ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd1k03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127H21, full insert sequence Length = 895 Score = 595 bits (300), Expect = e-167 Identities = 373/396 (94%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 314 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 373 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 618 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 559 Query: 374 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 433 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 558 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 499 Query: 434 cacacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccact 493 |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 498 cacacagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccact 439 Query: 494 ggttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccc 553 |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || Sbjct: 438 ggttctgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcc 379 Query: 554 tagagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaa 613 |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 378 tagaaacaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaa 319 Query: 614 gcttgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccaga 673 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 318 gcttgaacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccaga 259 Query: 674 gcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||| |||||||||||||||||||||||| Sbjct: 258 gcatgatgttg-ttgtcgtgcggcgcgccgctgatc 224 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 268 tttcatggttgcttattgcaactttctggca 298 ||||| |||||||||||||| |||||||||| Sbjct: 678 tttcacggttgcttattgcatctttctggca 648
>dbj|AK070524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055G02, full insert sequence Length = 4109 Score = 595 bits (300), Expect = e-167 Identities = 373/396 (94%), Gaps = 1/396 (0%) Strand = Plus / Minus Query: 314 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 373 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 574 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 515 Query: 374 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 433 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 514 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 455 Query: 434 cacacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccact 493 |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 454 cacacagcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccact 395 Query: 494 ggttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccc 553 |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| || Sbjct: 394 ggttctgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcc 335 Query: 554 tagagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaa 613 |||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 334 tagaaacaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaa 275 Query: 614 gcttgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccaga 673 ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 274 gcttgaacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccaga 215 Query: 674 gcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||| |||||||||||||||||||||||| Sbjct: 214 gcatgatgttg-ttgtcgtgcggcgcgccgctgatc 180 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 268 tttcatggttgcttattgcaactttctggca 298 ||||| |||||||||||||| |||||||||| Sbjct: 634 tttcacggttgcttattgcatctttctggca 604
>ref|XM_476729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 593 bits (299), Expect = e-166 Identities = 369/391 (94%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 |||||||| |||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 458 tagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 |||||||| |||| |||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 398 ttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggatcacac 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 338 agcaaagactgaattgaagtcaatatggcagcaacatcatatatagggctccactggttc 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| Sbjct: 278 tgtagaatatccaagcagatgcttccatctgcataaatatttgggtggaacatcctagaa 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 218 acaaaccgaacagtcggcggcttgttgggataatcttctgtaaactgcaaggtaagcttg 159 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 158 aacgtgcctccgtcccacggcgtatcatccggcccgaagatgacggcgttccagagcatg 99 Query: 679 atgttgtttgtcgtgcggcgcgccgctgatc 709 |||||| |||||||||||||||||||||||| Sbjct: 98 atgttg-ttgtcgtgcggcgcgccgctgatc 69
>gb|AY103578.1| Zea mays PCO136701 mRNA sequence Length = 1179 Score = 474 bits (239), Expect = e-130 Identities = 354/391 (90%), Gaps = 1/391 (0%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||||| Sbjct: 800 tagtcggctgtccagctctgctccacaatctcgcggactttgcggttgtactcccgcttg 741 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 ||||| ||||||| ||| || ||||| || ||||| || ||||| ||||||||||||||| Sbjct: 740 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtttggatcacac 681 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 |||| |||||| ||||||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 680 agcagggactggatagaagtcaagattgcagcaacatcatatataggactccactggttc 621 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||| ||||||| Sbjct: 620 tgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctagag 561 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 || || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 560 acgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagcttg 501 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 500 aacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcatg 441 Query: 679 atgttgtttgtcgtgcggcgcgccgctgatc 709 |||||| |||||||||||||||||||||||| Sbjct: 440 atgttg-ttgtcgtgcggcgcgccgctgatc 411
>gb|BT016345.1| Zea mays clone Contig178 mRNA sequence Length = 965 Score = 456 bits (230), Expect = e-125 Identities = 351/390 (90%), Gaps = 1/390 (0%) Strand = Plus / Plus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| || ||||||||||||||||| ||||| |||||||| |||| | |||| |||||| Sbjct: 357 tagtcggctgtccagctctgctccacaatctcgcggactttgcggtggaactcccgcttg 416 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 ||||| ||||||| ||| || ||||| || ||||| || ||||| |||| |||||||||| Sbjct: 417 ttctcgctgaacagtcttgcggcttctgagtttgcaggggagttcgggtctggatcacac 476 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 |||| |||||||||||||||||| || |||||||| ||||||||||| |||||||||||| Sbjct: 477 agcagggactgaatagaagtcaagattgcagcaacatcatatataggactccactggttc 536 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 ||||| ||||||||||||||||| ||||| ||||| || ||||| ||||||| ||||||| Sbjct: 537 tgtaggatatccaagcagatgcttccatcagcatatatgtttggatgaaacatcctagag 596 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 || || ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 597 acgaaccgaacagttggtggcttgtttgggtaatcttctgtaaactgcaaggtaagcttg 656 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 657 aacgtgcctccgtcccaaggcgtatcatccggcccgaatatgacggcgttccagagcatg 716 Query: 679 atgttgtttgtcgtgcggcgcgccgctgat 708 |||||| ||||||||||||||||||||||| Sbjct: 717 atgttg-ttgtcgtgcggcgcgccgctgat 745
>ref|XM_469945.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1025 Score = 404 bits (204), Expect = e-109 Identities = 346/392 (88%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 641 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 582 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 581 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 522 Query: 437 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 496 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 521 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 462 Query: 497 tctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctag 556 | ||||| |||||||||||||| || |||||||||||||||||||||||||||| ||| | Sbjct: 461 tttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttg 402 Query: 557 agacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagct 616 ||||||| |||||| ||| || |||||||| |||||||||||||| || | || |||| Sbjct: 401 agacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagct 342 Query: 617 tgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagca 676 |||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 341 tgaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagca 282 Query: 677 tgatgttgtttgtcgtgcggcgcgccgctgat 708 |||||||| ||||||||||||||||||||||| Sbjct: 281 tgatgttg-ttgtcgtgcggcgcgccgctgat 251
>dbj|AB079798.1| Oryza sativa (japonica cultivar-group) OsRad6 mRNA for Rad6, complete cds Length = 764 Score = 404 bits (204), Expect = e-109 Identities = 346/392 (88%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 634 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 575 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 574 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 515 Query: 437 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 496 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 514 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 455 Query: 497 tctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctag 556 | ||||| |||||||||||||| || |||||||||||||||||||||||||||| ||| | Sbjct: 454 tttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttg 395 Query: 557 agacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagct 616 ||||||| |||||| ||| || |||||||| |||||||||||||| || | || |||| Sbjct: 394 agacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagct 335 Query: 617 tgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagca 676 |||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 334 tgaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagca 275 Query: 677 tgatgttgtttgtcgtgcggcgcgccgctgat 708 |||||||| ||||||||||||||||||||||| Sbjct: 274 tgatgttg-ttgtcgtgcggcgcgccgctgat 244
>dbj|AK120251.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045G10, full insert sequence Length = 847 Score = 404 bits (204), Expect = e-109 Identities = 346/392 (88%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 641 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 582 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 581 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 522 Query: 437 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 496 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 521 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 462 Query: 497 tctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctag 556 | ||||| |||||||||||||| || |||||||||||||||||||||||||||| ||| | Sbjct: 461 tttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttg 402 Query: 557 agacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagct 616 ||||||| |||||| ||| || |||||||| |||||||||||||| || | || |||| Sbjct: 401 agacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagct 342 Query: 617 tgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagca 676 |||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 341 tgaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagca 282 Query: 677 tgatgttgtttgtcgtgcggcgcgccgctgat 708 |||||||| ||||||||||||||||||||||| Sbjct: 281 tgatgttg-ttgtcgtgcggcgcgccgctgat 251
