ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd1l13 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U37703.1|HVU37703 Hordeum vulgare ORF 62 mRNA, chloroplast gene, encoding chloroplast protein, complete cds Length = 697 Score = 1134 bits (572), Expect = 0.0 Identities = 617/637 (96%), Gaps = 1/637 (0%) Strand = Plus / Minus Query: 1 ctagcaattcggnaacgcaaattgcgttttaatacgtctcactattcgaattttttaaat 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 ctagcaattcgg-aacgcaaattgcgttttaatacgtctcactattcgaattttttaaat 588 Query: 61 ggcctttattatttcttttttatggggttactaaatattaaccaaatttaatttaagaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 ggcctttattatttcttttttatggggttactaaatattaaccaaatttaatttaagaaa 528 Query: 121 tgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 tgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaa 468 Query: 181 atacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 atacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaa 408 Query: 241 ttactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtca 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 ttactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtca 348 Query: 301 tatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccctcactt 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 tatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccctcactt 288 Query: 361 aaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgattc 420 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 aaccaaaattgtaaaaaaatacaagaagtaggaggggtttaatcatgaatccattgattc 228 Query: 421 ttctctttaattaaaatttattacttaacctcttttttatttggatatgggggtgagagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 ttctctttaattaaaatttattacttaacctcttttttatttggatatgggggtgagagg 168 Query: 481 aggttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgtatacagt 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 aggttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgtatacagt 108 Query: 541 atacagagatatatcgaaaaggaacttgtatctgatatctttctagaggttaataaatan 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 atacagagatatatcgaaaaggaacttgtatctgatatctttctagaggttaataaatat 48 Query: 601 nnnnnnnnnnnatatggctatgttctatttgtaggag 637 |||||||||||||||||||||||||| Sbjct: 47 ttttattttttatatggctatgttctatttgtaggag 11
>dbj|AB027572.1| Triticum aestivum chloroplast DNA, 21.1-kb fragment bearing RNA polymerase subunit (rpo) genes Length = 21245 Score = 1013 bits (511), Expect = 0.0 Identities = 581/604 (96%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 ctagcaattcggnaacgcaaattgcgttttaatacgtctcactattcgaatttttta--- 57 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 968 ctagcaattcgg-aacgcaaattgcgttttaatacgtctcactattctaattttttagaa 910 Query: 58 --aatggcctttattatttcttttttatggggttactaaatattaaccaaatttaattta 115 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 909 gaaatggcctttattatttcttttttatggggttaataaatattaaccaaatttaattta 850 Query: 116 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 790 Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 agaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 730 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 670 Query: 296 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 610 Query: 356 cacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccatt 415 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 609 cacttaaccaaaattgtaaaaaaatacaagaagtaggaggggtttaatcatgaatccatt 550 Query: 416 gattcttctctttaattaaaatttattactt-aacctcttttttatttggatatgggggt 474 ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 549 gattcttctctttaattcaaatttattacttaaaccgcttttttatttggatatgggggt 490 Query: 475 gagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgta 534 |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gagaagagattatttactctttatttcacaagcgggtatagcggatcctgtatccgtgta 430 Query: 535 tacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctagaggttaat 594 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 429 tacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctagaggctaat 370 Query: 595 aaat 598 |||| Sbjct: 369 aaat 366 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtaggag 637 |||||||||||||||||||||||||| Sbjct: 352 atatggctatgttctatttgtaggag 327
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1013 bits (511), Expect = 0.0 Identities = 581/604 (96%), Gaps = 7/604 (1%) Strand = Plus / Minus Query: 1 ctagcaattcggnaacgcaaattgcgttttaatacgtctcactattcgaatttttta--- 57 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12322 ctagcaattcgg-aacgcaaattgcgttttaatacgtctcactattctaattttttagaa 12264 Query: 58 --aatggcctttattatttcttttttatggggttactaaatattaaccaaatttaattta 115 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12263 gaaatggcctttattatttcttttttatggggttaataaatattaaccaaatttaattta 12204 Query: 116 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12203 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 12144 Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12143 agaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 12084 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12083 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 12024 Query: 296 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12023 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 11964 Query: 356 cacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccatt 415 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 11963 cacttaaccaaaattgtaaaaaaatacaagaagtaggaggggtttaatcatgaatccatt 11904 Query: 416 gattcttctctttaattaaaatttattactt-aacctcttttttatttggatatgggggt 474 ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11903 gattcttctctttaattcaaatttattacttaaaccgcttttttatttggatatgggggt 11844 Query: 475 gagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgta 534 |||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11843 gagaagagattatttactctttatttcacaagcgggtatagcggatcctgtatccgtgta 11784 Query: 535 tacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctagaggttaat 594 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 11783 tacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctagaggctaat 11724 Query: 595 aaat 598 |||| Sbjct: 11723 aaat 11720 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtaggag 637 |||||||||||||||||||||||||| Sbjct: 11706 atatggctatgttctatttgtaggag 11681
>emb|X02560.1|CHTATRN1 Wheat chloroplast genes for tRNA-Gly (GCC), tRNA-Met (CAU) and tRNA-Gly (UCC) Length = 2358 Score = 854 bits (431), Expect = 0.0 Identities = 504/528 (95%), Gaps = 7/528 (1%) Strand = Plus / Minus Query: 1 ctagcaattcggnaacgcaaattgcgttttaatacgtctcactattcgaatttttta--- 57 |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 527 ctagcaattcgg-aacgcaaattgcgttttaatacgtctcactattctaattttttagaa 469 Query: 58 --aatggcctttattatttcttttttatggggttactaaatattaaccaaatttaattta 115 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 468 gaaatggcctttattatttcttttttatggggttaataaatattaaccaaatttaattta 409 Query: 116 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 agaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtacc 349 Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 agaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 289 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 229 Query: 296 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 agtcatatttctaatcctccaagctaccatcaaataaagttgactacatatttgatccct 169 Query: 356 cacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccatt 415 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 168 cacttaaccaaaattgtaaaaaaatacaagaagtaggaggggtttaatcatgaatccatt 109 Query: 416 gattcttctctttaattaaaatttattactt-aacctcttttttatttggatatgggggt 474 ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 108 gattcttctctttaattcaaatttattacttaaaccgcttttttatttggatatgggggt 49 Query: 475 gagaggaggttatttagtctttatttcacaagcgggtatagcggatcc 522 |||| ||| ||||||| ||||||||||||||| |||||||| |||||| Sbjct: 48 gagaagagattatttactctttatttcacaagggggtataggggatcc 1
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 12129 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 12070 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12069 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 12010 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12009 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11950 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11949 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 11890 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 11889 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 11830 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 11829 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 11774 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 11773 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 11718 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 11717 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 11658 Query: 586 gaggtta 592 ||||||| Sbjct: 11657 gaggtta 11651 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 11637 tatggctatgttctatttgtagga 11614
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 12129 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 12070 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12069 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 12010 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12009 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11950 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11949 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 11890 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 11889 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 11830 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 11829 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 11774 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 11773 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 11718 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 11717 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 11658 Query: 586 gaggtta 592 ||||||| Sbjct: 11657 gaggtta 11651 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 11637 tatggctatgttctatttgtagga 11614
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 12066 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 12007 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12006 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 11947 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 11946 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11887 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11886 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 11827 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 11826 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 11767 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 11766 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 11711 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 11710 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 11655 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 11654 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 11595 Query: 586 gaggtta 592 ||||||| Sbjct: 11594 gaggtta 11588 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 11574 tatggctatgttctatttgtagga 11551
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 12127 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 12068 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12067 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 12008 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 12007 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11948 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11947 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 11888 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 11887 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 11828 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 11827 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 11772 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 11771 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 11716 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 11715 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 11656 Query: 586 gaggtta 592 ||||||| Sbjct: 11655 gaggtta 11649 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 11635 tatggctatgttctatttgtagga 11612
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 14384190 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 14384249 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14384250 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 14384309 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14384310 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 14384369 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14384370 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 14384429 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 14384430 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 14384489 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 14384490 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 14384545 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 14384546 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 14384601 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 14384602 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 14384661 Query: 586 gaggtta 592 ||||||| Sbjct: 14384662 gaggtta 14384668 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 14384682 tatggctatgttctatttgtagga 14384705
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 33564144 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 33564085 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 33564084 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 33564025 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33564024 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 33563965 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 33563964 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 33563905 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 33563904 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 33563845 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 33563844 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 33563789 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 33563788 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 33563733 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 33563732 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 33563673 Query: 586 gaggtta 592 ||||||| Sbjct: 33563672 gaggtta 33563666 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Minus Query: 380 tacaagaagtaggaggggtttaatcatgaatccattg 416 ||||||||||||||||||||||||||||||||||||| Sbjct: 12843058 tacaagaagtaggaggggtttaatcatgaatccattg 12843022 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 33563652 tatggctatgttctatttgtagga 33563629
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 109341 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 109282 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109281 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 109222 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 109221 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 109162 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109161 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 109102 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 109101 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 109042 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 109041 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 108986 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 108985 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 108930 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 108929 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 108870 Query: 586 gaggtta 592 ||||||| Sbjct: 108869 gaggtta 108863 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 108849 tatggctatgttctatttgtagga 108826
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 106112 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 106171 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106172 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 106231 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106232 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 106291 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106292 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 106351 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 106352 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 106411 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 106412 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 106467 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 106468 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 106523 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 106524 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 106583 Query: 586 gaggtta 592 ||||||| Sbjct: 106584 gaggtta 106590 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 106604 tatggctatgttctatttgtagga 106627
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 577 bits (291), Expect = e-161 Identities = 438/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 12064 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 12005 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12004 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 11945 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 11944 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11885 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 11884 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 11825 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 11824 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 11765 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 11764 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 11709 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 11708 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 11653 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 11652 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 11593 Query: 586 gaggtta 592 ||||||| Sbjct: 11592 gaggtta 11586 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 11572 tatggctatgttctatttgtagga 11549
