ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1k15 |
|---|---|
| Clone Library Name | barley_pub |
>STALP_MOUSE (Q76N33) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) (AMSH family protein) (AMSH-FP) Length = 436 Score = 130 bits (326), Expect = 4e-30 Identities = 71/131 (54%), Positives = 87/131 (66%), Gaps = 1/131 (0%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ + D C+ N EELF VQD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 314 PKQSAGPDYCDVENVEELFNVQDQHGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPE 373 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPH-KAPLDGSPIYEHCSHVYMN 295 AIAIV +P K GIF LT+ G + V C ++GFHPH K P ++ CSHV + Sbjct: 374 AIAIVCSP--KHKDTGIFRLTNAGMLEV-STCKKKGFHPHTKDP----KLFSICSHVLVK 426 Query: 294 ADAKFDMIDLR 262 D K ++DLR Sbjct: 427 -DIKTTVLDLR 436
>STABP_HUMAN (O95630) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 128 bits (321), Expect = 2e-29 Identities = 67/130 (51%), Positives = 85/130 (65%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ + SD C NEEELF +QD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 302 PKQSAGSDYCNTENEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 361 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPHKAPLDGSPIYEHCSHVYMNA 292 ++AIV +P ++ G F LTD G+ I C ++GFHPH P++ CSHV + Sbjct: 362 SVAIVCSP--KFQETGFFKLTD-HGLEEISSCRQKGFHPHS---KDPPLFCSCSHVTV-V 414 Query: 291 DAKFDMIDLR 262 D + DLR Sbjct: 415 DRAVTITDLR 424
>STALP_HUMAN (Q96FJ0) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 127 bits (320), Expect = 2e-29 Identities = 70/131 (53%), Positives = 86/131 (65%), Gaps = 1/131 (0%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ + D C+ N EELF VQD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 314 PKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLPE 373 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPH-KAPLDGSPIYEHCSHVYMN 295 AIAIV +P K GIF LT+ G + V C ++GFHPH K P ++ C HV + Sbjct: 374 AIAIVCSP--KHKDTGIFRLTNAGMLEV-SACKKKGFHPHTKEP----RLFSICKHVLVK 426 Query: 294 ADAKFDMIDLR 262 D K ++DLR Sbjct: 427 -DIKIIVLDLR 436
>STALP_PONPY (Q5R558) AMSH-like protease (EC 3.1.2.15) (AMSH-LP) (STAM-binding| protein-like 1) Length = 436 Score = 125 bits (313), Expect = 1e-28 Identities = 69/131 (52%), Positives = 85/131 (64%), Gaps = 1/131 (0%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ + D C+ N EELF VQD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+ML E Sbjct: 314 PKQSAGPDYCDVENVEELFNVQDQHDLLTLGWIHTHPTQTAFLSSVDLHTHCSYQLMLSE 373 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPH-KAPLDGSPIYEHCSHVYMN 295 AIAIV +P K GIF LT+ G + V C ++GFHPH K P ++ C HV + Sbjct: 374 AIAIVCSP--KHKDTGIFRLTNAGMLEV-SACKKKGFHPHTKEP----RLFSICKHVLVK 426 Query: 294 ADAKFDMIDLR 262 D K ++DLR Sbjct: 427 -DIKIIVLDLR 436
>STABP_BRARE (Q6TH47) STAM-binding protein-like (EC 3.1.2.15)| Length = 418 Score = 124 bits (312), Expect = 2e-28 Identities = 68/130 (52%), Positives = 84/130 (64%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ D C+ NEEELF +QD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 296 PKQCGGPDYCDTENEEELFLIQDQNDLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 355 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPHKAPLDGSPIYEHCSHVYMNA 292 +IAIV +P + G F LTD G+ + C +RGFHPH P D P++ HV + Sbjct: 356 SIAIVCSP--KFNETGYFRLTD-YGMDDVGTCKQRGFHPH--PKD-PPLFAASHHVSI-T 408 Query: 291 DAKFDMIDLR 262 D M+DLR Sbjct: 409 DGSVTMLDLR 418
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 120 bits (300), Expect = 5e-27 Identities = 66/131 (50%), Positives = 85/131 (64%), Gaps = 1/131 (0%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 PKQ D C +EEELF +QD+ L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 294 PKQSGGPDYCNTESEEELFLIQDQQGLITLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 353 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPH-KAPLDGSPIYEHCSHVYMN 295 +IAIV +P ++ G F LTD G+ I +C ++GFHPH K P P++ HV + Sbjct: 354 SIAIVCSP--KFQETGFFKLTD-YGMKEIGECRQKGFHPHCKEP----PLFSAGGHVSV- 405 Query: 294 ADAKFDMIDLR 262 + M+DLR Sbjct: 406 TEQDVTMMDLR 416