>dbj|AK067703.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J09, full insert sequence Length = 882 Score = 404 bits (204), Expect = e-109 Identities = 346/392 (88%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 627 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 568 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 567 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 508 Query: 437 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 496 | |||| |||||| ||||| |||||||| |||||||| ||||||||||||||||| || | Sbjct: 507 agagcagggactggatagaggtcaatatcgcagcaacatcatatatagggctccattgat 448 Query: 497 tctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctag 556 | ||||| |||||||||||||| || |||||||||||||||||||||||||||| ||| | Sbjct: 447 tttgtaggatatccaagcagatacttccatctgcataaatatttgggtgaaacatccttg 388 Query: 557 agacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagct 616 ||||||| |||||| ||| || |||||||| |||||||||||||| || | || |||| Sbjct: 387 agacaaaccgaacaactggtggtttgttgggataatcttctgtaaattgtagtgtcagct 328 Query: 617 tgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagca 676 |||| |||||||| ||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 327 tgaacgtgcctccatcccacggcgtgtcatccggtccgaatatgacggcgttccagagca 268 Query: 677 tgatgttgtttgtcgtgcggcgcgccgctgat 708 |||||||| ||||||||||||||||||||||| Sbjct: 267 tgatgttg-ttgtcgtgcggcgcgccgctgat 237
>gb|M62720.1|WHTUCP1A Wheat ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 773 Score = 377 bits (190), Expect = e-101 Identities = 341/390 (87%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| || ||||||||||||||||||| |||||| || || ||||||||||| |||||| Sbjct: 574 tagtccgctgtccagctctgctccacgacctcacgaaccttgcggttgtactcgcgcttg 515 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 ||||| ||| |||||||||| ||||| || || || ||||| || ||||| || || ||| Sbjct: 514 ttctcgctgtacattctggctgcttcagagttcgcaggagaattcgggttcgggtcgcac 455 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 |||| |||||| ||||| |||||||| || ||||| |||||||||||||||||||||||| Sbjct: 454 agcagggactggatagaggtcaatattgctgcaacatcatatatagggctccactggttc 395 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 ||||| || |||||||||||||| |||||||||||||| ||||||||||||| ||| ||| Sbjct: 394 tgtaggatgtccaagcagatgcttccatctgcataaatgtttgggtgaaacatccttgag 335 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||||||||| ||||||||||||||||||||||| || |||| ||| |||||| Sbjct: 334 acaaaccgaacagttggtggcttgttggggtaatcttctgtgaattgcagggtcagcttg 275 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| ||||| ||||| ||||| || || || ||||||||||||||||| || Sbjct: 274 aacgtacctccatcccacggcgtgtcatcaggcccaaatatgacggcgttccagagggtg 215 Query: 679 atgttgtttgtcgtgcggcgcgccgctgat 708 |||||| ||||||||||||||||||||||| Sbjct: 214 atgttg-ttgtcgtgcggcgcgccgctgat 186
>gb|BT017249.1| Zea mays clone EL01N0307D01.c mRNA sequence Length = 863 Score = 375 bits (189), Expect = e-100 Identities = 334/381 (87%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| | ||| || ||||| ||||||||||| ||||||||||| ||| Sbjct: 622 gtccagctctgctccacaacctcgcgaactttgcggttgtactcgcgcttgttctcgctg 563 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 |||||||| || ||||| || || || ||||| || |||||||| |||||||||| |||| Sbjct: 562 aacattctcgctgcttcagagttggcaggagaatttgggtttgggtcacacagcagggac 503 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 |||||||| |||||||| || ||||| || |||||||| ||||||||||| ||||| || Sbjct: 502 tgaatagaggtcaatattgccgcaacatcgtatataggactccactggttttgtaggatg 443 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 ||||| |||||||| ||||| |||||||| ||||||||||||| ||| || ||||| ||| Sbjct: 442 tccaaacagatgcttccatccgcataaatgtttgggtgaaacatcctcgaaacaaaccga 383 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||| || || ||||||||||||||||||||||| |||| || |||||||| |||||| Sbjct: 382 acagtcggaggtttgttggggtaatcttctgtaaattgcagagtcagcttgaacgtgcct 323 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgttt 687 |||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||| || Sbjct: 322 ccgtcccacggcgtgtcatccggcccgaatatgacggcgttccagagcatgatgttg-tt 264 Query: 688 gtcgtgcggcgcgccgctgat 708 ||||||||||||||||||||| Sbjct: 263 gtcgtgcggcgcgccgctgat 243
>gb|AY389584.1| Hyacinthus orientalis ubiquitin-conjugating enzyme (UBC) mRNA, partial cds Length = 691 Score = 210 bits (106), Expect = 5e-51 Identities = 304/370 (82%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 |||||||||| ||||||||||| ||||| ||||| ||||| | ||||||||||| |||| Sbjct: 450 cttagtcagccgtccagctctgttccactatctctcggacccttcggttgtactcacgct 391 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| |||||||| | ||||| || || || || || ||||| |||||||| |||| Sbjct: 390 tgttctcgctgaacatccgagcagcctcagagttggccggggagtttgggtttgggtcac 331 Query: 437 acagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggt 496 | || | ||||||||||| |||| ||| || ||||| ||||| || || ||||| |||| Sbjct: 330 agaggagagactgaatagatgtcagtatagctgcaacatcataaatgggactccattggt 271 Query: 497 tctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctag 556 |||||| |||||||| ||| ||||||||||||||||| || ||||| ||||||| || | Sbjct: 270 tctgtaaaatatccaggcatatgctcccatctgcatatatgtttggatgaaacattcttg 211 Query: 557 agacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagct 616 ||||||| ||||| ||||| ||||| || || ||||| || || || ||||| || | | Sbjct: 210 agacaaaccgaactgttggtggcttattaggataatcctcggtgaattgcaatgtcaatt 151 Query: 617 tgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagca 676 | || || ||||| |||||||| |||||||| || || ||||| || ||||||||||||| Sbjct: 150 taaaggtacctccatcccatggagtatcatcaggcccaaagatcactgcgttccagagca 91 Query: 677 tgatgttgtt 686 |||||||||| Sbjct: 90 tgatgttgtt 81
>gb|AF262934.1|AF262934 Avicennia marina ubiquitin conjugating protein (UBC) mRNA, complete cds Length = 850 Score = 210 bits (106), Expect = 5e-51 Identities = 298/362 (82%) Strand = Plus / Minus Query: 322 tcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttc 381 ||||| |||||||| |||||||| || || | ||| | || ||||| || ||||||||| Sbjct: 514 tcagctgtccagctttgctccacaatttcccttactctgcgattgtattcgcgcttgttc 455 Query: 382 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 441 ||||||||||| | |||||||| |||||||| ||||| || || || || ||||||| | Sbjct: 454 tcactgaacatccgagcagcttcagaatttgcaggagaatttggattcgggtcacacaac 395 Query: 442 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 501 | ||||| ||||| || | |||||| |||| |||||||||||| ||||| ||||| || Sbjct: 394 agtgactggatagacgtaagtatggctgcaatgtcatatataggactccattggttttga 335 Query: 502 agaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagaca 561 || || |||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||| Sbjct: 334 aggatgtccaagcatatgcttccatccgcataaatatttgggtgaaacattctagaaaca 275 Query: 562 aaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaat 621 || ||||| ||||| || ||||| || ||||||||||| ||||| | ||| || |||||| Sbjct: 274 aatcgaactgttggtggtttgtttggataatcttctgtgaactgaagggtcagtttgaat 215 Query: 622 gtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatg 681 || ||||| ||||||||||||||||| || || || || || || ||||||||||| ||| Sbjct: 214 gtacctccatcccatggcgtatcatcaggaccaaatataactgcattccagagcataatg 155 Query: 682 tt 683 || Sbjct: 154 tt 153
>gb|AY660750.1| Populus tomentosa ubiquitin carrier protein mRNA, complete cds Length = 700 Score = 196 bits (99), Expect = 7e-47 Identities = 303/371 (81%) Strand = Plus / Minus Query: 316 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 375 ||||||||||||||||||||||||||||| || ||||| ||| | || ||||| || ||| Sbjct: 655 ccttagtcagcagtccagctctgctccacaatttcacgaactctgcgattgtattcccgc 596 Query: 376 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 435 || |||||||||||||| | || ||||| || |||||||| || || |||||||||||| Sbjct: 595 ttattctcactgaacatgcgagcggcttcagagtttgctggggaatttgggtttggatca 536 Query: 436 cacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactgg 495 || |||| |||||| || ||||| | ||| |||||||| |||||||| || |||||||| Sbjct: 535 cagagcagggactggatggaagttagtatagcagcaacatcatatatgggactccactga 476 Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 || |||| ||| || ||||| || || |||||||||||||||||||| ||||||| | | Sbjct: 475 ttttgtaaaatgtctaagcatatacttccatctgcataaatatttggatgaaacattcga 416 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagc 615 |||||||| || || ||||| || || || || ||||| ||||| || || | || | | Sbjct: 415 gagacaaagcggactgttggaggtttatttggataatcctctgtgaattgaagagtcaac 356 Query: 616 ttgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagc 675 || || || ||||| ||||| || |||||||| || || || || || |||||||||||| Sbjct: 355 ttaaacgtccctccatcccaaggagtatcatcaggtccaaatataacagcgttccagagc 296 Query: 676 atgatgttgtt 686 ||||||||||| Sbjct: 295 atgatgttgtt 285
>gb|BT013884.1| Lycopersicon esculentum clone 132865R, mRNA sequence Length = 794 Score = 194 bits (98), Expect = 3e-46 Identities = 224/266 (84%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 |||||||||||||| || |||||||| || || | ||||||||| ||||||||||||||| Sbjct: 509 gtccagctctgctcaacaatctcacgcaccttcctgttgtactcacgcttgttctcactg 450 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 ||||| | || ||||| ||||| || || ||||| |||||||||||||| ||||| ||| Sbjct: 449 aacatgcgagctgcttctgaattagcaggcgagtttgggtttggatcacaaagcaaagac 390 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || ||||| | ||| |||||||||||||||||||| |||||||| || || || || Sbjct: 389 tggattgaagtgagtatagcagcaacgtcatatataggactccactgattttgcagtatg 330 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 || ||||| || |||||||| ||||||||||| || || |||| ||| || ||||| ||| Sbjct: 329 tctaagcaaatactcccatcggcataaatattcggatggaacatcctggatacaaatcga 270 Query: 568 acagttggcggcttgttggggtaatc 593 || ||||| ||||||||||||||||| Sbjct: 269 accgttggaggcttgttggggtaatc 244
>gb|BT017437.1| Zea mays clone EL01N0404C11.c mRNA sequence Length = 425 Score = 192 bits (97), Expect = 1e-45 Identities = 154/173 (89%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 |||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| ||| Sbjct: 181 gtccagctctgctccacgatctcacggactttgcgggtgtactcccgcttgttctcgctg 122 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 |||| ||| || ||||| || ||||| || ||||| ||||||||||||||||||| |||| Sbjct: 121 aacagtcttgctgcttctgagtttgcaggggagtttgggtttggatcacacagcagggac 62 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctg 500 || |||||||| || || |||||||| ||||||||||| |||||||||||||| Sbjct: 61 tggatagaagttaaaattgcagcaacatcatatataggactccactggttctg 9
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 314 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 373 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 3621794 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 3621853 Query: 374 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 433 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 3621854 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 3621913 Query: 434 cacacagcaaggactg 449 |||||||||| ||||| Sbjct: 3621914 cacacagcaaagactg 3621929 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 447 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 506 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3622572 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 3622631 Query: 507 atccaagcagatgctcccatctgcataaa 535 ||||||||||||||| ||||||||||||| Sbjct: 3622632 atccaagcagatgcttccatctgcataaa 3622660 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 |||||||||| |||| |||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 3622780 tatttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatctt 3622839 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||||||||||||||||||||| |||||| Sbjct: 3622840 ctgtaaactgcaaggtaagcttgaacgtgcct 3622871 Score = 99.6 bits (50), Expect = 1e-17 Identities = 57/58 (98%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 3625757 ccgaagatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgatc 3625813 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 tttcatggttgcttattgcaactttctggca 298 ||||| |||||||||||||| |||||||||| Sbjct: 3621734 tttcacggttgcttattgcatctttctggca 3621764 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 625 cctccgtcccatggcgtatcatccgg 650 ||||||||||| |||||||||||||| Sbjct: 3625521 cctccgtcccacggcgtatcatccgg 3625546
