Clone Name	rbasd1k15
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|NM_183918.1| Oryza sativa (japonica cultivar-group), predic...	442	e-121
2	dbj|AK068083.1| Oryza sativa (japonica cultivar-group) cDNA clon...	442	e-121
3	dbj|AK102705.1| Oryza sativa (japonica cultivar-group) cDNA clon...	327	3e-86
4	gb|AY104815.1| Zea mays PCO122561 mRNA sequence	317	3e-83
5	ref|NM_189161.1| Oryza sativa (japonica cultivar-group), predic...	293	4e-76
6	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
7	dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic D...	159	1e-35
8	dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic D...	117	5e-23
9	gb|BT012826.1| Lycopersicon esculentum clone 113878R, mRNA sequence	76	2e-10
10	ref|XM_450768.1| Oryza sativa (japonica cultivar-group), mRNA	70	1e-08
11	ref|NM_103774.2| Arabidopsis thaliana unknown protein AT1G48790 ...	64	6e-07
12	gb|AY096591.1| Arabidopsis thaliana unknown protein (At1g48790) ...	64	6e-07
13	gb|AY072212.1| Arabidopsis thaliana unknown protein (At1g48790) ...	64	6e-07
14	emb|BX818439.1|CNS0AEFE Arabidopsis thaliana Full-length cDNA Co...	64	6e-07
15	emb|BX815578.1|CNS0ADZ9 Arabidopsis thaliana Full-length cDNA Co...	64	6e-07
16	gb|AY084581.1| Arabidopsis thaliana clone 112350 mRNA, complete ...	64	6e-07
17	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
18	dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic D...	50	0.009
19	ref|XM_783673.1| PREDICTED: Strongylocentrotus purpuratus simila...	48	0.037
20	gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
21	gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome...	46	0.14
22	gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H...	46	0.14
23	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	46	0.14
24	gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, comp...	46	0.14
25	ref|NM_148342.2| Arabidopsis thaliana unknown protein AT4G16144 ...	44	0.57
26	gb|BT020354.1| Arabidopsis thaliana At4g16144 gene, complete cds	44	0.57
27	gb|AY091160.1| Arabidopsis thaliana At4g16144 mRNA sequence	44	0.57
28	emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA ...	44	0.57
29	emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, ...	44	0.57
30	emb|BX828169.1|CNS0A3WU Arabidopsis thaliana Full-length cDNA Co...	44	0.57
31	emb|BX828082.1|CNS0A2EB Arabidopsis thaliana Full-length cDNA Co...	44	0.57
32	gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome...	42	2.3
33	gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome...	42	2.3
34	emb|CR762476.2| Human DNA sequence from clone DAAP-57C1 on chrom...	42	2.3
35	gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, comp...	42	2.3
36	gb|AY020947.1| Oryza sativa microsatellite MRG3272 containing (T...	40	8.9
37	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	8.9
38	ref|XM_848430.1| PREDICTED: Canis familiaris similar to LPS-resp...	40	8.9
39	ref|XM_862411.1| PREDICTED: Canis familiaris similar to LPS-resp...	40	8.9
40	ref|XM_862393.1| PREDICTED: Canis familiaris similar to LPS-resp...	40	8.9
41	ref|XM_532687.2| PREDICTED: Canis familiaris similar to LPS-resp...	40	8.9
42	gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare str...	40	8.9
43	gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare str...	40	8.9
44	ref|NM_001020200.1| Schizosaccharomyces pombe 972h- hypothetical...	40	8.9
45	tpg|BK001273.1| TPA: TPA_exp: Mycoplasma fermentans strain PG18 ...	40	8.9
46	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	8.9
47	gb|AY168965.1| Mycoplasma fermentans strain PG18 integrative con...	40	8.9
48	gb|AY168964.1| Mycoplasma fermentans strain PG18 integrative con...	40	8.9
49	gb|AY168953.1| Mycoplasma fermentans strain PG18 LicA (licA), an...	40	8.9
50	emb|AL390814.1|SPAC19B12 S.pombe chromosome I cosmid c19B12	40	8.9

---

>ref|NM_183918.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score =  442 bits (223), Expect = e-121
 Identities = 345/388 (88%)
 Strand = Plus / Minus

                                                                        
Query: 266  aggtcaatcatatcaaactttgcatcagcattcatgtacacgtgggagcaatgctcgtag 325
            |||||||||| |||||||||| |||| |  ||||| ||||| |||||||||||||| || 
Sbjct: 1547 aggtcaatcacatcaaactttacatcggggttcatatacacatgggagcaatgctcataa 1488

                                                                        
Query: 326  attggtgagccatccaagggggctttatgtggatggaatcctctctccgggcaatcatgg 385
            |||||||| ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1487 attggtgaaccatctagaggggccttatgaggatggaatcctctctccgggcaatcatgg 1428

