ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1k04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1241 bits (626), Expect = 0.0 Identities = 671/680 (98%), Gaps = 5/680 (0%) Strand = Plus / Minus Query: 1 tattaacaaaacatgcccagcaatcgcttggntgcgatgcggncttag-gtaggtaaaac 59 ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||| Sbjct: 1672 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttagtgtaggtaaaac 1613 Query: 60 atcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgt-cgtcgctcc 118 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1612 atcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgttcgtcgctcc 1554 Query: 119 ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggca-cgggcaaa 177 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1553 ttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcatcgggcaaa 1494 Query: 178 gtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgt-gtatgg 236 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1493 gtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgttgtatgg 1434 Query: 237 agaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccaga 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 agaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccaga 1374 Query: 297 gctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctgg 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1373 gctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctgg 1314 Query: 357 acgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1313 acgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtc 1254 Query: 417 acgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccg 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1253 acgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccg 1194 Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 1134 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 1133 gattgtcctgggaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtc 1074 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 1014 Query: 657 tccatacgaccatcacggat 676 |||||||||||||||||||| Sbjct: 1013 tccatacgaccatcacggat 994
>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase precursor RNA, partial cds; nuclear gene for chloroplast product Length = 850 Score = 1031 bits (520), Expect = 0.0 Identities = 644/682 (94%), Gaps = 8/682 (1%) Strand = Plus / Minus Query: 1 tattaacaaaacatgcccagcaatcgcttggntgcgatgcggn-cttaggta-----ggt 54 ||||||||||||||||||||||||||||||| |||||||||| |||||||| | | Sbjct: 743 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaaggat 684 Query: 55 aaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcg 114 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 683 aaaacatcag-atattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtca 626 Query: 115 ctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggc 174 ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || ||| Sbjct: 625 ctcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacaggc 566 Query: 175 aaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtat 234 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 aaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgtat 506 Query: 235 ggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcaccca 294 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 505 ggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcaccca 446 Query: 295 gagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcct 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 445 gagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcct 386 Query: 355 ggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaagg 414 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 385 ggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaagg 326 Query: 415 tcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagc 474 |||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 325 tcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtagagg 266 Query: 475 cgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaa 534 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 265 tcacccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcga 206 Query: 535 tggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcgg 594 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 205 tggattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcgg 146 Query: 595 tctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaact 654 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 145 tctggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaact 86 Query: 655 tctccatacgaccatcacggat 676 |||||||||||||||||||||| Sbjct: 85 tctccatacgaccatcacggat 64
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 1031 bits (520), Expect = 0.0 Identities = 644/682 (94%), Gaps = 8/682 (1%) Strand = Plus / Minus Query: 1 tattaacaaaacatgcccagcaatcgcttggntgcgatgcggn-cttaggta-----ggt 54 ||||||||||||||||||||||||||||||| |||||||||| |||||||| | | Sbjct: 1593 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggtacttaggtacaaaggat 1534 Query: 55 aaaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcg 114 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1533 aaaacatcag-atattaaat-tggcatgcttaaaaggtgtaaaggcagctgccgtcgtca 1476 Query: 115 ctccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggc 174 ||||| |||||||||||| ||||||||||| | ||||||||||| ||| |||| || ||| Sbjct: 1475 ctcctcgccgttgggtcgaagttcttggcagtctggtcggtgcatcctgccggtacaggc 1416 Query: 175 aaagtaccttgctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtat 234 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1415 aaagtaccttgctgtgcccctttacctcctcctatgcagcaagagatggtgggtgtgtat 1356 Query: 235 ggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcaccca 294 ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1355 ggagaatgttctaaccgtagaaggtaccagtcttcatcgcatcctggttagcatcaccca 1296 Query: 295 gagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcct 354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 gagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcct 1236 Query: 355 ggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaagg 414 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1235 ggacgagcatgtgcccgtactctagcagcttctccactgtcatctttggctgctcaaagg 1176 Query: 415 tcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagc 474 |||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 1175 tcactggtccgtcccgcgagttcaccagcttcttgccaatgttctcgataccggtagagg 1116 Query: 475 cgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaa 534 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1115 tcacccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccgaaaaagtcga 1056 Query: 535 tggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcgg 594 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 1055 tggattgtcctgggaaggtgtcgacgatcttgacgacggactcgtcgctgacattgtcgg 996 Query: 595 tctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaact 654 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 995 tctggaagatacccttgcagacaccgatacggtcgtcgcgggtgggagcccagtagaact 936 Query: 655 tctccatacgaccatcacggat 676 |||||||||||||||||||||| Sbjct: 935 tctccatacgaccatcacggat 914
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 835 bits (421), Expect = 0.0 Identities = 427/429 (99%) Strand = Plus / Minus Query: 248 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1167 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 1108 Query: 308 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1107 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 1048 Query: 368 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1047 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 988 Query: 428 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 987 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 928 Query: 488 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 868 Query: 548 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 607 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct: 867 gaaggtgtcgacgatctttacgacagactcgtcacagacattgtcggtctggaagatacc 808 Query: 608 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 748 Query: 668 atcacggat 676 ||||||||| Sbjct: 747 atcacggat 739 Score = 369 bits (186), Expect = 8e-99 Identities = 197/200 (98%), Gaps = 1/200 (0%) Strand = Plus / Minus Query: 1 tattaacaaaacatgcccagcaatcgcttggntgcgatgcggncttaggtaggtaaaaca 60 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1363 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaaca 1304 Query: 61 tcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1303 tcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 1245 Query: 121 gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1244 gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 1185 Query: 181 ccttgctgtgctcctttacc 200 |||||||||||||||||||| Sbjct: 1184 ccttgctgtgctcctttacc 1165
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 825 bits (416), Expect = 0.0 Identities = 608/671 (90%), Gaps = 8/671 (1%) Strand = Plus / Minus Query: 12 catgcccagcaatcgcttggntgcgatgcgg-ncttaggta-----ggtaaaacatcagn 65 ||||||||||| ||||||| |||||||||| |||||||| || ||||||||| Sbjct: 1593 catgcccagcagtcgcttgtatgcgatgcggtgcttaggtacaaagagtgaaacatcaga 1534 Query: 66 atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgt 125 ||| | |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 1533 ataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgcggt 1474 Query: 126 tgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagtaccttg 185 ||||||| |||||||||||| ||||||| |||||||||||||| |||||||| ||||| Sbjct: 1473 tgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggcaaagtgccttg 1414 Query: 186 ctgtgctcctttacctcctcctatgcagcaagagatggtgggtgtgtatggagaattttc 245 |||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||| Sbjct: 1413 ttgtgctcctttacctcctcctatgcagcaagagatggtgg--gtgtatgaagagtgttc 1356 Query: 246 taaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctgg 305 |||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| Sbjct: 1355 taaccgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctgg 1296 Query: 306 ctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatg 365 |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1295 ctcatgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatg 1236 Query: 366 tgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccg 425 || |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 1235 tggccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccg 1176 Query: 426 tcccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttg 485 |||||||||||||||||||||||||| |||||||| |||||||| || ||||||||| Sbjct: 1175 tcccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttg 1116 Query: 486 cgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcct 545 ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||| Sbjct: 1115 cgcacctcaacgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcct 1056 Query: 546 gggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagata 605 ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 1055 gggaangtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagata 996 Query: 606 cccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacga 665 ||||||||||| ||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 995 cccttgcagacgccgatacggtcctcgcgggtgggcgcccagtagaacttctccatacga 936 Query: 666 ccatcacggat 676 || |||||||| Sbjct: 935 ccgtcacggat 925