>dbj|AP003842.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1641_C04 Length = 134367 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 314 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 373 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 91111 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 91170 Query: 374 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 433 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 91171 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 91230 Query: 434 cacacagcaaggactg 449 |||||||||| ||||| Sbjct: 91231 cacacagcaaagactg 91246 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 447 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 506 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91889 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 91948 Query: 507 atccaagcagatgctcccatctgcataaa 535 ||||||||||||||| ||||||||||||| Sbjct: 91949 atccaagcagatgcttccatctgcataaa 91977 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 |||||||||| |||| |||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 92097 tatttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatctt 92156 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||||||||||||||||||||| |||||| Sbjct: 92157 ctgtaaactgcaaggtaagcttgaacgtgcct 92188 Score = 99.6 bits (50), Expect = 1e-17 Identities = 57/58 (98%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 95074 ccgaagatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgatc 95130 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 tttcatggttgcttattgcaactttctggca 298 ||||| |||||||||||||| |||||||||| Sbjct: 91051 tttcacggttgcttattgcatctttctggca 91081 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 625 cctccgtcccatggcgtatcatccgg 650 ||||||||||| |||||||||||||| Sbjct: 94838 cctccgtcccacggcgtatcatccgg 94863
>dbj|AP004267.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0039H02 Length = 169162 Score = 190 bits (96), Expect = 4e-45 Identities = 126/136 (92%) Strand = Plus / Plus Query: 314 tgccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctc 373 |||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||| Sbjct: 159744 tgccctagtcagctgtccagctctgctccacgatctcacgaaccttgcggttgtactctc 159803 Query: 374 gcttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggat 433 ||||||||||||| |||| |||||||||||| || ||||||||||||||||||||||||| Sbjct: 159804 gcttgttctcactaaacagtctggcagcttctgagtttgctggagagttggggtttggat 159863 Query: 434 cacacagcaaggactg 449 |||||||||| ||||| Sbjct: 159864 cacacagcaaagactg 159879 Score = 153 bits (77), Expect = 9e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 447 ctgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaat 506 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 160522 ctgaattgaagtcaatatggcagcaacatcatatatagggctccactggttctgtagaat 160581 Query: 507 atccaagcagatgctcccatctgcataaa 535 ||||||||||||||| ||||||||||||| Sbjct: 160582 atccaagcagatgcttccatctgcataaa 160610 Score = 127 bits (64), Expect = 5e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 |||||||||| |||| |||||| ||||| |||||||| |||||||||||||| ||||||| Sbjct: 160730 tatttgggtggaacatcctagaaacaaaccgaacagtcggcggcttgttgggataatctt 160789 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||||||||||||||||||||| |||||| Sbjct: 160790 ctgtaaactgcaaggtaagcttgaacgtgcct 160821 Score = 99.6 bits (50), Expect = 1e-17 Identities = 57/58 (98%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 163707 ccgaagatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgatc 163763 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Plus Query: 268 tttcatggttgcttattgcaactttctggca 298 ||||| |||||||||||||| |||||||||| Sbjct: 159684 tttcacggttgcttattgcatctttctggca 159714 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 625 cctccgtcccatggcgtatcatccgg 650 ||||||||||| |||||||||||||| Sbjct: 163471 cctccgtcccacggcgtatcatccgg 163496
>dbj|AK112003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-F01, full insert sequence Length = 947 Score = 188 bits (95), Expect = 2e-44 Identities = 293/359 (81%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 669 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 610 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 || | | ||||||||| || || || || || || ||||||||||| || |||| ||| Sbjct: 609 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 550 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || || || | ||| ||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 549 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 490 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 || ||||| ||||||||||| |||||||| || || ||||||| || ||| ||||| || Sbjct: 489 tctaagcatatgctcccatcagcataaatgttaggatgaaacatccgagaaacaaatcgc 430 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 || || || |||||||| || |||||||| |||||||| | || |||||||| || ||| Sbjct: 429 actgtaggtggcttgttaggataatcttcagtaaactgaagtgtcagcttgaacgtacct 370 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgtt 686 || ||||| || |||||||| ||||| || || || || ||||| ||||| || ||||| Sbjct: 369 ccatcccaaggagtatcatcagggccaaaaattacagcattccaaagcattatattgtt 311
>ref|NM_202096.1| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.2 mRNA, complete cds Length = 819 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 550 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 491 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 490 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 431 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 430 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 371 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 370 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 311 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 310 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 251 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 250 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 191 Query: 679 atgttgtt 686 |||||||| Sbjct: 190 atgttgtt 183
>ref|NM_101307.2| Arabidopsis thaliana UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT1G14400 (UBC1) transcript variant AT1G14400.1 mRNA, complete cds Length = 948 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 440 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 439 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 380 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 379 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 320 Query: 679 atgttgtt 686 |||||||| Sbjct: 319 atgttgtt 312
>gb|AF332451.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme 1 (At1g14400) mRNA, complete cds Length = 459 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 679 atgttgtt 686 |||||||| Sbjct: 98 atgttgtt 91
>gb|AY091330.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme 1 (UBC1) (At1g14400) mRNA, complete cds Length = 490 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 679 atgttgtt 686 |||||||| Sbjct: 98 atgttgtt 91
>gb|AY070074.1| Arabidopsis thaliana putative E2, ubiquitin-conjugating enzyme UBC1 (At1g14400) mRNA, complete cds Length = 839 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 631 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 572 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 571 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 512 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 511 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 452 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 451 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 392 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 391 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 332 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 331 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 272 Query: 679 atgttgtt 686 |||||||| Sbjct: 271 atgttgtt 264
>emb|BX816760.1|CNS0AD3H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 847 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 604 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 545 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 544 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 485 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 484 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 425 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 424 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 365 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 364 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 305 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 304 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 245 Query: 679 atgttgtt 686 |||||||| Sbjct: 244 atgttgtt 237
>gb|AY085783.1| Arabidopsis thaliana clone 18146 mRNA, complete sequence Length = 838 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 679 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 620 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 619 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 560 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 559 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 500 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 499 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 440 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 439 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 380 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 379 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 320 Query: 679 atgttgtt 686 |||||||| Sbjct: 319 atgttgtt 312
>gb|DQ027016.1| Arabidopsis thaliana ubiquitinating enzyme (At1g14400) mRNA, complete cds Length = 459 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 458 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 398 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 338 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 278 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 218 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 159 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 158 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 99 Query: 679 atgttgtt 686 |||||||| Sbjct: 98 atgttgtt 91
>gb|M62721.1|ATHUCP1B Arabidopsis thaliana ubiquitin carrier protein (UBC1) mRNA, complete cds Length = 749 Score = 174 bits (88), Expect = 3e-40 Identities = 298/368 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 557 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 498 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 497 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 438 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| Sbjct: 437 agcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggttt 378 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 |||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || Sbjct: 377 tgtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgac 318 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttg 618 ||||| ||||| ||||| || || ||||| |||||||| | ||||||| | || ||| Sbjct: 317 acaaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttg 258 Query: 619 aatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatg 678 || || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| Sbjct: 257 aaagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcata 198 Query: 679 atgttgtt 686 |||||||| Sbjct: 197 atgttgtt 190
>gb|BT018048.1| Zea mays clone EL01N0531D04.c mRNA sequence Length = 817 Score = 172 bits (87), Expect = 1e-39 Identities = 291/359 (81%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 580 gtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgttctcgctg 521 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 ||||| | ||| ||||| || || || || || || ||||||||||| |||| ||| ||| Sbjct: 520 aacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcacaacaatgac 461 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || || || | ||| ||||| || |||||||| || |||||||| ||||| || ||| Sbjct: 460 tggattgacgtgagtatcgcagctacatcatatatcggactccactgattctgcaggata 401 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 || ||||| ||||| ||||| |||||||| || || || |||| |||||| ||||| || Sbjct: 400 tctaagcatatgcttccatcagcataaatgttaggatggaacatcctagaaacaaatcgc 341 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 |||||||| || ||||| || || ||||| ||||||| | || ||||| || || ||| Sbjct: 340 acagttggtggtttgtttggatattcttcattaaactggagagtcagcttaaacgtacct 281 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgtt 686 || ||||| || |||||||| || || || ||||| || ||||| ||||| |||||||| Sbjct: 280 ccatcccacggggtatcatcaggtccaaatatgacagcattccacagcattatgttgtt 222