                                                                        
Query: 386  atcacactgataccaccaggatccgtcagatgaaatataccatgnnnnnnncttgtgtca 445
            |||||||  ||||| |||||||| |  |||||||||||||||||       |||||||||
Sbjct: 1427 atcacacccataccgccaggatcagagagatgaaatataccatgttttcttcttgtgtca 1368

                                                                        
Query: 446  gtaggtgccataactattgcaattgcctcaggtagcatgacctgataggaataatgatta 505
            |||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||
Sbjct: 1367 gtaggtgccataactattgcaattgcttcaggtaacatcacctgataagaataatgatta 1308

                                                                        
Query: 506  tgaaggtcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaaga 565
            || || ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1307 tggagatcaatggaagacaggaagcaggactgtgttggatgtgtgtgaatccaaccaaga 1248

                                                                        
Query: 566  gtgaatagtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacat 625
            ||||| || ||||||||||||||||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 1247 gtgaaaagcgagcccttgtcctgaacatcaaataattcatcttcatttgtcgcttcacat 1188

                                        
Query: 626  gaatcagatgtagatttctgctttggaa 653
            ||||||||||||||||||||||||||||
Sbjct: 1187 gaatcagatgtagatttctgctttggaa 1160

---

>dbj|AK068083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131J21, full
            insert sequence
          Length = 1931

 Score =  442 bits (223), Expect = e-121
 Identities = 345/388 (88%)
 Strand = Plus / Minus

                                                                        
Query: 266  aggtcaatcatatcaaactttgcatcagcattcatgtacacgtgggagcaatgctcgtag 325
            |||||||||| |||||||||| |||| |  ||||| ||||| |||||||||||||| || 
Sbjct: 1654 aggtcaatcacatcaaactttacatcggggttcatatacacatgggagcaatgctcataa 1595

                                                                        
Query: 326  attggtgagccatccaagggggctttatgtggatggaatcctctctccgggcaatcatgg 385
            |||||||| ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1594 attggtgaaccatctagaggggccttatgaggatggaatcctctctccgggcaatcatgg 1535

                                                                        
Query: 386  atcacactgataccaccaggatccgtcagatgaaatataccatgnnnnnnncttgtgtca 445
            |||||||  ||||| |||||||| |  |||||||||||||||||       |||||||||
Sbjct: 1534 atcacacccataccgccaggatcagagagatgaaatataccatgttttcttcttgtgtca 1475

                                                                        
Query: 446  gtaggtgccataactattgcaattgcctcaggtagcatgacctgataggaataatgatta 505
            |||||||||||||||||||||||||| ||||||| ||| |||||||| ||||||||||||
Sbjct: 1474 gtaggtgccataactattgcaattgcttcaggtaacatcacctgataagaataatgatta 1415

                                                                        
Query: 506  tgaaggtcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaaga 565
            || || ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 1414 tggagatcaatggaagacaggaagcaggactgtgttggatgtgtgtgaatccaaccaaga 1355

                                                                        
Query: 566  gtgaatagtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacat 625
            ||||| || ||||||||||||||||| ||||||| ||| ||||||||||| |||||||||
Sbjct: 1354 gtgaaaagcgagcccttgtcctgaacatcaaataattcatcttcatttgtcgcttcacat 1295

                                        
Query: 626  gaatcagatgtagatttctgctttggaa 653
            ||||||||||||||||||||||||||||
Sbjct: 1294 gaatcagatgtagatttctgctttggaa 1267



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                         
Query: 112  ctctatacacgcaatatagctatgtacaatcacttaaatcagtat 156
            ||||||||| |||| ||||||||||||||||||||| ||| ||||
Sbjct: 1787 ctctatacatgcaa-atagctatgtacaatcacttacatcggtat 1744

---

>dbj|AK102705.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103P11, full
            insert sequence
          Length = 2267

 Score =  327 bits (165), Expect = 3e-86
 Identities = 263/298 (88%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggatggaatcctctctccgggcaatcatggatcacactgataccaccaggatccgtcaga 415
            ||||| ||||| |||||  | |||||||| |||||||  |||||||| ||||||||||||
Sbjct: 1871 ggatgaaatccactctcttgacaatcatgtatcacacccataccacctggatccgtcaga 1812

                                                                        
Query: 416  tgaaatataccatgnnnnnnncttgtgtcagtaggtgccataactattgcaattgcctca 475
            ||||||||||||||        |||| ||||||||||||||||||||||||||||| |||
Sbjct: 1811 tgaaatataccatgctttcttgttgtatcagtaggtgccataactattgcaattgcttca 1752

                                                                        
Query: 476  ggtagcatgacctgataggaataatgattatgaaggtcaatagaagacaggaaacaggac 535
            || ||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| |||| |
Sbjct: 1751 ggaagcatgacctggtatgaatagtgattatgaagatcaatggaagataggaagcaggtc 1692