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 664 bits (335), Expect = 0.0 Identities = 335/335 (100%) Strand = Plus / Minus Query: 198 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7355 acctcctcctatgcagcaagagatggtgggtgtgtatggagaattttctaaccgtagaag 7296 Query: 258 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 317 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7295 gaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgtaggtg 7236 Query: 318 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7235 tcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactct 7176 Query: 378 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7175 agcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttc 7116 Query: 438 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7115 accagcctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcg 7056 Query: 498 tcgtacacccgagcacgcagagcaccgaaaaagtc 532 ||||||||||||||||||||||||||||||||||| Sbjct: 7055 tcgtacacccgagcacgcagagcaccgaaaaagtc 7021 Score = 373 bits (188), Expect = e-100 Identities = 199/202 (98%), Gaps = 1/202 (0%) Strand = Plus / Minus Query: 1 tattaacaaaacatgcccagcaatcgcttggntgcgatgcggncttaggtaggtaaaaca 60 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 7723 tattaacaaaacatgcccagcaatcgcttggatgcgatgcggacttaggtaggtaaaaca 7664 Query: 61 tcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 120 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7663 tcag-atattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctt 7605 Query: 121 gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7604 gccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggcaaagta 7545 Query: 181 ccttgctgtgctcctttacctc 202 |||||||||||||||||||||| Sbjct: 7544 ccttgctgtgctcctttacctc 7523 Score = 287 bits (145), Expect = 2e-74 Identities = 145/145 (100%) Strand = Plus / Minus Query: 532 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6880 caatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgt 6821 Query: 592 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6820 cggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtaga 6761 Query: 652 acttctccatacgaccatcacggat 676 ||||||||||||||||||||||||| Sbjct: 6760 acttctccatacgaccatcacggat 6736 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Minus Query: 473 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 532 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 3812 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 3753 Query: 533 aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 592 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 3752 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 3693 Query: 593 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 652 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 3692 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 3633 Query: 653 cttctccatacgaccatcacggat 676 ||||||||| || || |||||||| Sbjct: 3632 cttctccatgcgcccgtcacggat 3609 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 324 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 383 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 3961 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 3902 Query: 384 ttctcgactgtcatctttggctgctcgaa 412 ||||| | |||||||| ||||| ||||| Sbjct: 3901 ttctctatggtcatcttgggctggtcgaa 3873
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 579 bits (292), Expect = e-162 Identities = 388/420 (92%) Strand = Plus / Minus Query: 248 accgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggct 307 |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| Sbjct: 1363 accgtagaaggaaccagtcttcatggcatccttgttcgcatcacccagagctgcctggct 1304 Query: 308 catgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtg 367 |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1303 catgtaagtgtccgcaagctgcacacgcttgacattgtcctgctcctggacaagcatgtg 1244 Query: 368 cccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtc 427 |||||||| |||| |||||| || |||||||| |||||||||||||| ||||| ||||| Sbjct: 1243 gccgtactccagcaacttctccaccgtcatcttgggctgctcgaaggtgacgggtccgtc 1184 Query: 428 ccgcgagttcaccagcctcttgccaatgttctcgattccggtagagccgacccacttgcg 487 |||||||||||||||||||||||| |||||||| |||||||| || ||||||||||| Sbjct: 1183 ccgcgagttcaccagcctcttgccgatgttctcaattccggtggacgacacccacttgcg 1124 Query: 488 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 547 |||||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1123 cacctcgtcgtcgtacacccgagcacgcagagcaccgaagaagtcgatggactgtcctgg 1064 Query: 548 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 607 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct: 1063 gaaggtgtcgacgatcttgacgacagactcgtcgctgacgttgtcggtctggaagatacc 1004 Query: 608 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 667 ||||||||| ||||||||||| || |||||||| |||||||| ||||||||||||||||| Sbjct: 1003 cttgcagacgccgatacggtcctcgcgggtgggcgcccagtaaaacttctccatacgacc 944 Score = 180 bits (91), Expect = 4e-42 Identities = 131/145 (90%) Strand = Plus / Minus Query: 56 aaacatcagnatattaaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 115 |||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1505 aaacatcanaataattaaagtggcatgcttaaaaggtgtaaaggcagctgccgtcgtcgc 1446 Query: 116 tccttgccgttgggtcgtagttcttggcattttggtcggtgcaaccttccggcacgggca 175 |||| || ||||||||| |||||||||||| ||||||| |||||||||||||| |||| Sbjct: 1445 tcctcgcggttgggtcgaagttcttggcatcccggtcggtacaaccttccggcacaggca 1386 Query: 176 aagtaccttgctgtgctcctttacc 200 |||| ||||| |||||||||||||| Sbjct: 1385 aagtgccttgttgtgctcctttacc 1361
>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco activase (rba1 gene) Length = 321 Score = 521 bits (263), Expect = e-145 Identities = 296/307 (96%) Strand = Plus / Minus Query: 226 ggtgtgtatggagaattttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 285 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 ggtgtgtatggagaatgttctaaccgtagaaggaaccagtcttcatcgcatcctggttag 249 Query: 286 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 catcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgacattgt 189 Query: 346 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 cctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctttggct 129 Query: 406 gctcgaaggtcacgggcccgtcccgcgagttcaccagcctcttgccaatgttctcgattc 465 |||| |||||||| || ||||||||||||||||| ||| ||||||||||||||||||| | Sbjct: 128 gctcaaaggtcactggtccgtcccgcgagttcacaagcttcttgccaatgttctcgatac 69 Query: 466 cggtagagccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccga 525 |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 68 cggtagaggtcacccacttgcgcacctcgtcgtcgtacacccgagcacgcagagcaccga 9 Query: 526 aaaagtc 532 ||||||| Sbjct: 8 aaaagtc 2
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1086 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1027 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1026 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 967 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 966 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 907 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 906 tccatacgcccgtcacggat 887 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1520 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1461 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 1460 ggcaacagggtcggtgcaaccttccggcacaggca 1426 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1316 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1257 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1256 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1197 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1196 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1137 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1136 ccctcgagttcaccagcctcttgccaatgttctc 1103
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1081 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1022 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1021 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 962 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 961 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 902 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 901 tccatacgcccgtcacggat 882 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1430 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1371 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 1370 ggcaacagggtcggtgcaaccttccggcacaggca 1336 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 249 ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 308 ||||||||||||||||||||||| || || |||||| ||||| ||||| |||| |||| Sbjct: 1309 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1250 Query: 309 atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 368 | ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1249 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1190 Query: 369 ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 428 |||||||| | ||||| |||| |||||||| ||||||||||| | || || ||| Sbjct: 1189 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1130 Query: 429 cgcgagttcaccagcctcttgccaatgttctc 460 | |||||||||||||||||||||||||||||| Sbjct: 1129 ctcgagttcaccagcctcttgccaatgttctc 1098