>emb|BX817066.1|CNS0AD3L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH83ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 172 bits (87), Expect = 1e-39 Identities = 297/367 (80%) Strand = Plus / Minus Query: 320 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 379 |||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 650 agtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttgc 591 Query: 380 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 439 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| | Sbjct: 590 tttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacaga 531 Query: 440 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 499 |||||||||| || || || | ||| |||||||| ||||| || || ||||||||||| | Sbjct: 530 gcaaggactggatggaggtaagtatagcagcaacatcatagattggactccactggtttt 471 Query: 500 gtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagaga 559 ||||||| ||||||||||| |||||||||||||||||||| || ||||||| || || | Sbjct: 470 gtagaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgaca 411 Query: 560 caaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttga 619 |||| ||||| ||||| || || ||||| |||||||| | ||||||| | || |||| Sbjct: 410 caaaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttga 351 Query: 620 atgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatga 679 | || ||||| |||||||| || ||||| || || || ||||| || ||||||||||| | Sbjct: 350 aagtacctccatcccatggtgtgtcatcaggcccaaatatgacagcattccagagcataa 291 Query: 680 tgttgtt 686 ||||||| Sbjct: 290 tgttgtt 284
>gb|AY104593.1| Zea mays PCO096181 mRNA sequence Length = 1003 Score = 172 bits (87), Expect = 1e-39 Identities = 291/359 (81%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||||| ||| || ||||| ||||||||||||||||||||||| ||| Sbjct: 666 gtccagctctgctccacgacctcccgaactttgcggttgtactctcgcttgttctcgctg 607 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 ||||| | ||| ||||| || || || || || || ||||||||||| |||| ||| ||| Sbjct: 606 aacatgcgggcggcttcagagttagcgggcgaattcgggtttggatcgcacaacaatgac 547 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || || || | ||| ||||| || |||||||| || |||||||| ||||| || ||| Sbjct: 546 tggattgacgtgagtatcgcagctacatcatatatcggactccactgattctgcaggata 487 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 || ||||| ||||| ||||| |||||||| || || || |||| |||||| ||||| || Sbjct: 486 tctaagcatatgcttccatcagcataaatgttaggatggaacatcctagaaacaaatcgc 427 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 |||||||| || ||||| || || ||||| ||||||| | || ||||| || || ||| Sbjct: 426 acagttggtggtttgtttggatattcttcattaaactggagagtcagcttaaacgtacct 367 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgtt 686 || ||||| || |||||||| || || || ||||| || ||||| ||||| |||||||| Sbjct: 366 ccatcccacggggtatcatcaggtccaaatatgacagcattccacagcattatgttgtt 308
>gb|L06967.1|ALFUBIQUIT Medicago sativa ubiquitin carrier protein mRNA, complete cds Length = 910 Score = 165 bits (83), Expect = 2e-37 Identities = 299/371 (80%) Strand = Plus / Minus Query: 316 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 375 ||||||||||| ||||| ||||||||||| | || || ||| |||| |||||||| ||| Sbjct: 585 ccttagtcagctgtccaactctgctccacaacttcccgcactctacgattgtactcacgc 526 Query: 376 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 435 ||||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 525 ttgttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatca 466 Query: 436 cacagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactgg 495 || ||||| ||||| |||||||| | || |||||||| ||||||||||| |||||||| Sbjct: 465 caaagcaatgactggatagaagtgagaatcgcagcaacatcatatataggactccactga 406 Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 || || | ||||||| || || || |||||||||||||| ||||| ||||||| | Sbjct: 405 ttttgcaatatatccagacaaatacttccatctgcataaatgtttggatgaaacattcgg 346 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagc 615 |||||||| || ||||| || |||||||| || ||||| || | ||| || | | | | | Sbjct: 345 gagacaaatcgtacagtgggtggcttgttcggataatcctcggaaaattgaaggctcaac 286 Query: 616 ttgaatgtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagc 675 || || |||||||| |||||||| |||||||| || || || || || || ||||| ||| Sbjct: 285 ttaaacgtgcctccatcccatggagtatcatcaggaccaaatataacagcattccacagc 226 Query: 676 atgatgttgtt 686 ||||| ||||| Sbjct: 225 atgatattgtt 215
>emb|AJ879070.1| Capsicum chinense mRNA for ubiquitin-conjugating enzyme Length = 957 Score = 163 bits (82), Expect = 1e-36 Identities = 226/274 (82%) Strand = Plus / Minus Query: 320 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 379 ||||||| |||||||||||||| || |||||||| || || | ||||||||| ||||||| Sbjct: 671 agtcagctgtccagctctgctcaacaatctcacgcaccttcctgttgtactcgcgcttgt 612 Query: 380 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 439 |||| || ||||| | || ||||| ||||| ||||| ||||| ||||||||||| || | Sbjct: 611 tctcgctaaacatgcgcgctgcttctgaattagctggcgagtttgggtttggatcgcaga 552 Query: 440 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 499 |||| ||||| || ||||| | ||| || ||||| ||||| ||||| |||||||| || | Sbjct: 551 gcaaagactggattgaagtgagtatagccgcaacatcataaataggactccactgatttt 492 Query: 500 gtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagaga 559 | || || |||||||| || |||||||| |||||||||||||| || |||| ||| || | Sbjct: 491 gcagtatgtccaagcaaatactcccatcggcataaatatttggatggaacatcctggaaa 432 Query: 560 caaaacgaacagttggcggcttgttggggtaatc 593 ||| || || ||||| ||||||||||||||||| Sbjct: 431 taaaccgcaccgttggaggcttgttggggtaatc 398
>gb|DQ294271.1| Solanum tuberosum clone 147C03 ubiquitin carrier-like protein mRNA, complete cds Length = 788 Score = 155 bits (78), Expect = 2e-34 Identities = 225/274 (82%) Strand = Plus / Minus Query: 320 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 379 ||||||||||||||||||||||||| || || | ||| | || |||||||| | || | Sbjct: 527 agtcagcagtccagctctgctccacaatttctctcactctgcgattgtactcccttttat 468 Query: 380 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 439 ||||||||||||| | || |||||||| ||||| || |||||||||||||||||||||| Sbjct: 467 tctcactgaacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacaca 408 Query: 440 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 499 |||| |||||||| || || | ||| |||||||| ||||| || || ||||| || |||| Sbjct: 407 gcaatgactgaatggatgtaagtatagcagcaacatcataaattggactccattgattct 348 Query: 500 gtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagaga 559 | ||||||||||| || || || ||||| ||||||||||| || ||||||| | ||| | Sbjct: 347 gaagaatatccaaacatatacttccatccgcataaatattaggatgaaacattcgagaaa 288 Query: 560 caaaacgaacagttggcggcttgttggggtaatc 593 |||| || || || || ||||| ||||||||||| Sbjct: 287 caaaccgcacggtgggtggcttattggggtaatc 254
>gb|DQ191625.1| Solanum tuberosum unknown mRNA Length = 791 Score = 149 bits (75), Expect = 1e-32 Identities = 192/231 (83%) Strand = Plus / Minus Query: 320 agtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgt 379 ||||||||||||||||||||||||| || || | ||| | || |||||||| | || | Sbjct: 526 agtcagcagtccagctctgctccacaatttctctcactctgcgattgtactcccttttat 467 Query: 380 tctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacaca 439 ||||||||||||| | || |||||||| ||||| || |||||||||||||||||||||| Sbjct: 466 tctcactgaacatccgagctgcttccgagtttgcaggtgagttggggtttggatcacaca 407 Query: 440 gcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttct 499 |||| |||||||| || || | ||| |||||||| ||||| || || ||||| || |||| Sbjct: 406 gcaatgactgaatggatgtaagtatagcagcaacatcataaattggactccattgattct 347 Query: 500 gtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaaca 550 | ||||||||||| || || || ||||| ||||||||||| || ||||||| Sbjct: 346 gaagaatatccaaacatatacttccatccgcataaatattaggatgaaaca 296
>dbj|AK111549.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C14, full insert sequence Length = 2920 Score = 143 bits (72), Expect = 9e-31 Identities = 174/208 (83%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 2655 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 2596 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 || | | ||||||||| || || || || || || ||||||||||| || |||| ||| Sbjct: 2595 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatcgcaaagcagcgac 2536 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || || || | ||| ||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 2535 tggatggatgtgagtatagcagctacatcatatatggggctccactggttttgtagtata 2476 Query: 508 tccaagcagatgctcccatctgcataaa 535 || ||||| ||||||||||| ||||||| Sbjct: 2475 tctaagcatatgctcccatcagcataaa 2448
>dbj|AB026056.1| Nicotiana tabacum Ntubc2 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 784 Score = 141 bits (71), Expect = 4e-30 Identities = 287/359 (79%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||| || || ||||| || || || | |||||| || ||||||||||||||| Sbjct: 533 gtccagctctgttcaacaatctcgcgcaccttcctgttgtattcgcgcttgttctcactg 474 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 ||||| | || ||||| ||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct: 473 aacatgcgtgctgcttctgaattagctggcgagttaggatttggatcacagagcaaagac 414 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || ||||||| ||| ||||| || |||||||| || |||||||| || || | || Sbjct: 413 tggattgaagtcagtatagcagctacatcatatatgggactccactgattttgcaagatg 354 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 |||||||| || || ||||| || |||||||||||||| |||| || || | ||| || Sbjct: 353 tccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaataaatcgc 294 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 |||||||| || ||||| || ||||| |||| || || | || ||||| ||||||||| Sbjct: 293 acagttggtggtttgtttggataatcctctgagaattgaagtgtcagcttaaatgtgcct 234 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgtt 686 || ||||| || |||||||| || ||||| ||||| || ||||| ||||| || ||||| Sbjct: 233 ccatcccagggagtatcatcaggaccgaaaatgactgcattccatagcattatattgtt 175
>dbj|AB026055.1| Nicotiana tabacum Ntubc1 mRNA for ubiquitin-conjugating enzyme (E2), complete cds Length = 809 Score = 141 bits (71), Expect = 4e-30 Identities = 287/359 (79%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||| || || ||||| || || || | |||||| || ||||||||||||||| Sbjct: 535 gtccagctctgttcaacaatctcgcgcaccttcctgttgtattcacgcttgttctcactg 476 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggac 447 ||||| | || ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||| Sbjct: 475 aacatgcgtgctgcttctgaattagctggcgagttgggatttggatcacagagcaaagac 416 Query: 448 tgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaata 507 || || ||||||| ||| ||||| || |||||||| || ||||| || || || || || Sbjct: 415 tggattgaagtcagtatagcagctacatcatatatgggactccattgattttgcaggatg 356 Query: 508 tccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacga 567 |||||||| || || ||||| || |||||||||||||| |||| || || | ||| || Sbjct: 355 tccaagcaaatacttccatcagcgtaaatatttgggtggaacattctggaaataaatcgc 296 Query: 568 acagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaatgtgcct 627 |||||||| || ||||| || || || |||| || || | || ||||| ||||| ||| Sbjct: 295 acagttggtggtttgtttggatagtcctctgagaattgaagtgtcagcttaaatgtacct 236 Query: 628 ccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatgttgtt 686 || ||||| || |||||||| |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 235 ccatcccaaggagtatcatcagggccgaaaatgactgcattccatagcattatattgtt 177