                                                                        
Query: 536  tgtgttggatgtgtatgaatccaaccaagagtgaatagtgagcccttgtcctgaacttca 595
            ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1691 tgtgttggatgtgtatgaatccaaccaagagtgaaaagtgagcctttgtcctgaacttca 1632

                                                                      
Query: 596  aatagttcttcttcatttgtagcttcacatgaatcagatgtagatttctgctttggaa 653
            |||| |||||||||||||||||||| ||||||||||||||| ||| ||||||| ||||
Sbjct: 1631 aatatttcttcttcatttgtagcttgacatgaatcagatgttgatctctgcttaggaa 1574



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 296  ttcatgtacacgtgggagcaatgctcgtagat 327
            ||||||||||| |||||||||||||| |||||
Sbjct: 1931 ttcatgtacacatgggagcaatgctcatagat 1900

---

>gb|AY104815.1| Zea mays PCO122561 mRNA sequence
          Length = 743

 Score =  317 bits (160), Expect = 3e-83
 Identities = 263/298 (88%), Gaps = 3/298 (1%)
 Strand = Plus / Minus

                                                                       
Query: 356 ggatggaatcctctctccgggcaatcatggatcacactgataccaccaggatccgtcaga 415
           |||||||| ||||||||  | |||||||||||||| |  || ||||| |||||||| |||
Sbjct: 699 ggatggaaacctctctcttgacaatcatggatcacgcccatgccacctggatccgtgaga 640

                                                                       
Query: 416 tgaaatataccatgnnnnnnncttgtgtcagtaggtgccataactattgcaattgcctca 475
           ||||||||||||||       ||||||||||||||||||||||||||||||||||| |||
Sbjct: 639 tgaaatataccatgtttt---cttgtgtcagtaggtgccataactattgcaattgcttca 583

                                                                       
Query: 476 ggtagcatgacctgataggaataatgattatgaaggtcaatagaagacaggaaacaggac 535
           ||||||||||||||||| ||||||||||| || | |||||| ||||| ||||| ||||||
Sbjct: 582 ggtagcatgacctgataagaataatgattgtggacgtcaatggaagaaaggaagcaggac 523

                                                                       
Query: 536 tgtgttggatgtgtatgaatccaaccaagagtgaatagtgagcccttgtcctgaacttca 595
           ||||||||||||||||||||||||||||| ||||| | ||||    ||||||||||||||
Sbjct: 522 tgtgttggatgtgtatgaatccaaccaagtgtgaacaatgagtatgtgtcctgaacttca 463

                                                                     
Query: 596 aatagttcttcttcatttgtagcttcacatgaatcagatgtagatttctgctttggaa 653
           ||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||
Sbjct: 462 aatagttcttcttcatttgtagcttcacacgtatcagatgtcgatttctgctttggaa 405

---

>ref|NM_189161.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1626

 Score =  293 bits (148), Expect = 4e-76
 Identities = 234/265 (88%)
 Strand = Plus / Minus

                                                                        
Query: 356  ggatggaatcctctctccgggcaatcatggatcacactgataccaccaggatccgtcaga 415
            ||||| ||||| |||||  | |||||||| |||||||  |||||||| ||||||||||||
Sbjct: 1523 ggatgaaatccactctcttgacaatcatgtatcacacccataccacctggatccgtcaga 1464

                                                                        
Query: 416  tgaaatataccatgnnnnnnncttgtgtcagtaggtgccataactattgcaattgcctca 475
            ||||||||||||||        |||| ||||||||||||||||||||||||||||| |||
Sbjct: 1463 tgaaatataccatgctttcttgttgtatcagtaggtgccataactattgcaattgcttca 1404

                                                                        
Query: 476  ggtagcatgacctgataggaataatgattatgaaggtcaatagaagacaggaaacaggac 535
            || ||||||||||| || ||||| ||||||||||| ||||| ||||| ||||| |||| |
Sbjct: 1403 ggaagcatgacctggtatgaatagtgattatgaagatcaatggaagataggaagcaggtc 1344

                                                                        
Query: 536  tgtgttggatgtgtatgaatccaaccaagagtgaatagtgagcccttgtcctgaacttca 595
            ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 1343 tgtgttggatgtgtatgaatccaaccaagagtgaaaagtgagcctttgtcctgaacttca 1284

                                     
Query: 596  aatagttcttcttcatttgtagctt 620
            |||| ||||||||||||||||||||
Sbjct: 1283 aatatttcttcttcatttgtagctt 1259



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 296  ttcatgtacacgtgggagcaatgctcgtagat 327
            ||||||||||| |||||||||||||| |||||
Sbjct: 1583 ttcatgtacacatgggagcaatgctcatagat 1552