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 34185905 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 34185846 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34185845 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 34185786 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34185785 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 34185726 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 34185725 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 34185666 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 34185665 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaagaggggtttaatca 34185606 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 34185605 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 34185550 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 34185549 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 34185494 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| |||||||| || || |||||| Sbjct: 34185493 atacatggatacagtatacagaaatatatcgaaaagggacttgtattcgagatgtttcta 34185434 Query: 586 gaggtta 592 ||||||| Sbjct: 34185433 gaggtta 34185427 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 511 tatagcggatcctgtatccgtgtatacagtatacagagatatatcgaaaaggaacttgta 570 ||||||||||||||||| | || |||||||||| ||| |||||||||||||| | ||||| Sbjct: 35299812 tatagcggatcctgtatacatggatacagtatatagaaatatatcgaaaagggatttgta 35299753 Query: 571 tctgatatctttctagaggtta 592 | ||| || ||||||||||||| Sbjct: 35299752 tttgagatgtttctagaggtta 35299731 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 34185413 tatggctatgttctatttgtagga 34185390
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 10351 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 10292 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 10291 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaag 10232 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10231 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 10172 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10171 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 10112 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 10111 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 10052 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 10051 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 9996 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 9995 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 9940 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 9939 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 9880 Query: 586 gaggtta 592 ||||||| Sbjct: 9879 gaggtta 9873 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 9859 tatggctatgttctatttgtagga 9836
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 85284 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 85225 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 85224 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaag 85165 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 85164 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 85105 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 85104 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 85045 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 85044 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 84985 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 84984 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 84929 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 84928 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 84873 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 84872 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 84813 Query: 586 gaggtta 592 ||||||| Sbjct: 84812 gaggtta 84806 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 84792 tatggctatgttctatttgtagga 84769
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 10303959 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 10303900 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 10303899 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaag 10303840 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10303839 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 10303780 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10303779 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 10303720 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 10303719 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 10303660 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 10303659 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 10303604 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 10303603 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 10303548 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 10303547 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 10303488 Query: 586 gaggtta 592 ||||||| Sbjct: 10303487 gaggtta 10303481 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 10303467 tatggctatgttctatttgtagga 10303444
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 34276377 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 34276318 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34276317 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 34276258 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 34276257 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 34276198 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 34276197 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 34276138 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 34276137 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaagaggggtttaatca 34276078 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 34276077 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 34276022 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 34276021 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 34275966 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| |||||||| || || |||||| Sbjct: 34275965 atacatggatacagtatacagaaatatatcgaaaagggacttgtattcgagatgtttcta 34275906 Query: 586 gaggtta 592 ||||||| Sbjct: 34275905 gaggtta 34275899 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 511 tatagcggatcctgtatccgtgtatacagtatacagagatatatcgaaaaggaacttgta 570 ||||||||||||||||| | || |||||||||| ||| |||||||||||||| | ||||| Sbjct: 35389884 tatagcggatcctgtatacatggatacagtatatagaaatatatcgaaaagggatttgta 35389825 Query: 571 tctgatatctttctagaggtta 592 | ||| || ||||||||||||| Sbjct: 35389824 tttgagatgtttctagaggtta 35389803 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 34275885 tatggctatgttctatttgtagga 34275862
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 149717 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 149658 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 149657 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 149598 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 149597 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 149538 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 149537 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 149478 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 149477 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaagaggggtttaatca 149418 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 149417 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 149362 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 149361 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 149306 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| |||||||| || || |||||| Sbjct: 149305 atacatggatacagtatacagaaatatatcgaaaagggacttgtattcgagatgtttcta 149246 Query: 586 gaggtta 592 ||||||| Sbjct: 149245 gaggtta 149239 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 149225 tatggctatgttctatttgtagga 149202
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 569 bits (287), Expect = e-159 Identities = 437/487 (89%), Gaps = 13/487 (2%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 10309998 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 10309939 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | Sbjct: 10309938 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaag 10309879 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10309878 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 10309819 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt--- 347 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 10309818 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 10309759 Query: 348 --tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 10309758 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 10309699 Query: 406 tgaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttgga 465 ||||||||||||||||||||||||| || |||||||| | | ||||||||||||| Sbjct: 10309698 tgaatccattgattcttctctttaa----aacttattactcaccactttttttatttgga 10309643 Query: 466 tatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgt 525 ||||||| | |||| ||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 10309642 tatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgt 10309587 Query: 526 atccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttcta 585 || | || |||||||||||||| |||||||||||||| | |||||| ||| || |||||| Sbjct: 10309586 atacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttcta 10309527 Query: 586 gaggtta 592 ||||||| Sbjct: 10309526 gaggtta 10309520 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 10309506 tatggctatgttctatttgtagga 10309483
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 561 bits (283), Expect = e-156 Identities = 441/492 (89%), Gaps = 18/492 (3%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 95481 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 95422 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95421 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 95362 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95361 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 95302 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 95301 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 95242 Query: 346 tttgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 95241 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 95182 Query: 406 tgaatccattgattcttctctttaattaaaatttattactta----acctctt-ttttat 460 ||||||||||||||||||||| |||||| |||||||| | ||| ||| |||||| Sbjct: 95181 tgaatccattgattcttctct----ttaaaacttattactcaccacaccactttttttat 95126 Query: 461 ttggatatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggat 520 |||||||||||| | |||| ||| |||| ||||||||||||||||| |||||||||| Sbjct: 95125 ttggatatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggat 95070 Query: 521 cctgtatccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatct 580 ||||||| | || |||||||||||||| |||||||||||||| | |||||| ||| || | Sbjct: 95069 cctgtatacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgt 95010 Query: 581 ttctagaggtta 592 |||||||||||| Sbjct: 95009 ttctagaggtta 94998 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 94984 tatggctatgttctatttgtagga 94961
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 561 bits (283), Expect = e-156 Identities = 443/497 (89%), Gaps = 15/497 (3%) Strand = Plus / Minus Query: 69 ttatttcttttttatggggttactaaatattaaccaaatttaatttaagaaatgagagaa 128 |||||| |||| ||| ||||||||||||| ||| |||||| || ||||| |||||| Sbjct: 74295 ttatttattttgtatcgggttactaaatactaaacaaattcaa-----gaaataagagaa 74241 Query: 129 ttcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatacaaca 188 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 74240 ttcagaatagctaccagaaagactaatccaatccataatgatgtaccggaaaatacaacg 74181 Query: 189 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaag 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74180 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaaa 74121 Query: 249 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttcta 308 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 74120 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttata 74061 Query: 309 atcctccaagctaccatcaaataaagttgactaca------tatttgatccctcacttaa 362 ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 74060 atcctccaaactaccttcaaataaagttgactacatatttctatttgatccctcacttaa 74001 Query: 363 ccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgattctt 422 ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 74000 tcaaaattgtacgaaaatacaagaagtaggaggggtttaatcatgaatccgttgattctt 73941 Query: 423 ctctttaattaaaatttattacttaacctcttttttatttggatatgggggtgagaggag 482 || ||| ||||||| || || |||| | ||||||||||||||||| | |||| |||| Sbjct: 73940 ct-ttttattaaaactttttcctta---ccgtttttatttggatatggagttgaggggag 73885 Query: 483 gttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgtatacagtat 542 | |||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 73884 gggatttagcctttatttcacaaacggatatagcggattctgtatccgtgtatacagtat 73825 Query: 543 acagagatatatcgaaa 559 |||||||||||| |||| Sbjct: 73824 acagagatatattgaaa 73808 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtagga 636 |||| |||||||||||||||||||| Sbjct: 73770 atatagctatgttctatttgtagga 73746
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 561 bits (283), Expect = e-156 Identities = 441/492 (89%), Gaps = 18/492 (3%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 9241360 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 9241301 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9241300 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 9241241 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241240 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 9241181 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 9241180 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 9241121 Query: 346 tttgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 9241120 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 9241061 Query: 406 tgaatccattgattcttctctttaattaaaatttattactta----acctctt-ttttat 460 ||||||||||||||||||||| |||||| |||||||| | ||| ||| |||||| Sbjct: 9241060 tgaatccattgattcttctct----ttaaaacttattactcaccacaccactttttttat 9241005 Query: 461 ttggatatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggat 520 |||||||||||| | |||| ||| |||| ||||||||||||||||| |||||||||| Sbjct: 9241004 ttggatatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggat 9240949 Query: 521 cctgtatccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatct 580 ||||||| | || |||||||||||||| |||||||||||||| | |||||| ||| || | Sbjct: 9240948 cctgtatacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgt 9240889 Query: 581 ttctagaggtta 592 |||||||||||| Sbjct: 9240888 ttctagaggtta 9240877 Score = 561 bits (283), Expect = e-156 Identities = 441/492 (89%), Gaps = 18/492 (3%) Strand = Plus / Minus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||| Sbjct: 9137455 atttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgat 9137396 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9137395 gtaccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaagg 9137336 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9137335 ggtacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 9137276 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 9137275 gcaatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattata 9137216 Query: 346 tttgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatca 405 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct: 9137215 tttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatca 9137156 Query: 406 tgaatccattgattcttctctttaattaaaatttattactta----acctctt-ttttat 460 ||||||||||||||||||||| |||||| |||||||| | ||| ||| |||||| Sbjct: 9137155 tgaatccattgattcttctct----ttaaaacttattactcaccacaccactttttttat 9137100 Query: 461 ttggatatgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggat 520 |||||||||||| | |||| ||| |||| ||||||||||||||||| |||||||||| Sbjct: 9137099 ttggatatggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggat 9137044 Query: 521 cctgtatccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatct 580 ||||||| | || |||||||||||||| |||||||||||||| | |||||| ||| || | Sbjct: 9137043 cctgtatacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgt 9136984 Query: 581 ttctagaggtta 592 |||||||||||| Sbjct: 9136983 ttctagaggtta 9136972 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 9240863 tatggctatgttctatttgtagga 9240840 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 9136958 tatggctatgttctatttgtagga 9136935 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ttactaaatattaaccaaatt 108 ||||||||||||||||||||| Sbjct: 23914856 ttactaaatattaaccaaatt 23914876 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 530 gtgtatacagtatacagaga 549 |||||||||||||||||||| Sbjct: 2510736 gtgtatacagtatacagaga 2510755
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 561 bits (283), Expect = e-156 Identities = 443/497 (89%), Gaps = 15/497 (3%) Strand = Plus / Minus Query: 69 ttatttcttttttatggggttactaaatattaaccaaatttaatttaagaaatgagagaa 128 |||||| |||| ||| ||||||||||||| ||| |||||| || ||||| |||||| Sbjct: 12668 ttatttattttgtatcgggttactaaatactaaacaaattcaa-----gaaataagagaa 12614 Query: 129 ttcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatacaaca 188 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12613 ttcagaatagctaccagaaagactaatccaatccataatgatgtaccggaaaatacaacg 12554 Query: 189 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaag 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12553 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaaa 12494 Query: 249 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttcta 308 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 12493 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttata 12434 Query: 309 atcctccaagctaccatcaaataaagttgactaca------tatttgatccctcacttaa 362 ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 12433 atcctccaaactaccttcaaataaagttgactacatatttctatttgatccctcacttaa 12374 Query: 363 ccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgattctt 422 ||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12373 tcaaaattgtacgaaaatacaagaagtaggaggggtttaatcatgaatccgttgattctt 12314 Query: 423 ctctttaattaaaatttattacttaacctcttttttatttggatatgggggtgagaggag 482 || ||| ||||||| || || |||| | ||||||||||||||||| | |||| |||| Sbjct: 12313 ct-ttttattaaaactttttcctta---ccgtttttatttggatatggagttgaggggag 12258 Query: 483 gttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgtatacagtat 542 | |||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||||| Sbjct: 12257 gggatttagcctttatttcacaaacggatatagcggattctgtatccgtgtatacagtat 12198 Query: 543 acagagatatatcgaaa 559 |||||||||||| |||| Sbjct: 12197 acagagatatattgaaa 12181 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtagga 636 |||| |||||||||||||||||||| Sbjct: 12143 atatagctatgttctatttgtagga 12119