>STABP_RAT (Q8R424) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 119 bits (299), Expect = 6e-27 Identities = 65/130 (50%), Positives = 82/130 (63%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 P+Q D C NEEE+F +QD L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 302 PRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 361 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPHKAPLDGSPIYEHCSHVYMNA 292 +IAIV +P ++ G F LTD G+ I C ++GFHPH P++ CSHV + Sbjct: 362 SIAIVCSP--KFQETGFFKLTD-YGLQEISTCRQKGFHPHGR---DPPLFCDCSHVTVK- 414 Query: 291 DAKFDMIDLR 262 D + DLR Sbjct: 415 DRIVTITDLR 424
>STABP_MOUSE (Q9CQ26) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 119 bits (299), Expect = 6e-27 Identities = 65/130 (50%), Positives = 82/130 (63%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPE 472 P+Q D C NEEE+F +QD L TLGWIHTHPTQ+ FLSS+DLH H SYQ+MLPE Sbjct: 302 PRQNGGPDYCHTENEEEIFFMQDDLGLLTLGWIHTHPTQTAFLSSVDLHTHCSYQMMLPE 361 Query: 471 AIAIVMAPTDTRKKHGIFHLTDPGGISVIHDCPERGFHPHKAPLDGSPIYEHCSHVYMNA 292 +IAIV +P ++ G F LTD G+ I C ++GFHPH P++ CSHV + Sbjct: 362 SIAIVCSP--KFQETGFFKLTD-YGLQEISTCRQKGFHPHGR---DPPLFCDCSHVTVK- 414 Query: 291 DAKFDMIDLR 262 D + DLR Sbjct: 415 DRIVTITDLR 424
>RPN11_SCHPO (P41878) 26S proteasome regulatory subunit rpn11 (Protein pad1)| Length = 308 Score = 48.1 bits (113), Expect = 2e-05 Identities = 22/71 (30%), Positives = 38/71 (53%) Frame = -3 Query: 645 QKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAI 466 QK+ D + T E+ +GW H+HP C+LSS+D++ S++ + P A+ Sbjct: 91 QKNMMDMLKQTGRPEM----------VVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAV 140 Query: 465 AIVMAPTDTRK 433 A+V+ P + K Sbjct: 141 AVVVDPIQSVK 151
>YPT5_CAEEL (P41883) Hypothetical protein F37A4.5 in chromosome III| Length = 319 Score = 46.6 bits (109), Expect = 6e-05 Identities = 17/44 (38%), Positives = 30/44 (68%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LSS+D++ S++ + P A+A+V+ P + K Sbjct: 107 VGWYHSHPGFGCWLSSVDVNTQQSFEALHPRAVAVVVDPIQSVK 150
>RPN11_YEAST (P43588) 26S proteasome regulatory subunit RPN11 (MPR1 protein)| Length = 306 Score = 44.3 bits (103), Expect = 3e-04 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRKKHGI---FHLTDPGGI 394 +GW H+HP C+LSS+D++ S++ + A+A+V+ P + K + F L D G + Sbjct: 105 VGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>RPN11_CANGA (Q6FKS1) 26S proteasome regulatory subunit RPN11| Length = 306 Score = 43.9 bits (102), Expect = 4e-04 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRKKHGI---FHLTDPGGI 394 +GW H+HP C+LSS+D++ S++ + A+A+V+ P + K + F L D G + Sbjct: 105 VGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGAL 164
>PSDE_MOUSE (O35593) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (MAD1) Length = 310 Score = 42.7 bits (99), Expect = 0.001 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LS +D++ S++ + A+A+V+ P + K Sbjct: 109 VGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
>PSDE_HUMAN (O00487) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome-associated PAD1 homolog 1) Length = 310 Score = 42.7 bits (99), Expect = 0.001 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LS +D++ S++ + A+A+V+ P + K Sbjct: 109 VGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 152
>PSDE_CAEEL (O76577) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 312 Score = 42.7 bits (99), Expect = 0.001 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LS +D++ S++ + A+A+V+ P + K Sbjct: 111 VGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVK 154
>PSDE_DROME (Q9V3H2) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) (26S proteasome regulatory complex subunit p37B) (Yippee-interacting protein 5) Length = 308 Score = 42.7 bits (99), Expect = 0.001 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LS +D++ S++ + A+A+V+ P + K Sbjct: 107 VGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK 150
>PSDE_ARATH (Q9LT08) 26S proteasome non-ATPase regulatory subunit 14 (26S| proteasome regulatory subunit rpn11) Length = 308 Score = 42.4 bits (98), Expect = 0.001 Identities = 15/44 (34%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LS +D++ S++ + A+A+V+ P + K Sbjct: 108 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK 151
>RPN11_ASHGO (Q750E9) 26S proteasome regulatory subunit RPN11| Length = 311 Score = 41.6 bits (96), Expect = 0.002 Identities = 16/44 (36%), Positives = 28/44 (63%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRK 433 +GW H+HP C+LSS+D+ S++ + A+A+V+ P + K Sbjct: 110 VGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVK 153