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  159 bits (80), Expect = 1e-35
 Identities = 143/164 (87%)
 Strand = Plus / Minus

                                                                            
Query: 266      aggtcaatcatatcaaactttgcatcagcattcatgtacacgtgggagcaatgctcgtag 325
                |||||||||| |||||||||| |||| |  ||||| ||||| |||||||||||||| || 
Sbjct: 13287854 aggtcaatcacatcaaactttacatcggggttcatatacacatgggagcaatgctcataa 13287795

                                                                            
Query: 326      attggtgagccatccaagggggctttatgtggatggaatcctctctccgggcaatcatgg 385
                |||||||| ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 13287794 attggtgaaccatctagaggggccttatgaggatggaatcctctctccgggcaatcatgg 13287735

                                                            
Query: 386      atcacactgataccaccaggatccgtcagatgaaatataccatg 429
                |||||||  ||||| |||||||| |  |||||||||||||||||
Sbjct: 13287734 atcacacccataccgccaggatcagagagatgaaatataccatg 13287691



 Score =  117 bits (59), Expect = 5e-23
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                            
Query: 550      atgaatccaaccaagagtgaatagtgagcccttgtcctgaacttcaaatagttcttcttc 609
                ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 17209971 atgaatccaaccaagagtgaaaagtgagcctttgtcctgaacttcaaatatttcttcttc 17210030

                           
Query: 610      atttgtagctt 620
                |||||||||||
Sbjct: 17210031 atttgtagctt 17210041



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                            
Query: 551      tgaatccaaccaagagtgaatagtgagcccttgtcctgaacttcaaatagttcttcttca 610
                |||||||||||||||||||| || ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 13284376 tgaatccaaccaagagtgaaaagcgagcccttgtcctgaacatcaaataattcatcttca 13284317

                              
Query: 611      tttgtagcttcaca 624
                ||||| ||||||||
Sbjct: 13284316 tttgtcgcttcaca 13284303



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                            
Query: 485      acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
                |||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||
Sbjct: 13285443 acctgataagaataatgattatggagatcaatggaagacaggaagcaggactgtgttgga 13285384

                     
Query: 545      tgtgt 549
                |||||
Sbjct: 13285383 tgtgt 13285379



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                     
Query: 437      cttgtgtcagtaggtgccataactattgcaattgcctcaggtagcatgacctg 489
                ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 13286975 cttgtgtcagtaggtgccataactattgcaattgcttcaggtaacatcacctg 13286923



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                   
Query: 438      ttgtgtcagtaggtgccataactattgcaattgcctcaggtagcatgacct 488
                |||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 17208489 ttgtatcagtaggtgccataactattgcaattgcttcaggaagcatgacct 17208539



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                            
Query: 356      ggatggaatcctctctccgggcaatcatggatcacactgataccaccaggatccgtcaga 415
                ||||| ||||| |||||  | |||||||| |||||||  |||||||| ||||||||||||
Sbjct: 17206760 ggatgaaatccactctcttgacaatcatgtatcacacccataccacctggatccgtcaga 17206819

                              
Query: 416      tgaaatataccatg 429
                ||||||||||||||
Sbjct: 17206820 tgaaatataccatg 17206833



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                            
Query: 485      acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
                ||||| || ||||| ||||||||||| ||||| ||||| ||||| |||| ||||||||||
Sbjct: 17209319 acctggtatgaatagtgattatgaagatcaatggaagataggaagcaggtctgtgttgga 17209378

                     
Query: 545      tgtgt 549
                |||||
Sbjct: 17209379 tgtgt 17209383



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                             
Query: 625      tgaatcagatgtagatttctgctttggaa 653
                |||||||||||||||||||||||||||||
Sbjct: 13284157 tgaatcagatgtagatttctgctttggaa 13284129



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 112      ctctatacacgcaatatagctatgtacaatcacttaaatcagtat 156
                ||||||||| |||| ||||||||||||||||||||| ||| ||||
Sbjct: 13287987 ctctatacatgcaa-atagctatgtacaatcacttacatcggtat 13287944



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 296      ttcatgtacacgtgggagcaatgctcgtagat 327
                ||||||||||| |||||||||||||| |||||
Sbjct: 17206700 ttcatgtacacatgggagcaatgctcatagat 17206731

---

>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088D01
          Length = 146144

 Score =  159 bits (80), Expect = 1e-35
 Identities = 143/164 (87%)
 Strand = Plus / Minus

                                                                         
Query: 266   aggtcaatcatatcaaactttgcatcagcattcatgtacacgtgggagcaatgctcgtag 325
             |||||||||| |||||||||| |||| |  ||||| ||||| |||||||||||||| || 
Sbjct: 28212 aggtcaatcacatcaaactttacatcggggttcatatacacatgggagcaatgctcataa 28153