>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA, partial cds; nuclear gene for chloroplast product Length = 651 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 335 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 276 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 275 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 216 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 215 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 156 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 155 tccatacgcccgtcacggat 136 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 565 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 506 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 505 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 446 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 445 atccgtactcgatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 386 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 385 ccctcgagttcaccagcctcttgccaatgttctc 352
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1129 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1070 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1069 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1010 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 1009 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 950 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 949 tccatacgcccgtcacggat 930 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1359 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1300 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1299 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1240 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1239 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1180 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1179 ccctcgagttcaccagcctcttgccaatgttctc 1146 Score = 119 bits (60), Expect = 1e-23 Identities = 114/130 (87%), Gaps = 4/130 (3%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||| Sbjct: 1562 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcg-aattctt 1504 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1503 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1444 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1443 ccctcctcct 1434
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1080 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1021 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1020 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 961 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 960 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 901 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 900 tccatacgcccgtcacggat 881 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1514 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1455 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1454 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1395 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1394 ccctcctcct 1385 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1310 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1251 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1250 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1191 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1190 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1131 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1130 ccctcgagttcaccagcctcttgccaatgttctc 1097
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1118 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1059 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1058 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 999 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 998 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 939 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 938 tccatacgcccgtcacggat 919 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1552 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1493 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1492 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1433 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1432 ccctcctcct 1423 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1348 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1289 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1288 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1229 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1228 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1169 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1168 ccctcgagttcaccagcctcttgccaatgttctc 1135
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1117 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1058 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1057 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 998 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 997 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 938 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 937 tccatacgcccgtcacggat 918 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1551 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1492 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1491 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1432 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1431 ccctcctcct 1422 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1347 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1288 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1287 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1228 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1227 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1168 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1167 ccctcgagttcaccagcctcttgccaatgttctc 1134
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 901 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 842 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 841 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 782 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 781 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 722 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 721 tccatacgcccgtcacggat 702 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1335 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1276 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1275 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1216 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1215 ccctcctcct 1206 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1131 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1072 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1071 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1012 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1011 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 952 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 951 ccctcgagttcaccagcctcttgccaatgttctc 918
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1122 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1063 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1062 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 1003 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 1002 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 943 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 942 tccatacgcccgtcacggat 923 Score = 135 bits (68), Expect = 2e-28 Identities = 115/130 (88%), Gaps = 3/130 (2%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1556 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1497 Query: 141 ggcattttggtcggtgcaaccttccggcacgggcaaagtac---cttgctgtgctccttt 197 |||| |||||||||||||||||||||| |||| ||| ||||||||||||||| Sbjct: 1496 ggcaacagggtcggtgcaaccttccggcacaggcaggttacctgcttgctgtgctccttg 1437 Query: 198 acctcctcct 207 ||||||||| Sbjct: 1436 ccctcctcct 1427 Score = 123 bits (62), Expect = 8e-25 Identities = 176/214 (82%) Strand = Plus / Minus Query: 247 aaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggc 306 ||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| || Sbjct: 1352 aaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgc 1293 Query: 307 tcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgt 366 ||| ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1292 tcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgt 1233 Query: 367 gcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgt 426 |||||||| | ||||| |||| |||||||| ||||||||||| | || || | Sbjct: 1232 atccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccct 1173 Query: 427 cccgcgagttcaccagcctcttgccaatgttctc 460 ||| |||||||||||||||||||||||||||||| Sbjct: 1172 ccctcgagttcaccagcctcttgccaatgttctc 1139
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 190 bits (96), Expect = 4e-45 Identities = 174/200 (87%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| || || ||| Sbjct: 1116 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaagaaatcgatg 1057 Query: 537 gattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtc 596 ||||| ||||||||| |||||||||||||||||| |||||| ||| |||||||| Sbjct: 1056 gattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcggtg 997 Query: 597 tggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttc 656 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct: 996 cggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaacttc 937 Query: 657 tccatacgaccatcacggat 676 |||||||| || |||||||| Sbjct: 936 tccatacgcccgtcacggat 917 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 1465 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 1406 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 1405 ggcaacagggtcggtgcaaccttccggcacaggca 1371 Score = 119 bits (60), Expect = 1e-23 Identities = 174/212 (82%) Strand = Plus / Minus Query: 249 ccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctc 308 ||||||||||||||||||||||| || || |||||| ||||| ||||| |||| |||| Sbjct: 1344 ccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcctcgctc 1285 Query: 309 atgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgc 368 | ||| ||||| ||||||||||||||||| || |||||||||| || ||||||| Sbjct: 1284 aagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagcatgtat 1225 Query: 369 ccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcc 428 |||||||| | ||||| |||| |||||||| ||||||||||| | || || ||| Sbjct: 1224 ccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggccctcc 1165 Query: 429 cgcgagttcaccagcctcttgccaatgttctc 460 | |||||||||||||||||||||||||||||| Sbjct: 1164 ctcgagttcaccagcctcttgccaatgttctc 1133
