Clone Name | rbasd1k14 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | RL24_AQUPY (Q9ZI41) 50S ribosomal protein L24 | 32 | 1.7 | 2 | RL24_AQUAE (O67569) 50S ribosomal protein L24 | 31 | 2.2 |
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>RL24_AQUPY (Q9ZI41) 50S ribosomal protein L24| Length = 131 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +3 Query: 339 ENIINLINFLMRISNNVNECNK*TGYFHGFVVLE*GN*HRRQSYCHKCN 485 E I++ N ++ N CNK T GF ++E GN R+ YC KCN Sbjct: 75 EGPIDISNVMLLCPN----CNKPTRV--GFRIVEEGNVRRKYRYCKKCN 117
>RL24_AQUAE (O67569) 50S ribosomal protein L24| Length = 132 Score = 31.2 bits (69), Expect = 2.2 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = +3 Query: 339 ENIINLINFLMRISNNVNECNK*TGYFHGFVVLE*GN*HRRQSYCHKCN 485 E I++ N ++ N CNK T GF ++E GN R+ YC KCN Sbjct: 76 EGPIDISNVMLICPN----CNKPTRV--GFRIVEEGNVRRKYRYCKKCN 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,047,988 Number of Sequences: 219361 Number of extensions: 1302781 Number of successful extensions: 1887 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1887 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)