect = 0.59 Identities = 88/110 (80%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 29017 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 28958 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 470 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| Sbjct: 28957 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 28908
>emb|X78800.1|EGMMDH E.gunnii mRNA for mitochondrial malate dehydrogenase Length = 1375 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttcc 657 |||||||| ||||| ||||||||||| || ||||||||||| |||||||| || |||||| Sbjct: 854 ccagcatacgccatggacaatgttgcagatccctttccagcctttgcttccacgacttcc 795 Query: 658 gtcccaccatcctgtgt 674 ||||| ||||| ||||| Sbjct: 794 gtccctccatcttgtgt 778
>ref|NM_112364.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT3G15020 mRNA, complete cds Length = 1396 Score = 75.8 bits (38), Expect = 2e-10 Identities = 173/218 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 986 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 927 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 926 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 867 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 866 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 807 Query: 634 ccagcttttgcttcaacaacttccgtcccaccatcctg 671 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 806 ccagcttttgcctccacgacttctgtccctccgtcctg 769
>gb|AY093788.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1026 Score = 75.8 bits (38), Expect = 2e-10 Identities = 173/218 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 923 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 864 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 863 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 804 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 803 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 744 Query: 634 ccagcttttgcttcaacaacttccgtcccaccatcctg 671 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 743 ccagcttttgcctccacgacttctgtccctccgtcctg 706
>gb|AY045592.1| Arabidopsis thaliana AT3g15020/K15M2_16 mRNA, complete cds Length = 1396 Score = 75.8 bits (38), Expect = 2e-10 Identities = 173/218 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 986 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 927 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 926 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 867 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 866 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 807 Query: 634 ccagcttttgcttcaacaacttccgtcccaccatcctg 671 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 806 ccagcttttgcctccacgacttctgtccctccgtcctg 769
>emb|BX824867.1|CNS0A5NF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZA08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1302 Score = 75.8 bits (38), Expect = 2e-10 Identities = 173/218 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 964 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 905 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 904 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 845 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 844 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 785 Query: 634 ccagcttttgcttcaacaacttccgtcccaccatcctg 671 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 784 ccagcttttgcctccacgacttctgtccctccgtcctg 747
>emb|BX824034.1|CNS0A5H3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH17ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1232 Score = 75.8 bits (38), Expect = 2e-10 Identities = 173/218 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 971 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 912 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 911 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 852 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 851 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 792 Query: 634 ccagcttttgcttcaacaacttccgtcccaccatcctg 671 ||||||||||| || || ||||| ||||| || ||||| Sbjct: 791 ccagcttttgcctccacgacttctgtccctccgtcctg 754
>emb|X89451.1|BNMDHGENE B.napus mRNA for mitochondrial malate dehydrogenase Length = 1202 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 559 ccattgagccccttcaagcatgcgtctccgaaaactgcaccagcatatgccatcgacaat 618 |||||||| ||||||||||||||||| |||| | ||| |||||||| ||||| |||||| Sbjct: 856 ccattgagtcccttcaagcatgcgtcagcgaatagtgctccagcatacgccattgacaat 797 Query: 619 gttgctga 626 || ||||| Sbjct: 796 gtagctga 789