>emb|X05295.1|CHZPTRNS Zea perennis cpDNA EcoRI-PstI fragment containing length mutation LM-3 from large unique sequence region Length = 831 Score = 504 bits (254), Expect = e-139 Identities = 398/441 (90%), Gaps = 13/441 (2%) Strand = Plus / Minus Query: 126 gaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaataca 185 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 831 gaattcagaatagctaccagaaagactaatccaatccataatgatgtaccggaaaataca 772 Query: 186 acatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattact 245 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 acgtttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattact 712 Query: 246 aagactgaggaag-tcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatt 304 || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 711 aaaactgaggaagttcgcaattaatgcaaaaacagctaattggaaagcaatattcatatt 652 Query: 305 tctaatcctccaagctaccatcaaataaagttgactaca------tatttgatccctcac 358 | ||||||||||| ||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 651 tataatcctccaaactaccttcaaataaagttgactacatatttctatttgatccctcac 592 Query: 359 ttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgat 418 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 591 ttaatcaaaattgtatgaaaatacaagaagtaggaggggtttaatcatgaatccattgat 532 Query: 419 tcttctctttaattaaaatttattacttaacctcttttttatttggatatgggggtgaga 478 |||||| ||| ||||||| || || ||| ||| | |||||||| ||||||| | |||| Sbjct: 531 tcttct-ttttattaaaactttttcctt-accgc--ttttatttagatatggagttgagg 476 Query: 479 ggaggttatttagtctttatttcacaagcgggtatagcggatcctgtatccgtgtataca 538 ||||| |||||| ||||||||||||| ||| |||||||||| ||||||||||||||||| Sbjct: 475 ggaggggatttag-ctttatttcacaa-cggatatagcggattctgtatccgtgtataca 418 Query: 539 gtatacagagatatatcgaaa 559 |||||||||||||||| |||| Sbjct: 417 gtatacagagatatattgaaa 397 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtagga 636 |||| |||||||||||||||||||| Sbjct: 359 atatagctatgttctatttgtagga 335
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 472 bits (238), Expect = e-130 Identities = 379/426 (88%), Gaps = 13/426 (3%) Strand = Plus / Minus Query: 172 taccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggg 231 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 143097 taccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaggg 143038 Query: 232 gtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaag 291 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 143037 gtacactaatgacttagactgaggaagtcacaattaatgcaaaaacagctaattggaaag 142978 Query: 292 caatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt---- 347 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142977 caatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattatat 142918 Query: 348 -tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcat 406 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 142917 ttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatcat 142858 Query: 407 gaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttggat 466 |||||||||||||||||||||||| || |||||||| | | |||||||||||||| Sbjct: 142857 gaatccattgattcttctctttaa----aacttattactcaccactttttttatttggat 142802 Query: 467 atgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgta 526 |||||| | |||| ||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 142801 atggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgta 142746 Query: 527 tccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctag 586 | | || |||||||||||||| |||||||||||||| | |||||| ||| || ||||||| Sbjct: 142745 tacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttctag 142686 Query: 587 aggtta 592 |||||| Sbjct: 142685 aggtta 142680 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 142666 tatggctatgttctatttgtagga 142643
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 472 bits (238), Expect = e-130 Identities = 379/426 (88%), Gaps = 13/426 (3%) Strand = Plus / Minus Query: 172 taccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggg 231 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6184 taccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaggg 6125 Query: 232 gtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaag 291 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6124 gtacactaatgacttagactgaggaagtcacaattaatgcaaaaacagctaattggaaag 6065 Query: 292 caatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt---- 347 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 6064 caatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattatat 6005 Query: 348 -tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcat 406 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 6004 ttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatcat 5945 Query: 407 gaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttggat 466 |||||||||||||||||||||||| || |||||||| | | |||||||||||||| Sbjct: 5944 gaatccattgattcttctctttaa----aacttattactcaccactttttttatttggat 5889 Query: 467 atgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgta 526 |||||| | |||| ||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 5888 atggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgta 5833 Query: 527 tccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctag 586 | | || |||||||||||||| |||||||||||||| | |||||| ||| || ||||||| Sbjct: 5832 tacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttctag 5773 Query: 587 aggtta 592 |||||| Sbjct: 5772 aggtta 5767 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 5753 tatggctatgttctatttgtagga 5730
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 472 bits (238), Expect = e-130 Identities = 379/426 (88%), Gaps = 13/426 (3%) Strand = Plus / Minus Query: 172 taccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggg 231 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12845638 taccggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaggg 12845579 Query: 232 gtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaag 291 |||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 12845578 gtacactaatgacttagactgaggaagtcacaattaatgcaaaaacagctaattggaaag 12845519 Query: 292 caatagtcatatttctaatcctccaagctaccatcaaataaagttgactacatatt---- 347 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12845518 caatagtcatatttctaatcctccaagttaccatcaaataaagttgactacatattatat 12845459 Query: 348 -tgatccctcacttaaccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcat 406 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 12845458 ttgatccctcacttaatcaaaattgtaataaaatacaagaagtaggaggggtttaatcat 12845399 Query: 407 gaatccattgattcttctctttaattaaaatttattacttaacctcttttttatttggat 466 |||||||||||||||||||||||| || |||||||| | | |||||||||||||| Sbjct: 12845398 gaatccattgattcttctctttaa----aacttattactcaccactttttttatttggat 12845343 Query: 467 atgggggtgagaggaggttatttagtctttatttcacaagcgggtatagcggatcctgta 526 |||||| | |||| ||| |||| ||||||||||||||||| |||||||||||||||| Sbjct: 12845342 atggggtt--gagggggt--tttatgctttatttcacaagcggatatagcggatcctgta 12845287 Query: 527 tccgtgtatacagtatacagagatatatcgaaaaggaacttgtatctgatatctttctag 586 | | || |||||||||||||| |||||||||||||| | |||||| ||| || ||||||| Sbjct: 12845286 tacatggatacagtatacagaaatatatcgaaaagggatttgtatttgagatgtttctag 12845227 Query: 587 aggtta 592 |||||| Sbjct: 12845226 aggtta 12845221 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 12845207 tatggctatgttctatttgtagga 12845184
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 466 bits (235), Expect = e-128 Identities = 332/367 (90%), Gaps = 11/367 (2%) Strand = Plus / Minus Query: 69 ttatttcttttttatggggttactaaatattaaccaaatttaatttaagaaatgagagaa 128 |||||| |||| ||| ||||||||||||| ||| |||||| || ||||| |||||| Sbjct: 12238 ttatttattttgtatcgggttactaaatactaaacaaattcaa-----gaaataagagaa 12184 Query: 129 ttcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatacaaca 188 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12183 ttcagaatagctaccagaaagactaatccaatccataatgatgtaccggaaaatacaacg 12124 Query: 189 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaag 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12123 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaaa 12064 Query: 249 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttcta 308 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 12063 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatattcatatttata 12004 Query: 309 atcctccaagctaccatcaaataaagttgactaca------tatttgatccctcacttaa 362 ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 12003 atcctccaaactaccttcaaataaagttgactacatatttctatttgatccctcacttaa 11944 Query: 363 ccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgattctt 422 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11943 tcaaaattgtatgaaaatacaagaagtaggaggggtttaatcatgaatccattgattctt 11884 Query: 423 ctcttta 429 || |||| Sbjct: 11883 cttttta 11877 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtagga 636 |||| |||||||||||||||||||| Sbjct: 11796 atatagctatgttctatttgtagga 11772
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 442 bits (223), Expect = e-121 Identities = 329/367 (89%), Gaps = 11/367 (2%) Strand = Plus / Minus Query: 69 ttatttcttttttatggggttactaaatattaaccaaatttaatttaagaaatgagagaa 128 |||||| |||| ||| ||||||||||||| ||| |||||| || ||||| |||||| Sbjct: 12244 ttatttattttgtatcgggttactaaatactaaacaaattcaa-----gaaataagagaa 12190 Query: 129 ttcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatacaaca 188 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 12189 ttcagaatagctaccagaaagactaatccaatccataatgatgtaccggaaaatacaacg 12130 Query: 189 tttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattactaag 248 |||||||||||||||||||||||||||||||||||||||||| || | ||||||||||| Sbjct: 12129 tttttattatttgaccaaccatcaggagaagcaaatacaaggtgtcctctaattactaaa 12070 Query: 249 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatttcta 308 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 12069 actgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatattcatatttata 12010 Query: 309 atcctccaagctaccatcaaataaagttgactaca------tatttgatccctcacttaa 362 ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct: 12009 atcctccaaactaccttcaaataaagttgactacatatttctatttgatccctcacttaa 11950 Query: 363 ccaaaattgtnnnnnnntacaagaagtaggaggggtttaatcatgaatccattgattctt 422 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11949 tcaaaattgtatgaaaatacaagaagtaggaggggtttaatcatgaatccattgattctt 11890 Query: 423 ctcttta 429 || |||| Sbjct: 11889 cttttta 11883 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 612 atatggctatgttctatttgtagga 636 |||| |||||||||||||||||||| Sbjct: 11802 atatagctatgttctatttgtagga 11778
>emb|AJ011807.1|HVU011807 Hordeum vulgare chloroplast tRNA-fMet and tRNA-Gly (UCC and GCC) genes Length = 2975 Score = 385 bits (194), Expect = e-103 Identities = 204/206 (99%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 1 ctagcaattcggnaacgcaaattgcgttttaatacgtctcactattcgaattttttaaat 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2771 ctagcaattcgg-aacgcaaattgcgttttaatacgtctcactattcgaattttttaaat 2829 Query: 61 ggcctttattatttcttttttatggggttactaaatattaaccaaatttaatttaagaaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2830 ggcctttattatttcttttttatggggttactaaatattaaccaaatttaatttaagaaa 2889 Query: 121 tgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2890 tgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaa 2949 Query: 181 atacaacatttttattatttgaccaa 206 || ||||||||||||||||||||||| Sbjct: 2950 atgcaacatttttattatttgaccaa 2975
>ref|XM_465410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 359 bits (181), Expect = 7e-96 Identities = 205/213 (96%) Strand = Plus / Plus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1 atgagagaatttagaatagctaccagaaagaccagtccaatccataatgatgtaccggaa 60 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaggggtacacta 120 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 121 atgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaagcaatagtc 180 Query: 300 atatttctaatcctccaagctaccatcaaataa 332 ||||||||||||||||||| ||||||||||||| Sbjct: 181 atatttctaatcctccaagttaccatcaaataa 213
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 355 bits (179), Expect = 1e-94 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 19333485 atttaagaaatgagagaatttagaatagctaccagaaagaccagtcctatccataatgat 19333544 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||| || |||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 19333545 gtatcgaaaaatacaacgtttttattgtttgaacaaccatcaagagaagcaaatacaagg 19333604 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19333605 ggtacactaaggactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 19333664 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 19333665 gcaatagtcatatttctaatccttcaagttaccatcaaataaagttaactacgtattata 19333724 Query: 346 tttgatccctcacttaaccaaaattgt 372 ||||||||||||||||| ||||||||| Sbjct: 19333725 tttgatccctcacttaatcaaaattgt 19333751 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 13455769 tatggctatgttctatttgtagga 13455792 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttactaaatattaaccaaat 107 |||||||||||||||||||| Sbjct: 26570878 ttactaaatattaaccaaat 26570859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 355 bits (179), Expect = 1e-94 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 19259712 atttaagaaatgagagaatttagaatagctaccagaaagaccagtcctatccataatgat 19259771 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||| || |||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 19259772 gtatcgaaaaatacaacgtttttattgtttgaacaaccatcaagagaagcaaatacaagg 19259831 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19259832 ggtacactaaggactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 19259891 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 19259892 gcaatagtcatatttctaatccttcaagttaccatcaaataaagttaactacgtattata 19259951 Query: 346 tttgatccctcacttaaccaaaattgt 372 ||||||||||||||||| ||||||||| Sbjct: 19259952 tttgatccctcacttaatcaaaattgt 19259978 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 613 tatggctatgttctatttgtagga 636 |||||||||||||||||||||||| Sbjct: 13410043 tatggctatgttctatttgtagga 13410066 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ttactaaatattaaccaaat 107 |||||||||||||||||||| Sbjct: 26499047 ttactaaatattaaccaaat 26499028
>emb|BX119952.3|CNS09S4V Oryza sativa chromosome 12, . BAC OSJNBb0022A20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131975 Score = 355 bits (179), Expect = 1e-94 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 39096 atttaagaaatgagagaatttagaatagctaccagaaagaccagtcctatccataatgat 39155 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||| || |||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 39156 gtatcgaaaaatacaacgtttttattgtttgaacaaccatcaagagaagcaaatacaagg 39215 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 39216 ggtacactaaggactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 39275 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 39276 gcaatagtcatatttctaatccttcaagttaccatcaaataaagttaactacgtattata 39335 Query: 346 tttgatccctcacttaaccaaaattgt 372 ||||||||||||||||| ||||||||| Sbjct: 39336 tttgatccctcacttaatcaaaattgt 39362
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 355 bits (179), Expect = 1e-94 Identities = 245/267 (91%), Gaps = 5/267 (1%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||| Sbjct: 11179 atttaagaaatgagagaatttagaatagctaccagaaagaccagtcctatccataatgat 11238 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 ||| || |||||||||| |||||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 11239 gtatcgaaaaatacaacgtttttattgtttgaacaaccatcaagagaagcaaatacaagg 11298 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 11299 ggtacactaaggactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaa 11358 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaataaagttgactac-----ata 345 ||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||| Sbjct: 11359 gcaatagtcatatttctaatccttcaagttaccatcaaataaagttaactacgtattata 11418 Query: 346 tttgatccctcacttaaccaaaattgt 372 ||||||||||||||||| ||||||||| Sbjct: 11419 tttgatccctcacttaatcaaaattgt 11445
>ref|NM_195973.1| Oryza sativa (japonica cultivar-group) hypothetical protein ORF62 from chromosome 10 chloroplast insertion (OSJNBb0075K12.23), mRNA Length = 189 Score = 311 bits (157), Expect = 2e-81 Identities = 181/189 (95%) Strand = Plus / Minus Query: 113 ttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgt 172 |||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 189 ttaagaaatgagagaatttagaatagctaccagaaagaccagtccaatccataatgatgt 130 Query: 173 accggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagggg 232 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| Sbjct: 129 accggaaaatacaacgtttttattgtttgaccaaccatcaggagaagcaaatacaaaggg 70 Query: 233 tacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagc 292 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 69 tacactaatgactaagactgaggaagtcacaattaatgcaaaaacagctaattggaaagc 10 Query: 293 aatagtcat 301 ||||||||| Sbjct: 9 aatagtcat 1
>gb|AY727480.1| Trillium texanum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1019 Score = 291 bits (147), Expect = 1e-75 Identities = 201/219 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 527 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 468 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||| Sbjct: 467 cggaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacaggta 408 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 407 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 348 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||| ||||||||||||||||| |||||||| Sbjct: 347 tagtcatgtttataatcctccaagctaccgacaaataaa 309
>gb|AY727478.1| Pseudotrillium rivale PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 985 Score = 291 bits (147), Expect = 1e-75 Identities = 201/219 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 520 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 461 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||| Sbjct: 460 cggaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacaggta 401 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 400 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 341 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||| ||||||||||||||||| |||||||| Sbjct: 340 tagtcatgtttataatcctccaagctaccgacaaataaa 302
>gb|AY727479.1| Trillium ovatum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1013 Score = 283 bits (143), Expect = 3e-73 Identities = 200/219 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 aagagatgagagaattaaggatagctactagaaagaccaatccaatccataatgatgtac 448 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||| Sbjct: 447 cggaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacaggta 388 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 328 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||| ||||||||||||||||| |||||||| Sbjct: 327 tagtcatgtttataatcctccaagctaccgacaaataaa 289
>gb|AY642469.1| Phragmipedium lindenii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 495 atgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaa 436 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 435 aatacaacattttttttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 376 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 375 atcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtc 316 Query: 300 atatttctaatcctccaagctaccatcaaat 330 || ||| ||||||||||| |||||| ||||| Sbjct: 315 atgtttgtaatcctccaaactaccaacaaat 285