                                                                         
Query: 326   attggtgagccatccaagggggctttatgtggatggaatcctctctccgggcaatcatgg 385
             |||||||| ||||| |  ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 28152 attggtgaaccatctagaggggccttatgaggatggaatcctctctccgggcaatcatgg 28093

                                                         
Query: 386   atcacactgataccaccaggatccgtcagatgaaatataccatg 429
             |||||||  ||||| |||||||| |  |||||||||||||||||
Sbjct: 28092 atcacacccataccgccaggatcagagagatgaaatataccatg 28049



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Minus

                                                                         
Query: 551   tgaatccaaccaagagtgaatagtgagcccttgtcctgaacttcaaatagttcttcttca 610
             |||||||||||||||||||| || ||||||||||||||||| ||||||| ||| ||||||
Sbjct: 24734 tgaatccaaccaagagtgaaaagcgagcccttgtcctgaacatcaaataattcatcttca 24675

                           
Query: 611   tttgtagcttcaca 624
             ||||| ||||||||
Sbjct: 24674 tttgtcgcttcaca 24661



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                         
Query: 485   acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
             |||||||| |||||||||||||| || ||||| ||||||||||| |||||||||||||||
Sbjct: 25801 acctgataagaataatgattatggagatcaatggaagacaggaagcaggactgtgttgga 25742

                  
Query: 545   tgtgt 549
             |||||
Sbjct: 25741 tgtgt 25737



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 50/53 (94%)
 Strand = Plus / Minus

                                                                  
Query: 437   cttgtgtcagtaggtgccataactattgcaattgcctcaggtagcatgacctg 489
             ||||||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 27333 cttgtgtcagtaggtgccataactattgcaattgcttcaggtaacatcacctg 27281



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                          
Query: 625   tgaatcagatgtagatttctgctttggaa 653
             |||||||||||||||||||||||||||||
Sbjct: 24515 tgaatcagatgtagatttctgctttggaa 24487



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                          
Query: 112   ctctatacacgcaatatagctatgtacaatcacttaaatcagtat 156
             ||||||||| |||| ||||||||||||||||||||| ||| ||||
Sbjct: 28345 ctctatacatgcaa-atagctatgtacaatcacttacatcggtat 28302

---

>dbj|AP004224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1111E11
          Length = 152835

 Score =  117 bits (59), Expect = 5e-23
 Identities = 68/71 (95%)
 Strand = Plus / Plus

                                                                          
Query: 550    atgaatccaaccaagagtgaatagtgagcccttgtcctgaacttcaaatagttcttcttc 609
              ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||
Sbjct: 122927 atgaatccaaccaagagtgaaaagtgagcctttgtcctgaacttcaaatatttcttcttc 122986

                         
Query: 610    atttgtagctt 620
              |||||||||||
Sbjct: 122987 atttgtagctt 122997



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                 
Query: 438    ttgtgtcagtaggtgccataactattgcaattgcctcaggtagcatgacct 488
              |||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 121445 ttgtatcagtaggtgccataactattgcaattgcttcaggaagcatgacct 121495



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                          
Query: 356    ggatggaatcctctctccgggcaatcatggatcacactgataccaccaggatccgtcaga 415
              ||||| ||||| |||||  | |||||||| |||||||  |||||||| ||||||||||||
Sbjct: 119716 ggatgaaatccactctcttgacaatcatgtatcacacccataccacctggatccgtcaga 119775

                            
Query: 416    tgaaatataccatg 429
              ||||||||||||||
Sbjct: 119776 tgaaatataccatg 119789



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                          
Query: 485    acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
              ||||| || ||||| ||||||||||| ||||| ||||| ||||| |||| ||||||||||
Sbjct: 122275 acctggtatgaatagtgattatgaagatcaatggaagataggaagcaggtctgtgttgga 122334

                   
Query: 545    tgtgt 549
              |||||
Sbjct: 122335 tgtgt 122339



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 296    ttcatgtacacgtgggagcaatgctcgtagat 327
              ||||||||||| |||||||||||||| |||||
Sbjct: 119656 ttcatgtacacatgggagcaatgctcatagat 119687

---

>gb|BT012826.1| Lycopersicon esculentum clone 113878R, mRNA sequence
          Length = 2004

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 161/202 (79%)
 Strand = Plus / Minus

                                                                        
Query: 452  gccataactattgcaattgcctcaggtagcatgacctgataggaataatgattatgaagg 511
            ||||| || ||||||||||| ||||| | ||| | |||||| ||||| ||| | ||||  
Sbjct: 1543 gccattacaattgcaattgcttcaggcaacataatctgatatgaatactgagtgtgaaca 1484

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            || || || |||| |||||| || || || ||||||||||||||||| |||||||  || 
Sbjct: 1483 tcgatggatgacatgaaacatgattgcgtcggatgtgtatgaatccatccaagaggaaac 1424