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 170 bits (86), Expect = 4e-39 Identities = 275/338 (81%) Strand = Plus / Minus Query: 324 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 383 |||||||| ||||| || || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1242 agctgcacgcgcttcacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1183 Query: 384 ttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgcgagttcaccagc 443 ||||||| |||||||| ||||| ||||| ||| ||||| |||| ||||| || ||| Sbjct: 1182 ttctcgatggtcatcttgggctggtcgaacgtcggcggcccctccctggagttgacgagc 1123 Query: 444 ctcttgccaatgttctcgattccggtagagccgacccacttgcgcacctcatcgtcgtac 503 | |||| |||||||||| ||| | ||||||||||||||||||||| ||||||||| Sbjct: 1122 cgcttggagatgttctcgacgccgatctcgccgacccacttgcgcacctcgtcgtcgtac 1063 Query: 504 acccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatc 563 ||||| || ||||| || ||||| ||||| ||||| || || ||||||||||| || | | Sbjct: 1062 acccgcgcccgcagcgcgccgaagaagtcgatggactgccccgggaaggtgtccaccagc 1003 Query: 564 ttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcagacaccgata 623 | || || | |||||| ||| |||||||| ||||||| |||||||| || ||||| Sbjct: 1002 ctcaccacggcctcgtcggggacgttgtcggtgcggaagatgcccttgcacacgccgatg 943 Query: 624 cggtcgtcacgggtgggagcccagtagaacttctccat 661 ||||| || |||||||| |||||||||||||||||||| Sbjct: 942 cggtcctcccgggtgggcgcccagtagaacttctccat 905
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 534 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 593 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 108688 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 108747 Query: 594 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 653 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 108748 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 108807 Query: 654 ttctccatacgaccatcacggat 676 ||||||||||| || |||||||| Sbjct: 108808 ttctccatacgcccgtcacggat 108830 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 107158 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 107217 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 107218 ggcaacagggtcggtgcaaccttccggcacaggca 107252 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 244 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 303 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 108306 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 108365 Query: 304 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 363 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 108366 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 108425 Query: 364 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 423 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 108426 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 108485 Query: 424 cgtcccgcgagttcaccagcctcttgccaatgttctc 460 | |||| |||||||||||||||||||||||||||||| Sbjct: 108486 cctccctcgagttcaccagcctcttgccaatgttctc 108522 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 112456 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 112515 Query: 658 ccat 661 |||| Sbjct: 112516 ccat 112519 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 99 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 158 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 112053 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 112112 Query: 159 accttccggcacggg 173 || |||||||||| Sbjct: 112113 tcccgccggcacggg 112127 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 526 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 108539 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 108588 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 432 gagttcaccagcctcttgccaatgttctc 460 ||||||||||||||| |||| |||||||| Sbjct: 112324 gagttcaccagcctcctgccgatgttctc 112352
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 534 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 593 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 30565 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 30624 Query: 594 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 653 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 30625 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 30684 Query: 654 ttctccatacgaccatcacggat 676 ||||||||||| || |||||||| Sbjct: 30685 ttctccatacgcccgtcacggat 30707 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 29039 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 29098 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 29099 ggcaacagggtcggtgcaaccttccggcacaggca 29133 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 244 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 303 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 30183 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 30242 Query: 304 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 363 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 30243 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 30302 Query: 364 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 423 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 30303 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 30362 Query: 424 cgtcccgcgagttcaccagcctcttgccaatgttctc 460 | |||| |||||||||||||||||||||||||||||| Sbjct: 30363 cctccctcgagttcaccagcctcttgccaatgttctc 30399 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 34333 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 34392 Query: 658 ccat 661 |||| Sbjct: 34393 ccat 34396 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 99 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 158 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 33930 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 33989 Query: 159 accttccggcacggg 173 || |||||||||| Sbjct: 33990 tcccgccggcacggg 34004 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 526 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 30416 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 30465 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 432 gagttcaccagcctcttgccaatgttctc 460 ||||||||||||||| |||| |||||||| Sbjct: 34201 gagttcaccagcctcctgccgatgttctc 34229
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 534 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 593 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 28303827 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28303886 Query: 594 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 653 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 28303887 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28303946 Query: 654 ttctccatacgaccatcacggat 676 ||||||||||| || |||||||| Sbjct: 28303947 ttctccatacgcccgtcacggat 28303969 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28302301 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28302360 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 28302361 ggcaacagggtcggtgcaaccttccggcacaggca 28302395 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 244 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 303 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 28303445 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28303504 Query: 304 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 363 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 28303505 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28303564 Query: 364 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 423 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 28303565 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28303624 Query: 424 cgtcccgcgagttcaccagcctcttgccaatgttctc 460 | |||| |||||||||||||||||||||||||||||| Sbjct: 28303625 cctccctcgagttcaccagcctcttgccaatgttctc 28303661 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 28307595 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28307654 Query: 658 ccat 661 |||| Sbjct: 28307655 ccat 28307658 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 99 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 158 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28307192 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28307251 Query: 159 accttccggcacggg 173 || |||||||||| Sbjct: 28307252 tcccgccggcacggg 28307266 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 526 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 28303678 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28303727 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 432 gagttcaccagcctcttgccaatgttctc 460 ||||||||||||||| |||| |||||||| Sbjct: 28307463 gagttcaccagcctcctgccgatgttctc 28307491
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 149 bits (75), Expect = 1e-32 Identities = 126/143 (88%) Strand = Plus / Plus Query: 534 atggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcg 593 |||||||| ||||||||| |||||||||||||||||| |||||| ||| |||||| Sbjct: 28286276 atggattggcctgggaagctgtcgacgatcttgacgatgtcctcgtcggggacgttgtcg 28286335 Query: 594 gtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaac 653 || ||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 28286336 gtgcggaagatacccttgcagacgccgacacggtcgtcgcgggtgggagcccagtagaac 28286395 Query: 654 ttctccatacgaccatcacggat 676 ||||||||||| || |||||||| Sbjct: 28286396 ttctccatacgcccgtcacggat 28286418 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Plus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 28284750 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 28284809 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 28284810 ggcaacagggtcggtgcaaccttccggcacaggca 28284844 Score = 129 bits (65), Expect = 1e-26 Identities = 179/217 (82%) Strand = Plus / Plus Query: 244 tctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcct 303 |||||||||||||||||||||||||||| || || |||||| ||||| ||||| |||| Sbjct: 28285894 tctaaccgtagaaggaaccagtcttcatggcgtcggagttagcgtcaccaagagcagcct 28285953 Query: 304 ggctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagca 363 ||||| ||| ||||| ||||||||||||||||| || |||||||||| || |||| Sbjct: 28285954 cgctcaagtactgctcagccagctgcacacgcttgacgttctcctgctccttcacaagca 28286013 Query: 364 tgtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcc 423 ||| |||||||| | ||||| |||| |||||||| ||||||||||| | || | Sbjct: 28286014 tgtatccgtactccatgagcttttcgatcgtcatcttgggctgctcgaactccggtgggc 28286073 Query: 424 cgtcccgcgagttcaccagcctcttgccaatgttctc 460 | |||| |||||||||||||||||||||||||||||| Sbjct: 28286074 cctccctcgagttcaccagcctcttgccaatgttctc 28286110 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| ||| |||| || || || ||||| || ||||||||||||||||||||||| | Sbjct: 28290044 ggaagatgcccctgcacacgccaatgcggtcctcgcgggtgggagcccagtagaacttgt 28290103 Query: 658 ccat 661 |||| Sbjct: 28290104 ccat 28290107 Score = 54.0 bits (27), Expect = 6e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 99 gcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttggtcggtgca 158 ||||||||||||||||||||| || || ||||||||||| ||| |||||||||||| Sbjct: 28289641 gcagctgccgtcgtcgctcctggcggtagggtcgtagttggcggcgcgttggtcggtgca 28289700 Query: 159 accttccggcacggg 173 || |||||||||| Sbjct: 28289701 tcccgccggcacggg 28289715 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaa 526 ||||||||||||||||| |||||||| || || ||||| ||||| ||||| Sbjct: 28286127 acccacttgcgcacctcgtcgtcgtaaacacgggcacgaagagcgccgaa 28286176 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 432 gagttcaccagcctcttgccaatgttctc 460 ||||||||||||||| |||| |||||||| Sbjct: 28289912 gagttcaccagcctcctgccgatgttctc 28289940