>gb|AY089112.1| Arabidopsis thaliana clone 34499 mRNA, complete sequence Length = 1302 Score = 61.9 bits (31), Expect = 3e-06 Identities = 148/187 (79%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttaccttggaggcaaagaatggcaactct 513 |||||||||||||||||| |||| ||||| |||||||| ||||| ||||| || | ||| Sbjct: 984 agcacttcctccactccgttctttcccagtcttacctttgaggcgaagaaaggaagctcg 925 Query: 514 gttacagttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttc 573 || | || |||||||| || ||||| || | | | ||||| || ||||| ||||| Sbjct: 924 gtgatggtagattggacgaatgagcattccaccacatttggaacaccgttgagtcccttt 865 Query: 574 aagcatgcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagcccttt 633 |||||||| || | || | ||| || ||||| ||||| |||||||| ||||| |||||| Sbjct: 864 aagcatgcatcagcaaagagtgctcccgcataggccattgacaatgtagctgaacccttt 805 Query: 634 ccagctt 640 ||||||| Sbjct: 804 ccagctt 798
>dbj|AP000370.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K15M2 Length = 79279 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| |||||||| ||||| ||||||||||||||||| || || ||||| ||||| || Sbjct: 53452 gccattgacaatgtagctgaaccctttccagcttttgcctccacgacttctgtccctccg 53393 Query: 667 tcctg 671 ||||| Sbjct: 53392 tcctg 53388 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 454 agcacttcctccactccgctcttgcccagccttacct 490 |||||||||||||||||| |||| ||||| ||||||| Sbjct: 53870 agcacttcctccactccgttctttcccagtcttacct 53834
>gb|AY725474.1| Lycopersicon esculentum mitochondrial malate dehydrogenase (mMDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1041 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 628 ccctttccagcttttgcttcaacaacttccgtcccaccatc 668 |||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 761 ccctttccagctttggcttctacaacttctgtcccaccatc 721
>gb|AF180335.1| Glycine max malate dehydrogenase (Mdh1) gene, complete cds; nuclear gene for mitochondrial product Length = 27588 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||| ||||| || ||||||||||| || ||||| |||||||| || || ||| Sbjct: 9904 gccattgacaaagttgcagaaccctttccagccttagcttctacaacttctgttcctcca 9845 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 9844 tcttgtgtcctc 9833
>gb|AY630925.1| Rosa roxburghii NAD-dependent malate dehydrogenase-like mRNA, partial sequence; mitochondrial Length = 1024 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 608 ccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccaccat 667 |||| |||||||| || || |||||||||||||| ||||| |||||||| ||||| || | Sbjct: 505 ccatagacaatgtagcagatccctttccagctttggcttccacaacttctgtccctccgt 446 Query: 668 cctg 671 |||| Sbjct: 445 cctg 442
>dbj|AP006654.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT31E21, TM0340, complete sequence Length = 120480 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||||||||| || ||||| ||||| || ||||| |||||||| || || ||| Sbjct: 32123 gccattgacaatgttgcagaacccttgccagccttagcttccacaacttctgttcctcca 32182 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 32183 tcttgtgtcctc 32194 Score = 56.0 bits (28), Expect = 2e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 607 gccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccgtcccacca 666 ||||| ||||||||||| || ||||| ||||| || ||||| |||||||| || || ||| Sbjct: 12147 gccattgacaatgttgcagaacccttgccagccttagcttccacaacttctgttcctcca 12206 Query: 667 tcctgtgtcctc 678 || ||||||||| Sbjct: 12207 tcttgtgtcctc 12218
>ref|NM_104202.2| Arabidopsis thaliana malate dehydrogenase AT1G53240 mRNA, complete cds Length = 1512 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 977 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 918 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 917 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 868
>gb|AF339684.1| Arabidopsis thaliana putative mitochondrial NAD-dependent malate dehydrogenase (At1g53240) mRNA, complete cds Length = 1076 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 842 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 783 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 782 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 733
>emb|AJ488944.1|STU488944 Solanum tuberosum mRNA for putative mitochondrial NAD-dependent malate dehydrogenase (mMDH gene), clone cSTB36K15 Length = 1142 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaact 654 ||||||||||| |||||||| | || ||||| ||||||||||| || || || |||||| Sbjct: 829 gcaccagcataggccatcgagagggtggctgaaccctttccagccttggcctccacaact 770 Query: 655 tccgtcccaccatc 668 || || |||||||| Sbjct: 769 tcagtgccaccatc 756
