ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd1j24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2 155 1e-37
2RL19C_ARATH (P49693) 60S ribosomal protein L19-3 153 4e-37
3RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1 152 7e-37
4RL19_DROME (P36241) 60S ribosomal protein L19 121 2e-27
5RL19_RAT (P84100) 60S ribosomal protein L19 117 2e-26
6RL19_PONPY (Q5RB99) 60S ribosomal protein L19 117 2e-26
7RL19_MOUSE (P84099) 60S ribosomal protein L19 117 2e-26
8RL19_MACFA (Q8HXN9) 60S ribosomal protein L19 117 2e-26
9RL19_HUMAN (P84098) 60S ribosomal protein L19 117 2e-26
10RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19 117 2e-26
11RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19 117 3e-26
12RL19_BRARE (Q6P5L3) 60S ribosomal protein L19 115 2e-25
13RL19_ICTPU (Q90YU8) 60S ribosomal protein L19 114 3e-25
14RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specif... 112 1e-24
15RL19_CAEEL (O02639) 60S ribosomal protein L19 108 2e-23
16RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15) 104 3e-22
17RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33... 103 5e-22
18RL19_PYRHO (O59437) 50S ribosomal protein L19e 63 7e-10
19RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e 62 1e-09
20RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19) 60 8e-09
21RL19_METJA (P54043) 50S ribosomal protein L19e 48 2e-05
22RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E) 47 5e-05
23RL19_SULAC (O05639) 50S ribosomal protein L19e 42 0.002
24RL19_ARCFU (O28372) 50S ribosomal protein L19e 41 0.003
25RL19_AERPE (Q9YF93) 50S ribosomal protein L19e 39 0.014
26RL19_SULSO (Q9UX89) 50S ribosomal protein L19e 39 0.014
27NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6... 31 2.9
28NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1... 31 2.9
29RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24) 31 3.8
30POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocaps... 30 6.6
31RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3 30 8.6

>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2|
          Length = 209

 Score =  155 bits (391), Expect = 1e-37
 Identities = 80/125 (64%), Positives = 88/125 (70%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           SRAR  +EAK+KGRHSGYGKR+GTREARLPTKI              KYRE+KKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXR 310
           HDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+DQF                    R
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180

Query: 309 LAQGP 295
           LAQGP
Sbjct: 181 LAQGP 185



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>RL19C_ARATH (P49693) 60S ribosomal protein L19-3|
          Length = 208

 Score =  153 bits (387), Expect = 4e-37
 Identities = 79/125 (63%), Positives = 89/125 (71%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           SRAR+ + AK+KGRHSGYGKR+GTREARLPTK+             +KYRE KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXR 310
           HDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF                    R
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 309 LAQGP 295
           LA+GP
Sbjct: 181 LAKGP 185



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>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1|
          Length = 214

 Score =  152 bits (385), Expect = 7e-37
 Identities = 79/125 (63%), Positives = 87/125 (69%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           SRAR+   AK KGRHSGYGKR+GTREARLPTK+             +KYRE KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXR 310
           HDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF                    R
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180

Query: 309 LAQGP 295
           LA+GP
Sbjct: 181 LAKGP 185



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>RL19_DROME (P36241) 60S ribosomal protein L19|
          Length = 203

 Score =  121 bits (304), Expect = 2e-27
 Identities = 56/97 (57%), Positives = 72/97 (74%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           R R+  EA++KGRH G+GKR+GT  AR+PTK+             +KYR++KKID+H+YH
Sbjct: 62  RVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYH 121

Query: 486 DMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           D+Y+K KGN+FKNKRVLME IHK KAEK R K L+DQ
Sbjct: 122 DLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158



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>RL19_RAT (P84100) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_PONPY (Q5RB99) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_MOUSE (P84099) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_HUMAN (P84098) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19|
          Length = 196

 Score =  117 bits (294), Expect = 2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19|
          Length = 197

 Score =  117 bits (293), Expect = 3e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19|
          Length = 196

 Score =  115 bits (287), Expect = 2e-25
 Identities = 55/98 (56%), Positives = 71/98 (72%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YREAKKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YL+ KGN+FKNKR+LME IHK KA+KAR+K L+DQ
Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158