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 135 bits (68), Expect = 2e-28 Identities = 170/204 (83%) Strand = Plus / Minus Query: 473 gccgacccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtc 532 ||||||||||||||||||||| |||||||||||||| || ||||| || ||||| ||||| Sbjct: 1243 gccgacccacttgcgcacctcgtcgtcgtacacccgtgcccgcagcgcgccgaagaagtc 1184 Query: 533 aatggattgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtc 592 ||||| || || ||||||||||| || | | | || || | |||||| ||| ||||| Sbjct: 1183 gatggactgccccgggaaggtgtccaccagcctcaccacggcctcgtccgggacgttgtc 1124 Query: 593 ggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaa 652 ||| ||||||| |||||||| || ||||| ||||| || |||||||| ||||||||||| Sbjct: 1123 ggtgcggaagatgcccttgcacacgccgatgcggtcctcgcgggtgggcgcccagtagaa 1064 Query: 653 cttctccatacgaccatcacggat 676 ||||||||| || || |||||||| Sbjct: 1063 cttctccatgcgcccgtcacggat 1040 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 324 agctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagc 383 ||||||||||||||||| || |||||||||||||| |||||||| |||||||| | ||| Sbjct: 1392 agctgcacacgcttgacgttctcctgctcctggaccagcatgtggccgtactccatgagc 1333 Query: 384 ttctcgactgtcatctttggctgctcgaa 412 ||||| | |||||||| ||||| ||||| Sbjct: 1332 ttctctatggtcatcttgggctggtcgaa 1304
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 131 bits (66), Expect = 3e-27 Identities = 135/158 (85%) Strand = Plus / Minus Query: 519 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgacgacagactcg 578 |||||||| || ||||| ||||| || |||||||||||||||| |||||| || || Sbjct: 1164 gcaccgaagaaatcaatagattggccagggaaggtgtcgacgagcttgacaacgtggtcc 1105 Query: 579 tcactgacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtg 638 ||| |||||||||||| ||||||||| || |||||||||||||| ||||||||| Sbjct: 1104 tcaggaacattgtcggtcctgaagataccggtggcaacaccgatacggtcctcacgggtg 1045 Query: 639 ggagcccagtagaacttctccatacgaccatcacggat 676 |||||||||||||||||||||||||||||||||||||| Sbjct: 1044 ggagcccagtagaacttctccatacgaccatcacggat 1007
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 125 bits (63), Expect = 2e-25 Identities = 171/207 (82%) Strand = Plus / Minus Query: 245 ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 304 |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1007 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 948 Query: 305 gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 364 ||||| ||| |||| || |||||||| | ||| || || ||||||||||| || ||||| Sbjct: 947 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcat 888 Query: 365 gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 424 || |||||||| |||||||| || | |||||||| |||||| |||| ||| ||||| Sbjct: 887 gttgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 828 Query: 425 gtcccgcgagttcaccagcctcttgcc 451 ||| |||||||||||||||||||||| Sbjct: 827 ctccagcgagttcaccagcctcttgcc 801 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Minus Query: 479 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 538 |||||| | |||||| |||||||| |||| || | ||| |||||||| ||||||||||| Sbjct: 773 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 714 Query: 539 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 598 ||| || |||||||||||||||| ||||| |||| ||| | ||| ||||||| | Sbjct: 713 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 654 Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| ||||||| |||| ||||| || | |||||||||||||||||||||||| Sbjct: 653 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 594 Query: 659 catacgaccatcacggat 676 ||||||||| |||||||| Sbjct: 593 catacgaccgtcacggat 576 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 91 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 150 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1149 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1090 Query: 151 tcggtgcaaccttc 164 ||||| |||||||| Sbjct: 1089 tcggtacaaccttc 1076
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 1074 catacgtccatcacggat 1057
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1134 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1075 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 1074 catacgtccatcacggat 1057
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 1103 catacgtccatcacggat 1086
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 985 catacgtccatcacggat 968
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 960 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 901 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 900 catacgtccatcacggat 883
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 14154 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 14213 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 14214 catacgtccatcacggat 14231
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 988 catacgtccatcacggat 971
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1037 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 978 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 977 catacgtccatcacggat 960
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1045 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 986 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 985 catacgtccatcacggat 968
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1048 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 989 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 988 catacgtccatcacggat 971
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Minus Query: 479 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 538 |||||| | |||||| |||||||| |||| || | ||| |||||||| ||||||||||| Sbjct: 1074 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 1015 Query: 539 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 598 ||| || |||||||||||||||| ||||| |||| ||| | ||| ||||||| | Sbjct: 1014 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 955 Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| ||||||| |||| ||||| || | |||||||||||||||||||||||| Sbjct: 954 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 895 Query: 659 catacgaccatcacggat 676 ||||||||| |||||||| Sbjct: 894 catacgaccgtcacggat 877 Score = 103 bits (52), Expect = 7e-19 Identities = 166/204 (81%) Strand = Plus / Minus Query: 245 ctaaccgtagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctg 304 |||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| Sbjct: 1308 ctaaccatagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctc 1249 Query: 305 gctcatgtaggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcat 364 ||||| ||| |||| || |||||||| | ||| || || ||||| ||||| || ||||| Sbjct: 1248 gctcaggtacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcat 1189 Query: 365 gtgcccgtactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggccc 424 | |||||||| |||||||| || | |||||||| |||||| |||| ||| ||||| Sbjct: 1188 attgccgtactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggccc 1129 Query: 425 gtcccgcgagttcaccagcctctt 448 ||| ||||||||||||||||||| Sbjct: 1128 ctccagcgagttcaccagcctctt 1105 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 91 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 150 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1450 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1391 Query: 151 tcggtgcaaccttc 164 ||||| |||||||| Sbjct: 1390 tcggtacaaccttc 1377
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Minus Query: 479 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 538 |||||| | |||||| |||||||| |||| || | ||| |||||||| ||||||||||| Sbjct: 937 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 878 Query: 539 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 598 ||| || |||||||||||||||| ||||| |||| ||| | ||| ||||||| | Sbjct: 877 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 818 Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| ||||||| |||| ||||| || | |||||||||||||||||||||||| Sbjct: 817 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 758 Query: 659 catacgaccatcacggat 676 ||||||||| |||||||| Sbjct: 757 catacgaccgtcacggat 740 Score = 97.6 bits (49), Expect = 5e-17 Identities = 160/197 (81%) Strand = Plus / Minus Query: 252 tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 311 |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| | Sbjct: 1164 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1105 Query: 312 taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 371 || |||| || |||||||| | ||| || || ||||| ||||| || ||||| | ||| Sbjct: 1104 tacttgtcggccagctgcaccctcttcacgttctcctgttcctgcaccagcatattgccg 1045 Query: 372 tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 431 ||||| |||||||| || | |||||||| |||||| |||| ||| ||||| ||| || Sbjct: 1044 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 985 Query: 432 gagttcaccagcctctt 448 ||||||||||||||||| Sbjct: 984 gagttcaccagcctctt 968 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 91 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 150 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1275 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1216 Query: 151 tcggtgcaaccttc 164 ||||| |||||||| Sbjct: 1215 tcggtacaaccttc 1202
