Clone Name | rbasd1l05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | KR151_CAPHI (Q6R645) Keratin-associated protein 15-1 (Keratin-as... | 32 | 1.4 | 2 | FA40B_MOUSE (Q8C9H6) Protein FAM40B | 31 | 4.1 | 3 | HSP71_PICAN (P53421) Heat-shock protein 70 1 (HSP72) | 30 | 9.1 | 4 | GPR20_HUMAN (Q99678) Probable G-protein coupled receptor 20 | 30 | 9.1 |
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>KR151_CAPHI (Q6R645) Keratin-associated protein 15-1 (Keratin-associated| protein 15.1) Length = 136 Score = 32.3 bits (72), Expect = 1.4 Identities = 22/52 (42%), Positives = 25/52 (48%) Frame = +3 Query: 114 PCQSHYTSALKSGNIGQTKGKYIYMSTSVQVTDASKYCHHRQNRCSPTMTSS 269 PCQ+ YT +L SGNIG G + ST Q N CSPT SS Sbjct: 85 PCQTIYTGSLGSGNIG--LGSFGCGSTGFQSLGCG------SNFCSPTYVSS 128
>FA40B_MOUSE (Q8C9H6) Protein FAM40B| Length = 844 Score = 30.8 bits (68), Expect = 4.1 Identities = 12/40 (30%), Positives = 21/40 (52%) Frame = -2 Query: 645 NPKGQSGGGTADGKSQGSPAKGRVAYKDGKQFYPNESSES 526 +P +G G +G G+ KG+ A G++ + N+ ES Sbjct: 12 SPANDNGNGNGNGNGNGNGGKGKPAVPKGRETFRNQRRES 51
>HSP71_PICAN (P53421) Heat-shock protein 70 1 (HSP72)| Length = 644 Score = 29.6 bits (65), Expect = 9.1 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = -2 Query: 504 HYGGRDFYDSSPHKQANESSRNYKEDNTDGSLATR 400 H GG DF + + ANE R YK+D T A R Sbjct: 226 HLGGEDFDNRLVNHFANEFKRKYKKDLTTNQRALR 260
>GPR20_HUMAN (Q99678) Probable G-protein coupled receptor 20| Length = 358 Score = 29.6 bits (65), Expect = 9.1 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -1 Query: 595 KPC*RSCCLQRWKTILPKRVLRVALFWFVCALRRPGLL*Q 476 +PC R L + +LP V+ V +CAL RPGLL Q Sbjct: 192 RPCCRVFALTVLEFLLPLLVISVFTGRIMCALSRPGLLHQ 231 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,442,357 Number of Sequences: 219361 Number of extensions: 2328866 Number of successful extensions: 6834 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 6581 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6824 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6882837918 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)