Clone Name | rbasd2a06 |
---|---|
Clone Library Name | barley_pub |
>XYND_CELFI (P54865) Endo-1,4-beta-xylanase D precursor (EC 3.2.1.8) (Xylanase| D) (XYLD) Length = 644 Score = 32.7 bits (73), Expect = 1.1 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 4/102 (3%) Frame = -1 Query: 470 WSS-INTRLARDGGSPW*IERT-TGKKATRAMDSTVE*GSSKTRTKSP--SGSSYGQQIP 303 WS N + G S W + G + +A + GS TRT +P SG+++G + Sbjct: 259 WSDRFNVTYSVSGSSAWTVNLALNGSQTIQASWNANVTGSGSTRTVTPNGSGNTFGVTVM 318 Query: 302 WNNGIIQPLLTPQSSWLIGMPSIDPTRTPTISHTLRSSCTQG 177 N P T S G + PT TPT + T SC+ G Sbjct: 319 KNGSSTTPAATCAGS---GGGTATPTPTPTPTPT-PQSCSAG 356
>MAUE_PARVE (Q56460) Methylamine utilization protein mauE| Length = 186 Score = 30.4 bits (67), Expect = 5.5 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = -2 Query: 235 LIPPVLPPSATPSVQVVHRDRTRGGKFWWLDTAVNLLSGKIKADCGCFTSSVYNR 71 +IP + P+A + ++ G F L AVN+L G+ + DCGCF + + R Sbjct: 70 MIPALAAPAALAAAALL-------GVFG-LAIAVNVLRGRTQIDCGCFRNGMKQR 116
>FAAH_MOUSE (O08914) Fatty-acid amide hydrolase (EC 3.1.-.-) (Oleamide| hydrolase) (Anandamide amidohydrolase) Length = 579 Score = 30.0 bits (66), Expect = 7.2 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +1 Query: 331 LGDFVLVLELP--YSTVESIALVAFFPVVLSIYQGLPPSRARRVLIELQH 474 LGD VLVL+LP + + S L FP + + + P A + L ELQH Sbjct: 401 LGDLVLVLKLPRWFKKLLSFLLKPLFPRLAAFLNSMCPRSAEK-LWELQH 449
>CD44_PAPHA (P14745) CD44 antigen precursor (Phagocytic glycoprotein I) (PGP-1)| (HUTCH-I) (Extracellular matrix receptor-III) (ECMR-III) (GP90 lymphocyte homing/adhesion receptor) (Hermes antigen) (Hyaluronate receptor) Length = 362 Score = 30.0 bits (66), Expect = 7.2 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Frame = -1 Query: 440 DGGSPW*IERTTGKKATRAMDSTVE*GSSKTRTKSPS-GSSYGQQIPWNNGIIQPLLTPQ 264 D PW + T ATR + G S T S S G S+G + N PL TPQ Sbjct: 207 DEDGPWITDSTDRTPATRDQGAFDPSGGSHTTHGSESAGHSHGSREGGANTTSGPLRTPQ 266 Query: 263 -SSWLIGMPSI 234 WLI + S+ Sbjct: 267 IPEWLIILASL 277
>PCE_TACTR (P21902) Proclotting enzyme precursor (EC 3.4.21.86) [Contains:| Proclotting enzyme light chain; Proclotting enzyme heavy chain] Length = 375 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/51 (25%), Positives = 27/51 (52%) Frame = +1 Query: 373 VESIALVAFFPVVLSIYQGLPPSRARRVLIELQHHDVCNNIPTQESVCSEI 525 V ++ + FP+++S+ + SR RR + ++C+N T+E C + Sbjct: 3 VNNVFSLLCFPLLMSVVRCSTLSRQRRQFVFPDEEELCSNRFTEEGTCKNV 53
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 359 SSKTRTKSPSGSSYGQQIPWNNGI 288 SS + + +PSGSSYG+ PW NG+ Sbjct: 677 SSSSISAAPSGSSYGK--PWTNGV 698
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 30.0 bits (66), Expect = 7.2 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = -1 Query: 359 SSKTRTKSPSGSSYGQQIPWNNGI 288 SS + + +PSGSSYG+ PW NG+ Sbjct: 677 SSSSISAAPSGSSYGK--PWTNGV 698
>AROB_BUCAI (P57604) 3-dehydroquinate synthase (EC 4.2.3.4)| Length = 363 Score = 29.6 bits (65), Expect = 9.4 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -2 Query: 145 DTAVNLLSGKIKADCGCFTSSVYNRSLRFFLPAVVVLEQKD 23 DT + L G + D F +SVY R +RF +L Q D Sbjct: 99 DTTLIALGGGVIGDLAGFAASVYQRGVRFIQIPTTLLSQVD 139 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,962,957 Number of Sequences: 219361 Number of extensions: 2262561 Number of successful extensions: 5746 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 5562 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5746 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7139613222 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)