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 123 bits (62), Expect = 8e-25 Identities = 164/198 (82%) Strand = Plus / Minus Query: 479 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 538 |||||| | |||||| |||||||| |||| || | ||| |||||||| ||||||||||| Sbjct: 967 ccacttcctcacctcgtcgtcgtagaccctcgccctcagtgcaccgaagaagtcaatgga 908 Query: 539 ttgtcctgggaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctg 598 ||| || |||||||||||||||| ||||| |||| ||| | ||| ||||||| | Sbjct: 907 ttggccggggaaggtgtcgacgagcttgatgacatcctccttggggacgttgtcggacct 848 Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| ||||||| |||| ||||| || | |||||||||||||||||||||||| Sbjct: 847 gaagataccggtgcagacgccgacccggtcatccctggtgggagcccagtagaacttctc 788 Query: 659 catacgaccatcacggat 676 ||||||||| |||||||| Sbjct: 787 catacgaccgtcacggat 770 Score = 119 bits (60), Expect = 1e-23 Identities = 165/200 (82%) Strand = Plus / Minus Query: 252 tagaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatg 311 |||||||| |||||||| ||||| ||||| || || ||||| |||||||||| ||||| | Sbjct: 1194 tagaaggatccagtcttgatcgcgtcctgattggcgtcaccaagagctgcctcgctcagg 1135 Query: 312 taggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccg 371 || |||| || |||||||| | ||| || || ||||||||||| || ||||||| ||| Sbjct: 1134 tacttgtcggccagctgcaccctcttcacgttctcctgctcctgcaccagcatgttgccg 1075 Query: 372 tactctagcagcttctcgactgtcatctttggctgctcgaaggtcacgggcccgtcccgc 431 ||||| |||||||| || | |||||||| |||||| |||| ||| ||||| ||| || Sbjct: 1074 tactccagcagcttgtccagggtcatcttgggctgcgcgaacgtcggcggcccctccagc 1015 Query: 432 gagttcaccagcctcttgcc 451 |||||||||||||||||||| Sbjct: 1014 gagttcaccagcctcttgcc 995 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 91 gtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcattttgg 150 ||||| ||||||||||| ||||||||||| ||||| |||||| |||| ||||||| || Sbjct: 1305 gtgtacaggcagctgccatcgtcgctcctggccgtcgggtcgaagttggtggcattccgg 1246 Query: 151 tcggtgcaaccttc 164 ||||| |||||||| Sbjct: 1245 tcggtacaaccttc 1232
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 1163 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 1104 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 1103 catacgtccatcacggat 1086
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 123 bits (62), Expect = 8e-25 Identities = 74/78 (94%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 |||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||| Sbjct: 3129 gaagatacccttgcagacaccgatacggtcttcacgggtcggggcccagtagaacttctc 3070 Query: 659 catacgaccatcacggat 676 |||||| ||||||||||| Sbjct: 3069 catacgtccatcacggat 3052
>gb|DQ359157.1| Oryza sativa (japonica cultivar-group) chloroplast RuBisCO small isoform precursor, mRNA, partial cds; nuclear gene for chloroplast product Length = 93 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 87 aaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttcttggcatt 146 ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 93 aaaggtgtaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttcttggcaac 34 Query: 147 ttggtcggtgcaaccttccggcacgggca 175 |||||||||||||||||||||| |||| Sbjct: 33 agggtcggtgcaaccttccggcacaggca 5
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 113 bits (57), Expect = 8e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 612 cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 671 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2813 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 2754 Query: 672 cggat 676 ||||| Sbjct: 2753 cggat 2749
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 113 bits (57), Expect = 8e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 612 cagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatca 671 |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1185 cagacaccaatacggtcctcacgggtgggagcccagtagaacttctccatacgaccatca 1126 Query: 672 cggat 676 ||||| Sbjct: 1125 cggat 1121 Score = 44.1 bits (22), Expect = 0.59 Identities = 58/70 (82%) Strand = Plus / Minus Query: 492 tcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaag 551 ||||||||||| || ||||| | || || ||||||||||| || |||||||| |||||| Sbjct: 1305 tcatcgtcgtatacacgagccctcaacgctccgaaaaagtcgatagattgtccagggaag 1246 Query: 552 gtgtcgacga 561 | ||| |||| Sbjct: 1245 gcgtcaacga 1236
>gb|DQ023668.1| Oryza sativa (indica cultivar-group) cultivar Tetep genomic sequence Length = 234 Score = 101 bits (51), Expect = 3e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 |||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 135 tgcttaaaagttttaaaggcagctgccgtcgtcgctcctcgccgttgggtcgaagttctt 76 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||| |||||||||||||| |||| Sbjct: 75 ggcaacagggtcgggtcaaccttccggcacaggca 41
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 97.6 bits (49), Expect = 5e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 489 acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 548 ||||| |||||||| ||||| |||||||| || ||||| ||||| ||||| || || ||| Sbjct: 683 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaagtcgatggactggccaggg 624 Query: 549 aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 608 ||||||||||| | || |||||| ||| || ||| |||||| ||||||| ||| Sbjct: 623 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 564 Query: 609 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 661 |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 563 ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 511 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 253 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 312 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 919 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 860 Query: 313 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 372 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 859 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 800 Query: 373 actctagcagcttctcgactgtcatctttggctgctcgaa 412 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 799 actccaagagcttctcgatcgttatcttgggctgctcgaa 760
>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase activase (Rca) gene, partial sequence Length = 648 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Minus Query: 584 gacattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagc 643 ||||||||| ||| ||||||||| |||| ||||| |||||||| ||||| ||||| || Sbjct: 248 gacattgtcagtcctgaagataccagtgcaaacaccaatacggtcctcacgagtgggtgc 189 Query: 644 ccagtagaacttctccatacgaccatcacggat 676 ||||||||| ||||||||||||||||||||||| Sbjct: 188 ccagtagaatttctccatacgaccatcacggat 156
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 585 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 644 |||||||| ||| ||| ||||||||||||||||| |||||||| || | ||| |||||| Sbjct: 1043 acattgtcagtcctgaaaatacccttgcagacaccaatacggtcttccctggtaggagcc 984 Query: 645 cagtagaacttctccatacgaccatcacggat 676 |||||||| || |||||||||||||||||||| Sbjct: 983 cagtagaatttttccatacgaccatcacggat 952 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 273 gcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagc 322 |||||||||||||||||||| || || |||| |||||||| ||||||| Sbjct: 1355 gcatcctggttagcatcaccaagggcagcctcactcatgtacttgtcagc 1306
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 253 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 312 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255 Query: 313 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 372 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195 Query: 373 actctagcagcttctcgactgtcatctttggctgctcgaa 412 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155 Score = 89.7 bits (45), Expect = 1e-14 Identities = 141/173 (81%) Strand = Plus / Minus Query: 489 acctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctggg 548 ||||| |||||||| ||||| |||||||| || ||||| || || ||||| || || ||| Sbjct: 1078 acctcgtcgtcgtagacccgggcacgcagcgcgccgaagaaatcgatggactggccaggg 1019 Query: 549 aaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagataccc 608 ||||||||||| | || |||||| ||| || ||| |||||| ||||||| ||| Sbjct: 1018 aaggtgtcgaccagctggacgacgtgctcctcgtcgacgccgtcggtgcggaagatgccc 959 Query: 609 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 661 |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| Sbjct: 958 ttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttctccat 906
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 95.6 bits (48), Expect = 2e-16 Identities = 132/160 (82%) Strand = Plus / Minus Query: 253 agaaggaaccagtcttcatcgcatcctggttagcatcacccagagctgcctggctcatgt 312 ||||||| ||||||||||| || |||| ||| || ||||| ||||| |||| | | | || Sbjct: 1314 agaaggagccagtcttcatggcgtcctcgttggcttcaccaagagcagcctcgttgaggt 1255 Query: 313 aggtgtcagcaagctgcacacgcttgacattgtcctgctcctggacgagcatgtgcccgt 372 | ||||||||||||||||||||||||| || ||||||||| || |||||||| |||| Sbjct: 1254 acttgtcagcaagctgcacacgcttgacgttctcctgctccgccaccagcatgtgtccgt 1195 Query: 373 actctagcagcttctcgactgtcatctttggctgctcgaa 412 |||| | |||||||||| || ||||| ||||||||||| Sbjct: 1194 actccaagagcttctcgatcgttatcttgggctgctcgaa 1155 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| ||||||||||| ||||| ||||| || |||||||| |||||||||||||||| Sbjct: 969 ggaagatgcccttgcagacgccgatgcggtcctcgcgggtgggcgcccagtagaacttct 910 Query: 658 ccat 661 |||| Sbjct: 909 ccat 906
>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase (pTA1.1) Length = 1011 Score = 89.7 bits (45), Expect = 1e-14 Identities = 153/189 (80%) Strand = Plus / Minus Query: 488 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 547 ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| || Sbjct: 462 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 403 Query: 548 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 607 |||||| ||||| ||||| || |||| || ||| || ||||||||| ||| ||||| Sbjct: 402 gaaggtatcgacaatctttacaacagcttcctcaggcacgttgtcggtcctgaaaatacc 343 Query: 608 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 667 |||||| ||||| || | || || | || || ||||| |||||||||||||||||||| Sbjct: 342 cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgacc 283 Query: 668 atcacggat 676 ||||||||| Sbjct: 282 atcacggat 274
>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence Length = 253 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 610 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 669 |||||||||| ||||| ||||| ||||| || ||||||||||| |||||||||||||||| Sbjct: 143 tgcagacaccaatacgatcgtcgcgggttggtgcccagtagaatttctccatacgaccat 84 Query: 670 cacggat 676 ||||||| Sbjct: 83 cacggat 77
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 85.7 bits (43), Expect = 2e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 495 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 554 |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| | Sbjct: 618 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 559 Query: 555 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 614 ||||||| || |||||| |||||| ||| |||||| ||||||| |||||||| Sbjct: 558 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 499 Query: 615 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 661 || ||||| |||||||| |||||||| |||||||||||||| ||||| Sbjct: 498 acgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgtccat 452