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Minus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 117276 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 117217 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 117216 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 117157 Query: 437 acagcaaggactg 449 | |||| |||||| Sbjct: 117156 agagcagggactg 117144 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 451 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 510 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 116670 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 116611 Query: 511 aagcagatgctcccatctgcataaa 535 |||||||| || ||||||||||||| Sbjct: 116610 aagcagatacttccatctgcataaa 116586 Score = 89.7 bits (45), Expect = 1e-14 Identities = 55/57 (96%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgat 708 ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 112645 ccgaatatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgat 112590 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 ||||||||||||||| ||| |||||||| |||||| ||| || |||||||| ||||||| Sbjct: 116467 tatttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatctt 116408 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||| || | || |||||||| |||||| Sbjct: 116407 ctgtaaattgtagtgtcagcttgaacgtgcct 116376
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 32626631 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 32626690 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 32626691 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 32626750 Query: 437 acagcaaggactg 449 | |||| |||||| Sbjct: 32626751 agagcagggactg 32626763 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 451 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 510 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 32627237 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 32627296 Query: 511 aagcagatgctcccatctgcataaa 535 |||||||| || ||||||||||||| Sbjct: 32627297 aagcagatacttccatctgcataaa 32627321 Score = 89.7 bits (45), Expect = 1e-14 Identities = 55/57 (96%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgat 708 ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 32631262 ccgaatatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgat 32631317 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 ||||||||||||||| ||| |||||||| |||||| ||| || |||||||| ||||||| Sbjct: 32627440 tatttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatctt 32627499 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||| || | || |||||||| |||||| Sbjct: 32627500 ctgtaaattgtagtgtcagcttgaacgtgcct 32627531 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 tcccatggcgtatcatccgg 650 |||||||||||||||||||| Sbjct: 5334049 tcccatggcgtatcatccgg 5334068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 137 bits (69), Expect = 6e-29 Identities = 117/133 (87%) Strand = Plus / Plus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 32717141 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 32717200 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 32717201 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 32717260 Query: 437 acagcaaggactg 449 | |||| |||||| Sbjct: 32717261 agagcagggactg 32717273 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 451 atagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcc 510 ||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |||||| Sbjct: 32717747 atagaggtcaatatcgcagcaacatcatatatagggctccattgattttgtaggatatcc 32717806 Query: 511 aagcagatgctcccatctgcataaa 535 |||||||| || ||||||||||||| Sbjct: 32717807 aagcagatacttccatctgcataaa 32717831 Score = 89.7 bits (45), Expect = 1e-14 Identities = 55/57 (96%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgat 708 ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 32721772 ccgaatatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgat 32721827 Score = 71.9 bits (36), Expect = 3e-09 Identities = 78/92 (84%) Strand = Plus / Plus Query: 536 tatttgggtgaaacaccctagagacaaaacgaacagttggcggcttgttggggtaatctt 595 ||||||||||||||| ||| |||||||| |||||| ||| || |||||||| ||||||| Sbjct: 32717950 tatttgggtgaaacatccttgagacaaaccgaacaactggtggtttgttgggataatctt 32718009 Query: 596 ctgtaaactgcaaggtaagcttgaatgtgcct 627 ||||||| || | || |||||||| |||||| Sbjct: 32718010 ctgtaaattgtagtgtcagcttgaacgtgcct 32718041 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 tcccatggcgtatcatccgg 650 |||||||||||||||||||| Sbjct: 5333264 tcccatggcgtatcatccgg 5333283
>ref|XM_469944.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3633 Score = 131 bits (66), Expect = 3e-27 Identities = 111/126 (88%) Strand = Plus / Plus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||||||||||||||| ||||| |||||||| ||||||||||| |||| Sbjct: 3504 cttagtcggccgtccagctctgctccacaatctcgcggactttgcggttgtactcgcgct 3563 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 ||||||| ||||||| |||||| ||||| || ||||| || ||||| ||||||||||||| Sbjct: 3564 tgttctcgctgaacagtctggctgcttcggagtttgcaggggagtttgggtttggatcac 3623 Query: 437 acagca 442 | |||| Sbjct: 3624 agagca 3629
>ref|NM_126331.2| Arabidopsis thaliana ATUBC2; ubiquitin conjugating enzyme AT2G02760 (ATUBC2) mRNA, complete cds Length = 860 Score = 129 bits (65), Expect = 1e-26 Identities = 233/289 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 637 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 578 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 577 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 518 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 517 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 458 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 || ||||| |||||||| || |||||||| |||||||| ||||| || |||| || || Sbjct: 457 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 398 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgca 607 ||||| || || ||||| || || || || |||||||| | |||||||| Sbjct: 397 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgca 349
>emb|Y13031.1|ATUBC2 A.thaliana mRNA for ubiquitin conjugating enzyme UBC2 Length = 824 Score = 129 bits (65), Expect = 1e-26 Identities = 233/289 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 583 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 524 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 523 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 464 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 463 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 404 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 || ||||| |||||||| || |||||||| |||||||| ||||| || |||| || || Sbjct: 403 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 344 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgca 607 ||||| || || ||||| || || || || |||||||| | |||||||| Sbjct: 343 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgca 295
>gb|AY072479.1| Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 538 Score = 129 bits (65), Expect = 1e-26 Identities = 233/289 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 || ||||| |||||||| || |||||||| |||||||| ||||| || |||| || || Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgca 607 ||||| || || ||||| || || || || |||||||| | |||||||| Sbjct: 218 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgca 170
>gb|AF370558.1|AF370558 Arabidopsis thaliana putative ubiquitin-conjugating enzyme E2 (At2g02760; T20F6.10) mRNA, complete cds Length = 830 Score = 129 bits (65), Expect = 1e-26 Identities = 233/289 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 607 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 548 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 547 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 488 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 487 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 428 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 || ||||| |||||||| || |||||||| |||||||| ||||| || |||| || || Sbjct: 427 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 368 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgca 607 ||||| || || ||||| || || || || |||||||| | |||||||| Sbjct: 367 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgca 319
>emb|BX814055.1|CNS0ADOD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 804 Score = 129 bits (65), Expect = 1e-26 Identities = 290/365 (79%) Strand = Plus / Minus Query: 322 tcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttc 381 |||||||||||||| ||||| || | ||||| ||| | | || |||||| |||||| | Sbjct: 606 tcagcagtccagctttgctcaacaacatcacgcactctcctgtggtactcgcgcttgctt 547 Query: 382 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 441 || ||| |||| | ||||||||||| ||||| ||||| || || | || | ||| ||| Sbjct: 546 tcgctgtacatccgagcagcttccgagtttgcaggagaattcggataagggtaacagagc 487 Query: 442 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 501 |||||||| || || || | ||| ||||| || ||||| || || ||||||||||| ||| Sbjct: 486 aaggactggatggaggtaagtatagcagctacatcatagattggactccactggttttgt 427 Query: 502 agaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagagaca 561 ||||| ||||||||||| |||||||||||||||||||| || ||||||| || || ||| Sbjct: 426 agaatgtccaagcagatactcccatctgcataaatattaggatgaaacatccgtgacaca 367 Query: 562 aaacgaacagttggcggcttgttggggtaatcttctgtaaactgcaaggtaagcttgaat 621 || ||||| ||||| || || ||||| |||||||| | ||||||| | || ||||| Sbjct: 366 aaccgaactgttggtggtttattgggataatcttcagagaactgcagtgagagtttgaaa 307 Query: 622 gtgcctccgtcccatggcgtatcatccgggccgaagatgacggcgttccagagcatgatg 681 || ||||| |||||||| || ||||| || || || |||| || ||||||||||| ||| Sbjct: 306 gtacctccatcccatggtgtgtcatcaggcccaaatatgagagcattccagagcataatg 247 Query: 682 ttgtt 686 ||||| Sbjct: 246 ttgtt 242
>gb|DQ027017.1| Arabidopsis thaliana ubiquitinating enzyme (At2g02760) mRNA, complete cds Length = 459 Score = 129 bits (65), Expect = 1e-26 Identities = 233/289 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 458 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 399 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 398 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | ||| ||||| || || ||||| || ||||| ||||| Sbjct: 338 agcaatgactgaatggaggttagtatagcagcgacatcgtatattggactccattggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctagag 558 || ||||| |||||||| || |||||||| |||||||| ||||| || |||| || || Sbjct: 278 tggagaatgtccaagcatatactcccatcagcataaatgtttggatggaacatccgtgaa 219 Query: 559 acaaaacgaacagttggcggcttgttggggtaatcttctgtaaactgca 607 ||||| || || ||||| || || || || |||||||| | |||||||| Sbjct: 218 acaaaccgcactgttggtggtttatttggataatcttccgaaaactgca 170
>emb|AJ843121.1| Plantago major mRNA for Ubiquitin-conjugating enzyme (ubc2 gene) Length = 858 Score = 105 bits (53), Expect = 2e-19 Identities = 218/273 (79%) Strand = Plus / Minus Query: 318 ttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgctt 377 |||||| || ||||| || |||||||| |||||||| || || | |||||| || ||||| Sbjct: 599 ttagtcggctgtccaactttgctccacaatctcacgcaccttcctgttgtaatcacgctt 540 Query: 378 gttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcaca 437 ||| |||||||||| | ||||||||||| ||||| || || || || ||||||||||| Sbjct: 539 gttttcactgaacaaccgtgcagcttccgagtttgcaggtgaatttggatttggatcaca 480 Query: 438 cagcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggtt 497 |||| ||||| ||||| || | ||| ||||| || |||||||| || |||||||| || Sbjct: 479 gagcagcgactggatagatgtaagtattgcagctacatcatatattggactccactgatt 420 Query: 498 ctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacaccctaga 557 || || ||||||||||| || || ||||| |||||||| || || || |||| || || Sbjct: 419 ttgcaggatatccaagcaaatacttccatcagcataaatgttgggatggaacattctgga 360 Query: 558 gacaaaacgaacagttggcggcttgttggggta 590 | ||| || |||||||| |||||||| ||||| Sbjct: 359 tataaatcgcacagttggtggcttgttcgggta 327
>emb|AJ234842.1|HVU234842 Hordeum vulgare genomic DNA fragment; clone MWG2217 Length = 402 Score = 99.6 bits (50), Expect = 1e-17 Identities = 57/58 (98%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtttgtcgtgcggcgcgccgctgatc 709 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 74 ccgaagatgacggcgttccagagcatgatgttg-ttgtcgtgcggcgcgccgctgatc 18 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 625 cctccgtcccatggcgtatcatccgggc 652 |||||||||||||||||||||||||||| Sbjct: 296 cctccgtcccatggcgtatcatccgggc 269