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            | |||   ||| || ||||||||||||| ||| || |||||||||| || ||| ||||| 
Sbjct: 1423 aatgattgcttatcttgaacttcaaatatttcctcctcatttgtagtttgacacgaatct 1364

                                  
Query: 632  gatgtagatttctgctttggaa 653
            ||||| |||| |||||| ||||
Sbjct: 1363 gatgtcgattcctgcttaggaa 1342

---

>ref|XM_450768.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1365

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 65/75 (86%)
 Strand = Plus / Minus

                                                                        
Query: 487  ctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttggatg 546
            ||||| ||| ||||||||||| || |||| |||||||| ||| ||   ||||||||||||
Sbjct: 1149 ctgattggagtaatgattatggagatcaacagaagacatgaagcactcctgtgttggatg 1090

                           
Query: 547  tgtatgaatccaacc 561
            |||||||||||||||
Sbjct: 1089 tgtatgaatccaacc 1075



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 601  ttcttcttcatttgtagcttcacatgaatcagatgtagatttctgctttggaa 653
            |||||||||||||||||| ||||  |||| |  ||| |||| |||||||||||
Sbjct: 1032 ttcttcttcatttgtagcctcacgcgaataacttgttgattcctgctttggaa 980

---

>ref|NM_103774.2| Arabidopsis thaliana unknown protein AT1G48790 mRNA, complete cds
          Length = 1969

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 1501 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 1442

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 1441 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 1382

                                
Query: 632  gatgtagatttctgctttgg 651
            ||||| |||| |||||||||
Sbjct: 1381 gatgtcgattcctgctttgg 1362

---

>gb|AY096591.1| Arabidopsis thaliana unknown protein (At1g48790) mRNA, complete cds
          Length = 1555

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 1271 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 1212

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 1211 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 1152

                                
Query: 632  gatgtagatttctgctttgg 651
            ||||| |||| |||||||||
Sbjct: 1151 gatgtcgattcctgctttgg 1132

---

>gb|AY072212.1| Arabidopsis thaliana unknown protein (At1g48790) mRNA, complete cds
          Length = 1914

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 1429 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 1370

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 1369 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 1310

                                
Query: 632  gatgtagatttctgctttgg 651
            ||||| |||| |||||||||
Sbjct: 1309 gatgtcgattcctgctttgg 1290

---

>emb|BX818439.1|CNS0AEFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZB03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 688

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 512 tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
           ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 238 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 179

                                                                       
Query: 572 agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
           || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 178 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 119

                               
Query: 632 gatgtagatttctgctttgg 651
           ||||| |||| |||||||||
Sbjct: 118 gatgtcgattcctgctttgg 99

---

>emb|BX815578.1|CNS0ADZ9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZF11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1902

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 1396 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 1337

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 1336 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 1277

                                
Query: 632  gatgtagatttctgctttgg 651
            ||||| |||| |||||||||
Sbjct: 1276 gatgtcgattcctgctttgg 1257

---

>gb|AY084581.1| Arabidopsis thaliana clone 112350 mRNA, complete sequence
          Length = 1877

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                        
Query: 512  tcaatagaagacaggaaacaggactgtgttggatgtgtatgaatccaaccaagagtgaat 571
            ||||| || |||| |||||| |||||||| ||||| ||||||||||| || || | ||| 
Sbjct: 1505 tcaatggatgacatgaaacaagactgtgtcggatgcgtatgaatccatccgagtgggaaa 1446

                                                                        
Query: 572  agtgagcccttgtcctgaacttcaaatagttcttcttcatttgtagcttcacatgaatca 631
            || ||   ||||||||| ||||||||||  |||||||| || || || | ||| || |||
Sbjct: 1445 agggattgcttgtcctgtacttcaaatatctcttcttcgttcgtggcctgacacgagtca 1386

                                
Query: 632  gatgtagatttctgctttgg 651
            ||||| |||| |||||||||
Sbjct: 1385 gatgtcgattcctgctttgg 1366

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 485      acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
                ||||||| ||| ||||||||||| || |||| |||||||| ||| ||   ||||||||||
Sbjct: 12671969 acctgattggagtaatgattatggagatcaacagaagacatgaagcactcctgtgttgga 12671910

                     
Query: 545      tgtgt 549
                |||||
Sbjct: 12671909 tgtgt 12671905

---

>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0041C07
          Length = 179047

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                          
Query: 485    acctgataggaataatgattatgaaggtcaatagaagacaggaaacaggactgtgttgga 544
              ||||||| ||| ||||||||||| || |||| |||||||| ||| ||   ||||||||||
Sbjct: 137907 acctgattggagtaatgattatggagatcaacagaagacatgaagcactcctgtgttgga 137848