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 85.7 bits (43), Expect = 2e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 610 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 669 ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||| | Sbjct: 1034 tgcagactccaatacgatcttcgcgggtgggagcccagtagaacttctccatacgaccgt 975 Query: 670 cacggat 676 ||||||| Sbjct: 974 cacggat 968 Score = 56.0 bits (28), Expect = 2e-04 Identities = 106/132 (80%) Strand = Plus / Minus Query: 281 gttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgac 340 |||||||||||| ||||| |||| ||||| ||| | ||||| | || || | ||| || Sbjct: 1363 gttagcatcaccaagagcagcctcgctcaagtacttatcagccaattgaactctcttcac 1304 Query: 341 attgtcctgctcctggacgagcatgtgcccgtactctagcagcttctcgactgtcatctt 400 ||| || ||||| ||||| ||||||| |||||||| || ||||| |||| |||||||| Sbjct: 1303 attctcttgctcttggacaagcatgtttccgtactcgaggagcttttcgatagtcatctt 1244 Query: 401 tggctgctcgaa 412 ||||||||||| Sbjct: 1243 cggctgctcgaa 1232 Score = 44.1 bits (22), Expect = 0.59 Identities = 64/78 (82%) Strand = Plus / Minus Query: 479 ccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgga 538 |||||| | ||| ||||||||||| |||| ||| | || ||||| || || ||||| || Sbjct: 1165 ccacttcctcacttcatcgtcgtaaaccctagccctcaaggcaccaaagaaatcaataga 1106 Query: 539 ttgtcctgggaaggtgtc 556 ||| |||||||||||||| Sbjct: 1105 ttggcctgggaaggtgtc 1088
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 79.8 bits (40), Expect = 1e-11 Identities = 61/68 (89%) Strand = Plus / Minus Query: 609 ttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacca 668 ||||||||||| |||||||| || | |||||| ||||||||||| ||||||||||| ||| Sbjct: 1019 ttgcagacaccaatacggtcctccctggtgggtgcccagtagaatttctccatacggcca 960 Query: 669 tcacggat 676 |||||||| Sbjct: 959 tcacggat 952 Score = 40.1 bits (20), Expect = 9.2 Identities = 68/84 (80%) Strand = Plus / Minus Query: 282 ttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgcacacgcttgaca 341 ||||||||||| ||||| |||| | |||||| ||||||| | || || | |||||| Sbjct: 1346 ttagcatcaccaagagcagcctcggacatgtatttgtcagctaattgaactctcttgacg 1287 Query: 342 ttgtcctgctcctggacgagcatg 365 || |||||||||||||| |||||| Sbjct: 1286 ttctcctgctcctggacaagcatg 1263
>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase Length = 2472 Score = 79.8 bits (40), Expect = 1e-11 Identities = 97/116 (83%) Strand = Plus / Minus Query: 270 atcgcatcctggttagcatcacccagagctgcctggctcatgtaggtgtcagcaagctgc 329 |||| ||||| ||| ||||| || |||||||| ||||||| ||| ||||| || || || Sbjct: 118 atcgaatcctcgtttgcatctccaagagctgcttggctcaagtacgtgtctgccagttga 59 Query: 330 acacgcttgacattgtcctgctcctggacgagcatgtgcccgtactctagcagctt 385 || | ||| |||||||||||||||||||| ||||||| || |||||||||||||| Sbjct: 58 actctcttcacattgtcctgctcctggacaagcatgtttccatactctagcagctt 3
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 610 tgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgaccat 669 |||||||||| ||||| || || | || ||||||||||||||||||||||||||||||| Sbjct: 456 tgcagacaccaatacgatcttctctagtaggagcccagtagaacttctccatacgaccat 397 Query: 670 cacggat 676 ||||||| Sbjct: 396 cacggat 390 Score = 48.1 bits (24), Expect = 0.038 Identities = 75/92 (81%) Strand = Plus / Minus Query: 477 acccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatg 536 |||||||| | ||| ||||| |||||||| | ||| | || |||||||| || || ||| Sbjct: 589 acccacttcctcacttcatcatcgtacactctagccctcaatgcaccgaagaaatcgatg 530 Query: 537 gattgtcctgggaaggtgtcgacgatcttgac 568 ||||| || ||||||||||| || |||||||| Sbjct: 529 gattggccagggaaggtgtcaacaatcttgac 498
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 469 ccatgcgcccgtcacggat 451
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 475 ccatgcgcccgtcacggat 457
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 495 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 554 |||||||||||||| || || || || ||||| ||||| ||||| || || ||||||| | Sbjct: 626 tcgtcgtacacccgggcgcggagggcgccgaagaagtcgatggactggcccgggaaggcg 567 Query: 555 tcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacccttgcag 614 ||||||| || |||||| |||||| ||| |||||| ||||||| |||||||| Sbjct: 566 tcgacgagctggacgacgtgctcgtcggggacgccgtcggtgcggaagatgcccttgcac 507 Query: 615 acaccgatacggtcgtcacgggtgggagcccagtagaacttctccat 661 || ||||| ||||| || |||||||| |||||||||||||| ||||| Sbjct: 506 acgccgatgcggtcctcccgggtgggcgcccagtagaacttgtccat 460
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 471 ccatgcgcccgtcacggat 453
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 77.8 bits (39), Expect = 4e-11 Identities = 69/79 (87%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474 Query: 658 ccatacgaccatcacggat 676 |||| || || |||||||| Sbjct: 473 ccatgcgcccgtcacggat 455
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 4541413 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 4541354 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 4541353 ggcaacagggtcggtgcaaccttccggcacaggca 4541319
>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0638A12 Length = 140731 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Minus Query: 81 tgcttaaaaggtgtaaaggcagctgccgtcgtcgctccttgccgttgggtcgtagttctt 140 |||||| ||||||||||||||| ||| ||||| |||| | ||||||||||| |||| || Sbjct: 84787 tgcttagaaggtgtaaaggcagatgctgtcgttgctcatcgccgttgggtcaaagttgtt 84728 Query: 141 ggcattttggtcggtgcaaccttccggcacgggca 175 |||| |||||||||||||||||||||| |||| Sbjct: 84727 ggcaacagggtcggtgcaaccttccggcacaggca 84693
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| |||||||||| || ||||| || | |||||| ||||||||||| ||||| Sbjct: 872 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 813 Query: 659 catacgaccatcacg 673 ||||||||||||||| Sbjct: 812 catacgaccatcacg 798
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 599 gaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctc 658 ||||||||| |||||||||| || ||||| || | |||||| ||||||||||| ||||| Sbjct: 1045 gaagataccagtgcagacaccaattcggtcttctctggtgggcgcccagtagaatttctc 986 Query: 659 catacgaccatcacg 673 ||||||||||||||| Sbjct: 985 catacgaccatcacg 971
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 75.8 bits (38), Expect = 2e-10 Identities = 74/86 (86%) Strand = Plus / Minus Query: 591 tcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtag 650 |||||| |||| || |||||||| ||||| || ||||| || | || || ||||||||| Sbjct: 1042 tcggtccggaaaattcccttgcaaacaccaatgcggtcttcccttgttggtgcccagtag 983 Query: 651 aacttctccatacgaccatcacggat 676 |||||||||||||||||||||||||| Sbjct: 982 aacttctccatacgaccatcacggat 957
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 73.8 bits (37), Expect = 7e-10 Identities = 151/189 (79%) Strand = Plus / Minus Query: 488 cacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgg 547 ||||||||| ||||| || || || | ||||||||| || |||||||| |||||||| || Sbjct: 1106 cacctcatcatcgtatactcgtgccctcagagcaccaaagaagtcaatagattgtccagg 1047 Query: 548 gaaggtgtcgacgatcttgacgacagactcgtcactgacattgtcggtctggaagatacc 607 |||||| ||||| ||||| | || | || ||| || ||||||||| ||| ||||| Sbjct: 1046 gaaggtatcgacaatctttataacggcttcctcaggcacgttgtcggtcctgaaaatacc 987 Query: 608 cttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttctccatacgacc 667 |||||| ||||| || | || || | || || ||||| |||||||||||||||||||| Sbjct: 986 cttgcaaacaccaattctatcttccctagttggtgcccaatagaacttctccatacgacc 927 Query: 668 atcacggat 676 ||||||||| Sbjct: 926 atcacggat 918
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 533 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 474 Query: 658 ccat 661 |||| Sbjct: 473 ccat 470
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccat 661 |||| Sbjct: 471 ccat 468
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 658 ccat 661 |||| Sbjct: 469 ccat 466
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 529 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 470 Query: 658 ccat 661 |||| Sbjct: 469 ccat 466
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 531 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 472 Query: 658 ccat 661 |||| Sbjct: 471 ccat 468
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 71.9 bits (36), Expect = 3e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 598 ggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaacttct 657 ||||||| |||||||| || ||||| |||||||| |||||||| |||||||||||||| | Sbjct: 535 ggaagatgcccttgcacacgccgatgcggtcgtcgcgggtgggcgcccagtagaacttgt 476 Query: 658 ccat 661 |||| Sbjct: 475 ccat 472
>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase (pJQ11) Length = 883 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 642 gcccagtagaacttctccatacgaccatcacggat 676 ||||||||||||||||||||||||||||||||||| Sbjct: 222 gcccagtagaacttctccatacgaccatcacggat 188 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 519 gcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 568 |||||||||||||| || |||||||| |||||| | || || |||||||| Sbjct: 345 gcaccgaaaaagtcgatagattgtccagggaagttatcaacaatcttgac 296
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 590 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 649 ||||||| ||| ||||| ||||| ||||||||||||||||| | || || |||||||| Sbjct: 853 gtcggtcctgaaaatacctttgcaaacaccgatacggtcgtccctagttggtgcccagta 794 Query: 650 gaacttctccatacgaccatcacggat 676 || |||||||||||||| |||||||| Sbjct: 793 aaatttctccatacgaccgtcacggat 767 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 498 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 557 ||||| |||||||| | || |||||||| || || |||||||| || |||||||||||| Sbjct: 945 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 886 Query: 558 acga 561 |||| Sbjct: 885 acga 882
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 642 gcccagtagaacttctccatacgaccatcacggat 676 ||||||||||||||||||||||||||||||||||| Sbjct: 963 gcccagtagaacttctccatacgaccatcacggat 929
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 642 gcccagtagaacttctccatacgaccatcacggat 676 ||||||||||||||||||||||||||||||||||| Sbjct: 982 gcccagtagaacttctccatacgaccatcacggat 948
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 515 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtc 556 ||||||||||||||||||||||||||| || ||||||||||| Sbjct: 1113 cagagcaccgaaaaagtcaatggattggcccgggaaggtgtc 1072 Score = 63.9 bits (32), Expect = 6e-07 Identities = 77/92 (83%) Strand = Plus / Minus Query: 585 acattgtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcc 644 |||||||||||| ||| ||||| |||| |||||||| | || || | |||||| ||| Sbjct: 1043 acattgtcggtcctgaaaatacctgtgcaaacaccgatcctatcttccctggtgggtgcc 984 Query: 645 cagtagaacttctccatacgaccatcacggat 676 ||||| ||||||||||||||||| |||||||| Sbjct: 983 cagtaaaacttctccatacgaccgtcacggat 952