>gb|AY642468.1| Phragmipedium sargentianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1009 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 495 atgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaa 436 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 435 aatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 376 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 375 atcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtc 316 Query: 300 atatttctaatcctccaagctaccatcaaat 330 || ||| ||||||||||| |||||| ||||| Sbjct: 315 atgtttgtaatcctccaaactaccaacaaat 285
>gb|AY642467.1| Phragmipedium boissierianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 495 atgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaa 436 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 435 aatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 376 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 375 atcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtc 316 Query: 300 atatttctaatcctccaagctaccatcaaat 330 || ||| ||||||||||| |||||| ||||| Sbjct: 315 atgtttgtaatcctccaaactaccaacaaat 285
>gb|AY642466.1| Phragmipedium longifolium tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 495 atgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaa 436 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 435 aatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 376 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 375 atcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtc 316 Query: 300 atatttctaatcctccaagctaccatcaaat 330 || ||| ||||||||||| |||||| ||||| Sbjct: 315 atgtttgtaatcctccaaactaccaacaaat 285
>gb|AY642465.1| Phragmipedium caudatum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1003 Score = 276 bits (139), Expect = 8e-71 Identities = 193/211 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||| ||| Sbjct: 495 atgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaa 436 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 435 aatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 376 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 375 atcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtc 316 Query: 300 atatttctaatcctccaagctaccatcaaat 330 || ||| ||||||||||| |||||| ||||| Sbjct: 315 atgtttgtaatcctccaaactaccaacaaat 285
>emb|AM085641.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP30 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085640.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP28 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085639.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP27 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085638.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP26 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085637.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP25 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085636.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP24 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085635.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP19 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085634.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP14 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085633.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP11 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085632.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP10 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085631.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP7 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>emb|AM085630.1| Ranunculus pygmaeus chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate RP3 Length = 1153 Score = 276 bits (139), Expect = 8e-71 Identities = 199/219 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 554 aagagatgagagaattaaggatagctactagaaagactaatccaatccataatgatgtac 495 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| |||| |||||||||||||| ||||| Sbjct: 494 cggaaaatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggta 435 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 434 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 375 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 ||||||| ||||||||||||||||||||| |||||||| Sbjct: 374 tagtcatgcttctaatcctccaagctaccaacaaataaa 336
>gb|AY642483.1| Cypripedium acaule tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 930 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 499 aagagatgagagaattaaggatagctaccagaaagactaatccaatccataatgatgtac 440 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 439 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 380 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 379 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 320 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| |||||| ||||| Sbjct: 319 tagtcatgtttgtaatcctccaaactaccaacaaat 284
>gb|AY642482.1| Paphiopedilum niveum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 958 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642481.1| Paphiopedilum micranthum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 1008 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 509 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 450 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||| |||||||| |||||||||||||| ||||| Sbjct: 449 cagaaaatacaacatttttgttacttgacccaccatcagaagaagcaaatacaacgggta 390 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 389 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 330 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| |||||| ||||| Sbjct: 329 tagtcatgtttgtaatcctccaaactaccaacaaat 294
>gb|AY642479.1| Paphiopedilum supardii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 986 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 510 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 451 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 450 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 391 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 390 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 331 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 330 tagtcatgtttgtaatcctccaaactatcaacaaat 295
>gb|AY642478.1| Paphiopedilum concolor tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 870 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 418 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 359 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 358 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 299 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 298 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 239 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 238 tagtcatgtttgtaatcctccaaactatcaacaaat 203
>gb|AY642477.1| Paphiopedilum hybrid cultivar tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 980 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642476.1| Paphiopedilum philippinense tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 980 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642475.1| Paphiopedilum lowii var. richardianum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 978 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642474.1| Paphiopedilum tonsum var. braemii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642473.1| Paphiopedilum insigne var. sanderae tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642472.1| Paphiopedilum adductum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 984 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642471.1| Paphiopedilum insigne tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY642470.1| Paphiopedilum glaucophyllum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 987 Score = 270 bits (136), Expect = 5e-69 Identities = 196/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|DQ069353.1| Typha latifolia photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 270 bits (136), Expect = 5e-69 Identities = 166/176 (94%) Strand = Plus / Minus Query: 126 gaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaataca 185 ||||| ||||||||||| |||||||||| |||||||||||| |||||||||||||||||| Sbjct: 176 gaattaagaatagctaccagaaagactaatccaatccataaagatgtaccggaaaataca 117 Query: 186 acatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattact 245 |||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| | | Sbjct: 116 acatttttgttacttgaccaaccatcaggagaagcaaatacaacgggtacactaatcagt 57 Query: 246 aagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcat 301 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56 aagactgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcat 1
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 268 bits (135), Expect = 2e-68 Identities = 195/215 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| |||| |||||||||| |||||||||||||||||||| Sbjct: 39424 aagagatgagagaattaagtatacctaccagaaagactaatccaatccataatgatgtac 39365 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||| |||| |||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 39364 cggaaaaaacaatatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 39305 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 39304 cactaatcagtaagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 39245 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| ||||||||||||||||||||| |||| Sbjct: 39244 tagtcatgcttctaatcctccaagctaccaacaaa 39210
>gb|DQ069354.1| Yucca schidigera photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 266 bits (134), Expect = 8e-68 Identities = 170/182 (93%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 182 atgagagaattaaggatagctaccagaaagactaatccaatccataatgatgtaccggaa 123 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||| Sbjct: 122 aatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacacta 63 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 atcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 3 Query: 300 at 301 || Sbjct: 2 at 1
>gb|AY642480.1| Paphiopedilum lowii tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 974 Score = 262 bits (132), Expect = 1e-66 Identities = 195/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| Sbjct: 504 aagagatgagagaattcaggatagctaccagaaagactaatccaatccataatgatgtac 445 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 444 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 385 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | ||||| |||||||||||||||||||||||||||||||||| Sbjct: 384 cactaatcagtaagattagtgaagttgcaattaatgcaaaaacagctaattggaaagcaa 325 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| ||| ||||||||||| ||| || ||||| Sbjct: 324 tagtcatgtttgtaatcctccaaactatcaacaaat 289
>gb|AY727485.1| Liriodendron tulipifera PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1044 Score = 262 bits (132), Expect = 1e-66 Identities = 195/216 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 510 aagagatgagagaattaaggatagctaccagaaagactaatccaatccataatgatgtac 451 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 450 cagaaaatacaacatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 391 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 390 cactaatcagtaagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 331 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| || ||||||||||| |||||| ||||| Sbjct: 330 tagtcatgcttgtaatcctccaaactaccaacaaat 295 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 ggaggggtttaatcatgaatccattgattctt 422 |||||| ||| | ||||||||||||||||||| Sbjct: 234 ggagggatttgaccatgaatccattgattctt 203
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 254 bits (128), Expect = 3e-64 Identities = 188/208 (90%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| ||||| |||| |||||||||||||||||||| Sbjct: 37161 aagagatgagagaattaaggatagctaccagaaatactaatccaatccataatgatgtac 37102 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 37101 cagaaaatacaacatttttattatttgaccaaccatcgggagaagcaaatacaacaggta 37042 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37041 cactaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36982 Query: 295 tagtcatatttctaatcctccaagctac 322 || |||| || |||||||||||||||| Sbjct: 36981 taatcatgcttgtaatcctccaagctac 36954
>gb|AY727486.1| Magnolia tripetala PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1055 Score = 254 bits (128), Expect = 3e-64 Identities = 194/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||| Sbjct: 525 aagagatgagagaattaaggatagctaccagaaagactaatccaatccataatgatgtac 466 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 465 cagaaaatacaacatttttgttacttgaccaaccatccgaagaagcaaatacaacgggta 406 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 405 cactaatcagtaagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 346 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| || ||||||||||| |||||| ||||| Sbjct: 345 tagtcatgcttgtaatcctccaaactaccaacaaat 310 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 ggaggggtttaatcatgaatccattgattctt 422 |||||| ||| | ||||||||||||||||||| Sbjct: 249 ggagggatttgaccatgaatccattgattctt 218
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 254 bits (128), Expect = 3e-64 Identities = 188/208 (90%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || |||||||| |||||||||| ||||||||||||||||||||| |||||| Sbjct: 37544 agagaattaaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaat 37485 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 |||| |||||| ||| ||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 37484 acaatatttttgttacttgaccaaccatcagaagaagcaaatacaacgggtacactaatc 37425 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 37424 agtaagattaatgaagttgcaattaatgcaaaaacagctaattggaaagcaatagtcatg 37365 Query: 303 tttctaatcctccaagctaccatcaaat 330 ||| ||||||||||| |||||| ||||| Sbjct: 37364 tttgtaatcctccaaactaccaacaaat 37337
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 254 bits (128), Expect = 3e-64 Identities = 194/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 38136 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 38077 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 38076 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 38017 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | | ||||| ||||| ||| || || |||||||||||||||||||||||||||||||||| Sbjct: 38016 cgccaattaataagattgatgacgtagcaattaatgcaaaaacagctaattggaaagcaa 37957 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 37956 gagtcatgcttttaatcctccaagctaccaacaaat 37921
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 35727 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 35668 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 35667 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 35608 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 35607 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 35548 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 35547 gagtcatgcttttaatcctccaagctaccaacaaat 35512
>gb|AY316647.1| Centaurea vallesiaca tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316646.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316645.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316644.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316643.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316642.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316641.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316640.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316639.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1125 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316638.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316637.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316636.1| Centaurea maculosa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|AY316634.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1125 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 246 bits (124), Expect = 8e-62 Identities = 184/204 (90%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||| ||||| |||||| |||| ||||| |||| ||||||||||||||| ||||||||| Sbjct: 39665 atgagcgaattaagaatacctaccagaaatactaatccaatccataatgacgtaccggaa 39606 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| ||||||||||||| |||||||||||||||| |||||||||| Sbjct: 39605 aatacaacatttttcttacttgaccaaccatcgggagaagcaaatacaacgggtacacta 39546 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 39545 atcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaatagtc 39486 Query: 300 atatttctaatcctccaagctacc 323 || || ||||||||||||||||| Sbjct: 39485 atggttgtaatcctccaagctacc 39462
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| | |||||||| |||||||||||||||||||| Sbjct: 41089 aagagatgagagaattaaggatagctaccaaaaagactaatccaatccataatgatgtac 41030 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | |||||||||| |||||| ||| ||||||||||||||| |||||||||||||| ||||| Sbjct: 41029 ccgaaaatacaatatttttgttacttgaccaaccatcagaagaagcaaatacaacgggta 40970 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 40969 cactaatcagtaagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 40910 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| || ||||||||||||||| || ||||| Sbjct: 40909 tagtcatggttgtaatcctccaagctatcaacaaat 40874
>gb|AY727503.1| Eupatorium rotundifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1112 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 536 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 477 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 476 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 417 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 416 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 357 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 356 gagtcatgcttttaatcctccaagctaccaacaaat 321
>gb|AY727502.1| Eupatorium capillifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1103 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 536 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 477 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 476 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 417 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 416 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 357 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 356 gagtcatgcttttaatcctccaagctaccaacaaat 321
>gb|AY727484.1| Magnolia acuminata PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1055 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || |||||||| | |||||||| |||||||||||||||||||| Sbjct: 525 aagagatgagagaattaaggatagctaccaaaaagactaatccaatccataatgatgtac 466 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||| | |||||||||||||| ||||| Sbjct: 465 cagaaaatacaacatttttgttacttgaccaaccatccgaagaagcaaatacaacgggta 406 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 405 cactaatcagtaagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 346 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 ||||||| || ||||||||||| |||||| ||||| Sbjct: 345 tagtcatgcttgtaatcctccaaactaccaacaaat 310 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 391 ggaggggtttaatcatgaatccattgattctt 422 |||||| ||| | ||||||||||||||||||| Sbjct: 249 ggagggatttgaccatgaatccattgattctt 218