>emb|AJ131205.1|ATH131205 Arabidopsis thaliana mRNA for mitochondrial NAD-dependent malate dehydrogenase Length = 1265 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 933 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 874 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 873 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 824
>gb|AY128783.1| Arabidopsis thaliana similar to mitochondrial NAD-dependent malate dehydrogenase (At1g53240) mRNA, complete cds Length = 1273 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 842 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 783 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 782 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 733
>gb|AF324670.2| Arabidopsis thaliana At1g53240 (At1g53240/F12M16_14) mRNA, complete cds Length = 1336 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 900 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 841 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 840 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 791
>gb|AY062580.1| Arabidopsis thaliana similar to mitochondrial NAD-dependent malate dehydrogenase (At1g53240; F12M16.14) mRNA, complete cds Length = 1440 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 952 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 893 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 892 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 843
>gb|DQ062223.1| Lysiphlebus testaceipes mitochondrial malate dehydrogenase (mMDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1023 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaact 654 ||||||||||||||||| || ||||| ||||| || | |||||||| |||| ||||||| Sbjct: 776 gcaccagcatatgccattgataatgtagctgatccagtaccagctttagctttaacaact 717 Query: 655 tc 656 || Sbjct: 716 tc 715
>emb|BX815069.1|CNS0AAOE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS30ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 966 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 907 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 906 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 857
>gb|AY166633.1| Pisum sativum putative malate dehydrogenase (MDH) mRNA, complete cds Length = 1249 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 634 ccagcttttgcttcaacaacttccgtcccaccat 667 ||||||||||| ||||||||||| |||||||||| Sbjct: 838 ccagcttttgcctcaacaacttctgtcccaccat 805
>gb|AY087304.1| Arabidopsis thaliana clone 33917 mRNA, complete sequence Length = 1239 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 535 gagcactctatgatgtcaggaactccattgagccccttcaagcatgcgtctccgaaaact 594 ||||| ||||||| || ||||| || ||||| || ||||||||||| || |||| | | Sbjct: 977 gagcattctatgacatctggaacaccgttgagtcctttcaagcatgcatcagcgaacaat 918 Query: 595 gcaccagcatatgccatcgacaatgttgctgagccctttccagcttttgc 644 || || ||||| ||||| |||||||| ||||| || ||||| |||||||| Sbjct: 917 gctccggcataggccatggacaatgtagctgaaccttttcctgcttttgc 868
>gb|DQ083216.1| Oryza sativa (indica cultivar-group) clone 8S2F40 mRNA sequence Length = 269 Score = 46.1 bits (23), Expect = 0.15 Identities = 77/95 (81%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 |||||||||| |||||||| || |||||| ||||| ||||| ||| | ||||| ||| Sbjct: 96 gcaaacttgatgcccttctcaatcgaagacttgagctcacccttcaggttctccagaccc 37 Query: 421 tccttctccaaggccgatagctcgcccagcccaag 455 |||||||| || | || |||| |||||||||||| Sbjct: 36 tccttctcaaactcggaaagctggcccagcccaag 2
>gb|AF195869.1|AF195869 Vitis vinifera malate dehydrogenase (MDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1500 Score = 46.1 bits (23), Expect = 0.15 Identities = 122/155 (78%) Strand = Plus / Minus Query: 520 gttgattggacaaaagagcactctatgatgtcaggaactccattgagccccttcaagcat 579 |||||||| ||||||||||| || | | || ||||| ||||| || |||||||||| Sbjct: 970 gttgattgaacaaaagagcattcaactacatctggaacgccattaagaaccttcaagcaa 911 Query: 580 gcgtctccgaaaactgcaccagcatatgccatcgacaatgttgctgagccctttccagct 639 || ||| | || ||||| |||||||||||||| || | ||||| || || |||||||| Sbjct: 910 gcatctgcaaagactgctccagcatatgccattgagagggttgcagatccttttccagcc 851 Query: 640 tttgcttcaacaacttccgtcccaccatcctgtgt 674 || ||||| ||||| || || || ||||| ||||| Sbjct: 850 ttggcttccacaacctctgttcctccatcttgtgt 816