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 65.9 bits (33), Expect = 2e-07 Identities = 69/81 (85%) Strand = Plus / Minus Query: 596 ctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagtagaactt 655 ||||||||| ||| ||||||| ||||| ||||| ||||||||||| ||||||| |||| Sbjct: 1861 ctggaagattcccatgcagacgccgatgcggtcctcacgggtggggttccagtagtactt 1802 Query: 656 ctccatacgaccatcacggat 676 |||||| || || |||||||| Sbjct: 1801 ctccatgcggccgtcacggat 1781 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 324 agctgcacacgcttgacattgtcctgctc 352 |||||||| ||||||||||| |||||||| Sbjct: 2133 agctgcacgcgcttgacattctcctgctc 2105
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 61.9 bits (31), Expect = 3e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 590 gtcggtctggaagatacccttgcagacaccgatacggtcgtcacgggtgggagcccagta 649 ||||||| ||| ||||| ||||| ||||||| ||||||||| | || || |||||||| Sbjct: 852 gtcggtcctgaaaatacctttgcaaacaccgacacggtcgtccctagttggtgcccagta 793 Query: 650 gaacttctccatacgaccatcacggat 676 || |||||||||||||| |||||||| Sbjct: 792 aaatttctccatacgaccgtcacggat 766 Score = 48.1 bits (24), Expect = 0.038 Identities = 54/64 (84%) Strand = Plus / Minus Query: 498 tcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcg 557 ||||| |||||||| | || |||||||| || || |||||||| || |||||||||||| Sbjct: 944 tcgtaaacccgagccctcaaggcaccgaagaaatcgatggattggccggggaaggtgtcg 885 Query: 558 acga 561 |||| Sbjct: 884 acga 881
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 61.9 bits (31), Expect = 3e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 642 gcccagtagaacttctccatacgaccatcacggat 676 ||||||||||| ||||||||||||||||||||||| Sbjct: 999 gcccagtagaatttctccatacgaccatcacggat 965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 515 cagagcaccgaaaaagtcaatggattgtcctgggaaggtgtcgacgatcttgac 568 |||||||||||| || ||||| |||||||| |||||| | |||||||||||||| Sbjct: 1126 cagagcaccgaagaaatcaatagattgtccagggaagctatcgacgatcttgac 1073
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 495 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 554 ||||||||||| || |||||||| || ||||| ||||||||||| || || ||||||||| Sbjct: 2723 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 2664 Query: 555 tc 556 || Sbjct: 2663 tc 2662
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 60.0 bits (30), Expect = 1e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 639 ggagcccagtagaacttctccatacgaccatcacggat 676 ||||||||||||||||| |||||||||||||| ||||| Sbjct: 419 ggagcccagtagaacttttccatacgaccatcgcggat 382
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Minus Query: 495 tcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatggattgtcctgggaaggtg 554 ||||||||||| || |||||||| || ||||| ||||||||||| || || ||||||||| Sbjct: 1033 tcgtcgtacacgcgggcacgcagggcgccgaagaagtcaatggactggccggggaaggtg 974 Query: 555 tc 556 || Sbjct: 973 tc 972
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 642 gcccagtagaacttctccatacgaccatcacg 673 ||||||||||||||||||||||| |||||||| Sbjct: 995 gcccagtagaacttctccatacgcccatcacg 964
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 644 ccagtagaacttctccatacgaccatcacg 673 ||||||||||||||||||||| |||||||| Sbjct: 678 ccagtagaacttctccatacgcccatcacg 649
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 478 cccacttgcgcacctcatcgtcgtacacccgagcacgcagagcaccgaaaaagtcaatgg 537 ||||||| | ||| |||||||| || || ||||| | || |||||| || ||||| || | Sbjct: 1161 cccactttctcacttcatcgtcataaactcgagctctcaaagcaccaaagaagtctattg 1102 Query: 538 attgtcctgggaaggtgtcgac 559 | |||||||||||||||||||| Sbjct: 1101 actgtcctgggaaggtgtcgac 1080 Score = 50.1 bits (25), Expect = 0.010 Identities = 46/53 (86%) Strand = Plus / Minus Query: 621 atacggtcgtcacgggtgggagcccagtagaacttctccatacgaccatcacg 673 ||||| || ||||| || |||||||||||||| || ||||| ||||||||||| Sbjct: 1018 atacgatcttcacgagttggagcccagtagaatttatccatccgaccatcacg 966
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/67 (86%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 612 cagacaccgatacggtcgtcacgggtgggagcccagt--agaacttctccatacgaccat 669 ||||||||||||||||| |||||||| | | ||||| |||||||||||||||| |||| Sbjct: 1016 cagacaccgatacggtcttcacgggtcg--ggccagtcaagaacttctccatacgtccat 959 Query: 670 cacggat 676 || |||| Sbjct: 958 caaggat 952
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 627 tcgtcacgggtgggagcccagtagaacttctccatacgaccatcacg 673 |||||||| || || ||||||||||| || |||||||| |||||||| Sbjct: 6892 tcgtcacgagtaggtgcccagtagaatttttccatacgtccatcacg 6938
>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence Length = 119249 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 catcacccagagctgcctggct 307 |||||||||||||||||||||| Sbjct: 51275 catcacccagagctgcctggct 51254
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16 Length = 349142 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 546 gggaaggtgtcgacgatcttg 566 ||||||||||||||||||||| Sbjct: 3653 gggaaggtgtcgacgatcttg 3673
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 208 atgcagcaagagatggtgggt 228 ||||||||||||||||||||| Sbjct: 63530 atgcagcaagagatggtgggt 63550
>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence Length = 98713 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 596 ctggaagatacccttgcagacacc 619 ||||| |||||||||||||||||| Sbjct: 67288 ctggatgatacccttgcagacacc 67265
>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 262062 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cctttacctcctcctatgca 212 |||||||||||||||||||| Sbjct: 46359 cctttacctcctcctatgca 46378
>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel alpha subunit mRNA, partial cds Length = 3448 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1542 catcgcccagagctgcctggctca 1565
>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18, and complete cds Length = 16432 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cctttacctcctcctatgca 212 |||||||||||||||||||| Sbjct: 1637 cctttacctcctcctatgca 1656
>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence Length = 202128 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cctttacctcctcctatgca 212 |||||||||||||||||||| Sbjct: 32945 cctttacctcctcctatgca 32964
>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA Length = 531 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 gtcagcaagctgcacacgct 336 |||||||||||||||||||| Sbjct: 242 gtcagcaagctgcacacgct 223
>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B Length = 1010 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 564 ttgacgacagactcgtcact 583 |||||||||||||||||||| Sbjct: 289 ttgacgacagactcgtcact 308
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 642 gcccagtagaacttctccatacgaccatcacg 673 ||||| ||||| |||||||||||||| ||||| Sbjct: 103825 gcccaatagaatttctccatacgaccgtcacg 103856
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 40.1 bits (20), Expect = 9.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 642 gcccagtagaacttctccatacgaccatcacg 673 ||||| ||||| |||||||||||||| ||||| Sbjct: 82850 gcccaatagaatttctccatacgaccgtcacg 82881
>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA, complete cds Length = 3459 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1596 catcgcccagagctgcctggctca 1619
>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence Length = 161308 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ttgacattgtcctgctcctg 355 |||||||||||||||||||| Sbjct: 126438 ttgacattgtcctgctcctg 126419
>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel, subfamily M, alpha member 1 (KCNMA1), mRNA Length = 6183 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1912 catcgcccagagctgcctggctca 1935
>gb|AE011750.1| Xanthomonas axonopodis pv. citri str. 306, section 128 of 469 of the complete genome Length = 11388 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 90 ggtgtaaaggcagctgccgtcgtcgctc 117 |||||| |||| |||||||||||||||| Sbjct: 5160 ggtgtacaggctgctgccgtcgtcgctc 5133
>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens 22q11.2 DGCR Region, complete sequence Length = 176974 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cctttacctcctcctatgca 212 |||||||||||||||||||| Sbjct: 34662 cctttacctcctcctatgca 34681
>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds, alternatively spliced Length = 3430 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1636 catcgcccagagctgcctggctca 1659
>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds, alternatively spliced Length = 4490 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 2003 catcgcccagagctgcctggctca 2026
>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds, alternatively spliced Length = 6183 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1912 catcgcccagagctgcctggctca 1935
>emb|BX000985.18| Zebrafish DNA sequence from clone DKEY-13M3 in linkage group 15, complete sequence Length = 134752 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 tggcatgcttaaaaggtgta 95 |||||||||||||||||||| Sbjct: 78235 tggcatgcttaaaaggtgta 78254
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 acaccgatacggtcgtcacg 634 |||||||||||||||||||| Sbjct: 3056308 acaccgatacggtcgtcacg 3056327
>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence Length = 125424 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ttgacattgtcctgctcctg 355 |||||||||||||||||||| Sbjct: 106960 ttgacattgtcctgctcctg 106979
>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit (KCNMA1), mRNA Length = 3459 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 catcacccagagctgcctggctca 309 |||| ||||||||||||||||||| Sbjct: 1596 catcgcccagagctgcctggctca 1619
>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle) (predicted) (Lmod1_predicted), mRNA Length = 1920 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 182 cttgctgtgctcctttacctcctc 205 ||||||| |||||||||||||||| Sbjct: 648 cttgctgggctcctttacctcctc 625
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence Length = 158595 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cctttacctcctcctatgca 212 |||||||||||||||||||| Sbjct: 27755 cctttacctcctcctatgca 27736 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,170,602 Number of Sequences: 3902068 Number of extensions: 4170602 Number of successful extensions: 72975 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72545 Number of HSP's gapped (non-prelim): 362 length of query: 676 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 653 effective length of database: 17,143,297,704 effective search space: 11194573400712 effective search space used: 11194573400712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