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 316 ccttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgc 375 ||||||||||| ||||| ||||||||||| | || || ||| | || |||||||| ||| Sbjct: 100860 ccttagtcagctgtccaactctgctccacaacttcccgcactcttcgattgtactcacgc 100801 Query: 376 ttgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatca 435 ||||||||||||||||||| || ||||| || ||||| ||||| || ||||| |||||| Sbjct: 100800 ttgttctcactgaacattcgagccgcttcagagtttgcaggagaatttgggttgggatca 100741 Query: 436 cacagcaaggactg 449 || ||||| ||||| Sbjct: 100740 caaagcaatgactg 100727
>dbj|AP004950.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT42E10, TM0123, complete sequence Length = 79601 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 317 cttagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgct 376 ||||||| || ||||| ||||||||||| || || | ||| | ||||||||||| |||| Sbjct: 11165 cttagtctgctgtccaactctgctccacaatttccctcactctgcggttgtactcacgct 11224 Query: 377 tgttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcac 436 |||||||||| ||||||| || ||||| || ||||| |||||||| ||||| ||||||| Sbjct: 11225 tgttctcactaaacattcgagctgcttcggagtttgcaggagagtttgggttgggatcac 11284 Query: 437 acagcaaggactg 449 | ||||| ||||| Sbjct: 11285 aaagcaatgactg 11297 Score = 44.1 bits (22), Expect = 0.62 Identities = 58/70 (82%) Strand = Plus / Plus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||| || ||||||||||| |||||||| || |||| |||||||| || || || ||| Sbjct: 15395 gcagctacatcatatataggactccactgattttgtaatatatccaaacaaatacttcca 15454 Query: 526 tctgcataaa 535 ||||| |||| Sbjct: 15455 tctgcgtaaa 15464
>ref|NM_125648.3| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme AT5G62540 mRNA, complete cds Length = 877 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 715 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 656 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 655 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 596 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 595 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 536 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 535 agcaaatgcttccatcagcataaatgtttggatgaaaca 497
>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12, complete sequence Length = 187523 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1535 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 1476 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatc 434 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 1475 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 1429 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 599 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 540 Query: 526 tctgcataaa 535 || ||||||| Sbjct: 539 tcagcataaa 530
>gb|AC002521.3| Arabidopsis thaliana chromosome 2 clone T20F6 map CIC11A04, complete sequence Length = 81004 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 52358 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 52417 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 52418 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 52477 Query: 439 agcaaggactg 449 ||||| ||||| Sbjct: 52478 agcaatgactg 52488
>gb|AY039851.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 716 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 559 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 500 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 499 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 440 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 439 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 380 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 379 agcaaatgcttccatcagcataaatgtttggatgaaaca 341
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 4906950 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 4906891 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatc 434 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 4906890 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 4906844 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 4906014 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 4905955 Query: 526 tctgcataaa 535 || ||||||| Sbjct: 4905954 tcagcataaa 4905945
>emb|BX833570.1|CNS09ZB5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL62ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 781 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 632 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 573 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 572 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 513 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 512 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 453 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 452 agcaaatgcttccatcagcataaatgtttggatgaaaca 414
>emb|BX832888.1|CNS09YZQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZD01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 693 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 531 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 472 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 471 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 412 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 411 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 352 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 351 agcaaatgcttccatcagcataaatgtttggatgaaaca 313
>emb|BX833841.1|CNS09YNI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL7ZA01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 695 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 533 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 474 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 473 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 414 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 413 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 354 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 353 agcaaatgcttccatcagcataaatgtttggatgaaaca 315
>gb|AY085367.1| Arabidopsis thaliana clone 148141 mRNA, complete sequence Length = 682 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 557 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 498 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 497 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 438 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 437 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 378 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 377 agcaaatgcttccatcagcataaatgtttggatgaaaca 339
>gb|DQ027018.1| Arabidopsis thaliana ubiquitinating enzyme (At5g62540) mRNA, complete cds Length = 453 Score = 85.7 bits (43), Expect = 2e-13 Identities = 175/219 (79%) Strand = Plus / Minus Query: 332 agctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactgaaca 391 ||||||||||||||||||| ||||| | ||| || |||| || ||||||||||||| Sbjct: 445 agctctgctccacgatctcgattactttcctgttatattctcttttattctcactgaaca 386 Query: 392 ttctggcagcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaa 451 || ||||| || | || ||||| |||| |||||||| ||||| ||||| ||||||| Sbjct: 385 accttgcagcctctgcgttcgctggtgagtcagggtttgggtcacagagcaaagactgaa 326 Query: 452 tagaagtcaatatggcagcaacgtcatatatagggctccactggttctgtagaatatcca 511 | || || | | ||||||||||| || || |||||||||||||| || | ||||||| Sbjct: 325 ttgatgtgagaactgcagcaacgtcgtagatggggctccactggttttgcaagatatcca 266 Query: 512 agcagatgctcccatctgcataaatatttgggtgaaaca 550 |||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 265 agcaaatgcttccatcagcataaatgtttggatgaaaca 227
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 328 gtccagctctgctccacgatctcacggactttacggttgtactctcgcttgttctcactg 387 ||||||||||||||||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 179358 gtccagctctgctccactatctcacgaacttttcggttgtattcccgcttgttctcactg 179299 Query: 388 aacattctggcagcttccgaatttgctggagagttggggtttggatc 434 || | | ||||||||| || || || || || || ||||||||||| Sbjct: 179298 aataggcgggcagcttcagagttggcaggtgaatttgggtttggatc 179252 Score = 75.8 bits (38), Expect = 2e-10 Identities = 62/70 (88%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||| || |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||| Sbjct: 178422 gcagctacatcatatatggggctccactggttttgtagtatatctaagcatatgctccca 178363 Query: 526 tctgcataaa 535 || ||||||| Sbjct: 178362 tcagcataaa 178353
>gb|L19353.1|ATHUBIQUC Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC2) gene, complete cds Length = 2282 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||| ||||||||||| || || || | ||| |||||| | | ||||||||| |||||| Sbjct: 1606 tagtcggcagtccagctttgttcgacaacctcgcggactcttctgttgtactcgcgcttg 1547 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | ||||||||||||| ||||||||||||||||| ||||| || || || |||||||| Sbjct: 1546 ctttcactgaacattcgtgcagcttccgaatttgcaggagaattcggattaggatcacat 1487 Query: 439 agcaaggactg 449 ||||| ||||| Sbjct: 1486 agcaatgactg 1476
>gb|AC012188.2|F14L17 Sequence of BAC F14L17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 111686 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 |||||||| ||||| || || ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 58616 gcagcaacatcatagattggactccactggttttgtagaatgtccaagcagatactccca 58675 Query: 526 tctgcataaa 535 |||||||||| Sbjct: 58676 tctgcataaa 58685 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Plus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 58374 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 58433 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 58434 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 58493 Query: 439 agcaaggactg 449 ||||||||||| Sbjct: 58494 agcaaggactg 58504
>gb|L19351.1|ATHUBIQUA Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC1) gene, complete cds Length = 1887 Score = 83.8 bits (42), Expect = 7e-13 Identities = 63/70 (90%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 |||||||| ||||| || || ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 1466 gcagcaacatcatagattggactccactggttttgtagaatgtccaagcagatactccca 1407 Query: 526 tctgcataaa 535 |||||||||| Sbjct: 1406 tctgcataaa 1397 Score = 61.9 bits (31), Expect = 3e-06 Identities = 106/131 (80%) Strand = Plus / Minus Query: 319 tagtcagcagtccagctctgctccacgatctcacggactttacggttgtactctcgcttg 378 ||||||||||||||||| ||||| || | ||||| ||| | | ||||||||| |||||| Sbjct: 1708 tagtcagcagtccagctttgctcaacaacatcacgcactctcctgttgtactcgcgcttg 1649 Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 | || ||| |||| | ||||||||||| ||||| ||||| || || || || ||||| Sbjct: 1648 ctttcgctgtacatccgagcagcttccgagtttgcaggagaattcggattagggtcacag 1589 Query: 439 agcaaggactg 449 ||||||||||| Sbjct: 1588 agcaaggactg 1578
>gb|AY143805.1| Arabidopsis thaliana At5g62540/K19B1_15 mRNA, complete cds Length = 441 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 ||||||||||||| || ||||| || | || ||||| |||| |||||||| ||||| Sbjct: 398 ttctcactgaacaaccttgcagcctctgcgttcgctggtgagtcagggtttgggtcacag 339 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | | ||||||||||| || || |||||||||||||| Sbjct: 338 agcaaagactgaattgatgtgagaactgcagcaacgtcgtagatggggctccactggttt 279 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaaca 550 || | ||||||||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 278 tgcaagatatccaagcaaatgcttccatcagcataaatgtttggatgaaaca 227
>gb|AY048267.1| Arabidopsis thaliana AT5g62540/K19B1_15 mRNA, complete cds Length = 819 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 379 ttctcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacac 438 ||||||||||||| || ||||| || | || ||||| |||| |||||||| ||||| Sbjct: 668 ttctcactgaacaaccttgcagcctctgcgttcgctggtgagtcagggtttgggtcacag 609 Query: 439 agcaaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttc 498 ||||| |||||||| || || | | ||||||||||| || || |||||||||||||| Sbjct: 608 agcaaagactgaattgatgtgagaactgcagcaacgtcgtagatggggctccactggttt 549 Query: 499 tgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaaca 550 || | ||||||||||| ||||| ||||| |||||||| ||||| ||||||| Sbjct: 548 tgcaagatatccaagcaaatgcttccatcagcataaatgtttggatgaaaca 497