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 246 bits (124), Expect = 8e-62 Identities = 193/216 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 35726 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 35667 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 35666 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 35607 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 35606 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 35547 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 35546 gagtcatgcttttaatcctccaagctaccaacaaat 35511
>gb|AY727477.1| Hibiscus mechowii PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1634 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || ||| | || ||||| |||| |||||||||||| ||||||| Sbjct: 568 aagaaataagagaattaaggatacccactagaaaaactaatccaatccataaagatgtac 509 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||| Sbjct: 508 cggaaaatacaatatttttgttactcaaccaaccatcaggagaagcaaatacaacgggta 449 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 448 cactaatcagtaagattgacgaagtagcaattaatgcaaaaacagccaattggaaagcaa 389 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| |||||||||||||||||||||| |||| Sbjct: 388 tagtcatgtttctaatcctccaagctaccaacaaa 354
>gb|AY727475.1| Hibiscus cannabinus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1515 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || ||| | || ||||| |||| |||||||||||| ||||||| Sbjct: 566 aagaaataagagaattaaggatacccactagaaaaactaatccaatccataaagatgtac 507 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||| Sbjct: 506 cggaaaatacaatatttttgttactcaaccaaccatcaggagaagcaaatacaacgggta 447 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 446 cactaatcagtaagattgacgaagtagcaattaatgcaaaaacagccaattggaaagcaa 387 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| |||||||||||||||||||||| |||| Sbjct: 386 tagtcatgtttctaatcctccaagctaccaacaaa 352
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 244 bits (123), Expect = 3e-61 Identities = 183/203 (90%) Strand = Plus / Plus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||||||||||||||| |||||| | |||||||| |||| |||||||||||||||||||| Sbjct: 24844 aagaaatgagagaattaagaatacccacgagaaacactaatccaatccataatgatgtac 24903 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||| |||| Sbjct: 24904 cggaaaatacaacatttttgttattcgaccaaccttcaggagaagcaaatacaacaggta 24963 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||| | | ||| | |||||||||||||||||||||||||||||||||| Sbjct: 24964 cactaatcaataaaataaatgaaatagcaattaatgcaaaaacagctaattggaaagcaa 25023 Query: 295 tagtcatatttctaatcctccaa 317 ||||||| ||||||||||||||| Sbjct: 25024 tagtcatgtttctaatcctccaa 25046
>gb|AY727499.1| Trilisa paniculata PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1095 Score = 242 bits (122), Expect = 1e-60 Identities = 188/210 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 524 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 465 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 464 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 405 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 404 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 345 Query: 295 tagtcatatttctaatcctccaagctacca 324 |||||| || |||||||||||||||||| Sbjct: 344 gagtcatgcttttaatcctccaagctacca 315
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 238 bits (120), Expect = 2e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 35787 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 35728 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 35727 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 35668 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | | ||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 35667 cgccaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 35608 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 35607 gagtcatgcttttaatcctccaagctaccaacaaat 35572
>gb|AY316635.1| Centaurea diffusa tRNA-Ser (trnS), and ycf9 genes, partial sequence; chloroplast genes for chloroplast products Length = 1126 Score = 238 bits (120), Expect = 2e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 558 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 499 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| |||||||||||||||||||||||||||| | ||||| Sbjct: 498 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatactacgggta 439 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 438 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 379 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 378 gagtcatgcttttaatcctccaagctaccaacaaat 343
>gb|DQ384533.1| Panax ginseng clone PG6L-10 Ycf9 mRNA, complete cds Length = 520 Score = 238 bits (120), Expect = 2e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 409 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 350 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 349 cggaaaataaaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 290 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | | ||||| ||||| | | || || |||||||||||||||||||||||||||||||||| Sbjct: 289 cgccaattaataagattaatgacgtagcaattaatgcaaaaacagctaattggaaagcaa 230 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 229 gagtcatgcttttaatcctccaagctaccaacaaat 194
>gb|AY727501.1| Eupatorium hyssopifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1102 Score = 238 bits (120), Expect = 2e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 536 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 477 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| Sbjct: 476 ctgaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaagacaacgggta 417 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 416 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 357 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 356 gagtcatgcttttaatcctccaagctaccaacaaat 321
>gb|AY727500.1| Carphephorus corymbosus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1093 Score = 238 bits (120), Expect = 2e-59 Identities = 192/216 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 524 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 465 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||| ||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 464 ctgaaaacacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 405 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 404 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 345 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 344 gagtcatgcttttaatcctccaagctaccaacaaat 309
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || ||| | || ||||| |||| |||||||||||| ||||||| Sbjct: 37920 aagaaataagagaattaaggatacccactagaaaaactaatccaatccataaagatgtac 37861 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| | ||||||||||||||||||||||||||| |||| Sbjct: 37860 cggaaaatacaatatttttgttactcaaccaaccatcaggagaagcaaatacaacaggta 37801 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37800 cactaatcagtaagattgacgaagtagcaattaatgcaaaaacagccaattggaaagcaa 37741 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| |||||||||||||||||||||| |||| Sbjct: 37740 tagtcatgtttctaatcctccaagctaccaacaaa 37706
>gb|AC140103.7| Medicago truncatula clone mth2-9i16, complete sequence Length = 96937 Score = 236 bits (119), Expect = 7e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| |||||| | || ||||| |||| |||||||||||||||||||| Sbjct: 60658 aagagatgagagaattaagaatacccactagaaatactaatccaatccataatgatgtac 60599 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 60598 cggaaaatacaacatttttattacttgaccaaccatcaggagaagcaaatacaacaggta 60539 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||| ||| | ||| | || ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 60538 caccaatcaataaaatggatgaagtaacaattaatgcaaaaacagctaattgaaaagcaa 60479 Query: 295 tagtcatatttctaatcctccaa 317 ||||||| ||||||||||||||| Sbjct: 60478 tagtcatgtttctaatcctccaa 60456
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Plus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| ||||||||| |||||||| | Sbjct: 29175 aagagatgagagaattaaggatacccaccagaaagactaatccaatccacaatgatgtgc 29234 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||| || |||||||||||||||| ||||| Sbjct: 29235 cggaaaatacaacatttttgttacttgaccaaccctcgggagaagcaaatacaacgggta 29294 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||| | ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 29295 cactaatcagtaaaagtgatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 29354 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| ||||||||||||||||||||| |||| Sbjct: 29355 tagtcatgcttctaatcctccaagctaccaacaaa 29389
>gb|AC145457.1| Cicer arietinum strain FLIP84-92C clone gl1-40c9, complete sequence Length = 23359 Score = 236 bits (119), Expect = 7e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| |||||| | || ||||| |||| |||||||||||||||||||| Sbjct: 20045 aagagatgagagaattaagaatacccactagaaatactaatccaatccataatgatgtac 19986 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| Sbjct: 19985 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacaggta 19926 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||| | || ||||| ||||||||||||||||| |||||||| ||||||| Sbjct: 19925 cactaatcaataaaatggatgaagtagcaattaatgcaaaaacggctaattgaaaagcaa 19866 Query: 295 tagtcatatttctaatcctccaa 317 ||||||| ||||||||||||||| Sbjct: 19865 tagtcatgtttctaatcctccaa 19843 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 gggtttaatcatgaatccattgatt 419 |||||| |||||||||||||||||| Sbjct: 19748 gggttttatcatgaatccattgatt 19724
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 236 bits (119), Expect = 7e-59 Identities = 182/203 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| |||||| | || ||||| |||| |||||||||||||||||||| Sbjct: 99324 aagagatgagagaattaagaatacccactagaaatactaatccaatccataatgatgtac 99265 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 99264 cggaaaatacaacatttttattacttgaccaaccatcaggagaagcaaatacaacaggta 99205 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||| ||| | ||| | || ||||| ||||||||||||||||||||||||| ||||||| Sbjct: 99204 caccaatcaataaaatggatgaagtaacaattaatgcaaaaacagctaattgaaaagcaa 99145 Query: 295 tagtcatatttctaatcctccaa 317 ||||||| ||||||||||||||| Sbjct: 99144 tagtcatgtttctaatcctccaa 99122
>gb|AY727483.1| Prunus virginiana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1197 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 560 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 501 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||| Sbjct: 500 cggaaaatacaacatttttgttacccgaccaaccctcaggagaagcaaatacaacaggta 441 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 440 cactaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 381 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| ||||||||||||||| |||||| |||| Sbjct: 380 tagtcatgtttctaatcctccaatctaccaacaaa 346
>gb|AY727482.1| Prunus nigra PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1008 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 529 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 470 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||| Sbjct: 469 cggaaaatacaacatttttgttacccgaccaaccctcaggagaagcaaatacaacaggta 410 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 409 cactaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 350 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| ||||||||||||||| |||||| |||| Sbjct: 349 tagtcatgtttctaatcctccaatctaccaacaaa 315
>gb|AY727481.1| Prunus hortulana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1009 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 530 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 471 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||| Sbjct: 470 cggaaaatacaacatttttgttacccgaccaaccctcaggagaagcaaatacaacaggta 411 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 410 cactaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 351 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| ||||||||||||||| |||||| |||| Sbjct: 350 tagtcatgtttctaatcctccaatctaccaacaaa 316
>gb|AY727476.1| Hibiscus macrophyllus PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1532 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || ||| | || ||||| |||| |||||||||||| ||||||| Sbjct: 562 aagaaataagagaattaaggatacccactagaaaaactaatccaatccataaagatgtac 503 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| | ||||||||||||||||||||||||||| ||||| Sbjct: 502 cggaaaatacaatatttttgttactcaaccaaccatcaggagaagcaaatacaacgggta 443 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 442 cactaatcagtaagattgacgaagtagcaattaatgcaaaaacagccaattggaaagcaa 383 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| |||||||||||||||| ||||| |||| Sbjct: 382 tagtcatgtttctaatcctccaaggtaccaacaaa 348
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 236 bits (119), Expect = 7e-59 Identities = 191/215 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||||||||||| Sbjct: 39288 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataatgatgtac 39229 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| | |||||||| ||||||||||||||||||| ||||| Sbjct: 39228 cagaaaatacaacatttttgttactcgaccaaccgtcaggagaagcaaatacaacgggta 39169 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 39168 cactaatcagtaagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 39109 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 ||||||| |||||||||||||| |||||| |||| Sbjct: 39108 tagtcatgtttctaatcctccactctaccaacaaa 39074
>gb|DQ069352.1| Ranunculus macranthus photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 234 bits (118), Expect = 3e-58 Identities = 166/182 (91%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 182 atgagagaattaaggatagctactagaaagactaatccaatccataatgatgtaccggaa 123 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 ||||||| |||||| ||| |||||||||| |||| |||||||||||||| |||||||||| Sbjct: 122 aatacaaaatttttgttacttgaccaaccgtcagaagaagcaaatacaacgggtacacta 63 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 62 atcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaatagtc 3 Query: 300 at 301 || Sbjct: 2 at 1
>gb|AY363054.1| Spiranthes romanzoffiana trnS gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 947 Score = 234 bits (118), Expect = 3e-58 Identities = 181/202 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 ||||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||| Sbjct: 446 agagaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaat 387 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||| |||||| |||||||||||||| |||||||||||| Sbjct: 386 acaacatttttgttacttgaccaatcatcagaagaagcaaatacaacgggtacactaatc 327 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 326 aataagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatg 267 Query: 303 tttctaatcctccaagctacca 324 || | ||||||||| |||||| Sbjct: 266 cttgtcatcctccaaactacca 245
>gb|AF301469.1|AF301469 Spiranthes vernalis tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 476 Score = 230 bits (116), Expect = 4e-57 Identities = 179/200 (89%) Strand = Plus / Minus Query: 125 agaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatac 184 ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct: 476 agaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaatac 417 Query: 185 aacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattac 244 ||||||||| ||| |||||||| |||||| |||||||||||||| |||||||||||| | Sbjct: 416 aacatttttgttacttgaccaatcatcagaagaagcaaatacaacgggtacactaatcaa 357 Query: 245 taagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatt 304 ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct: 356 taagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatgct 297 Query: 305 tctaatcctccaagctacca 324 | | ||||||||| |||||| Sbjct: 296 tgtcatcctccaaactacca 277
>gb|AF301468.1|AF301468 Spiranthes romanzoffiana tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 483 Score = 230 bits (116), Expect = 4e-57 Identities = 179/200 (89%) Strand = Plus / Minus Query: 125 agaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatac 184 ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct: 483 agaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaatac 424 Query: 185 aacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattac 244 ||||||||| ||| |||||||| |||||| |||||||||||||| |||||||||||| | Sbjct: 423 aacatttttgttacttgaccaatcatcagaagaagcaaatacaacgggtacactaatcaa 364 Query: 245 taagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatt 304 ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct: 363 taagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatgct 304 Query: 305 tctaatcctccaagctacca 324 | | ||||||||| |||||| Sbjct: 303 tgtcatcctccaaactacca 284
>gb|AF301467.1|AF301467 Spiranthes magnicamporum tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 476 Score = 230 bits (116), Expect = 4e-57 Identities = 179/200 (89%) Strand = Plus / Minus Query: 125 agaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatac 184 ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct: 476 agaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaatac 417 Query: 185 aacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattac 244 ||||||||| ||| |||||||| |||||| |||||||||||||| |||||||||||| | Sbjct: 416 aacatttttgttacttgaccaatcatcagaagaagcaaatacaacgggtacactaatcaa 357 Query: 245 taagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatt 304 ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct: 356 taagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatgct 297 Query: 305 tctaatcctccaagctacca 324 | | ||||||||| |||||| Sbjct: 296 tgtcatcctccaaactacca 277
>gb|AF301466.1|AF301466 Spiranthes diluvialis tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 483 Score = 230 bits (116), Expect = 4e-57 Identities = 179/200 (89%) Strand = Plus / Minus Query: 125 agaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatac 184 ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct: 483 agaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaatac 424 Query: 185 aacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaattac 244 ||||||||| ||| |||||||| |||||| |||||||||||||| |||||||||||| | Sbjct: 423 aacatttttgttacttgaccaatcatcagaagaagcaaatacaacgggtacactaatcaa 364 Query: 245 taagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatatt 304 ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| | Sbjct: 363 taagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatgct 304 Query: 305 tctaatcctccaagctacca 324 | | ||||||||| |||||| Sbjct: 303 tgtcatcctccaaactacca 284
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 228 bits (115), Expect = 2e-56 Identities = 184/207 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||| ||||||||||||||| Sbjct: 38089 agagaattaaggatacccaccagaaagactaatccaatccataacgatgtaccggaaaat 38030 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 38029 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaatc 37970 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 37969 agtaagattgatgaagtaacaattaatgcaaaaacagccaattggaaagcaatagtcatg 37910 Query: 303 tttctaatcctccaagctaccatcaaa 329 ||||||||||||||| |||||| |||| Sbjct: 37909 tttctaatcctccaatctaccaacaaa 37883