>gb|AY554166.1| Nicotiana tabacum putative mitochondrial malate dehydrogenase mRNA, partial cds; nuclear gene for mitochondrial product Length = 636 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttc 656 |||||||| |||||||| | |||||||| ||||||||||| || || || |||||||| Sbjct: 584 ccagcataagccatcgaaagggttgctgaaccctttccagccttggcctccacaacttc 526
>gb|AC092643.2| Homo sapiens BAC clone RP11-393P9 from 4, complete sequence Length = 151902 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 409 ctttccagcccctccttctcca 430 |||||||||||||||||||||| Sbjct: 30162 ctttccagcccctccttctcca 30183
>gb|AF068689.1|AF068689 Glycine max clone a2 malate dehydrogenase (Mdh-1) mRNA, nuclear gene encoding mitochondrial protein, partial cds Length = 245 Score = 44.1 bits (22), Expect = 0.59 Identities = 52/62 (83%) Strand = Plus / Minus Query: 481 agccttaccttggaggcaaagaatggcaactctgttacagttgattggacaaaagagcac 540 ||||| |||||||| |||||||| || | || || ||||| |||||||| ||||||||| Sbjct: 68 agcctcaccttggaagcaaagaagggaagttcagtaacagtggattggacgaaagagcac 9 Query: 541 tc 542 || Sbjct: 8 tc 7
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1159_D09 Length = 147770 Score = 44.1 bits (22), Expect = 0.59 Identities = 88/110 (80%) Strand = Plus / Minus Query: 361 gcaaacttgacacccttctcgatggaagacagcagctcgcccttgaggctttccagcccc 420 ||||| |||| ||||||||| || |||| | ||||||||||| || | ||||| || Sbjct: 118 gcaaatttgatacccttctcaattgaagccttgagctcgcccttaagattctccagtcct 59 Query: 421 tccttctccaaggccgatagctcgcccagcccaagcacttcctccactcc 470 |||||||| ||| | || |||| ||||| |||||| |||||||| ||||| Sbjct: 58 tccttctcaaagtctgacagctggcccaacccaagaacttcctcaactcc 9
>ref|NM_121003.2| Arabidopsis thaliana PMDH2; malate dehydrogenase AT5G09660 (PMDH2) transcript variant AT5G09660.1 mRNA, complete cds Length = 1389 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 941 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 882 Query: 659 tcccaccat 667 | ||||||| Sbjct: 881 ttccaccat 873
>ref|NM_001036783.1| Arabidopsis thaliana PMDH2 AT5G09660 (PMDH2) transcript variant AT5G09660.2 mRNA, complete cds Length = 1341 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 892 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 833 Query: 659 tcccaccat 667 | ||||||| Sbjct: 832 ttccaccat 824
>emb|AJ131206.1|ATH131206 Arabidopsis thaliana mRNA for microbody NAD-dependent malate dehydrogenase Length = 1245 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 847 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 788 Query: 659 tcccaccat 667 | ||||||| Sbjct: 787 ttccaccat 779
>gb|AC093803.3| Homo sapiens BAC clone RP11-319N12 from 4, complete sequence Length = 191903 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 aaaaattgcatgagttcaagt 316 ||||||||||||||||||||| Sbjct: 81534 aaaaattgcatgagttcaagt 81554
>gb|AY077653.1| Arabidopsis thaliana AT5g09660/F17I14_150 mRNA, complete cds Length = 1065 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 817 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 758 Query: 659 tcccaccat 667 | ||||||| Sbjct: 757 ttccaccat 749
>gb|AC025821.7| Homo sapiens BAC clone RP11-472F4 from 4, complete sequence Length = 178378 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 aaaaattgcatgagttcaagt 316 ||||||||||||||||||||| Sbjct: 152821 aaaaattgcatgagttcaagt 152841
>gb|AY057682.1| Arabidopsis thaliana AT5g09660/F17I14_150 mRNA, complete cds Length = 1232 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 829 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 770 Query: 659 tcccaccat 667 | ||||||| Sbjct: 769 ttccaccat 761
>gb|AF428373.1|AF428373 Arabidopsis thaliana AT5g09660/F17I14_150 mRNA, complete cds Length = 1246 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 843 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 784 Query: 659 tcccaccat 667 | ||||||| Sbjct: 783 ttccaccat 775
>gb|AF020271.1|AF020271 Medicago sativa mitochondrial malate dehydrogenase precursor (mmdh) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1467 Score = 42.1 bits (21), Expect = 2.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagc 638 |||||||| ||||| ||||| ||||| || ||||||||||| Sbjct: 863 ccagcataagccattgacaaagttgcggaaccctttccagc 823
>gb|AY037252.1| Arabidopsis thaliana AT5g09660/F17I14_150 mRNA, complete cds Length = 1262 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 868 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 809 Query: 659 tcccaccat 667 | ||||||| Sbjct: 808 ttccaccat 800