>gb|DQ200366.1| Solanum tuberosum clone 055E08 ubiquitin-conjugating enzyme-like protein mRNA, complete cds Length = 807 Score = 77.8 bits (39), Expect = 4e-11 Identities = 159/199 (79%) Strand = Plus / Minus Query: 400 gcttccgaatttgctggagagttggggtttggatcacacagcaaggactgaatagaagtc 459 ||||| ||||| ||||| || |||||||||||||||| || || ||||| || ||||| Sbjct: 452 gcttctgaattagctggcgaattggggtttggatcactgagtaaagactgtattgaagta 393 Query: 460 aatatggcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatg 519 | ||| ||||| || ||||||||||| |||||||| || || | || ||||| || || Sbjct: 392 agtatagcagctacatcatatataggactccactgattttgcaagatgtccaaacaaata 333 Query: 520 ctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggcggc 579 || ||||| |||||||||||||| || |||| || |||||||| | || |||||||| Sbjct: 332 cttccatcagcataaatatttggatggaacattctggagacaaagtgtacttttggcggc 273 Query: 580 ttgttggggtaatcttctg 598 ||||| || ||||| |||| Sbjct: 272 ttgttaggataatcctctg 254
>ref|XM_790883.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC591316), mRNA Length = 426 Score = 73.8 bits (37), Expect = 7e-10 Identities = 91/109 (83%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 ||||||||||||||||||||||| | ||||| ||||| | ||| |||||||||| | | Sbjct: 242 ttctgtagaatatccaagcagattcctccatcagcatatacattagggtgaaacatcttt 183 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaact 604 || ||||| || || || || || ||||||||||| ||||||||||||| Sbjct: 182 gatacaaagcgtactgtaggtggtttgttggggtactcttctgtaaact 134
>dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19B1 Length = 69927 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||||||||| || || |||||||||||||| || | ||||||||||| ||||| ||| Sbjct: 44954 gcagcaacgtcgtagatggggctccactggttttgcaagatatccaagcaaatgcttcca 44895 Query: 526 tctgcataaa 535 || ||||||| Sbjct: 44894 tcagcataaa 44885
>gb|L19352.1|ATHUBIQUB Arabidopsis thaliana 16kDa ubiquitin conjugating enzyme (UBC3) gene, complete cds and flanking regions Length = 2342 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 466 gcagcaacgtcatatatagggctccactggttctgtagaatatccaagcagatgctccca 525 ||||||||||| || || |||||||||||||| || | ||||||||||| ||||| ||| Sbjct: 1687 gcagcaacgtcgtagatggggctccactggttttgcaagatatccaagcaaatgcttcca 1628 Query: 526 tctgcataaa 535 || ||||||| Sbjct: 1627 tcagcataaa 1618
>ref|NM_204865.1| Gallus gallus ubiquitin-conjugating enzyme E2A (RAD6 homolog) (UBE2A), mRNA Length = 459 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtt 686 |||||||||||||||||||| | |||||||||||| Sbjct: 125 ccgaagatgacggcgttccacaccatgatgttgtt 91 Score = 48.1 bits (24), Expect = 0.040 Identities = 84/104 (80%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 ||||| |||||||||| || || || ||||||||||| | |||||| ||||||| || Sbjct: 281 ttctgaagaatatccagacatatactaccatctgcatagacatttggatgaaacatttta 222 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgt 599 |||||||| | |||||| || ||||| || || || |||||||| Sbjct: 221 gagacaaatctaacagtaggtggcttatttggatattcttctgt 178
>gb|AF120212.1|AF120212 Gallus gallus ubiquitin-conjugating enzyme mRNA, complete cds Length = 459 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 652 ccgaagatgacggcgttccagagcatgatgttgtt 686 |||||||||||||||||||| | |||||||||||| Sbjct: 125 ccgaagatgacggcgttccacaccatgatgttgtt 91 Score = 48.1 bits (24), Expect = 0.040 Identities = 84/104 (80%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 ||||| |||||||||| || || || ||||||||||| | |||||| ||||||| || Sbjct: 281 ttctgaagaatatccagacatatactaccatctgcatagacatttggatgaaacatttta 222 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgt 599 |||||||| | |||||| || ||||| || || || |||||||| Sbjct: 221 gagacaaatctaacagtaggtggcttatttggatattcttctgt 178
>ref|XM_752262.1| Ustilago maydis 521 hypothetical protein (UM01208.1) partial mRNA Length = 558 Score = 52.0 bits (26), Expect = 0.003 Identities = 32/34 (94%) Strand = Plus / Minus Query: 652 ccgaagatgacggcgttccagagcatgatgttgt 685 |||||||||||||||||||||| ||||| ||||| Sbjct: 125 ccgaagatgacggcgttccagatcatgaggttgt 92
>gb|AY190722.1| Pagrus major ubiquitin-conjugating enzyme E2A mRNA, complete cds Length = 592 Score = 50.1 bits (25), Expect = 0.010 Identities = 88/109 (80%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 |||||||| || ||||| || || || ||||||||||| | |||||| ||||||| | | Sbjct: 400 ttctgtaggatgtccaaacatatacttccatctgcatagacatttggatgaaacatcttt 341 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaact 604 || ||||| || || || || || ||||||||||| |||||||| |||| Sbjct: 340 gacacaaatcgtactgtggggggtttgttggggtattcttctgtgaact 292
>ref|XM_638368.1| Dictyostelium discoideum hypothetical protein (DDB0202520), partial mRNA Length = 459 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 406 gaatttgctggagagttggggtttggatcaca 437 ||||||||||||||||| || ||||||||||| Sbjct: 374 gaatttgctggagagtttggatttggatcaca 343
>ref|XM_947339.1| Theileria annulata strain Ankara ubiquitin-conjugating enzyme E2 (TA12340) partial mRNA Length = 489 Score = 48.1 bits (24), Expect = 0.040 Identities = 63/76 (82%) Strand = Plus / Minus Query: 475 tcatatatagggctccactggttctgtagaatatccaagcagatgctcccatctgcataa 534 ||||| |||||| |||| |||||||||| ||||||||| || ||| ||||| |||| Sbjct: 302 tcatacataggggtccattggttctgtaaaatatccaaacatatggaaccatcaaaataa 243 Query: 535 atatttgggtgaaaca 550 |||||||| ||||||| Sbjct: 242 atatttggatgaaaca 227
>gb|AC116960.2| Dictyostelium discoideum chromosome 2 map complement(1004496-821614) strain AX4, complete sequence Length = 182870 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 406 gaatttgctggagagttggggtttggatcaca 437 ||||||||||||||||| || ||||||||||| Sbjct: 144150 gaatttgctggagagtttggatttggatcaca 144119
>gb|BC071066.1| Xenopus laevis MGC78891 protein, mRNA (cDNA clone MGC:78891 IMAGE:4174331), complete cds Length = 935 Score = 46.1 bits (23), Expect = 0.16 Identities = 47/55 (85%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaaca 550 ||||| || ||||| || || ||||| ||||| ||||||| |||||||||||||| Sbjct: 352 ttctgaaggatatctaaacatatgctgccatcagcataaacatttgggtgaaaca 298
>ref|XM_390981.1| Gibberella zeae PH-1 chromosome 3 UBC1_COLGL Ubiquitin-conjugating enzyme E2-16 kDa (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Colletotrichum hard-s> (FG10805.1) partial mRNA Length = 420 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 483 agggctccactggttctgtagaatatccaagcagatgct 521 |||||||||||||| | |||||||||||||||||||| Sbjct: 261 agggctccactggtcacggagaatatccaagcagatgct 223
>gb|BC053256.1| Danio rerio ubiquitin-conjugating enzyme E2A (RAD6 homolog), mRNA (cDNA clone MGC:64109 IMAGE:6795152), complete cds Length = 1626 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||||| ||||||||||||| Sbjct: 243 atgacagcgttccagaccatgatgttgttt 214
>gb|BC077659.1| Xenopus tropicalis MGC89687 protein, mRNA (cDNA clone MGC:89687 IMAGE:7026370), complete cds Length = 1024 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaaca 550 ||||| ||||| ||||||| |||||||||||||| Sbjct: 364 atgctgccatcagcataaacatttgggtgaaaca 331
>emb|BX247946.6| Zebrafish DNA sequence from clone CH211-231B5 in linkage group 14, complete sequence Length = 156559 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||||| ||||||||||||| Sbjct: 139633 atgacagcgttccagaccatgatgttgttt 139604
>emb|BX821042.1|CNS0AA78 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 825 Score = 44.1 bits (22), Expect = 0.62 Identities = 106/134 (79%) Strand = Plus / Minus Query: 382 tcactgaacattctggcagcttccgaatttgctggagagttggggtttggatcacacagc 441 ||||||||||||| ||||| ||||||| ||| ||||| | || || |||||||| ||| Sbjct: 587 tcactgaacattcgtgcagcgtccgaatgtgcaggagaatgcggattaggatcacatagc 528 Query: 442 aaggactgaatagaagtcaatatggcagcaacgtcatatatagggctccactggttctgt 501 || |||||| | || || | ||| |||||||| || ||||| || || || ||||| || Sbjct: 527 aatgactgagtggaggtgagtatagcagcaacatcgtatatgggactgcattggttttgg 468 Query: 502 agaatatccaagca 515 ||||| | |||||| Sbjct: 467 agaatgtgcaagca 454
>ref|NM_001005124.1| Xenopus tropicalis MGC89687 protein (MGC89687), mRNA Length = 1024 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaaca 550 ||||| ||||| ||||||| |||||||||||||| Sbjct: 364 atgctgccatcagcataaacatttgggtgaaaca 331
>ref|NM_001002747.1| Danio rerio zgc:100921 (zgc:100921), mRNA Length = 2065 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||| ||||||||||||||| Sbjct: 225 atgacagcgttccacagcatgatgttgttt 196
>ref|NM_201273.1| Danio rerio ubiquitin-conjugating enzyme E2A (RAD6 homolog) (ube2a), mRNA Length = 1626 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||||| ||||||||||||| Sbjct: 243 atgacagcgttccagaccatgatgttgttt 214
>emb|CR761899.2| Xenopus tropicalis finished cDNA, clone TNeu104p10 Length = 964 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaaca 550 ||||| ||||| ||||||| |||||||||||||| Sbjct: 298 atgctgccatcagcataaacatttgggtgaaaca 265
>emb|AL590151.8| Zebrafish DNA sequence from clone RP71-46J2 in linkage group 14, complete sequence Length = 137129 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||||| ||||||||||||| Sbjct: 45703 atgacagcgttccagaccatgatgttgttt 45674
>gb|BC076409.1| Danio rerio zgc:100921, mRNA (cDNA clone MGC:100921 IMAGE:7145326), complete cds Length = 2065 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 658 atgacggcgttccagagcatgatgttgttt 687 ||||| |||||||| ||||||||||||||| Sbjct: 225 atgacagcgttccacagcatgatgttgttt 196
>gb|AC114640.11| Mus musculus chromosome 17, clone RP24-125I7, complete sequence Length = 190102 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 cataaatatttgggtgaaaca 550 ||||||||||||||||||||| Sbjct: 141822 cataaatatttgggtgaaaca 141802
>gb|BC044416.1| Danio rerio zgc:55512, mRNA (cDNA clone MGC:55512 IMAGE:2641752), complete cds Length = 1571 Score = 42.1 bits (21), Expect = 2.5 Identities = 87/109 (79%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 ||||| |||||||| | |||||| || ||||| ||||| | |||||| ||||||| | | Sbjct: 375 ttctgaagaatatctaggcagatactgccatcagcatacacatttggatgaaacatcttt 316 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaact 604 ||||| || | || ||||| ||||||||||| || || ||||| |||| Sbjct: 315 gagacgaacctcactgttggaggcttgttgggatattcctctgtgaact 267
>ref|XM_864331.1| PREDICTED: Bos taurus ubiquitin-conjugating enzyme E2A (RAD6 homolog), transcript variant 1 (UBE2A), mRNA Length = 459 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 260 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 201 Query: 577 ggctt 581 ||||| Sbjct: 200 ggctt 196
>ref|NM_199719.1| Danio rerio zgc:55512 (zgc:55512), mRNA Length = 1571 Score = 42.1 bits (21), Expect = 2.5 Identities = 87/109 (79%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagcagatgctcccatctgcataaatatttgggtgaaacacccta 555 ||||| |||||||| | |||||| || ||||| ||||| | |||||| ||||||| | | Sbjct: 375 ttctgaagaatatctaggcagatactgccatcagcatacacatttggatgaaacatcttt 316 Query: 556 gagacaaaacgaacagttggcggcttgttggggtaatcttctgtaaact 604 ||||| || | || ||||| ||||||||||| || || ||||| |||| Sbjct: 315 gagacgaacctcactgttggaggcttgttgggatattcctctgtgaact 267
>ref|XM_549217.2| PREDICTED: Canis familiaris similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC492095), mRNA Length = 893 Score = 42.1 bits (21), Expect = 2.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 523 ccatctgcataaatatttgggtgaaacaccctagagacaaa 563 ||||||||||| | |||||| ||||||| | |||||||||| Sbjct: 470 ccatctgcatagacatttggatgaaacatcttagagacaaa 430
>ref|XM_783067.1| PREDICTED: Strongylocentrotus purpuratus similar to Ubiquitin-conjugating enzyme E2 A (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (mHR6A) (LOC583142), partial mRNA Length = 256 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 580 ttgttggggtaatcttctgtaaact 604 ||||||||||| ||||||||||||| Sbjct: 212 ttgttggggtactcttctgtaaact 188