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>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19|
          Length = 196

 Score =  114 bits (284), Expect = 3e-25
 Identities = 54/98 (55%), Positives = 71/98 (72%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R R+   A++KGRH G GKR+GT  AR+P K+             R+YRE+KKID+HMY
Sbjct: 61  ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +YL+ KGN+FKNKR+LME IHK KA++AR+K LSDQ
Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQ 158



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>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein|
           V14) (22 kDa calmodulin-binding protein)
          Length = 186

 Score =  112 bits (280), Expect = 1e-24
 Identities = 58/98 (59%), Positives = 67/98 (68%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           SRAR  + AK+ GRH G G R GTREARLP+KI             +KYREAKKIDKH Y
Sbjct: 61  SRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSY 120

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
            ++YLK KGN+FKNKR L+E I KSK EK REK + DQ
Sbjct: 121 RELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQ 158



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>RL19_CAEEL (O02639) 60S ribosomal protein L19|
          Length = 198

 Score =  108 bits (269), Expect = 2e-23
 Identities = 52/97 (53%), Positives = 66/97 (68%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           RAR   EA++KGRH+GYGKRRGT  AR+P K              R+YR+AKK+DKH+YH
Sbjct: 62  RAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYH 121

Query: 486 DMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           ++YL+ KGN FKNK+ L+E I K K E  R K L+DQ
Sbjct: 122 ELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQ 158



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>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)|
          Length = 192

 Score =  104 bits (259), Expect = 3e-22
 Identities = 49/97 (50%), Positives = 66/97 (68%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           R R+ H AK+ GRH+GYGKR+GT EAR+P+ +             RKYRE+ KIDKH+YH
Sbjct: 61  RIRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYH 120

Query: 486 DMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
            +YL+ KGN FK+KR L+E I ++KAE  R K + +Q
Sbjct: 121 TLYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQ 157



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>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)|
          Length = 188

 Score =  103 bits (257), Expect = 5e-22
 Identities = 49/98 (50%), Positives = 69/98 (70%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           SR R   ++K++GRHSGYGKR+GTREARLP+++              KYR+A KIDKH+Y
Sbjct: 60  SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY 119

Query: 489 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 376
           H +Y + KGN FK+KR L+E I ++KA+  REK L+++
Sbjct: 120 HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEE 157



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>RL19_PYRHO (O59437) 50S ribosomal protein L19e|
          Length = 150

 Score = 63.2 bits (152), Expect = 7e-10
 Identities = 33/77 (42%), Positives = 42/77 (54%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           RAR  HE K+KGRH G G R+G + AR+  K              RK +E KKID+  Y 
Sbjct: 62  RARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYR 121

Query: 486 DMYLKVKGNMFKNKRVL 436
            +Y++ KG  FKNK  L
Sbjct: 122 MLYIRAKGGQFKNKHQL 138



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>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e|
          Length = 151

 Score = 62.4 bits (150), Expect = 1e-09
 Identities = 34/90 (37%), Positives = 46/90 (51%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           RAR  HE K+KGRH G G R+G + AR+  K              RK +E KKID+  Y 
Sbjct: 62  RARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYR 121

Query: 486 DMYLKVKGNMFKNKRVLMESIHKSKAEKAR 397
            +Y++ KG  FK+K  L   + +    K R
Sbjct: 122 MLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151



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>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)|
          Length = 150

 Score = 59.7 bits (143), Expect = 8e-09
 Identities = 31/77 (40%), Positives = 41/77 (53%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           RA+  HE K+KGRH G G R+G + AR+  K              RK +  KKID+  Y 
Sbjct: 62  RAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYR 121

Query: 486 DMYLKVKGNMFKNKRVL 436
            +Y++ KG  FKNK  L
Sbjct: 122 MLYIRAKGGQFKNKHQL 138



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>RL19_METJA (P54043) 50S ribosomal protein L19e|
          Length = 151

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 23/75 (30%), Positives = 38/75 (50%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R ++  E ++KGR  G G RRG   AR P K              ++ R++ KID+ +Y
Sbjct: 63  ARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVY 122