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 cagtagtacattttattgtgg 231 ||||||||||||||||||||| Sbjct: 2656359 cagtagtacattttattgtgg 2656339
>emb|BX831106.1|CNS0A0TK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS59ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1218 Score = 42.1 bits (21), Expect = 2.3 Identities = 57/69 (82%) Strand = Plus / Minus Query: 599 cagcatatgccatcgacaatgttgctgagccctttccagcttttgcttcaacaacttccg 658 ||||||||||||| || | |||||| || || |||||||||||| || |||||||| | Sbjct: 821 cagcatatgccattgaaagtgttgcagaaccagctccagcttttgcctccacaacttcag 762 Query: 659 tcccaccat 667 | ||||||| Sbjct: 761 ttccaccat 753
>gb|AC023795.18| Homo sapiens 12 BAC RP11-242B24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161838 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 403 ttgaggctttccagcccctccttct 427 ||||||||||||||||||| ||||| Sbjct: 125985 ttgaggctttccagcccctgcttct 126009
>dbj|AK173355.1| Ciona intestinalis cDNA, clone:cieg040a18, full insert sequence Length = 1695 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 630 ctttccagcttttgcttcaac 650 ||||||||||||||||||||| Sbjct: 1377 ctttccagcttttgcttcaac 1357
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 cagtagtacattttattgtgg 231 ||||||||||||||||||||| Sbjct: 1631058 cagtagtacattttattgtgg 1631078
>gb|AE014292.2| Brucella suis 1330 chromosome II, complete sequence Length = 1207381 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cctttccagcttttgcttca 648 |||||||||||||||||||| Sbjct: 1117827 cctttccagcttttgcttca 1117846
>ref|XM_953561.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial mRNA Length = 1017 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 cctccttctccaaggccgat 438 |||||||||||||||||||| Sbjct: 255 cctccttctccaaggccgat 274
>gb|AY046315.3| Bradyrhizobium japonicum inner membrane ABC transporter (ndvA) gene, partial cds; Pbp, phosphoribosyl-ATP pyrophosphohydrolase (his2), DedA (dedA), aspartate ammonium lyase (aspA), and fatty acid CoA-ligase (coaL) genes, complete cds; and unknown genes Length = 10628 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cacataggcaccggtgtccg 164 |||||||||||||||||||| Sbjct: 6278 cacataggcaccggtgtccg 6259
>ref|XM_330808.1| Neurospora crassa OR74A hypothetical protein (NCU09887.1) partial mRNA Length = 1017 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 cctccttctccaaggccgat 438 |||||||||||||||||||| Sbjct: 255 cctccttctccaaggccgat 274
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cagcagctcgcccttgaggc 409 |||||||||||||||||||| Sbjct: 1685978 cagcagctcgcccttgaggc 1685997
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 390 cagcagctcgcccttgaggc 409 |||||||||||||||||||| Sbjct: 1515698 cagcagctcgcccttgaggc 1515717
>gb|AC140206.2| Mus musculus BAC clone RP24-446O8 from chromosome 16, complete sequence Length = 195790 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 ctttccagcttttgcttcaa 649 |||||||||||||||||||| Sbjct: 125746 ctttccagcttttgcttcaa 125765
>ref|XM_383918.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03742.1) partial mRNA Length = 2415 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cttgacacccttctcgatgg 385 |||||||||||||||||||| Sbjct: 372 cttgacacccttctcgatgg 353
>gb|AC129320.5| Mus musculus BAC clone RP24-133J7 from chromosome 16, complete sequence Length = 183323 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 630 ctttccagcttttgcttcaa 649 |||||||||||||||||||| Sbjct: 35665 ctttccagcttttgcttcaa 35684
>gb|AC164551.2| Mus musculus BAC clone RP23-365G9 from chromosome 16, complete sequence Length = 215805 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 630 ctttccagcttttgcttcaa 649 |||||||||||||||||||| Sbjct: 202959 ctttccagcttttgcttcaa 202940
>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the 3' end of the OPRL1 gene for opiate receptor-like 1 protein, the GPR8 gene encoding a G protein-coupled receptor, the KIAA0835 gene encoding a protein similar to the myelin transcription factor 1 (MYT1), a novel gene, 7 CpG islands, ESTs, STSs and GSSs, complete sequence Length = 179888 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 416 gcccctccttctccaaggccgata 439 |||||||||||| ||||||||||| Sbjct: 152628 gcccctccttcttcaaggccgata 152651
>emb|BX663515.13| Zebrafish DNA sequence from clone DKEY-228G21 in linkage group 23, complete sequence Length = 224215 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 ccagtagtacattttattgt 229 |||||||||||||||||||| Sbjct: 121923 ccagtagtacattttattgt 121904