                   
Query: 545    tgtgt 549
              |||||
Sbjct: 137847 tgtgt 137843

---

>ref|XM_783673.1| PREDICTED: Strongylocentrotus purpuratus similar to CG2224-PA
            (LOC583779), mRNA
          Length = 1585

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 542  ggatgtgtatgaatccaaccaagagtga 569
            |||||||||||||||||||| |||||||
Sbjct: 1314 ggatgtgtatgaatccaacccagagtga 1287

---

>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11,
              complete sequence
          Length = 133352

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 153    gtatccacaattcttcactgcac 175
              |||||||||||||||||||||||
Sbjct: 109075 gtatccacaattcttcactgcac 109097

---

>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09,
            complete sequence
          Length = 94399

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 153  gtatccacaattcttcactgcac 175
            |||||||||||||||||||||||
Sbjct: 1654 gtatccacaattcttcactgcac 1676

---

>gb|AC026475.6|AC026475 Homo sapiens chromosome 16 clone RP11-71H23, complete sequence
          Length = 159611

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 187   aaggcagcaatttgttcaactgc 209
             |||||||||||||||||||||||
Sbjct: 27525 aaggcagcaatttgttcaactgc 27547

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 153      gtatccacaattcttcactgcac 175
                |||||||||||||||||||||||
Sbjct: 26084314 gtatccacaattcttcactgcac 26084336

---

>gb|AC016647.7| Homo sapiens chromosome 16 clone RP11-89G14, complete sequence
          Length = 160358

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 187   aaggcagcaatttgttcaactgc 209
             |||||||||||||||||||||||
Sbjct: 62799 aaggcagcaatttgttcaactgc 62777

---

>ref|NM_148342.2| Arabidopsis thaliana unknown protein AT4G16144 mRNA, complete cds
          Length = 1937

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  acgtgggagcaatgctcgtagattgg 330
            ||||| ||||||||||||||||||||
Sbjct: 1627 acgtgtgagcaatgctcgtagattgg 1602

---

>gb|BT020354.1| Arabidopsis thaliana At4g16144 gene, complete cds
          Length = 1524

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  acgtgggagcaatgctcgtagattgg 330
            ||||| ||||||||||||||||||||
Sbjct: 1478 acgtgtgagcaatgctcgtagattgg 1453

---

>gb|AY091160.1| Arabidopsis thaliana At4g16144 mRNA sequence
          Length = 1943

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  acgtgggagcaatgctcgtagattgg 330
            ||||| ||||||||||||||||||||
Sbjct: 1617 acgtgtgagcaatgctcgtagattgg 1592

---

>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5
          Length = 209164

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 305    acgtgggagcaatgctcgtagattgg 330
              ||||| ||||||||||||||||||||
Sbjct: 104755 acgtgtgagcaatgctcgtagattgg 104780

---

>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43
          Length = 198226

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 305   acgtgggagcaatgctcgtagattgg 330
             ||||| ||||||||||||||||||||
Sbjct: 73745 acgtgtgagcaatgctcgtagattgg 73770

---

>emb|BX828169.1|CNS0A3WU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH5ZB05 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1760

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  acgtgggagcaatgctcgtagattgg 330
            ||||| ||||||||||||||||||||
Sbjct: 1616 acgtgtgagcaatgctcgtagattgg 1591

---

>emb|BX828082.1|CNS0A2EB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH50ZC11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1826

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  acgtgggagcaatgctcgtagattgg 330
            ||||| ||||||||||||||||||||
Sbjct: 1569 acgtgtgagcaatgctcgtagattgg 1544

---

>gb|AC124482.3| Mus musculus BAC clone RP24-120B3 from chromosome 14, complete sequence
          Length = 165934

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 276   tatcaaactttgcatcagcattcat 300
             ||||||||||||| |||||||||||
Sbjct: 82760 tatcaaactttgcttcagcattcat 82784

---

>gb|AC154580.2| Mus musculus BAC clone RP23-380H1 from chromosome 14, complete sequence
          Length = 187377

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 276    tatcaaactttgcatcagcattcat 300
              ||||||||||||| |||||||||||
Sbjct: 174532 tatcaaactttgcttcagcattcat 174556

---

>emb|CR762476.2| Human DNA sequence from clone DAAP-57C1 on chromosome 6, complete
             sequence
          Length = 95554

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 604   ttcttcatttgtagcttcaca 624
             |||||||||||||||||||||
Sbjct: 13102 ttcttcatttgtagcttcaca 13122

---

>gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, complete sequence
          Length = 202074

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 536   tgtgttggatgtgtatgaatc 556
             |||||||||||||||||||||
Sbjct: 41683 tgtgttggatgtgtatgaatc 41703