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 228 bits (115), Expect = 2e-56 Identities = 184/207 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||| ||||||||||||||| Sbjct: 38072 agagaattaaggatacccaccagaaagactaatccaatccataacgatgtaccggaaaat 38013 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 38012 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaatc 37953 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 37952 agtaagattgatgaagtaacaattaatgcaaaaacagccaattggaaagcaatagtcatg 37893 Query: 303 tttctaatcctccaagctaccatcaaa 329 ||||||||||||||| |||||| |||| Sbjct: 37892 tttctaatcctccaatctaccaacaaa 37866
>dbj|AB206610.1| Arcterica nana chloroplast DNA, trnS-trnfM intergenic spacer Length = 935 Score = 226 bits (114), Expect = 7e-56 Identities = 183/206 (88%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| || ||| | || ||||| |||| |||||||||||| |||||||||||| Sbjct: 556 atgagagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaa 497 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||| Sbjct: 496 aatacaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgcta 437 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 436 atcaataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtc 377 Query: 300 atatttctaatcctccaagctaccat 325 || || | ||||||||||||||||| Sbjct: 376 attctttttatcctccaagctaccat 351
>dbj|AB206609.1| Pieris floribunda chloroplast DNA, trnS-trnfM intergenic spacer Length = 936 Score = 226 bits (114), Expect = 7e-56 Identities = 183/206 (88%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| || ||| | || ||||| |||| |||||||||||| |||||||||||| Sbjct: 556 atgagagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaa 497 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||| Sbjct: 496 aatacaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgcta 437 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 436 atcaataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtc 377 Query: 300 atatttctaatcctccaagctaccat 325 || || | ||||||||||||||||| Sbjct: 376 attctttttatcctccaagctaccat 351
>dbj|AB206608.1| Pieris phillyreifolia chloroplast DNA, trnS-trnfM intergenic spacer Length = 948 Score = 226 bits (114), Expect = 7e-56 Identities = 183/206 (88%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| || ||| | || ||||| |||| |||||||||||| |||||||||||| Sbjct: 557 atgagagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaa 498 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||| Sbjct: 497 aatacaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgcta 438 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 437 atcaataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtc 378 Query: 300 atatttctaatcctccaagctaccat 325 || || | ||||||||||||||||| Sbjct: 377 attctttttatcctccaagctaccat 352
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37785 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 37726 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 37725 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 37666 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37665 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 37606 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 37605 gagtcatgcttttaatcctccaagctaccaacaaat 37570 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 37490 atcatgaatccattgattct 37471
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37519 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 37460 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 37459 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 37400 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37399 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 37340 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 37339 gagtcatgcttttaatcctccaagctaccaacaaat 37304
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37036 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 36977 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 36976 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 36917 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 36916 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36857 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 36856 gagtcatgcttttaatcctccaagctaccaacaaat 36821 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 36741 atcatgaatccattgattct 36722
>gb|AY727495.1| Solanum ptychanthum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1115 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 551 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 492 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 491 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 432 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 431 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 372 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 371 gagtcatgcttttaatcctccaagctaccaacaaat 336 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 256 atcatgaatccattgattct 237
>gb|AY727494.1| Solanum americanum PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1114 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 551 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 492 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 491 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 432 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 431 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 372 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 371 gagtcatgcttttaatcctccaagctaccaacaaat 336 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 256 atcatgaatccattgattct 237
>gb|AY727493.1| Solanum physalifolium PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1115 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 551 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 492 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 491 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 432 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 431 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 372 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 371 gagtcatgcttttaatcctccaagctaccaacaaat 336 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 256 atcatgaatccattgattct 237
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 36917 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 36858 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 36857 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 36798 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 36797 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36738 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 36737 gagtcatgcttttaatcctccaagctaccaacaaat 36702 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 36622 atcatgaatccattgattct 36603
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37782 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 37723 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 37722 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 37663 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37662 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 37603 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 37602 gagtcatgcttttaatcctccaagctaccaacaaat 37567 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 37487 atcatgaatccattgattct 37468
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37711 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 37652 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 37651 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 37592 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 37591 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 37532 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 37531 gagtcatgcttttaatcctccaagctaccaacaaat 37496 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 37416 atcatgaatccattgattct 37397
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 37040 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 36981 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 36980 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 36921 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 36920 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36861 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 36860 gagtcatgcttttaatcctccaagctaccaacaaat 36825 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 36745 atcatgaatccattgattct 36726
>emb|AJ427520.1|ENA427520 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 25 Length = 1113 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 580 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 521 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 520 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 461 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 460 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 401 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 400 cttttaatcctccacgctaccaacaaat 373
>emb|AJ427519.1|ENA427519 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 24 Length = 1118 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 585 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 526 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 525 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 466 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 465 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 406 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 405 cttttaatcctccacgctaccaacaaat 378
>emb|AJ427518.1|ENA427518 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 06 Length = 1112 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 580 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 521 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 520 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 461 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 460 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 401 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 400 cttttaatcctccacgctaccaacaaat 373
>emb|AJ427517.1|ENA427517 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 05 Length = 1112 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 580 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 521 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 520 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 461 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 460 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 401 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 400 cttttaatcctccacgctaccaacaaat 373
>emb|AJ427516.1|ENA427516 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 04 Length = 1117 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 585 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 526 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 525 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 466 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 465 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 406 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 405 cttttaatcctccacgctaccaacaaat 378
>emb|AJ427515.1|ENA427515 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 03 Length = 1117 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 585 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 526 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 525 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 466 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 465 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 406 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 405 cttttaatcctccacgctaccaacaaat 378
>emb|AJ427514.1|ENA427514 Eritrichium nanum chloroplast tRNA-Ser(UGA) (partial), tRNA-Gly(GCC), tRNA-fMet(CAU) (partial) genes, specimen voucher Population 02 Length = 1114 Score = 222 bits (112), Expect = 1e-54 Identities = 184/208 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| |||| |||||||||| |||| |||||||||||||||||||||| Sbjct: 580 agagaattaaggatacctactagaaagactaaaccaacccataatgatgtaccggaaaat 521 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 520 acaacatttttattacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 461 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| | | ||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 460 aataagattaatgaagtagcaattaatgcaaaaacggccaattggaaagcaagagtcatg 401 Query: 303 tttctaatcctccaagctaccatcaaat 330 || |||||||||| ||||||| ||||| Sbjct: 400 cttttaatcctccacgctaccaacaaat 373
>emb|AJ312393.1|CTR312393 Chloroplast transformation vector pRB95 Length = 7626 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 5681 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 5622 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 5621 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 5562 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 5561 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 5502 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 5501 gagtcatgcttttaatcctccaagctaccaacaaat 5466 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 5386 atcatgaatccattgattct 5367
>emb|AJ312392.1|CTR312392 Chloroplast transformation vector pRB94 Length = 7626 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 5681 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 5622 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 5621 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 5562 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 5561 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 5502 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 5501 gagtcatgcttttaatcctccaagctaccaacaaat 5466 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 5386 atcatgaatccattgattct 5367
>emb|AJ312391.1|CTR312391 Chloroplast transformation vector pRB70 Length = 7454 Score = 222 bits (112), Expect = 1e-54 Identities = 190/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| ||||||| Sbjct: 5748 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggatgtac 5689 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 5688 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 5629 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 5628 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 5569 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 5568 gagtcatgcttttaatcctccaagctaccaacaaat 5533 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 5453 atcatgaatccattgattct 5434
>dbj|AB206605.1| Pieris taiwanensis chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>dbj|AB206604.1| Pieris koidzumiana chloroplast DNA, trnS-trnfM intergenic spacer, country:Japan:Okinawa, Okinawa Island Length = 940 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>dbj|AB206603.1| Pieris koidzumiana chloroplast DNA, trnS-trnfM intergenic spacer, country:Japan:Kagoshima, Amamioshima Island Length = 939 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>dbj|AB206602.1| Pieris japonica var. yakushimensis chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>dbj|AB206601.1| Pieris japonica chloroplast DNA, trnS-trnfM intergenic spacer Length = 939 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||||||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaacatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>gb|AY727498.1| Gratiola brevifolia PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1069 Score = 220 bits (111), Expect = 4e-54 Identities = 192/219 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| |||| |||||||||| |||||||| |||||||||| Sbjct: 503 aagagatgagagaattaaggatacctaccagaaagactaacccaatccacaatgatgtac 444 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||| Sbjct: 443 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacgacaggta 384 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 383 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaaacaa 324 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 |||||| || |||||||||||| ||||| |||||||| Sbjct: 323 gagtcattcttttaatcctccaagataccaacaaataaa 285
>gb|AY727497.1| Gratiola neglecta PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1052 Score = 220 bits (111), Expect = 4e-54 Identities = 192/219 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| |||| |||||||||| |||||||| |||||||||| Sbjct: 507 aagagatgagagaattaaggatacctaccagaaagactaacccaatccacaatgatgtac 448 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||| Sbjct: 447 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacgacaggta 388 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 387 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaaacaa 328 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 |||||| || |||||||||||| ||||| |||||||| Sbjct: 327 gagtcattcttttaatcctccaagataccaacaaataaa 289
>gb|AY727496.1| Gratiola virginiana PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1054 Score = 220 bits (111), Expect = 4e-54 Identities = 192/219 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| |||| |||||||||| |||||||| |||||||||| Sbjct: 503 aagagatgagagaattaaggatacctaccagaaagactaacccaatccacaatgatgtac 444 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||| | |||| Sbjct: 443 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacgacaggta 384 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct: 383 cgctaatcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaaacaa 324 Query: 295 tagtcatatttctaatcctccaagctaccatcaaataaa 333 |||||| || |||||||||||| ||||| |||||||| Sbjct: 323 gagtcattcttttaatcctccaagataccaacaaataaa 285
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 220 bits (111), Expect = 4e-54 Identities = 180/203 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||| ||||| || ||| |||| |||||||||| |||||||||||||| |||| Sbjct: 36628 aagagatgagcgaattaaggatacctaccagaaagactaacccaatccataatgaggtac 36569 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 36568 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 36509 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| || |||||||||||||||||||||| ||| ||||| ||||||| Sbjct: 36508 cactaatcaataagatcgatgaagtcgcaattaatgcaaaaatagccaattgaaaagcaa 36449 Query: 295 tagtcatatttctaatcctccaa 317 ||||||| || ||||||||||| Sbjct: 36448 tagtcatgcttgtaatcctccaa 36426
>gb|DQ069351.1| Nuphar advena photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 218 bits (110), Expect = 2e-53 Identities = 164/182 (90%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||| ||||| |||||| |||| ||||| |||| ||||||||||||||| ||||||||| Sbjct: 182 atgagcgaattaagaatacctaccagaaatactaatccaatccataatgacgtaccggaa 123 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||| ||||||||||||| |||||||||| || |||||||||||||||| |||||||||| Sbjct: 122 aataaaacatttttattacttgaccaaccctcgggagaagcaaatacaacgggtacacta 63 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| ||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 62 atcaataagattgatgaagtagcaattaatgcaaaaacagccaattggaaagcaatagtc 3 Query: 300 at 301 || Sbjct: 2 at 1