>gb|AC000353.27| Homo sapiens Chromosome 11q13 BAC Clone 18h3, complete sequence Length = 233089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ccagcccaagcacttcctcc 465 |||||||||||||||||||| Sbjct: 96391 ccagcccaagcacttcctcc 96372
>gb|AE009656.1| Brucella melitensis 16M chromosome II, section 18 of 107 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 cctttccagcttttgcttca 648 |||||||||||||||||||| Sbjct: 1069 cctttccagcttttgcttca 1050
>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence Length = 198961 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 acatcaaagccagtagtacatttt 224 ||||||||||||||| |||||||| Sbjct: 24909 acatcaaagccagtattacatttt 24932
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 637 gcttttgcttcaacaacttc 656 |||||||||||||||||||| Sbjct: 321396 gcttttgcttcaacaacttc 321377
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 cacataggcaccggtgtccg 164 |||||||||||||||||||| Sbjct: 1440699 cacataggcaccggtgtccg 1440680
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cctttccagcttttgcttca 648 |||||||||||||||||||| Sbjct: 1072939 cctttccagcttttgcttca 1072958
>emb|AL049838.3|CNS0000C Human chromosome 14 DNA sequence BAC R-999E24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 211723 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 ttggaggcaaagaatggcaactct 513 ||||||||||| |||||||||||| Sbjct: 211189 ttggaggcaaaaaatggcaactct 211212
>dbj|AP000944.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-867O8, complete sequence Length = 219246 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ccagcccaagcacttcctcc 465 |||||||||||||||||||| Sbjct: 49310 ccagcccaagcacttcctcc 49291
>emb|CT033637.1| Platynereis dumerilii EST IB0AAA17AB02FM1 Length = 739 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 601 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 644
>emb|CT033389.1| Platynereis dumerilii EST IB0AAA21BD09EM1 Length = 755 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 135 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 92
>emb|CT033099.1| Platynereis dumerilii EST IB0AAA26DD05EM1 Length = 869 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 822 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 779
>emb|CT033098.1| Platynereis dumerilii EST IB0AAA26DD05FM1 Length = 797 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 600 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 643
>emb|CT032993.1| Platynereis dumerilii EST IB0AAA28BD03EM1 Length = 922 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 831 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 788
>emb|CT032992.1| Platynereis dumerilii EST IB0AAA28BD03FM1 Length = 855 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 602 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 645
>emb|CT032417.1| Platynereis dumerilii EST IB0AAA38CF11EM1 Length = 922 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 826 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 783
>emb|CT032416.1| Platynereis dumerilii EST IB0AAA38CF11FM1 Length = 855 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 600 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 643
>emb|CT032293.1| Platynereis dumerilii EST IB0AAA41BF08EM1 Length = 918 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 499 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 456
>emb|CT032292.1| Platynereis dumerilii EST IB0AAA41BF08FM1 Length = 840 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 598 ccagcatatgccatcgacaatgttgctgagccctttccagcttt 641 |||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 600 ccagcataagccatcgacaaagtggctgaaccggttccagcttt 643
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cctttccagcttttgcttca 648 |||||||||||||||||||| Sbjct: 1067695 cctttccagcttttgcttca 1067714
>emb|AL121579.4|CNS01DRX Human chromosome 14 DNA sequence BAC R-349A22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161771 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 ttggaggcaaagaatggcaactct 513 ||||||||||| |||||||||||| Sbjct: 16281 ttggaggcaaaaaatggcaactct 16304 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,861,211 Number of Sequences: 3902068 Number of extensions: 4861211 Number of successful extensions: 88088 Number of sequences better than 10.0: 95 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87692 Number of HSP's gapped (non-prelim): 385 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