>CSN5_XENLA (Q6GLM9) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 332 Score = 38.1 bits (87), Expect = 0.023 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 132 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173
>CSN5_XENTR (Q6P635) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 38.1 bits (87), Expect = 0.023 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 134 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 175
>CSN5_BRARE (Q6PC30) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) Length = 334 Score = 38.1 bits (87), Expect = 0.023 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 132 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 173
>CSN5_MOUSE (O35864) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) (Kip1 C-terminus-interacting protein 2) Length = 333 Score = 38.1 bits (87), Expect = 0.023 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 133 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174
>CSN5_HUMAN (Q92905) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (SGN5) (Jun activation domain-binding protein 1) Length = 333 Score = 38.1 bits (87), Expect = 0.023 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 133 IGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFVAVVIDPTRT 174
>CSN5_YARLI (Q6C703) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 354 Score = 37.7 bits (86), Expect = 0.030 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ + Q +A+V+ P T Sbjct: 135 VGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRT 176
>CSN5_USTMA (Q4P804) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 406 Score = 37.7 bits (86), Expect = 0.030 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID++ + Q +AIV+ P T Sbjct: 142 VGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRT 183
>CSN5_CRYNE (Q5KAB0) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 371 Score = 37.4 bits (85), Expect = 0.039 Identities = 18/48 (37%), Positives = 26/48 (54%) Frame = -3 Query: 582 KGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 KG L GW H+HP C+LS ID++ + Q +A+V+ P T Sbjct: 125 KGELLR-GWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRT 171
>CSN5B_ARATH (Q8LAZ7) COP9 signalosome complex subunit 5b (EC 3.4.-.-)| (Signalosome subunit 5b) (Jun activation domain-binding homolog 1) Length = 357 Score = 37.0 bits (84), Expect = 0.051 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 138 VGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVIDPTRT 179
>CSN5_DROME (Q9XZ58) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (Dch5) (JAB1 homolog) Length = 327 Score = 36.6 bits (83), Expect = 0.067 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +AIV+ P T Sbjct: 131 VGWYHSHPGYGCWLSGIDVSTQMLNQTYQEPFVAIVVDPVRT 172
>CSN5A_ARATH (Q9FVU9) COP9 signalosome complex subunit 5a (EC 3.4.-.-)| (Signalosome subunit 5a) (Jun activation domain-binding homolog 2) Length = 358 Score = 36.2 bits (82), Expect = 0.088 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ PT T Sbjct: 138 VGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVIDPTRT 179
>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 299 Score = 36.2 bits (82), Expect = 0.088 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAP 448 +GW H+HP C+LS +D+ Q +A+V+ P Sbjct: 114 IGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDP 152
>CSN5_CANAL (Q59PG6) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 213 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRKK 430 +GW H HP C+L ID+ Q + +AIV+ P T K+ Sbjct: 157 VGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQ 201
>CSN5_CANGA (Q6FT36) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 465 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/47 (34%), Positives = 27/47 (57%) Frame = -3 Query: 588 QDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAP 448 +++ +L +GW H+HP C+LS+ID+ Q +AIV+ P Sbjct: 150 RNEENLNIIGWYHSHPGYDCWLSNIDMQTQSLNQQHQDPYLAIVVDP 196
>CSN5_YEAST (Q12468) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 455 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -3 Query: 573 LFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAP 448 L +GW H+HP C+LS+ID+ Q +AIV+ P Sbjct: 172 LNVVGWFHSHPGYDCWLSNIDIQTQDLNQRFQDPYVAIVVDP 213
>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 340 Score = 35.4 bits (80), Expect = 0.15 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ P T Sbjct: 131 VGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRT 172