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 218 bits (110), Expect = 2e-53 Identities = 176/198 (88%) Strand = Plus / Plus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||||||||| |||||| | || || || |||| | ||||||||||||||||||| ||| Sbjct: 25165 atgagagaattaagaatacccactaggaatactaatgcaatccataatgatgtaccagaa 25224 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| Sbjct: 25225 aatacaacatttttattactcgaccaaccatcaggagaagcaaatacaacaggtacacta 25284 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||| | || ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 25285 atcaataaaatggatgaagtagcaattaatgcaaaaacagctaattggaaagcgatagtc 25344 Query: 300 atatttctaatcctccaa 317 || ||||||||||||||| Sbjct: 25345 atctttctaatcctccaa 25362
>gb|AF301465.1|AF301465 Spiranthes cernua tRNA-Ser gene, partial sequence; chloroplast gene for chloroplast product Length = 502 Score = 216 bits (109), Expect = 7e-53 Identities = 179/201 (89%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 125 agaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaatac 184 ||||||||| |||||||| |||||||||| ||||||||||||||||||||| |||||||| Sbjct: 502 agaattcaggatagctaccagaaagactaatccaatccataatgatgtaccagaaaatac 443 Query: 185 aacatttttattatttgacc-aaccatcaggagaagcaaatacaaggggtacactaatta 243 ||||||||| ||| |||||| || |||||| |||||||||||||| |||||||||||| | Sbjct: 442 aacatttttgttacttgacccaatcatcagaagaagcaaatacaacgggtacactaatca 383 Query: 244 ctaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcatat 303 ||||| | | ||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 382 ataagattaatgaagttgcaattaatgcaaaaatagctaattggaaagcaatagtcatgc 323 Query: 304 ttctaatcctccaagctacca 324 || | ||||||||| |||||| Sbjct: 322 ttgtcatcctccaaactacca 302
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 214 bits (108), Expect = 3e-52 Identities = 189/216 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| || |||| Sbjct: 36892 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggaggtac 36833 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 36832 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 36773 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 36772 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36713 Query: 295 tagtcatatttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 36712 gagtcatgcttttaatcctccaagctaccaacaaat 36677 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 36597 atcatgaatccattgattct 36578
>gb|AY757813.1| Acorus gramineus LhbA (lhbA) mRNA, complete cds; chloroplast Length = 189 Score = 212 bits (107), Expect = 1e-51 Identities = 167/187 (89%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||| ||||| || ||| |||| |||||||||| |||||||||||||| |||| Sbjct: 187 aagagatgagcgaattaaggatacctaccagaaagactaacccaatccataatgaggtac 128 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||| Sbjct: 127 cggaaaatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggta 68 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| || |||||||||||||||||||||| ||| ||||| ||||||| Sbjct: 67 cactaatcaataagatcgatgaagtcgcaattaatgcaaaaatagccaattgaaaagcaa 8 Query: 295 tagtcat 301 ||||||| Sbjct: 7 tagtcat 1
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 212 bits (107), Expect = 1e-51 Identities = 182/207 (87%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| ||||| |||||||||||||| Sbjct: 34830 aagagatgagagaattaaggatacccaccagaaagactaatccaagccataatgatgtac 34771 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 |||||||||||| |||||| ||| |||||||||| || |||||||||||||||| ||||| Sbjct: 34770 cggaaaatacaatatttttgttacttgaccaaccgtcgggagaagcaaatacaacgggta 34711 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct: 34710 cgctaatcagtaagattgatgaagtggcaattaatgcaaaaacagccaattggaaagcta 34651 Query: 295 tagtcatatttctaatcctccaagcta 321 |||||||| | ||||||||||||||| Sbjct: 34650 tagtcatacgtataatcctccaagcta 34624
>dbj|AB206607.1| Pieris formosa chloroplast DNA, trnS-trnfM intergenic spacer Length = 942 Score = 212 bits (107), Expect = 1e-51 Identities = 179/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaccatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>dbj|AB206606.1| Pieris formosa var. forrestii chloroplast DNA, trnS-trnfM intergenic spacer Length = 938 Score = 212 bits (107), Expect = 1e-51 Identities = 179/203 (88%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || ||||| |||| |||||||||||| ||||||||||||||| Sbjct: 553 agagaattaaggatacccaccagaaaaactaatccaatccataaggatgtaccggaaaat 494 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaatt 242 ||| ||||||| ||| |||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 493 acaccatttttcttacttgaccaaccatcaggagaagcaaatacaacgggtacgctaatc 434 Query: 243 actaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtcata 302 | ||||| ||| |||||| ||||||||||||||||||| | |||||||||||||||||| Sbjct: 433 aataagattgatgaagtcacaattaatgcaaaaacagccagttggaaagcaatagtcatt 374 Query: 303 tttctaatcctccaagctaccat 325 || | ||||||||||||||||| Sbjct: 373 ctttttatcctccaagctaccat 351
>gb|DQ069349.1| Acorus americanus photosystem II reaction center Z protein (psbZ) gene, partial cds; chloroplast Length = 186 Score = 210 bits (106), Expect = 4e-51 Identities = 163/182 (89%) Strand = Plus / Minus Query: 120 atgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaa 179 ||||| ||||| || ||| |||| |||||||||| |||||||||||||| ||||||||| Sbjct: 182 atgagcgaattaaggatacctaccagaaagactaacccaatccataatgaggtaccggaa 123 Query: 180 aatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacacta 239 |||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 122 aatacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacgggtacacta 63 Query: 240 attactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatagtc 299 || | ||||| || |||||||||||||||||||||| ||| ||||| |||||||||||| Sbjct: 62 atcaataagatcgatgaagtcgcaattaatgcaaaaatagccaattgaaaagcaatagtc 3 Query: 300 at 301 || Sbjct: 2 at 1
>gb|M27309.1|PEACPD2 Pisum sativum D2 photosystem II protein and 44 kd photosystem II protein genes, complete cds; tRNA-Ser gene, complete sequence; and unknown gene; chloroplast genes for chloroplast products Length = 4078 Score = 206 bits (104), Expect = 6e-50 Identities = 176/200 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| |||||||||||||||||| | || ||||| |||| |||||||||||||||||||| Sbjct: 3753 aagagatgagagaattcagaatacccactagaaatactaatccaatccataatgatgtac 3694 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||| ||||||||||| ||| |||||||||||||||||||||||||||||| |||| Sbjct: 3693 cagaaaagacaacatttttgttacttgaccaaccatcaggagaagcaaatacaacaggta 3634 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||||| ||| | || ||||| ||||||||||||||||||||||||| || |||| Sbjct: 3633 cactaattaataaaatggatgaagtaacaattaatgcaaaaacagctaattgaaacgcaa 3574 Query: 295 tagtcatatttctaatcctc 314 ||||||| ||| ||||||| Sbjct: 3573 tagtcatgtttagaatcctc 3554 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 395 gggtttaatcatgaatccattgatt 419 |||||| |||||||||||||||||| Sbjct: 3461 gggttttatcatgaatccattgatt 3437
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 200 bits (101), Expect = 4e-48 Identities = 189/217 (87%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || |||||||||| |||||||||||| || |||| Sbjct: 36896 aagagatgagagaattaaggatacccaccagaaagactaatccaatccataaggaggtac 36837 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||| ||||||| |||||||||||||||||||||| ||||| Sbjct: 36836 cagaaaatacaacatttttgttacttgaccagccatcaggagaagcaaatacaacgggta 36777 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| | | ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 36776 cgctaatcaataagattaatgaagtagcaattaatgcaaaaacagccaattggaaagcaa 36717 Query: 295 tagtcat-atttctaatcctccaagctaccatcaaat 330 |||||| || |||||||||||||||||| ||||| Sbjct: 36716 gagtcatggcttttaatcctccaagctaccaacaaat 36680 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 atcatgaatccattgattct 421 |||||||||||||||||||| Sbjct: 36600 atcatgaatccattgattct 36581
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 196 bits (99), Expect = 6e-47 Identities = 156/175 (89%) Strand = Plus / Minus Query: 147 aagactagtccaatccataatgatgtaccggaaaatacaacatttttattatttgaccaa 206 ||||||| |||||||||||| |||||||| ||||||||||||||||| ||| | |||||| Sbjct: 35905 aagactaatccaatccataaagatgtaccagaaaatacaacatttttgttactcgaccaa 35846 Query: 207 ccatcaggagaagcaaatacaaggggtacactaattactaagactgaggaagtcgcaatt 266 ||||||||||| |||||||||| |||||||||||| | ||||| ||| ||||| |||| Sbjct: 35845 ccatcaggagacgcaaatacaacgggtacactaatcagtaagattgatgaagtaataatt 35786 Query: 267 aatgcaaaaacagctaattggaaagcaatagtcatatttctaatcctccaagcta 321 ||||||||||| || |||||||||||||||||||| ||| ||||||||||||||| Sbjct: 35785 aatgcaaaaactgccaattggaaagcaatagtcatgtttttaatcctccaagcta 35731
>gb|AY727489.1| Minuartia glabra PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1047 Score = 190 bits (96), Expect = 4e-45 Identities = 159/180 (88%) Strand = Plus / Minus Query: 150 actagtccaatccataatgatgtaccggaaaatacaacatttttattatttgaccaacca 209 |||| ||||||||||||||||||||||||||||| | |||||| ||| ||||||||||| Sbjct: 447 actaatccaatccataatgatgtaccggaaaataagaaatttttgttacttgaccaacca 388 Query: 210 tcaggagaagcaaatacaaggggtacactaattactaagactgaggaagtcgcaattaat 269 || |||||||||||||| | |||||| ||||| | ||||| ||| ||||| || |||||| Sbjct: 387 tctggagaagcaaatacgacgggtacgctaatcagtaagattgatgaagtagcgattaat 328 Query: 270 gcaaaaacagctaattggaaagcaatagtcatatttctaatcctccaagctaccatcaaa 329 ||||||||||| ||||||||||| ||||||||| || |||||||||||||||||| |||| Sbjct: 327 gcaaaaacagccaattggaaagctatagtcatacttataatcctccaagctaccaacaaa 268
>gb|AY727487.1| Minuartia cumberlandensis PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1038 Score = 190 bits (96), Expect = 4e-45 Identities = 159/180 (88%) Strand = Plus / Minus Query: 150 actagtccaatccataatgatgtaccggaaaatacaacatttttattatttgaccaacca 209 |||| ||||||||||||||||||||||||||||| | |||||| ||| ||||||||||| Sbjct: 447 actaatccaatccataatgatgtaccggaaaataagaaatttttgttacttgaccaacca 388 Query: 210 tcaggagaagcaaatacaaggggtacactaattactaagactgaggaagtcgcaattaat 269 || |||||||||||||| | |||||| ||||| | ||||| ||| ||||| || |||||| Sbjct: 387 tctggagaagcaaatacgacgggtacgctaatcagtaagattgatgaagtagcgattaat 328 Query: 270 gcaaaaacagctaattggaaagcaatagtcatatttctaatcctccaagctaccatcaaa 329 ||||||||||| ||||||||||| ||||||||| || |||||||||||||||||| |||| Sbjct: 327 gcaaaaacagccaattggaaagctatagtcatacttataatcctccaagctaccaacaaa 268
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 188 bits (95), Expect = 2e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 147 aagactagtccaatccataatgatgtaccggaaaatacaacatttttattatttgaccaa 206 ||||||| |||||||||||| |||||||| ||||||||||||||||| ||| | ||||| Sbjct: 35087 aagactaatccaatccataaagatgtaccagaaaatacaacatttttgttactcgaccac 35028 Query: 207 ccatcaggagaagcaaatacaaggggtacactaattactaagactgaggaagtcgcaatt 266 ||||||||||| |||||||||| |||||||||||| | ||||| ||| ||||| |||| Sbjct: 35027 ccatcaggagacgcaaatacaacgggtacactaatcagtaagattgatgaagtaataatt 34968 Query: 267 aatgcaaaaacagctaattggaaagcaatagtcatatttctaatcctccaagcta 321 |||||||||||||| ||||| |||||||||||||| ||| ||||||||||||||| Sbjct: 34967 aatgcaaaaacagccaattgaaaagcaatagtcatgtttttaatcctccaagcta 34913
>emb|AM085629.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB19 Length = 1050 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| ||||| |||||||||||||| Sbjct: 541 aagaaataagagaattaaggatccccaccagaaaaactaatccaacccataatgatgtac 482 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 481 cggaaaataagaaatttttgttacttgaccaaccatcgggagaagcaaatacgacgggta 422 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||| | Sbjct: 421 cgctaatcagtaagattgatgaagtagcgattaatgcaaaaacagccaattggaaagcta 362 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 |||||||| || |||||||||||||||||| |||| Sbjct: 361 tagtcatacttataatcctccaagctaccaacaaa 327
>emb|AM085628.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB18 Length = 1050 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| ||||| |||||||||||||| Sbjct: 541 aagaaataagagaattaaggatccccaccagaaaaactaatccaacccataatgatgtac 482 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 481 cggaaaataagaaatttttgttacttgaccaaccatcgggagaagcaaatacgacgggta 422 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||| | Sbjct: 421 cgctaatcagtaagattgatgaagtagcgattaatgcaaaaacagccaattggaaagcta 362 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 |||||||| || |||||||||||||||||| |||| Sbjct: 361 tagtcatacttataatcctccaagctaccaacaaa 327
>emb|AM085627.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB17 Length = 911 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| ||||| |||||||||||||| Sbjct: 541 aagaaataagagaattaaggatccccaccagaaaaactaatccaacccataatgatgtac 482 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 481 cggaaaataagaaatttttgttacttgaccaaccatcgggagaagcaaatacgacgggta 422 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||| | Sbjct: 421 cgctaatcagtaagattgatgaagtagcgattaatgcaaaaacagccaattggaaagcta 362 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 |||||||| || |||||||||||||||||| |||| Sbjct: 361 tagtcatacttataatcctccaagctaccaacaaa 327
>emb|AM085626.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB11 Length = 1050 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| ||||| |||||||||||||| Sbjct: 541 aagaaataagagaattaaggatccccaccagaaaaactaatccaacccataatgatgtac 482 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 481 cggaaaataagaaatttttgttacttgaccaaccatcgggagaagcaaatacgacgggta 422 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||| | Sbjct: 421 cgctaatcagtaagattgatgaagtagcgattaatgcaaaaacagccaattggaaagcta 362 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 |||||||| || |||||||||||||||||| |||| Sbjct: 361 tagtcatacttataatcctccaagctaccaacaaa 327
>emb|AM085625.1| Minuartia biflora chloroplast psbZ gene for photosystem II reaction center Z protein and tRNA-Gly gene for transfer RNA-Gly, isolate MB1 Length = 1050 Score = 188 bits (95), Expect = 2e-44 Identities = 185/215 (86%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| ||||| |||||||||||||| Sbjct: 541 aagaaataagagaattaaggatccccaccagaaaaactaatccaacccataatgatgtac 482 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | ||||| Sbjct: 481 cggaaaataagaaatttttgttacttgaccaaccatcgggagaagcaaatacgacgggta 422 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || ||||||||||||||||| ||||||||||| | Sbjct: 421 cgctaatcagtaagattgatgaagtagcgattaatgcaaaaacagccaattggaaagcta 362 Query: 295 tagtcatatttctaatcctccaagctaccatcaaa 329 |||||||| || |||||||||||||||||| |||| Sbjct: 361 tagtcatacttataatcctccaagctaccaacaaa 327
>gb|AY293379.1| Juglans australis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 6e-44 Identities = 130/142 (91%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccaaccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293372.1| Juglans microcarpa chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 6e-44 Identities = 130/142 (91%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccaaccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293365.1| Juglans ailanthifolia chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 186 bits (94), Expect = 6e-44 Identities = 130/142 (91%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccaaccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY754811.1| Carica papaya RAPD-SCAR marker sequence Length = 614 Score = 180 bits (91), Expect = 4e-42 Identities = 187/219 (85%) Strand = Plus / Plus Query: 111 atttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgat 170 |||||||| ||||||||||| || ||| | || | |||| ||| || || |||||||||| Sbjct: 137 atttaagagatgagagaattaaggatacccaccaaaaagcctaatctaacccataatgat 196 Query: 171 gtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaagg 230 |||| |||||||||| |||| | ||| | |||||| ||||||||||||||||||||| | Sbjct: 197 gtactagaaaatacaatatttctgttactcgaccaatcatcaggagaagcaaatacaatg 256 Query: 231 ggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaa 290 ||||||||||| | ||||| | | ||||| ||||||||||||||| ||| ||||||||| Sbjct: 257 ggtacactaatcagtaagatttatgaagtagcaattaatgcaaaactagccaattggaaa 316 Query: 291 gcaatagtcatatttctaatcctccaagctaccatcaaa 329 ||||||||||| ||||||||||||||||| |||| |||| Sbjct: 317 gcaatagtcatgtttctaatcctccaagcaaccaacaaa 355
>gb|AY293377.1| Juglans californica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 4e-42 Identities = 129/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293375.1| Juglans mollis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 4e-42 Identities = 129/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293373.1| Juglans hindsii chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 180 bits (91), Expect = 4e-42 Identities = 129/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293376.1| Juglans cinerea chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | | ||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgnccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293371.1| Juglans hopeiensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 ||||||| |||||||||| ||| | |||||||||||||||||||||||||||| |||| | Sbjct: 559 ggaaaatncaacatttttgttactcgaccaaccatcaggagaagcaaatacaacgggtnc 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293370.1| Juglans sigillata chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 174 bits (88), Expect = 2e-40 Identities = 128/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | | ||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgnccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293374.1| Juglans guatemalensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 172 bits (87), Expect = 9e-40 Identities = 128/142 (90%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | | ||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgcccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293364.1| Juglans mandshurica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 168 bits (85), Expect = 1e-38 Identities = 127/142 (89%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | | ||| |||||||||||||||||||||| |||| | Sbjct: 559 ggaaaatacaacatttttgttactcgnccanccatcaggagaagcaaatacaacgggtnc 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293378.1| Juglans major chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 165 bits (83), Expect = 2e-37 Identities = 128/142 (90%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||||||| ||| || Sbjct: 558 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatacaacggg-ac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293368.1| Juglans neotropica chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 165 bits (83), Expect = 2e-37 Identities = 128/142 (90%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||||||| ||| || Sbjct: 558 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatacaacggg-ac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293367.1| Juglans cathayensis chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 165 bits (83), Expect = 2e-37 Identities = 124/138 (89%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | | ||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaacatttttgttactcgcccanccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcct 313 |||||| ||||||||||| Sbjct: 439 agtcatgtttctaatcct 422
