Clone Name | rbasd1l06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SERR_DROME (P18168) Serrate protein precursor (Protein beaded) | 30 | 1.1 | 2 | CVRA_PSEAE (Q9HUE8) Cell volume regulation protein A homolog | 28 | 4.1 | 3 | MDM4_HUMAN (O15151) Mdm4 protein (p53-binding protein Mdm4) (Mdm... | 27 | 9.1 |
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>SERR_DROME (P18168) Serrate protein precursor (Protein beaded)| Length = 1404 Score = 30.4 bits (67), Expect = 1.1 Identities = 21/71 (29%), Positives = 31/71 (43%) Frame = +2 Query: 131 LTCDHTNCSKYFPAS*AVN*EGACSLFQTMAAASQ*IHQSTMSSPICCRMHGEQPFMSRY 310 L C NC K P S + N G C + A + ++ +SSP C + G+ + Sbjct: 1008 LWCGLPNCYKVDPLSKSSNLSGVCKQHEVCVPA---LSETCLSSP--CNVRGDCRALEPS 1062 Query: 311 NQFDPPYLSAK 343 + PP L AK Sbjct: 1063 RRVAPPRLPAK 1073
>CVRA_PSEAE (Q9HUE8) Cell volume regulation protein A homolog| Length = 580 Score = 28.5 bits (62), Expect = 4.1 Identities = 12/24 (50%), Positives = 18/24 (75%) Frame = +1 Query: 52 EMFMYHLSYKLNLKWCIASELRKL 123 E+F+YHL+ + KWCI + LR+L Sbjct: 415 ELFVYHLNKE---KWCIGAALREL 435
>MDM4_HUMAN (O15151) Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like| p53-binding protein) (Mdmx protein) (Double minute 4 protein) Length = 490 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = -3 Query: 118 FSTQRQCTISNSACRI 71 FST QC+ S+SACRI Sbjct: 4 FSTSAQCSTSDSACRI 19 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,620,323 Number of Sequences: 219361 Number of extensions: 892881 Number of successful extensions: 1749 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1732 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1749 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)