---

>gb|AY020947.1| Oryza sativa microsatellite MRG3272 containing (TA)X16, closest to
           marker R1862, genomic sequence
          Length = 232

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 594 caaatagttcttcttcattt 613
           ||||||||||||||||||||
Sbjct: 145 caaatagttcttcttcattt 164

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 594      caaatagttcttcttcattt 613
                ||||||||||||||||||||
Sbjct: 11261941 caaatagttcttcttcattt 11261960

---

>ref|XM_848430.1| PREDICTED: Canis familiaris similar to LPS-responsive vesicle
            trafficking, beach and anchor containing, transcript
            variant 2 (LOC475463), mRNA
          Length = 8696

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 136  tacaatcacttaaatcagtatcca 159
            |||||| |||||||||||||||||
Sbjct: 6709 tacaatgacttaaatcagtatcca 6732

---

>ref|XM_862411.1| PREDICTED: Canis familiaris similar to LPS-responsive vesicle
           trafficking, beach and anchor containing, transcript
           variant 5 (LOC475463), mRNA
          Length = 2399

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 136 tacaatcacttaaatcagtatcca 159
           |||||| |||||||||||||||||
Sbjct: 412 tacaatgacttaaatcagtatcca 435

---

>ref|XM_862393.1| PREDICTED: Canis familiaris similar to LPS-responsive vesicle
           trafficking, beach and anchor containing, transcript
           variant 3 (LOC475463), mRNA
          Length = 2547

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 136 tacaatcacttaaatcagtatcca 159
           |||||| |||||||||||||||||
Sbjct: 560 tacaatgacttaaatcagtatcca 583

---

>ref|XM_532687.2| PREDICTED: Canis familiaris similar to LPS-responsive vesicle
            trafficking, beach and anchor containing, transcript
            variant 1 (LOC475463), mRNA
          Length = 9649

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 136  tacaatcacttaaatcagtatcca 159
            |||||| |||||||||||||||||
Sbjct: 6676 tacaatgacttaaatcagtatcca 6699

---

>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAb0085H08, from chromosome 3, complete sequence
          Length = 130656

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 594   caaatagttcttcttcattt 613
             ||||||||||||||||||||
Sbjct: 40894 caaatagttcttcttcattt 40913

---

>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0085H08, from chromosome 3, complete sequence
          Length = 126708

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 594   caaatagttcttcttcattt 613
             ||||||||||||||||||||
Sbjct: 19107 caaatagttcttcttcattt 19088

---

>ref|NM_001020200.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC19B12.10),
            partial mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 452  gccataactattgcaattgcctcaggtagcat 483
            |||||||| |||||||| || |||||||||||
Sbjct: 1121 gccataacaattgcaatagcttcaggtagcat 1090

---

>tpg|BK001273.1| TPA: TPA_exp: Mycoplasma fermentans strain PG18 composite integrative
             conjugal element ICEF-II, partial sequence
          Length = 17111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   agcaatttgttcaactgccg 211
             ||||||||||||||||||||
Sbjct: 14000 agcaatttgttcaactgccg 13981

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 594      caaatagttcttcttcattt 613
                ||||||||||||||||||||
Sbjct: 11258704 caaatagttcttcttcattt 11258723

---

>gb|AY168965.1| Mycoplasma fermentans strain PG18 integrative conjugal element
            ICEF-II internal fragment N5, partial sequence
          Length = 4332

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  agcaatttgttcaactgccg 211
            ||||||||||||||||||||
Sbjct: 1221 agcaatttgttcaactgccg 1202

---

>gb|AY168964.1| Mycoplasma fermentans strain PG18 integrative conjugal element
            ICEF-II internal fragment N4, partial sequence
          Length = 5644

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 192  agcaatttgttcaactgccg 211
            ||||||||||||||||||||
Sbjct: 5307 agcaatttgttcaactgccg 5288

---

>gb|AY168953.1| Mycoplasma fermentans strain PG18 LicA (licA), and LepA (lepA),
             complete cds; insertion sequence ISMi1, partial sequence;
             integrative conjugal element ICEF-IA, complete sequence
          Length = 27891

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   agcaatttgttcaactgccg 211
             ||||||||||||||||||||
Sbjct: 17536 agcaatttgttcaactgccg 17517

---

>emb|AL390814.1|SPAC19B12 S.pombe chromosome I cosmid c19B12
          Length = 30858

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 452   gccataactattgcaattgcctcaggtagcat 483
             |||||||| |||||||| || |||||||||||
Sbjct: 26690 gccataacaattgcaatagcttcaggtagcat 26659


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,680,933
Number of Sequences: 3902068
Number of extensions: 4680933
Number of successful extensions: 82216
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81968
Number of HSP's gapped (non-prelim): 245
length of query: 653
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 630
effective length of database: 17,143,297,704
effective search space: 10800277553520
effective search space used: 10800277553520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---