Query: 489 HDMYLKVKGNMFKNK 445
             +Y   KG  F+++
Sbjct: 123 RKLYRMAKGGAFRSR 137



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>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)|
          Length = 149

 Score = 47.0 bits (110), Expect = 5e-05
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R +   E K+KG+  G G RRG + AR P K              ++ RE +KI++  Y
Sbjct: 60  ARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSY 119

Query: 489 HDMYLKVKGNMFKNK 445
             +Y   KG  F+++
Sbjct: 120 RKLYRMAKGGAFRSR 134



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>RL19_SULAC (O05639) 50S ribosomal protein L19e|
          Length = 150

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = -2

Query: 657 RAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYHDMY 478
           R H+ + KG    +G R+G   AR   K              R  R+   IDKH Y  +Y
Sbjct: 66  RKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLY 125

Query: 477 LKVKGNMFKN----KRVLMESIHK 418
            + KGN FKN    K  L +  HK
Sbjct: 126 KRAKGNYFKNLSDVKSYLRQMGHK 149



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>RL19_ARCFU (O28372) 50S ribosomal protein L19e|
          Length = 149

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 21/74 (28%), Positives = 35/74 (47%)
 Frame = -2

Query: 669 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMY 490
           +R  +    K+KGR  G+G R+G + AR+P K              R+ +    +D+  Y
Sbjct: 63  ARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTY 122

Query: 489 HDMYLKVKGNMFKN 448
             +Y K KG  F++
Sbjct: 123 RILYRKAKGGEFRS 136



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>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e|
          Length = 155

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = -2

Query: 651 HEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYHDMYLK 472
           H  ++KGR  G G+R+G   ARL  K              R  R+ + ID+  Y  +Y+ 
Sbjct: 68  HLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYML 127

Query: 471 VKGNMFKN 448
            KG  F++
Sbjct: 128 AKGGTFRD 135



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>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e|
          Length = 151

 Score = 38.9 bits (89), Expect = 0.014
 Identities = 22/70 (31%), Positives = 34/70 (48%)
 Frame = -2

Query: 660 RRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYHDM 481
           R+    K +G+ SG   R+G + AR  +K              +  R+ K ID+H Y ++
Sbjct: 67  RKKRSLKSEGKKSG--SRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYREL 124

Query: 480 YLKVKGNMFK 451
           YLK KG  +K
Sbjct: 125 YLKTKGGNYK 134



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>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 9/50 (18%)
 Frame = +2

Query: 395 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFA 517
           +L  S   LWI +         +  LL+ N LPLT  +  WY+ L IF A
Sbjct: 263 TLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLA 312



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>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%)
 Frame = +2

Query: 395 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFAS 520
           +L  ++L LWI +         +  LL+ N LPLT   + WY+ LS   AS
Sbjct: 263 TLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIAS 313



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>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)|
          Length = 148

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 19/71 (26%), Positives = 27/71 (38%)
 Frame = -2

Query: 666 RARRAHEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXRKYREAKKIDKHMYH 487
           RAR   + +  G   G G R+G   AR  +K              R+ R+   +    Y 
Sbjct: 61  RARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYR 120

Query: 486 DMYLKVKGNMF 454
           D+Y K  G  F
Sbjct: 121 DLYDKAGGGEF 131



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>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;|
           Membrane glycoprotein E2; Membrane glycoprotein E1]
          Length = 1063

 Score = 30.0 bits (66), Expect = 6.6
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -3

Query: 359 PRARQAGRGRLPGGRRDWPRAP 294
           PR R+  RGR  G RRDW RAP
Sbjct: 59  PRRRRGNRGR--GQRRDWSRAP 78



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>RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3|
          Length = 213

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 11/47 (23%)
 Frame = -3

Query: 407 RRQERRPYLTSLRPSVPRARQAG--------RGRLPG---GRRDWPR 300
           R QER+P+  ++R +V RA++AG         GRL G    R +W R
Sbjct: 125 RLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVR 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,581,646
Number of Sequences: 219361
Number of extensions: 1058128
Number of successful extensions: 3129
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 2985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3120
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6484657212
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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