>ref|XM_968596.1| PREDICTED: Tribolium castaneum similar to CG4443-PA (LOC662505), mRNA Length = 822 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 522 cccatctgcataaatatttgggtgaaaca 550 |||||| ||||||||||| |||||||||| Sbjct: 349 cccatcagcataaatattagggtgaaaca 321
>gb|DQ430065.1| Sorghum propinquum locus pSB1736 genomic sequence Length = 735 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 653 aggtgttcatcaaccatttcg 673
>gb|DQ430064.1| Sorghum bicolor voucher PI585454 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430063.1| Sorghum bicolor voucher PI267539 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430062.1| Sorghum bicolor voucher PI267408 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430061.1| Sorghum bicolor voucher PI221607 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430060.1| Sorghum bicolor voucher PI152702 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430059.1| Sorghum bicolor voucher NSL92371 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430058.1| Sorghum bicolor voucher NSL87666 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430057.1| Sorghum bicolor voucher NSL77217 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430056.1| Sorghum bicolor voucher NSL77034 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430055.1| Sorghum bicolor voucher NSL56174 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430054.1| Sorghum bicolor voucher NSL56003 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430053.1| Sorghum bicolor voucher NSL55243 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430052.1| Sorghum bicolor voucher NSL51365 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430051.1| Sorghum bicolor voucher NSL51030 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430050.1| Sorghum bicolor voucher NSL50875 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|DQ430049.1| Sorghum bicolor voucher BTx623 locus pSB1736 genomic sequence Length = 738 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 656 aggtgttcatcaaccatttcg 676
>gb|AF419316.1|AF419316 Bos taurus RAD6-like protein HR6A (BHR6A) mRNA, partial cds Length = 372 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 230 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 171 Query: 577 ggctt 581 ||||| Sbjct: 170 ggctt 166
>gb|BC102100.1| Bos taurus cDNA clone MGC:127256 IMAGE:7946441, complete cds Length = 1441 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 401 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 342 Query: 577 ggctt 581 ||||| Sbjct: 341 ggctt 337
>gb|AF132075.1|AF132075 Bos taurus RAD6 homolog (BHR6A) gene, partial cds Length = 372 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 230 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 171 Query: 577 ggctt 581 ||||| Sbjct: 170 ggctt 166
>gb|AF132074.1|AF132074 Equus caballus RAD6 homolog (EHR6A) gene, partial cds Length = 378 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 233 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 174 Query: 577 ggctt 581 ||||| Sbjct: 173 ggctt 169
>gb|AF132073.1|AF132073 Sus scrofa RAD6 homolog (PHR6A) gene, partial cds Length = 378 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Minus Query: 517 atgctcccatctgcataaatatttgggtgaaacaccctagagacaaaacgaacagttggc 576 ||||| ||||||||||| | |||||| || |||| | |||||||||| | ||| ||||| Sbjct: 233 atgctaccatctgcatagacatttggatggaacatcttagagacaaatctaaccgttggt 174 Query: 577 ggctt 581 ||||| Sbjct: 173 ggctt 169
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence Length = 170353 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 530 cataaatatttgggtgaaaca 550 ||||||||||||||||||||| Sbjct: 10129 cataaatatttgggtgaaaca 10109
>gb|AY105667.1| Zea mays PCO062057 mRNA sequence Length = 843 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 42 aggtgttcatcaaccatttcg 62 ||||||||||||||||||||| Sbjct: 310 aggtgttcatcaaccatttcg 330
>emb|AL672036.6| Mouse DNA sequence from clone RP23-395P1 on chromosome X, complete sequence Length = 186034 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 tttaatgtttcatctgagaaa 241 ||||||||||||||||||||| Sbjct: 145117 tttaatgtttcatctgagaaa 145137
>emb|CR457456.7| Zebrafish DNA sequence from clone CH211-235F6 in linkage group 23, complete sequence Length = 146468 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 219 tgtttaatgtttcatctgag 238 |||||||||||||||||||| Sbjct: 11394 tgtttaatgtttcatctgag 11413
>gb|AC111092.10| Mus musculus chromosome 12, clone RP23-168O9, complete sequence Length = 211926 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 agtcagcagtccagctctgc 339 |||||||||||||||||||| Sbjct: 81299 agtcagcagtccagctctgc 81318
>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0009J13, from chromosome 3, complete sequence Length = 147205 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 tcccatggcgtatcatccgg 650 |||||||||||||||||||| Sbjct: 40217 tcccatggcgtatcatccgg 40236
>emb|AL353680.8| Human DNA sequence from clone RP11-252M21 on chromosome 13 Contains a novel FLJ31073 containing gene, six novel genes and a CpG island, complete sequence Length = 176930 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 aagcagatgctcccatctgc 530 |||||||||||||||||||| Sbjct: 116720 aagcagatgctcccatctgc 116739
>ref|XM_785611.1| PREDICTED: Strongylocentrotus purpuratus similar to ubiquitin-conjugating enzyme E2G 2 (LOC585800), mRNA Length = 1303 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ccatctgcataaatatttgg 542 |||||||||||||||||||| Sbjct: 292 ccatctgcataaatatttgg 273
>emb|X89226.1|OSLRK2GEN O.sativa DNA for LRK2 gene Length = 5555 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 3168 gaagatgacggcgttccaga 3187
>ref|NM_001030898.1| Gallus gallus similar to colony stimulating factor 3 receptor isoform c precursor; granulocyte colony stimulating factor receptor; CD114 antigen (LOC419620), mRNA Length = 2916 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcagtccagctctgctccac 344 |||||||||||||||||||| Sbjct: 85 gcagtccagctctgctccac 66
>emb|AJ851515.1| Gallus gallus mRNA for hypothetical protein, clone 4d22 Length = 2916 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 gcagtccagctctgctccac 344 |||||||||||||||||||| Sbjct: 85 gcagtccagctctgctccac 66
>gb|AC154826.2| Mus musculus BAC clone RP23-72D18 from chromosome 9, complete sequence Length = 150028 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 caactttctggcaatggccc 305 |||||||||||||||||||| Sbjct: 73341 caactttctggcaatggccc 73322
>gb|AC067793.9| Homo sapiens chromosome 15, clone RP11-552D14, complete sequence Length = 189722 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 atgcccctaaattcacaagg 109 |||||||||||||||||||| Sbjct: 118733 atgcccctaaattcacaagg 118714
>gb|AC025775.6| Homo sapiens chromosome 5 clone CTD-2299B9, complete sequence Length = 95782 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 tggggtttggatcacacagc 441 |||||||||||||||||||| Sbjct: 64899 tggggtttggatcacacagc 64918
>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete sequence Length = 143507 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 37201 gaagatgacggcgttccaga 37182
>ref|XM_625154.1| PREDICTED: Apis mellifera similar to ENSANGP00000019471 (LOC552779), mRNA Length = 1070 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 523 ccatctgcataaatatttgggtgaaaca 550 ||||||||||| |||||||| ||||||| Sbjct: 493 ccatctgcatagatatttggatgaaaca 466
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 29956504 gaagatgacggcgttccaga 29956485
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ttggggtttggatcacacag 440 |||||||||||||||||||| Sbjct: 1514495 ttggggtttggatcacacag 1514476
>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 202028 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 atgtttaatgtttcatctga 237 |||||||||||||||||||| Sbjct: 200659 atgtttaatgtttcatctga 200678
>gb|AC104429.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006P09, complete sequence Length = 153950 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 631 tcccatggcgtatcatccgg 650 |||||||||||||||||||| Sbjct: 54936 tcccatggcgtatcatccgg 54955
>dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1 gene for CLV1-like LRR receptor kinase, complete cds Length = 4500 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 2155 gaagatgacggcgttccaga 2174
>dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1 mRNA for CLV1-like LRR receptor kinase, complete cds Length = 3169 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 2069 gaagatgacggcgttccaga 2088
>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541C02 Length = 150660 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 32652 gaagatgacggcgttccaga 32633
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 152017 gaagatgacggcgttccaga 151998
>dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A06, full insert sequence Length = 3170 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 654 gaagatgacggcgttccaga 673 |||||||||||||||||||| Sbjct: 2069 gaagatgacggcgttccaga 2088
>gb|AC131338.4| Mus musculus BAC clone RP23-29O10 from 18, complete sequence Length = 203229 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tggagatgtttaatgtttca 232 |||||||||||||||||||| Sbjct: 41793 tggagatgtttaatgtttca 41774
>gb|AC156031.2| Mus musculus BAC clone RP24-531B21 from 9, complete sequence Length = 169736 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 ggatgcccctaaattcacaaggca 111 ||||| |||||||||||||||||| Sbjct: 104099 ggatgtccctaaattcacaaggca 104076
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 cgatctcacggactttacgg 363 |||||||||||||||||||| Sbjct: 1214288 cgatctcacggactttacgg 1214269
>gb|AC153621.5| Mus musculus 6 BAC RP23-272K20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215547 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 atgtttaatgtttcatctga 237 |||||||||||||||||||| Sbjct: 204334 atgtttaatgtttcatctga 204315
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 agtcagcagtccagctctgc 339 |||||||||||||||||||| Sbjct: 183532 agtcagcagtccagctctgc 183551
>gb|AC174761.1| Gasterosteus aculeatus clone VMRC26-231K14, complete sequence Length = 162397 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cccccttcccctgccttagt 322 |||||||||||||||||||| Sbjct: 139549 cccccttcccctgccttagt 139568
>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31 Contains the 3' end of the gene for a novel DnaJ domain-containing protein (KIAA0962, FLJ13743, FLJ12468), the AGMAT gene for agmatine ureohydrolase (agmatinase), a novel gene (FLJ34180), a novel pseudogene similar to Mus musculus ethanol induced 6 (Etohi6), a CD24 antigen (small cell lung carcinoma cluster 4 antigen) (CD24) pseudogene, the gene for DNA-damage inducible protein 2 (DDI2), the RSC1A1 gene for regulatory solute carrier protein family 1 member 1 and the 5' end of the gene for a novel RUN and PH domain-containing protein (KIAA0842), complete sequence Length = 170399 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 603 ctgcaaggtaagcttgaatg 622 |||||||||||||||||||| Sbjct: 118987 ctgcaaggtaagcttgaatg 119006
>dbj|AP003041.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-567M21, complete sequence Length = 188172 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 ttctgtagaatatccaagca 515 |||||||||||||||||||| Sbjct: 147522 ttctgtagaatatccaagca 147503 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,718,272 Number of Sequences: 3902068 Number of extensions: 5718272 Number of successful extensions: 105748 Number of sequences better than 10.0: 154 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 105189 Number of HSP's gapped (non-prelim): 521 length of query: 709 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 686 effective length of database: 17,143,297,704 effective search space: 11760302224944 effective search space used: 11760302224944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