>gb|AY525366.1| Fagus grandifolia Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 690 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 | ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| Sbjct: 91 cagaaaatacaacatttttgttattcgaccaaccatcaggagaagcaaatacaacgggta 32 Query: 235 cactaattactaagactgaggaagtcgcaat 265 ||||||| | ||||| ||| ||||| ||||| Sbjct: 31 cactaatcagtaagattgatgaagtagcaat 1
>gb|AY525365.1| Quercus falcata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 834 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525364.1| Castanea crenata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 848 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525363.1| Castanea crenata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 848 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525362.1| Castanea henryi Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 799 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525361.1| Castanea henryi Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 799 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525360.1| Castanea seguinii haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525359.1| Castanea seguinii haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 833 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525358.1| Castanea seguinii haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525357.1| Castanea seguinii haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 833 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525356.1| Castanea mollissima haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 798 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525355.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525354.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525353.1| Castanea mollissima haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 812 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525352.1| Castanea sativa Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 806 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525351.1| Castanea sativa Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 806 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525350.1| Castanea pumila var. ozarkensis Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 841 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525349.1| Castanea pumila var. ozarkensis Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 841 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525348.1| Castanea pumila var. pumila haplotype II Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525347.1| Castanea pumila var. pumila haplotype I Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 837 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525346.1| Castanea dentata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY525345.1| Castanea dentata Ycf9 (ycf9) gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and trnG gene, partial sequence; chloroplast Length = 820 Score = 165 bits (83), Expect = 2e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 |||| ||||||||||| || ||| | || | |||||||| |||||||||||||||||||| Sbjct: 151 aagagatgagagaattaaggatacccaccaaaaagactaatccaatccataatgatgtac 92 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 91 cggaaaatacaacatttttgttatttgaccaaccatcaggagaagcaaatacaacaggta 32 Query: 235 cactaat 241 ||||||| Sbjct: 31 cactaat 25
>gb|AY293369.1| Juglans regia chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 559 Score = 163 bits (82), Expect = 9e-37 Identities = 127/142 (89%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||| ||||||| ||| | | ||| |||||||||||||||||||||| |||||| Sbjct: 559 ggaaaatacaccatttttgttactcgcccacccatcaggagaagcaaatacaacgggtac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY293366.1| Juglans nigra chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 159 bits (80), Expect = 1e-35 Identities = 127/142 (89%), Gaps = 1/142 (0%) Strand = Plus / Minus Query: 176 ggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtac 235 |||||||||||||||||| ||| | ||||| |||||||||||||||||| || ||| ||| Sbjct: 558 ggaaaatacaacatttttgttactcgaccanccatcaggagaagcaaatncacggg-tac 500 Query: 236 actaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaat 295 |||||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 499 actaatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaat 440 Query: 296 agtcatatttctaatcctccaa 317 |||||| ||||||||||||||| Sbjct: 439 agtcatgtttctaatcctccaa 418
>gb|AY727488.1| Minuartia uniflora PsbZ (psbZ) gene, complete cds; and tRNA-Gly (trnG) gene, complete sequence; chloroplast Length = 1018 Score = 159 bits (80), Expect = 1e-35 Identities = 185/220 (84%), Gaps = 5/220 (2%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatgtac 174 ||||||| |||||||| || || | || ||||| |||| |||||||||||||||||||| Sbjct: 493 aagaaataagagaattaaggatccccaccagaaaaactaatccaatccataatgatgtac 434 Query: 175 cggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggta 234 ||||||||| | |||||| ||| ||||||||||||| |||||||||||||| | |||| Sbjct: 433 cggaaaataagaaatttttgttacttgaccaaccatctggagaagcaaatacgacaggta 374 Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 | ||||| | ||||| ||| ||||| || |||||||| |||||||| ||||||||||| | Sbjct: 373 cgctaatcagtaagattgatgaagtagcgattaatgccaaaacagccaattggaaagcta 314 Query: 295 tagtcatatt-----tctaatcctccaagctaccatcaaa 329 |||||||| | |||||||||||||||||||| |||| Sbjct: 313 tagtcatacttataatctaatcctccaagctaccaacaaa 274
>gb|AY522542.1| Citrullus rehmii isolate NAM1887 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522541.1| Citrullus rehmii isolate NAM1303 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522540.1| Citrullus lanatus var. lanatus isolate AUProducer Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 574 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522539.1| Citrullus lanatus var. lanatus isolate PI494529 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522538.1| Citrullus lanatus var. lanatus isolate PI179881 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522537.1| Citrullus lanatus var. citroides isolate NAM1884 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522536.1| Citrullus lanatus var. citroides isolate NAM1612 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522535.1| Citrullus lanatus var. citroides isolate PI431727 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522534.1| Citrullus lanatus var. citroides isolate PI271769 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 575 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522533.1| Citrullus ecirrhosus isolate NAM956 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 580 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522532.1| Citrullus ecirrhosus isolate NAM47 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 578 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 131 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 72 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 71 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 13
>gb|AY522531.1| Citrullus colocynthis isolate PI637255 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522530.1| Citrullus colocynthis isolate PI549161 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522529.1| Citrullus colocynthis isolate PI537277 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522528.1| Citrullus colocynthis isolate PI269365 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522527.1| Citrullus colocynthis isolate PI195927 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY522526.1| Citrullus colocynthis isolate TCN955 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 702 Score = 141 bits (71), Expect = 3e-30 Identities = 107/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| |||||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatccaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY293380.1| Juglans olanchana chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 558 Score = 137 bits (69), Expect = 5e-29 Identities = 121/140 (86%) Strand = Plus / Minus Query: 178 aaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacac 237 ||||| || ||||||| ||| | | || |||||||| |||||||||| || |||||||| Sbjct: 556 aaaatncaccatttttgttactcgncccaccatcagnagaagcaaatncancgggtacac 497 Query: 238 taattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaatag 297 |||| | ||||| ||| ||||| |||||||| ||||||||||| |||||||||||||||| Sbjct: 496 taatcagtaagattgatgaagtagcaattaacgcaaaaacagccaattggaaagcaatag 437 Query: 298 tcatatttctaatcctccaa 317 |||| ||||||||||||||| Sbjct: 436 tcatgtttctaatcctccaa 417
>dbj|AB116593.1| Cycas panzhihuaensis chloroplast DNA, intergenic spacer region, partial sequence Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 110 aatttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatga 169 ||||||||| |||| |||||| || ||| |||| | |||||||| ||||||||||||||| Sbjct: 162 aatttaagatatgaaagaattaaggatacctaccaaaaagactaatccaatccataatga 221 Query: 170 tgtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaag 229 || || ||||||| ||||||||| ||| ||||||||||||||||||| |||| ||| | Sbjct: 222 tgcgcccgaaaatataacatttttgttacttgaccaaccatcaggagaggcaagtacgac 281 Query: 230 gggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaa 289 ||||||| ||| |||| || | ||| | |||||||||||||| || || |||||||| Sbjct: 282 aggtacaccaatcactaggaggaatgaaatagcaattaatgcaaacacggccaattggaa 341 Query: 290 agcaatagtcat 301 |||||||||||| Sbjct: 342 agcaatagtcat 353
>dbj|AB116592.1| Cycas taitungensis chloroplast DNA, intergenic spacer region, partial sequence Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 110 aatttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatga 169 ||||||||| |||| |||||| || ||| |||| | |||||||| ||||||||||||||| Sbjct: 162 aatttaagatatgaaagaattaaggatacctaccaaaaagactaatccaatccataatga 221 Query: 170 tgtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaag 229 || || ||||||| ||||||||| ||| ||||||||||||||||||| |||| ||| | Sbjct: 222 tgcgcccgaaaatataacatttttgttacttgaccaaccatcaggagaggcaagtacgac 281 Query: 230 gggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaa 289 ||||||| ||| |||| || | ||| | |||||||||||||| || || |||||||| Sbjct: 282 aggtacaccaatcactaggaggaatgaaatagcaattaatgcaaacacggccaattggaa 341 Query: 290 agcaatagtcat 301 |||||||||||| Sbjct: 342 agcaatagtcat 353
>dbj|AB101678.2| Cycas revoluta chloroplast gene for tRNA-Ser, intergenic spacer region, north type Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 110 aatttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatga 169 ||||||||| |||| |||||| || ||| |||| | |||||||| ||||||||||||||| Sbjct: 162 aatttaagatatgaaagaattaaggatacctaccaaaaagactaatccaatccataatga 221 Query: 170 tgtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaag 229 || || ||||||| ||||||||| ||| ||||||||||||||||||| |||| ||| | Sbjct: 222 tgcgcccgaaaatagaacatttttgttacttgaccaaccatcaggagaggcaagtacgac 281 Query: 230 gggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaa 289 ||||||| ||| |||| || | ||| | |||||||||||||| || || |||||||| Sbjct: 282 aggtacaccaatcactaggaggaatgaaatagcaattaatgcaaacacggccaattggaa 341 Query: 290 agcaatagtcat 301 |||||||||||| Sbjct: 342 agcaatagtcat 353
>dbj|AB100596.2| Cycas revoluta chloroplast gene for tRNA-Ser, intergenic spacer region, south type Length = 669 Score = 135 bits (68), Expect = 2e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 110 aatttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatga 169 ||||||||| |||| |||||| || ||| |||| | |||||||| ||||||||||||||| Sbjct: 162 aatttaagatatgaaagaattaaggatacctaccaaaaagactaatccaatccataatga 221 Query: 170 tgtaccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaag 229 || || ||||||| ||||||||| ||| ||||||||||||||||||| |||| ||| | Sbjct: 222 tgcgcccgaaaatataacatttttgttacttgaccaaccatcaggagaggcaagtacgac 281 Query: 230 gggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaa 289 ||||||| ||| |||| || | ||| | |||||||||||||| || || |||||||| Sbjct: 282 aggtacaccaatcactaggaggaatgaaatagcaattaatgcaaacacggccaattggaa 341 Query: 290 agcaatagtcat 301 |||||||||||| Sbjct: 342 agcaatagtcat 353
>gb|AY522525.1| Praecitrullus fistulosus isolate PI540917 Ycf9 gene, partial cds; ycf9-trnG intergenic spacer, complete sequence; and tRNA-Gly (trnG) gene, partial sequence Length = 686 Score = 133 bits (67), Expect = 8e-28 Identities = 106/119 (89%) Strand = Plus / Minus Query: 123 agagaattcagaatagctacgagaaagactagtccaatccataatgatgtaccggaaaat 182 |||||||| || ||| | || |||||||||| | |||||||||||||||||||||||||| Sbjct: 132 agagaattaaggatacccaccagaaagactaatgcaatccataatgatgtaccggaaaat 73 Query: 183 acaacatttttattatttgaccaaccatcaggagaagcaaatacaaggggtacactaat 241 ||||||||||| ||| |||||||||||||||||||||||||||| ||| |||||||| Sbjct: 72 acaacatttttgttacccgaccaaccatcaggagaagcaaatacaacgggcacactaat 14
>gb|AY337664.1| Pandanus princeps isolate Sp_22 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 496 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 427 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 368 Query: 295 tagtcatatttctaatcctccaagctacca 324 ||||||| ||| |||||||||||||||||| Sbjct: 367 tagtcatgtttgtaatcctccaagctacca 338 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 tttaatcatgaatccattgattctt 422 |||||||||||||| |||||||||| Sbjct: 284 tttaatcatgaatcaattgattctt 260
>gb|AY293381.1| Pterocarya stenoptera chloroplast trnS-trnfM intergenic spacer, partial sequence Length = 571 Score = 123 bits (62), Expect = 8e-25 Identities = 98/111 (88%) Strand = Plus / Minus Query: 207 ccatcaggagaagcaaatacaaggggtacactaattactaagactgaggaagtcgcaatt 266 ||||||| |||||||||| || |||| ||||||| | ||||| ||| ||||| |||||| Sbjct: 539 ccatcagnagaagcaaatncaccgggtncactaatcagtaagattgatgaagtagcaatt 480 Query: 267 aatgcaaaaacagctaattggaaagcaatagtcatatttctaatcctccaa 317 || ||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 479 aacgcaaaaacagccaattggaaagcaatagtcatgtttctaatcctccaa 429
>gb|AY337661.1| Cyclanthus bipartitus isolate Sp_19 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 484 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 418 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 359 Query: 295 tagtcatatttctaatcctccaagct 320 ||||||| ||| |||||||||||||| Sbjct: 358 tagtcatgtttgtaatcctccaagct 333
>gb|AY337653.1| Pandanus palustris isolate Sp_11 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 498 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 427 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 368 Query: 295 tagtcatatttctaatcctccaagct 320 ||||||| ||| |||||||||||||| Sbjct: 367 tagtcatgtttgtaatcctccaagct 342 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 tttaatcatgaatccattgattctt 422 |||||||||||||| |||||||||| Sbjct: 283 tttaatcatgaatcaattgattctt 259
>gb|AY337650.1| Pandanus maximus isolate Sp_8 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 497 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 369 Query: 295 tagtcatatttctaatcctccaagct 320 ||||||| ||| |||||||||||||| Sbjct: 368 tagtcatgtttgtaatcctccaagct 343 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 tttaatcatgaatccattgattctt 422 |||||||||||||| |||||||||| Sbjct: 284 tttaatcatgaatcaattgattctt 260
>gb|AY337644.1| Pandanus eydouxia isolate Sp_2 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 496 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 427 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 368 Query: 295 tagtcatatttctaatcctccaagct 320 ||||||| ||| |||||||||||||| Sbjct: 367 tagtcatgtttgtaatcctccaagct 342 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 tttaatcatgaatccattgattctt 422 |||||||||||||| |||||||||| Sbjct: 283 tttaatcatgaatcaattgattctt 259
>gb|AY337643.1| Pandanus microcarpus isolate Sp_1 chloroplast trnS-ycf9 intergenic spacer, complete sequence Length = 499 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 235 cactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaagcaa 294 ||||||| | ||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cactaatcagtaagattgatgaagtcgcaattaatgcaaaaacagctaattggaaagcaa 369 Query: 295 tagtcatatttctaatcctccaagct 320 ||||||| ||| |||||||||||||| Sbjct: 368 tagtcatgtttgtaatcctccaagct 343 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 398 tttaatcatgaatccattgattctt 422 |||||||||||||| |||||||||| Sbjct: 284 tttaatcatgaatcaattgattctt 260
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 123 bits (62), Expect = 8e-25 Identities = 158/190 (83%) Strand = Plus / Plus Query: 112 tttaagaaatgagagaattcagaatagctacgagaaagactagtccaatccataatgatg 171 ||||||| |||| |||||| |||| | | || | ||| |||| ||||| ||||||||| | Sbjct: 41445 tttaagatatgaaagaattaagaacaccaaccaaaaaaactaatccaacccataatgaag 41504 Query: 172 taccggaaaatacaacatttttattatttgaccaaccatcaggagaagcaaatacaaggg 231 ||| |||||||||||||||||| || ||||||||||||||||||| |||| |||| | Sbjct: 41505 cacctgaaaatacaacatttttactacttgaccaaccatcaggagaggcaagcacaacag 41564 Query: 232 gtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaaag 291 |||||| ||||||||| | | ||| | |||||||||||||| ||||| || ||||||| Sbjct: 41565 gtacaccaattactaaaagaaatgaaatagcaattaatgcaaacacagcgaactggaaag 41624 Query: 292 caatagtcat 301 |||||||||| Sbjct: 41625 caatagtcat 41634
>gb|AY642484.1| Cypripedium parviflorum var. parviflorum tRNA-Ser (trnS) gene and trnS-trnfM intergenic spacer, partial sequence; chloroplast Length = 809 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 230 gggtacactaattactaagactgaggaagtcgcaattaatgcaaaaacagctaattggaa 289 |||||||||||| | ||||| | | ||||| ||||||||||||||||||||||||||||| Sbjct: 389 gggtacactaatcagtaagattaatgaagttgcaattaatgcaaaaacagctaattggaa 330 Query: 290 agcaatagtcatatttctaatcctccaagctaccatcaaat 330 |||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 329 agcaatagtcatgtttgtaatcctccaaactaccaacaaat 289 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 115 aagaaatgagagaattcagaatagctacgagaaagactagtccaa 159 |||| |||||||||||||| |||||||| |||||||||| ||||| Sbjct: 435 aagagatgagagaattcaggatagctaccagaaagactaatccaa 391 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,013,792 Number of Sequences: 3902068 Number of extensions: 9013792 Number of successful extensions: 220695 Number of sequences better than 10.0: 426 Number of HSP's better than 10.0 without gapping: 434 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 217905 Number of HSP's gapped (non-prelim): 2703 length of query: 637 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 614 effective length of database: 17,143,297,704 effective search space: 10525984790256 effective search space used: 10525984790256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