>CSN5_NEUCR (Q7RXX8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 336 Score = 35.0 bits (79), Expect = 0.20 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +A+V+ P T Sbjct: 123 IGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRT 164
>CSN5_CAEEL (P91001) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| (Signalosome subunit 5) (JAB1 homolog) Length = 368 Score = 35.0 bits (79), Expect = 0.20 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +AIV+ P T Sbjct: 135 VGWYHSHPGYGCWLSGIDVSTQTLNQKFQEPWVAIVIDPLRT 176
>CSN5_KLULA (Q6CRJ8) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 373 Score = 34.7 bits (78), Expect = 0.25 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAP 448 +GW H+HP C+LS+ID+ Q +AIV+ P Sbjct: 143 VGWYHSHPGYGCWLSNIDIQTQSLNQNYQDPYLAIVVDP 181
>CSN5_DEBHA (Q6BMQ3) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 469 Score = 34.7 bits (78), Expect = 0.25 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q +AIV+ P T Sbjct: 142 VGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKT 183
>CSN5_EMENI (Q5BBF1) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 335 Score = 34.3 bits (77), Expect = 0.33 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q+ P +A+V+ P T Sbjct: 130 VGWYHSHPGYGCWLSGIDVSTQDMQQMSGP-FVAVVIDPERT 170
>CSN5_ASHGO (Q75E19) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 420 Score = 33.9 bits (76), Expect = 0.43 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 Query: 573 LFTLGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAP 448 L +GW H+HP C+LS ID Q +AIV+ P Sbjct: 147 LAIVGWYHSHPGYGCWLSGIDAETQTLNQNFQDPYLAIVVDP 188
>CSN5_ASPFU (Q4WZP2) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 334 Score = 33.1 bits (74), Expect = 0.74 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = -3 Query: 564 LGWIHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDT 439 +GW H+HP C+LS ID+ Q+ P +A+V+ P T Sbjct: 130 VGWYHSHPGYGCWLSGIDVTTQDMQQLGGP-FVAVVIDPERT 170
>BRCC3_HUMAN (P46736) BRCA1/BRCA2-containing complex subunit 3| Length = 316 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -3 Query: 627 SCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVM 481 S +T E L E+ + + +GW H+HP + + S +D+ YQ+M Sbjct: 98 SAASTEAERLAELTGR-PMRVVGWYHSHPHITVWPSHVDVRTQAMYQMM 145
>BRCC3_MOUSE (P46737) BRCA1/BRCA2-containing complex subunit 3| Length = 291 Score = 31.2 bits (69), Expect = 2.8 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = -3 Query: 627 SCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYSYQVM 481 S +T E L E+ + + +GW H+HP + + S +D+ YQ+M Sbjct: 98 SAASTEAERLAELTGR-PMRVVGWYHSHPHITVWPSHVDVRTQAMYQMM 145
>CG11_CANAL (P24866) G1/S-specific cyclin CLN1| Length = 646 Score = 30.8 bits (68), Expect = 3.7 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -3 Query: 651 PKQKSTSDSCEATNEEELFEVQDKGSLFTLGWIHTHPT-QSCFLSSIDLHN 502 P K + C +EE+F + L TL W HPT + C +ID +N Sbjct: 142 PTLKELTIMCRNAYDEEMFVQMEMHILSTLDWSIGHPTLEDCLQLAIDSNN 192
>PRP8_YEAST (P33334) Pre-mRNA-splicing factor 8| Length = 2413 Score = 30.0 bits (66), Expect = 6.3 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 1/77 (1%) Frame = -3 Query: 627 SCEATNEEELFEVQDKGSLFTLGWIHTHPTQSCFLSSIDLHNHYS-YQVMLPEAIAIVMA 451 S + +N ++ ++ D L LGWIHT + F+++ ++ H + + I I + Sbjct: 2235 SVQISNIPDIGDLPDTEGLELLGWIHTQTEELKFMAASEVATHSKLFADKKRDCIDISIF 2294 Query: 450 PTDTRKKHGIFHLTDPG 400 T ++LTD G Sbjct: 2295 STPGSVSLSAYNLTDEG 2311
>ITAL_MOUSE (P24063) Integrin alpha-L precursor (Leukocyte adhesion| glycoprotein LFA-1 alpha chain) (LFA-1A) (Leukocyte function-associated molecule 1 alpha chain) (Lymphocyte antigen Ly-15) (CD11a antigen) Length = 1163 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = -3 Query: 573 LFTLGW---IHTHPTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRKKHGIFH 415 LF W + T PTQS FL+ H+ YQV+ E +V AP + G++H Sbjct: 17 LFAKAWSYNLDTRPTQS-FLAQAG--RHFGYQVLQIEDGVVVGAPGEGDNTGGLYH 69 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,085,714 Number of Sequences: 219361 Number of extensions: 1691878 Number of successful extensions: 3974 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 3878 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3966 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
